Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20pseudoobscura_20pseudoobscura_20[refseq_20GCF_5F0000017
65.3_202013-04-11] 4,790 sequences; 152,696,384 total letters
Query= NC_001650.2
Length=184439
Score E
Sequences producing significant alignments: (Bits) Value
seq15 181 1e-40
>seq15
Length=6594820
Score = 181 bits (200), Expect = 1e-40
Identities = 244/340 (72%), Gaps = 6/340 (2%)
Strand=Plus/Minus
Query 145606 AAGTCATCTATGTCCTCCACCCGCCTCAGGATCCTGAGCCTGGGAAAGGGCCGGGGGCTC 145665
|| || || |||| ||| ||| | | | ||| | ||| | ||||| ||||| || |
Sbjct 4186024 AAATCTTCAATGTTCTCAACCTGTCGCTTGATGTTCAGCTTTGGAAACGGCCGCGGCTTG 4185965
Query 145666 CTGGTCAGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGG 145725
| ||||||| |||||| || || || ||||| || || || || ||||| |||| |
Sbjct 4185964 CGTTTCAGCTGCTCCTTCAGTGGATCAACATGGTTAAGATACACATGAGCGTCGCCCATG 4185905
Query 145726 ACGTGGATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGG 145785
|||||| ||||| || | || | ||| || | ||||| | ||||||||||||||||
Sbjct 4185904 GTGTGGATAAAGTCGCCCGTCTTCAAGCCAGTTACATGGGCTATCATGTAGGTCAGCAGG 4185845
Query 145786 GAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGC 145845
| |||| ||| |||||||| ||||| || || |||||||| | |||||| |||| |
Sbjct 4185844 GCGTAGGAGGCGATGTTGAATGGCACGCCAAGGCCCATGTCGGCGCTGCGCTGATACAAC 4185785
Query 145846 TGGCAGGAGAGCTCCCCGC------CCGCCACGTAGAACTGGCACAGGAGGTGGCAGGGC 145899
|||||||| ||||| |||| || ||||||||||| ||| |||||||||
Sbjct 4185784 TGGCAGGACAGCTCTCCGCGGGTCTGCGAGACGTAGAACTGTGCCAGACAATGGCAGGGC 4185725
Query 145900 GGCAGGGCCATGGCGGGCAGGTCCGCCGGGTTCCAGGCGG 145939
|| || ||||| ||| | |||| ||| ||||| ||||
Sbjct 4185724 GGAAGTGCCATTTTGGGTATGTCCAGCGGATTCCATGCGG 4185685
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 590041469151600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |