Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20persimilis_20[refseq_20GCF_5F000005195.2_202006-04-18] 12,838 sequences; 188,374,079 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq1635 670 0.0 seq1592 158 2e-33 >seq1635 Length=10282868 Score = 670 bits (742), Expect = 0.0 Identities = 1292/1888 (68%), Gaps = 36/1888 (2%) Strand=Plus/Minus Query 76770 TTCTTATCCAATGTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACATA 76829 ||||| || | ||||| || |||| | || |||||||| |||| ||| ||||| Sbjct 1117710 TTCTTGTCGACAGTAAATTGTATTGCGTTGGCGGCAGGTTTTGTGCGTAAATAATACATT 1117651 Query 76830 CCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTA 76889 || |||||||| || |||| | | ||||| ||| ||||| ||| || | Sbjct 1117650 CCGGTTTTTAGTCCAGCTTTCCAGGAGAAAAAATGTATGGATGTCAATTTTCCGTAGTTG 1117591 Query 76890 GGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCC 76949 || || |||| |||| ||| | |||||||||||||| || || || ||||||||||| Sbjct 1117590 GGCTCTGCTACGTGAACATTAAATGACTGACTTTGATCAATAAATGCACCTCTATCAGCA 1117531 Query 76950 GCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATA 77009 |||||||| || ||| ||| | ||||||||| | |||||| ||| | | | | Sbjct 1117530 GCCATTTTAATTGTGGATTTTACTGAAATTTCCCATACAGTTTTATAAA---GATCGCGA 1117474 Query 77010 TCATCT---GGAAG-GTTTG--TATTTTGAATGGAACCACCATCTG-ATATAATTGTATT 77062 | | | |||| |||| ||| ||||||||| || || ||| | || ||| |||| Sbjct 1117473 ACCTTTTGGGGAATAGTTTCAATATCTTGAATGGAGCC-CCTGCTGGAAATTATTTTATT 1117415 Query 77063 CTTTATATCATCATTCCACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGATTAAC 77122 || || ||||||| ||| || | | ||||||||| | || | | |||| |||| || Sbjct 1117414 TTTCATCTCATCATCCCATAAGTCCAATTCTGTTAAATCCCTCAATAAATGATGATTGAC 1117355 Query 77123 TATTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCAC 77182 | ||||||||| ||||| ||||||| | || |||||||| ||||||||||||| | Sbjct 1117354 CACTTGAAATTCACCAGATAATACTCGTCTCGTATAAATATTTGTGGTATATGGTTCGAA 1117295 Query 77183 AGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAA 77242 ||||| || || |||| |||||| |||||||| || || ||||| || || || || || Sbjct 1117294 TGATTCGTTATTACCCATAATTTGTGCAGTAGATGCTGTAGGCATCGGCGCTACTAACAA 1117235 Query 77243 ACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATC 77302 ||| || | || || || | || | || || || || ||||||||| || | Sbjct 1117234 CGAATTCCTAATTCCGTGCTTTTTAATGTCTTCCTTCAGGCTTTGCCAATCCCATAGGTT 1117175 Query 77303 TGAAGGTACAACATCCCAAAGATCGTATTGTAGAATTCCGTTACTAGCATATGA--TCCA 77360 | || |||||| | ||| |||||||||||||| || || || | || ||| Sbjct 1117174 CGTTGGAGTTTTATCCCACATATCATATTGTAGAATTCCCTTGCT--CACAGGACTTCCT 1117117 Query 77361 TTATATGTTTCATAAGGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGCTCCG 77420 | ||| |||||||| ||| | |||||| ||||||||||| ||||||| || || Sbjct 1117116 TCATAGGTTTCATATACTCCAAATTCTTCAGCAAGTTCACAACTAGCTTCCAGAGCCCCA 1117057 Query 77421 TAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAACGGA 77480 ||||||||||||| || || | | || | | ||||| || ||| | ||| Sbjct 1117056 AAATAAATTGTTTCAAATATTTGTTGGTTTAAAAGACCGGCTTCTTCGCTTTCATAGGGA 1116997 Query 77481 TAATGTAAAAGAATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTATGT 77540 || | | | ||| || || || ||||| || ||||| || ||||| || || | ||| Sbjct 1116996 AAACGCATTAAAATTAAAGCGTCAGCTAAACCTTGAACACCTATACCGATTGGACGATGC 1116937 Query 77541 CTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTATTG 77600 || |||||| | || |||||||| | || ||||| || |||||||||||||| || Sbjct 1116936 CTTAAATTGGACTTCTTGGCTTCTGGCAAGGGGTAATAGTTGATGTCTATAATTTTGTTA 1116877 Query 77601 AGATTTCTAACAACTACTTTAACCACGTCCTTTAGTTTAAGAAAATCAAA---TCTTCCA 77657 |||||| | |||| ||| || || |||| ||| |||||| | | || | Sbjct 1116876 AGATTTTTGGCAACAGTTTTGGTTACTTCTTTTAATTTTTTGAAATCATACGTTTTTTCT 1116817 Query 77658 TCTATAACAAACATGTTCAAAGCTATAGATGCTAGATTACAAACTGCTACCTCATTAGCG 77717 | | || |||||||||| ||||| || |||| ||| || || || ||||||| || Sbjct 1116816 GGTGTTACGAACATGTTCAGTGCTATGGAAGCTAAATTGCAGACAGCGACCTCATCAGGT 1116757 Query 77718 TTGGCATATTGTATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGATTTTGT 77777 | || | | || || ||||||| |||||| ||||| || ||||| | ||||||| Sbjct 1116756 GCTGAGTACTCGACAATTTCTGTACATAAATTACTGCATTTAATGGTGCCAACATTTTGT 1116697 Query 77778 TGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAATC 77837 || ||||||||| |||| || || |||||| |||| || | || | || || || | Sbjct 1116696 TGATTGCTCTTTCTATTACAGGAATCCTTAAAAAGCATGTATGGGTTACCAGTCTCCACT 1116637 Query 77838 TGTGATTCGATAATAGATTTCCAGACGACTCTAGCTTTTA-TCATAGATTTGTATCGCCT 77896 || ||||| ||||||| ||| | | |||| | | | |||| | | || | Sbjct 1116636 TGCGATTCTATAATAGCAAACCATAAAGCCTGGGCTTCCACTGTTCGATTCGCA-CGTCC 1116578 Query 77897 CTCTCTTTCATATTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCC 77956 ||| ||||||| ||| ||| |||||||| || ||||||||||| | | || Sbjct 1116577 TTCTTGCTCATATTTGACATAGAGCTCTTCAAATTTTTCGCCCCAAACATCTTGAAGGCC 1116518 Query 77957 AGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAA 78016 ||| |||| || ||| |||||||| |||||| ||| | ||| ||| |||||||| || Sbjct 1116517 AGGACATTTATGTGGACACATCAACGACCAGCTTTCATTTGCCTCAACACGTTTCATGAA 1116458 Query 78017 GAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGT 78076 |||||||| ||||||||||| ||| ||||| || | ||| | |||||| ||||| || Sbjct 1116457 AAGATCAGGAATCCATAGAGCGTAAAAAAGATCACGTGCTCTGTTTTCTTCTTTTCCAGT 1116398 Query 78077 ATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATTGC 78136 || |||| || || | |||||| | || ||| |||||||| || |||| ||| || || Sbjct 1116397 GTTTCTTTTGAGGTCTAAAAACTCAAAAACATCTGAATGCCAGGGCTCTAAATAAATAGC 1116338 Query 78137 CATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAAC 78196 | | ||||||| ||| |||||||||||| | ||||| || |||||| |||| Sbjct 1116337 AAAGGCACCAGGTCTTTTTCCACCTCCCTGATCAACATATCGTGCCACATTATTAAAAAC 1116278 Query 78197 TCTCAACATTGGAA-TAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCAC 78255 ||| | |||||||| |||| || || || || || || |||||| | || | | || Sbjct 1116277 TCTTAGCATTGGAACTAAT-CCATTCGACGTACCGTTCGTTCCACATATGGATGTGCCTT 1116219 Query 78256 TTGCGCGAATATTACTAATGGATAT----CCCTATTCCTCCTGCCATCTTAGATATTAGA 78311 | || ||||| |||| | || || ||||| ||||| ||| || || || Sbjct 1116218 TAGCACGAAT----GCAATGAACATTAAGTCCAATTCCACCTGCTGACTTGGAAATCAGT 1116163 Query 78312 GCGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCC---ATCATGTTAAGA 78368 || || ||| | || | | ||||| || || || |||| |||| | | | Sbjct 1116162 GCACATTGTTCAACTGATTTAAAAATACCTTCAAT--TG-AATCCGAATTCATTGTCAAA 1116106 Query 78369 AGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCA 78428 |||||||| |||| |||| | || ||| | ||| ||| | || || || ||| Sbjct 1116105 AGAAAACATGAGGACAATTGAGGTCGATTTGTTGCAGCAGCAAAAAGCGTTGGCGAGGCA 1116046 Query 78429 TGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTATGTCCCAT 78488 |||||||| || |||||| ||||| ||||| ||||| | || | || || || | Sbjct 1116045 TGCGTAAAATATCGTTCAGACAGTAGGTTGTAAGTTTCCACTGCCGCATCAATATCGTCT 1115986 Query 78489 TGATGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATTA 78548 |||||| || | || || ||||||| ||| || || || | ||| | | || | Sbjct 1115985 CCATGAATACCAAGAGCGACGCGCATCAGCATGTGTTGTGGACGTTCTGCAATTTTCCCA 1115926 Query 78549 TTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAG 78608 ||||| || | | || || || | || ||||| ||||||||||| || ||| Sbjct 1115925 TTTATCTTAAGTAGATAGGAACGCTCGAGCGTCTTAAATCCAAAATAGTTATAACCAAAA 1115866 Query 78609 TCTCTCTCGTAAATAATAACAGAATTTA 78636 |||| || ||||||||| | || |||| Sbjct 1115865 TCTCGGTCATAAATAATAGCGGAGTTTA 1115838 >seq1592 Length=614636 Score = 158 bits (174), Expect = 2e-33 Identities = 443/670 (66%), Gaps = 15/670 (2%) Strand=Plus/Plus Query 48010 CACAATTCATTCCTATAAGTTTAACTGGTAGAGCCTCCGTAAGAAACTCTTGTTCGATAG 48069 |||| ||||| || || | || || || || || || || || ||||| || ||||| Sbjct 387547 CACAGTTCATGCCAATCAAATTGACGGGCAGGGCTTCAGTGAGGAACTCCTGCTCGATTT 387606 Query 48070 TGACAGCATCCACTATTATC--GATGTTACCGTTTCCTCACTTGGTGGATACAACAAATG 48127 ||||||||| || ||| |||| | | | | || | | || | | || | ||| Sbjct 387607 CCACAGCATCCCTGATGATCTCGATGATGC-GCTCCCGCT-TGGGCCGCTGCACTAGATG 387664 Query 48128 TTTAAACATTAAACATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTT 48187 | | |||| | ||||| || || ||||||||||| || | || | ||||| Sbjct 387665 GTGATACATGAGCACCGCAAAGTCGCAGTGAAGACCTTCGTCACGGGAGATCAGCTCGTT 387724 Query 48188 AGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGA 48247 || || || ||||||||||| || ||||| || || |||||||| || | || |||| Sbjct 387725 GGAGAAGGTCAGACCGGGCATGAGACCACGCTTCTTCAGCCAAAAGATCGAGGC-AAAGC 387783 Query 48248 T-CCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGG 48306 | ||| |||||| || ||||| ||||||||||| || ||| | ||| | | ||| Sbjct 387784 TGCCACTAAAGAAGATTCCTTCCACGGCCGCAAAGGCAATAATACGCTCGGCAAAGTTGG 387843 Query 48307 C----TTCGTTGTGTATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATT 48362 | |||| | |||||| ||||| || ||||| ||||||| ||||| Sbjct 387844 CCGATTTCGAGGA-TATCCAGGACATGGCCCAGTCCGCCTTGCGCTTTACAGCCGGCATG 387902 Query 48363 GTTTCTATAGCATTAAAGAGAAAGtttttttCATT--GCTATCTTTAACGTAAGTATCTA 48420 || || |||||||| || | ||| || | ||| | | | ||| || || | Sbjct 387903 GTCTCAATAGCATTGAACAAGTAGTCGCGCTCCTGCGGCTCCCGT--ATGTAGGTGTCAA 387960 Query 48421 TTAAAAGACTATACATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAAC 48480 | | | || ||||| |||||||| | ||| || || || ||||| || ||||| || | Sbjct 387961 TGAGCACGCTGTACATCTCGGAGTGCACATTCTCCATGGCTATCTGGAAGCCGTAGAAGC 388020 Query 48481 ATCTCGCTTCTGTGATCTGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTA 48540 | | || ||||||||||| |||||| || ||| || || |||||||||| || || | Sbjct 388021 AACGTGCCTCTGTGATCTGCACCTCCTGACTAAAGCGCTCGACCAAATTCTCGTTAACAA 388080 Query 48541 TTCCATCACTAGCAGCAAAAAATGCTAATACATGTTTAATAAAATATTTTTCGTTGGAAG 48600 | || || ||||| || || || | ||||| ||||| || |||||| || Sbjct 388081 TGCCGTCCGAGGCAGCGAAGAAGGCCAGCACATGGGAGATAAAGTAGCGCTCGTTGTCAG 388140 Query 48601 TCAGTTTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATG 48660 | || |||||| | || || |||| ||| || ||||| | ||||| || | Sbjct 388141 TGAGACGGGCCCAGTCCGTCGCGTCCTTCGATAGATCCACCTCTTCCACGGTCCAGAAGG 388200 Query 48661 ATGCCTCTGC 48670 | || || || Sbjct 388201 AGGCTTCCGC 388210 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694557323024320