Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20persimilis_20[refseq_20GCF_5F000005195.2_202006-04-18] 12,838 sequences; 188,374,079 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq1635 655 0.0 >seq1635 Length=10282868 Score = 655 bits (726), Expect = 0.0 Identities = 1269/1854 (68%), Gaps = 34/1854 (2%) Strand=Plus/Minus Query 75398 GCTGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAA 75457 || |||||||| |||| ||| ||||| || |||||||| || |||| | | ||| Sbjct 1117677 GCAGGTTTTGTGCGTAAATAATACATTCCGGTTTTTAGTCCAGCTTTCCAGGAGAAAAAA 1117618 Query 75458 TGCATGCTTGTTAGTTTGGAATAACTCGGATCGGCTATATGAATATTCATCGACTGACTT 75517 || ||| ||| | ||| || | || || |||| |||| ||| | ||||||||| Sbjct 1117617 TGTATGGATGTCAATTTTCCGTAGTTGGGCTCTGCTACGTGAACATTAAATGACTGACTT 1117558 Query 75518 TGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCC 75577 ||||| || || || ||||||||||| |||||||| || ||| ||| | ||||||| Sbjct 1117557 TGATCAATAAATGCACCTCTATCAGCAGCCATTTTAATTGTGGATTTTACTGAAATTTCC 1117498 Query 75578 CAAATAGTTTTGAAAACTTGTTTGATATCATCT---GGAAGATTTG---TATTTTGAATG 75631 || | |||||| ||| | | | | | | | |||| | || ||| ||||||| Sbjct 1117497 CATACAGTTTTATAAA---GATCGCGAACCTTTTGGGGAATAGTTTCAATATCTTGAATG 1117441 Query 75632 GATCCGCCATCAGATATAATTGTATTCTTGATCTCATCATTCCACAATTTTCTCTCGGTT 75691 || || | || || ||| |||| || |||||||||| ||| || | || ||| Sbjct 1117440 GAGCCCCTGCTGGAAATTATTTTATTTTTCATCTCATCATCCCATAAGTCCAATTCTGTT 1117381 Query 75692 AAAACTCTAAGGAGATGAGGATTAACAATTTGAAATTCTCCAGACAATACTCTTCGAGTG 75751 ||| | || | | |||| |||| || | ||||||||| ||||| ||||||| || || Sbjct 1117380 AAATCCCTCAATAAATGATGATTGACCACTTGAAATTCACCAGATAATACTCGTCTCGTA 1117321 Query 75752 TAAATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTTGAA 75811 |||||||| ||||||||||||| | ||||| || || |||| |||||| ||||| || Sbjct 1117320 TAAATATTTGTGGTATATGGTTCGAATGATTCGTTATTACCCATAATTTGTGCAGTAGAT 1117261 Query 75812 GCAGTCGGCATAGGTGCCACCAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCT 75871 || || ||||| || || || || || ||| || | || || || | || | || Sbjct 1117260 GCTGTAGGCATCGGCGCTACTAACAACGAATTCCTAATTCCGTGCTTTTTAATGTCTTCC 1117201 Query 75872 TTTAGATATTTCCAATCCCAAAGATCTGATGGTACAACATCCCAGAGATCGTATTGTAGA 75931 || || || ||||||||| || | | ||| |||||| | ||| ||||||||| Sbjct 1117200 TTCAGGCTTTGCCAATCCCATAGGTTCGTTGGAGTTTTATCCCACATATCATATTGTAGA 1117141 Query 75932 ATTCCGTTGCTAGCATATGA--TCCATTATATGTTTCGTAAGTCCCGTCCTTTTCAGCTA 75989 ||||| ||||| || | || ||| | ||| ||||| || || | |||||| | Sbjct 1117140 ATTCCCTTGCT--CACAGGACTTCCTTCATAGGTTTCATATACTCCAAATTCTTCAGCAA 1117083 Query 75990 GTTCGCAACTCGCCTCTAACGCACCGTAATAAATTGTTTCGAAAATCTTCTT--ATTAAG 76047 |||| ||||| || || | || || ||||||||||||| || || || || |||| Sbjct 1117082 GTTCACAACTAGCTTCCAGAGCCCCAAAATAAATTGTTTCAAATAT-TTGTTGGTTTAAA 1117024 Query 76048 ATCTTGCGCTTCAAGACTATCAAAAGGATAATGTAAAAGAATAAATGCATCTGCTAGTCC 76107 | | ||||| || ||| | ||| || | | | ||| || || || |||| || Sbjct 1117023 AGACCG-GCTTCTTCGCTTTCATAGGGAAAACGCATTAAAATTAAAGCGTCAGCTAAACC 1116965 Query 76108 CTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGAAATTTCAGCTTCTGGAATAGG 76167 ||||| || ||||| || || | ||| || |||||| | | |||||||| | || Sbjct 1116964 TTGAACACCTATACCGATTGGACGATGCCTTAAATTGGACTTCTTGGCTTCTGGCAAGGG 1116905 Query 76168 GTAATAATTAATATCTATAATTTTATTGAGATTTCTGACAACTACTTTAACCACGTCCTT 76227 |||||| || || ||||||||||| || |||||| || |||| ||| || || || Sbjct 1116904 GTAATAGTTGATGTCTATAATTTTGTTAAGATTTTTGGCAACAGTTTTGGTTACTTCTTT 1116845 Query 76228 TAGTTTGAGAAAATCAAA---TTTTCCATCTATCACAAACATATTAAGAGCTATAGATGC 76284 || ||| |||||| | |||| | | | || ||||| || || ||||| || || Sbjct 1116844 TAATTTTTTGAAATCATACGTTTTTTCTGGTGTTACGAACATGTTCAGTGCTATGGAAGC 1116785 Query 76285 TAGATTACAAACGGCTACCTCATTAGCATTGGCATATTGTATTATCTCCGTGCATAGATT 76344 || ||| || || || ||||||| || | || | | || || || |||| ||| Sbjct 1116784 TAAATTGCAGACAGCGACCTCATCAGGTGCTGAGTACTCGACAATTTCTGTACATAAATT 1116725 Query 76345 ACTACACTTGATAGTTCCAAGATTTTGTTGGTTGCTCTTTTTGTTACATGAGTCCTTATA 76404 ||| || || || || |||| ||||||||| ||||||||| | ||||| || |||||| | Sbjct 1116724 ACTGCATTTAATGGTGCCAACATTTTGTTGATTGCTCTTTCTATTACAGGAATCCTTAAA 1116665 Query 76405 AAGAACAAACGGAGTTCCAGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCT 76464 ||| | | || | ||||| || | || ||||| ||||||| ||| | | Sbjct 1116664 AAGCATGTATGGGTTACCAGTCTCCACTTGCGATTCTATAATAGCAAACCATAAAGCCTG 1116605 Query 76465 AGCTTTTA-TTATAGATTTGTA--TCGCTTCTCTCTTTCATATTGTGTATATAACCGTTC 76521 |||| | | | |||| | | || ||||| | ||||||| ||| | | ||| Sbjct 1116604 GGCTTCCACTGTTCGATTCGCACGTC-CTTCTTGC--TCATATTTGACATAGAGCTCTTC 1116548 Query 76522 AAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGACCA 76581 ||||| || ||||||||||| | | |||||||||| || ||||||||||| ||||| Sbjct 1116547 AAATTTTTCGCCCCAAACATCTTGAAGGCCAGGACATTTATGTGGACACATCAACGACCA 1116488 Query 76582 CTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAG 76641 ||| | ||| ||| |||||||| || |||||||| ||||||||||| ||| || Sbjct 1116487 GCTTTCATTTGCCTCAACACGTTTCATGAAAAGATCAGGAATCCATAGAGCGTAAAAAAG 1116428 Query 76642 ATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATAAT 76701 ||| || | ||| |||||| ||||| || || |||| || |||| ||||| | || Sbjct 1116427 ATCACGTGCTCTGTTTTCTTCTTTTCCAGTGTTTCTTTTGAGGTCTAAAAACTCAAAAAC 1116368 Query 76702 ATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCCTG 76761 ||| |||||||| || |||| ||| || || | |||| |||| ||| ||||||||| Sbjct 1116367 ATCTGAATGCCAGGGCTCTAAATAAATAGCAAAGGCACCAGGTCTTTTTCCACCTCCCTG 1116308 Query 76762 ATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAA-TAATGCCGTTAGATG 76820 ||| | ||||| || |||||| ||||||| | |||||||| |||| || || || | Sbjct 1116307 ATCAACATATCGTGCCACATTATTAAAAACTCTTAGCATTGGAACTAAT-CCATTCGACG 1116249 Query 76821 TACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGATAGGCCTA 76880 |||| || |||||| | || | | || |||||||| | || | || || | Sbjct 1116248 TACCGTTCGTTCCACATATGGATGTGCCTTTAGCACGAATGCAATGAACATTAAGTCCAA 1116189 Query 76881 TTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCTA 76940 |||| ||||| || || || || ||||| ||| | || | | | || || || | Sbjct 1116188 TTCCACCTGCTGACTTGGAAATCAGTGCACATTGTTCAACTGATTTAAAAATACCTTCAA 1116129 Query 76941 TACTATC---ATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTC 76997 | ||| || ||| ||| || ||||||||| |||| |||| | || ||| Sbjct 1116128 TTGAATCCGAATTCAT--TGTCAA-AAGAAAACATGAGGACAATTGAGGTCGATTTGTTG 1116072 Query 76998 CTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTATG 77057 | ||| ||| | || || || ||||| || || || |||||| ||||| ||||| | Sbjct 1116071 CAGCAGCAAAAAGCGTTGGCGAGGCATGCGTAAAATATCGTTCAGACAGTAGGTTGTAAG 1116012 Query 77058 TTTCAATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAACATAT 77117 |||| | | || || ||||| | |||||| || | |||||| ||||||| ||| | Sbjct 1116011 TTTCCACTGCCGCATCAATATCGTCTCCATGAATACCAAGAGCGACGCGCATCAGCATGT 1115952 Query 77118 GCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTT 77177 | || || |||||| || | || |||||| || | | || || || | || | Sbjct 1115951 GTTGTGGACGTTCTGCAATTTTCCCATTTATCTTAAGTAGATAGGAACGCTCGAGCGTCT 1115892 Query 77178 TAAAACCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACCGAATTTA 77231 |||| ||||||||||| || ||| |||| || ||||||||| | || |||| Sbjct 1115891 TAAATCCAAAATAGTTATAACCAAAATCTCGGTCATAAATAATAGCGGAGTTTA 1115838 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712819991852160