Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20persimilis_20[refseq_20GCF_5F000005195.2_202006-04-18] 12,838 sequences; 188,374,079 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq3819 178 3e-39 seq1604 168 2e-36 seq1628 159 8e-34 seq1619 150 4e-31 seq1635 120 7e-22 >seq3819 Length=1025 Score = 178 bits (196), Expect = 3e-39 Identities = 160/201 (80%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 |||||||||||||| ||||| || |||||||| || ||||| ||||||||| || ||| Sbjct 205 CAAATTTTCGTGAAGACTCTGACTGGAAAAACTATTACCCTGGAGGTGGAACCTTCTGAC 264 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| |||||||| ||| ||||| |||||||| || |||||||| || |||||||| Sbjct 265 ACCATTGAGAACGTGAAAGCCAAGATCCAGGACAAGGAGGGAATCCCCCCAGACCAGCAG 324 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || |||||||| || || ||||| |||||||| | |||||| | || || ||| || Sbjct 325 CGTCTCATCTTCGCTGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCGGACTACAACATC 384 Query 178104 CAAAAAGAATCAACACTGCAT 178124 || || || || || || ||| Sbjct 385 CAGAAGGAGTCGACTCTCCAT 405 >seq1604 Length=992631 Score = 168 bits (186), Expect = 2e-36 Identities = 158/201 (79%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 |||||||| |||||||| | || |||||||| |||||||| |||||||| || ||| Sbjct 939708 CAAATTTTTGTGAAAACCTTGACCGGAAAAACCATCACCCTGGAGGTGGAGCCATCCGAC 939767 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| |||||||| || ||||| |||||||| || |||||||| || |||||||| Sbjct 939768 ACCATTGAGAACGTGAAGGCCAAGATCCAGGACAAGGAGGGAATCCCCCCTGACCAGCAG 939827 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||||||||| || ||||| || ||||| | |||||| | || || ||| || Sbjct 939828 CGTCTCATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGCACTCTTTCGGACTACAACATC 939887 Query 178104 CAAAAAGAATCAACACTGCAT 178124 || || || || || |||||| Sbjct 939888 CAGAAGGAGTCGACTCTGCAT 939908 Score = 165 bits (182), Expect = 2e-35 Identities = 157/201 (78%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || |||||||| | || |||||||| |||||||| |||||||| || ||| Sbjct 940164 CAAATCTTTGTGAAAACCTTGACCGGAAAAACCATCACCCTGGAGGTGGAGCCATCCGAC 940223 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| |||||||| || ||||| |||||||| || |||||||| || |||||||| Sbjct 940224 ACCATTGAGAACGTGAAGGCCAAGATCCAGGACAAGGAGGGAATCCCCCCAGACCAGCAG 940283 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||||||||| || ||||| || ||||| | |||||| | || || ||| || Sbjct 940284 CGTCTCATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGCACTCTTTCGGACTACAACATC 940343 Query 178104 CAAAAAGAATCAACACTGCAT 178124 || || || || || |||||| Sbjct 940344 CAGAAGGAGTCGACTCTGCAT 940364 Score = 156 bits (172), Expect = 1e-32 Identities = 161/210 (77%), Gaps = 3/210 (1%) Strand=Plus/Plus Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974 ||||||| | || || |||||||| | || |||||||| |||||||| |||||||| Sbjct 939474 AAAATGC---AGATCTTTGTGAAAACCTTGACTGGAAAAACCATCACCCTGGAGGTGGAG 939530 Query 177975 AGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCG 178034 || |||||||| |||||||| || ||||| |||||||| || |||||||| || Sbjct 939531 CCATCCGACACCATTGAGAACGTGAAGGCCAAGATCCAGGACAAGGAGGGAATCCCCCCA 939590 Query 178035 GACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGAT 178094 |||||||| || || ||||||||||| || || || || ||||| | |||||| | || Sbjct 939591 GACCAGCAGCGTCTCATCTTCGCCGGCAAGCAACTGGAGGATGGCCGCACTCTTTCGGAC 939650 Query 178095 TATAACGTCCAAAAAGAATCAACACTGCAT 178124 || ||| |||| || || || || |||||| Sbjct 939651 TACAACATCCAGAAGGAGTCGACTCTGCAT 939680 >seq1628 Length=3966273 Score = 159 bits (176), Expect = 8e-34 Identities = 165/214 (77%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974 ||||||| |||| ||||||||||||||||| || || || |||||| | ||||| || Sbjct 3671370 AAAATGC---AAATCTTCGTGAAAACTCTCACTGGCAAGACCATCACCTTGGAGGTCGAG 3671314 Query 177975 AGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCG 178034 ||| |||||||||||||| ||||| ||||| |||||||| || || || || || Sbjct 3671313 CCCTCTGACACCATCGAGAATGTCAAGGCTAAGATCCAGGACAAGGAGGGCATTCCCCCA 3671254 Query 178035 GACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGAT 178094 || ||||| || || ||||||||||| || ||||| || ||||| | ||||| |||| Sbjct 3671253 GATCAGCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGCACTCTGTCCGAC 3671194 Query 178095 TATAACGTCCAAAAAGAATCAACACTGCATCTTG 178128 || ||| |||| || || || || ||||| |||| Sbjct 3671193 TACAACATCCAGAAGGAGTCGACCCTGCA-CTTG 3671161 >seq1619 Length=1930428 Score = 150 bits (166), Expect = 4e-31 Identities = 157/205 (77%), Gaps = 1/205 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || |||||||| || || || || || || |||||||||||||| || ||| ||| Sbjct 106731 CAGATCTTCGTGAAGACCCTGACTGGCAAGACCATCACCCTCGAGGTCGAGCCCTCGGAC 106790 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||||||||| ||||| |||||||||||||| || || || || || || ||||| Sbjct 106791 ACCATCGAGAATGTCAAGGCTAAGATTCAGGACAAGGAGGGCATTCCCCCAGATCAGCAG 106850 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | ||||||||||| || ||||| || || ||| | ||| | ||||||| ||| || Sbjct 106851 CGTTTGATCTTCGCCGGCAAGCAGCTGGAGGACGGACGTACTTTGTCCGATTACAACATC 106910 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 || || ||||| || |||| |||| Sbjct 106911 CAGAAGGAATCCACTTTGCA-CTTG 106934 Score = 150 bits (166), Expect = 4e-31 Identities = 157/205 (77%), Gaps = 1/205 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || |||||||| || || || || || || |||||||||||||| || ||| ||| Sbjct 108765 CAGATCTTCGTGAAGACCCTGACTGGCAAGACCATCACCCTCGAGGTCGAGCCCTCGGAC 108824 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||||||||| ||||| |||||||||||||| || || || || || || ||||| Sbjct 108825 ACCATCGAGAATGTCAAGGCTAAGATTCAGGACAAGGAGGGCATTCCCCCAGATCAGCAG 108884 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | ||||||||||| || ||||| || || ||| | ||| | ||||||| ||| || Sbjct 108885 CGTTTGATCTTCGCCGGCAAGCAGCTGGAGGACGGACGTACTTTGTCCGATTACAACATC 108944 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 || || ||||| || |||| |||| Sbjct 108945 CAGAAGGAATCCACTTTGCA-CTTG 108968 Score = 147 bits (162), Expect = 5e-30 Identities = 153/201 (76%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || ||||| || || || || |||||||||||||| || ||| ||| Sbjct 106272 CAGATCTTCGTCAAGACTCTGACTGGCAAGACCATCACCCTCGAGGTCGAGCCCTCGGAC 106331 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||||||||||||||| ||||| |||||||| || || || || || || ||||| Sbjct 106332 ACCATCGAGAACGTCAAGGCTAAGATCCAGGACAAGGAGGGCATTCCCCCAGATCAGCAG 106391 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | ||||||||||| || ||||| || || ||| | ||| | ||||||| ||| || Sbjct 106392 CGTTTGATCTTCGCCGGCAAGCAGCTGGAGGACGGACGTACTTTGTCCGATTACAACATC 106451 Query 178104 CAAAAAGAATCAACACTGCAT 178124 || || || || || ||||| Sbjct 106452 CAGAAGGAGTCCACCTTGCAT 106472 Score = 147 bits (162), Expect = 5e-30 Identities = 153/201 (76%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || || || || || || |||||||||||||| || ||| ||| Sbjct 108309 CAGATCTTCGTCAAGACCCTGACTGGCAAGACCATCACCCTCGAGGTCGAGCCCTCGGAC 108368 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||||||||||||||| ||||| |||||||| || || || || || || ||||| Sbjct 108369 ACCATCGAGAACGTCAAGGCTAAGATCCAGGACAAGGAGGGCATTCCCCCAGATCAGCAG 108428 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | ||||||||||| || ||||| || || ||| | ||| | ||||||| ||| || Sbjct 108429 CGTTTGATCTTCGCCGGCAAGCAGCTGGAGGACGGACGTACTTTGTCCGATTACAACATC 108488 Query 178104 CAAAAAGAATCAACACTGCAT 178124 ||||| || || || ||||| Sbjct 108489 CAAAAGGAGTCCACCTTGCAT 108509 Score = 147 bits (162), Expect = 5e-30 Identities = 153/201 (76%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || ||||| || || || || |||||||||||||| || ||| ||| Sbjct 108537 CAGATCTTCGTCAAGACTCTGACTGGCAAGACCATCACCCTCGAGGTCGAGCCCTCGGAC 108596 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||||||||||||||| ||||| |||||||| || || || || || || ||||| Sbjct 108597 ACCATCGAGAACGTCAAGGCTAAGATCCAGGACAAGGAGGGCATTCCCCCAGATCAGCAG 108656 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | ||||||||||| || ||||| || || ||| | ||| | ||||||| ||| || Sbjct 108657 CGTTTGATCTTCGCCGGCAAGCAGCTGGAGGACGGACGTACTTTATCCGATTACAACATC 108716 Query 178104 CAAAAAGAATCAACACTGCAT 178124 || || || || || ||||| Sbjct 108717 CAGAAGGAGTCCACCTTGCAT 108737 Score = 141 bits (156), Expect = 2e-28 Identities = 154/202 (76%), Gaps = 2/202 (1%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || || || || || || |||||||||||||| || ||| ||| Sbjct 107853 CAGATCTTCGTCAAGACCCTGACTGGCAAGACCATCACCCTCGAGGTCGAGCCCTCGGAC 107912 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||||||||| ||||| ||||| |||||||| || || || || || || ||||| Sbjct 107913 ACCATCGAGAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCAGATCAGCAG 107972 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102 || | ||||||||||| || ||||| || || ||| | || |||| ||||||| ||| | Sbjct 107973 CGTTTGATCTTCGCCGGCAAGCAGCTAGAGGACGGACGTAC-CTTGTCCGATTACAACAT 108031 Query 178103 CCAAAAAGAATCAACACTGCAT 178124 |||||| || || || ||||| Sbjct 108032 CCAAAAGGAGTCCACCTTGCAT 108053 Score = 136 bits (150), Expect = 1e-26 Identities = 154/205 (75%), Gaps = 1/205 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || ||||| || || || || |||||||||||||| || ||| ||| Sbjct 108081 CAGATCTTCGTCAAGACTCTGACTGGCAAGACCATCACCCTCGAGGTCGAGCCCTCGGAC 108140 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||||||||||||||| ||||| |||||||| || || || || || || ||||| Sbjct 108141 ACCATCGAGAACGTCAAGGCTAAGATCCAGGACAAGGAGGGCATTCCCCCAGATCAGCAG 108200 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | ||||||||||| || ||||| || || ||| | || | |||| || ||| || Sbjct 108201 CGTTTGATCTTCGCCGGCAAGCAGCTGGAGGACGGACGTACGTTGTCCGACTACAACATC 108260 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 || || || || || || || |||| Sbjct 108261 CAGAAGGAGTCGACCCTCCA-CTTG 108284 Score = 127 bits (140), Expect = 5e-24 Identities = 153/204 (75%), Gaps = 3/204 (1%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTC-ACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGA 177982 || || ||||| || ||||| || || || || |||||||||||||| || ||| || Sbjct 106500 CAGATCTTCGTCAAGACTCTTGACTGGCAAGACCATCACCCTCGAGGTCGAGCCCTCGGA 106559 Query 177983 CACCATCGAGAA-CGT-CAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAG 178040 |||||||||||| ||| ||| ||||| |||||||| || || || || || || ||| Sbjct 106560 CACCATCGAGAATCGTTCAAGGCTAAGATCCAGGACAAGGAGGGCATTCCCCCAGATCAG 106619 Query 178041 CAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAAC 178100 || || | ||||||||||| || ||||| || || ||| | ||| | ||||||| ||| Sbjct 106620 CAGCGTTTGATCTTCGCCGGCAAGCAGCTGGAGGACGGACGTACTTTATCCGATTACAAC 106679 Query 178101 GTCCAAAAAGAATCAACACTGCAT 178124 |||| || || || || ||||| Sbjct 106680 ATCCAGAAGGAGTCCACCTTGCAT 106703 Score = 125 bits (138), Expect = 2e-23 Identities = 151/203 (74%), Gaps = 2/203 (1%) Strand=Plus/Plus Query 177924 CAAATTTTCG-TGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGA 177982 || || |||| | || ||||| || || || || |||||||||||||| || ||| || Sbjct 106042 CAGATCTTCGCTCAAGACTCTGACTGGCAAGACCATCACCCTCGAGGTCGAGCCCTCGGA 106101 Query 177983 CACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGG-AATCCCTCCGGACCAGC 178041 |||||||||||| ||||| ||||| |||||||| || || | || | || || |||| Sbjct 106102 CACCATCGAGAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCACCCCAGATCAGC 106161 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 | || | ||||||||||| || ||||| || || ||| | || | |||| || ||| Sbjct 106162 AGCGTTTGATCTTCGCCGGCAAGCAGCTGGAGGACGGACGTACGTTGTCCGACTACAACA 106221 Query 178102 TCCAAAAAGAATCAACACTGCAT 178124 ||||||| || || || ||||| Sbjct 106222 TCCAAAAGGAGTCCACCTTGCAT 106244 Score = 122 bits (134), Expect = 2e-22 Identities = 152/205 (74%), Gaps = 4/205 (2%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTG-GAAAGCTCAGA 177982 || || ||||| || ||||| || || || || |||||||||| || || ||| || Sbjct 105342 CAGATCTTCGTCAAGACTCTGACTGGCAAGACCATCACCCTCGTTGTTCGAGCCCTCGGA 105401 Query 177983 CACCATCGAGAACGTCAAACAAAAGATTC--AGGACAAAGAAGGAATCCCTCCGGACCAG 178040 |||||||||||||||||| ||||| | ||||||| || || || || || || ||| Sbjct 105402 CACCATCGAGAACGTCAAGGCTAAGATCCCAAGGACAAGGAGGGCATTCCCCCAGATCAG 105461 Query 178041 CAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTT-GCCGATTATAA 178099 || || | ||||||||||| || ||||| || || ||| | ||| || ||||||| || Sbjct 105462 CAGCGTTTGATCTTCGCCGGCAAGCAGCTGGAGGACGGACGTACTTTTATCCGATTACAA 105521 Query 178100 CGTCCAAAAAGAATCAACACTGCAT 178124 | |||| || || || || ||||| Sbjct 105522 CATCCAGAAGGAGTCCACCTTGCAT 105546 Score = 120 bits (132), Expect = 7e-22 Identities = 152/206 (74%), Gaps = 5/206 (2%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGA-GGTGGAAAGCTCAGA 177982 || || ||||| || || || || || || || ||||||||||| ||| || ||| || Sbjct 105809 CAGATCTTCGTCAAGACCCTGACTGGCAAGACCATCACCCTCGAAGGTCGAGCCCTCGGA 105868 Query 177983 CACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAA--GGAATCCCTCCGGACCAG 178040 |||||||||||| ||||| ||||| |||||||| | | || || || || || ||| Sbjct 105869 CACCATCGAGAATGTCAAGGCCAAGATCCAGGACAAGGGAGCGGCATTCCCCCAGATCAG 105928 Query 178041 CAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG--CCGATTATA 178098 || || | ||||||||||| || ||||| || || ||| | || ||| ||||||| | Sbjct 105929 CAGCGTTTGATCTTCGCCGGCAAGCAGCTAGAGGACGGACGTACGTTTGTCCCGATTACA 105988 Query 178099 ACGTCCAAAAAGAATCAACACTGCAT 178124 || |||| || || || || ||||| Sbjct 105989 ACATCCAGAAGGAGTCCACCTTGCAT 106014 Score = 113 bits (124), Expect = 1e-19 Identities = 140/188 (74%), Gaps = 3/188 (2%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || || || || || || |||||||||||||| || ||| ||| Sbjct 107383 CAGATCTTCGTCAAGACCCTGACTGGCAAGACCATCACCCTCGAGGTCGAGCCCTCGGAC 107442 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGG-AATCCCTCCGGACCAGCA 178042 ||||||||||| ||||| ||||| |||||||| || || || || || || ||||| Sbjct 107443 ACCATCGAGAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCCATTCCCCCAGATCAGCA 107502 Query 178043 -ACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCT-TGCCGATTATAAC 178100 || | ||||||||||| || ||||| || || ||| | ||| | | | ||||| ||| Sbjct 107503 GGCGTTTGATCTTCGCCGGCAAGCAGCTAGAGGACGGACGTACTTTGTCCTGATTACAAC 107562 Query 178101 GTCCAAAA 178108 |||| || Sbjct 107563 ATCCAGAA 107570 Score = 96.9 bits (106), Expect = 8e-15 Identities = 154/212 (73%), Gaps = 8/212 (4%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTC-TCACAGGAAAA-ACGATCACCCTCGAGGTGGAAAGCTCAG 177981 || || |||||||| || | | || || ||| || |||||||||||||| || ||| | Sbjct 105574 CAGATCTTCGTGAAGACCCCTGACTGGCAAAGACCATCACCCTCGAGGTCGAGCCCTCGG 105633 Query 177982 ACACCATCGAGAACGTCAA-ACAAAAGAT-TCAGGAC-AAAGAAGGAATCCCTCCGGACC 178038 ||||||||||||||||||| ||||| |||||| || || || || || || || | Sbjct 105634 ACACCATCGAGAACGTCAAGGGCCAAGATCCCAGGACGAAGGAGGGCATTCCCCCAGATC 105693 Query 178039 AGCAACGACTTATCTTC--GCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTA 178096 |||| || | |||||| |||| || ||||| || || ||| | || | |||| || Sbjct 105694 AGCAGCGTTTGATCTTCTGTCCGGCAAGCAGCTGGAGGACGGACGTACGTTGTCCGACTA 105753 Query 178097 TAACGTCCAAAAAGAATCAACACTGCATCTTG 178128 ||| |||| || || || || || || |||| Sbjct 105754 CAACATCCAGAAGGAGTCGACCCTCCA-CTTG 105784 Score = 93.3 bits (102), Expect = 1e-13 Identities = 149/205 (73%), Gaps = 7/205 (3%) Strand=Plus/Plus Query 177927 ATTTTCGTGAAAACTC-TCACAGGAAAAACGATCACCCT-CGA-GGTGGAAAGCTCAG-A 177982 || |||||||| |||| | || || || || |||||||| ||| ||| || ||| | | Sbjct 107621 ATCTTCGTGAAGACTCCTGACTGGCAAGACCATCACCCTTCGAAGGTCGAGCCCTCGGGA 107680 Query 177983 CACCATCGAGAACGTCAAACAAAAGATTCA-GGACAAAGAA-GGAATCCCTCCGGACCAG 178040 |||||||||||| ||||| ||||| || |||||| || || || || || || ||| Sbjct 107681 CACCATCGAGAATGTCAAGGCCAAGATCCAAGGACAAGGAGCGGCATTCCCCCAGATCAG 107740 Query 178041 CAACGACTTATCTTCGCCGGAAAACAGCTCGAAGA-TGGAAGGACTCTTGCCGATTATAA 178099 || || | ||||||||||| || ||||| || || ||| | || | |||| || || Sbjct 107741 CAGCGTTTGATCTTCGCCGGCAAGCAGCTGGAGGACCGGACGTACGTTGTCCGACTACAA 107800 Query 178100 CGTCCAAAAAGAATCAACACTGCAT 178124 | |||| || || || || ||||| Sbjct 107801 CATCCAGAAGGAGTCCACCTTGCAT 107825 >seq1635 Length=10282868 Score = 120 bits (132), Expect = 7e-22 Identities = 147/201 (73%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || || || || || || || || || || || ||||| ||| || || Sbjct 1470421 CAGATCTTTGTAAAGACCCTAACGGGCAAGACCATAACTCTTGAGGTCGAACCGTCGGAT 1470362 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || |||||| ||||| ||||||||||||||||| ||||| || || || Sbjct 1470361 ACCATCGAAAATGTCAAAGCCAAGATCCAGGACAAAGAAGGAATTCCTCCAGATCAACAG 1470302 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | |||||||| || || || | |||||||| | || || | ||||||||| | Sbjct 1470301 CGTTTGATCTTCGCTGGCAAGCAATTGGAAGATGGCCGAACACTGTCTGATTATAACATT 1470242 Query 178104 CAAAAAGAATCAACACTGCAT 178124 || || || ||||| ||||| Sbjct 1470241 CAGAAGGAGTCAACCTTGCAT 1470221 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203533202016572