Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20pseudoobscura_20pseudoobscura_20[refseq_20GCF_5F0000017
65.3_202013-04-11] 4,790 sequences; 152,696,384 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq3 154 1e-32
seq12 143 2e-29
seq6 129 5e-25
>seq3
Length=12541198
Score = 154 bits (170), Expect = 1e-32
Identities = 171/228 (75%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571
|||||||| | | | ||||||||||| || ||||| || || |||||||| ||| |
Sbjct 3175251 CCTCCGCGCAGGCGGAGCACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAC 3175192
Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631
| ||| || ||||| ||||| || || ||| |||| | |||||||||||| || ||
Sbjct 3175191 AAAGTACGTCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGGGA 3175132
Query 118632 ATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACC 118691
|||||||||||||| || || || || | |||| |||||||| | |||||||
Sbjct 3175131 ATGCCCTCCTTGTCCTGGATCTTAGCCTTGACATTCTCGATGGTGTCCGAGGGCTCGACC 3175072
Query 118692 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739
|||| ||| | || ||||| |||||||| || ||||| |||||||||
Sbjct 3175071 TCGAGGGTGATGGTCTTGCCAGTCAGAGTCTTGACAAAGATCTGCATG 3175024
Score = 152 bits (168), Expect = 4e-32
Identities = 162/214 (76%), Gaps = 0/214 (0%)
Strand=Plus/Minus
Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATC 118585
||| |||||||| | || ||||| || || |||||||||||| || ||| || ||
Sbjct 3175921 CAATACCAAGTGCAAAGTGGACTCCTTCTGGATGTTGTAATCGGACAAAGTACGTCCGTC 3175862
Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645
||| ||||| || || ||| |||| | |||||||||||| || || ||||||||||||||
Sbjct 3175861 CTCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGGGAATGCCCTCCTTGTC 3175802
Query 118646 TGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGT 118705
|| || || || | |||| |||||||| | ||||||||||| ||| | ||
Sbjct 3175801 CTGGATCTTAGCCTTGACATTCTCGATGGTGTCCGAGGGCTCGACCTCGAGGGTGATGGT 3175742
Query 118706 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739
||||| |||||||| || ||||| |||||||||
Sbjct 3175741 CTTGCCAGTCAGAGTCTTGACAAAGATCTGCATG 3175708
Score = 147 bits (162), Expect = 2e-30
Identities = 159/211 (75%), Gaps = 0/211 (0%)
Strand=Plus/Minus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588
|||||| || | || ||||| || || |||||||||||| || ||| || |||||
Sbjct 3174550 CACCAAATGCAAGGTGGACTCCTTCTGGATGTTGTAATCGGACAAAGTACGTCCGTCCTC 3174491
Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648
||||| || || ||| |||| | |||||||||||| || || ||||||||||||||
Sbjct 3174490 CAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGGGAATGCCCTCCTTGTCCTG 3174431
Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708
|| || || || | |||| |||||||| | ||||||||||| ||| | || ||
Sbjct 3174430 GATCTTAGCCTTGACATTCTCGATGGTGTCCGAGGGCTCGACCTCGAGGGTGATGGTCTT 3174371
Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739
||| |||||||| || ||||| |||||||||
Sbjct 3174370 GCCAGTCAGAGTCTTGACAAAGATCTGCATG 3174340
Score = 147 bits (162), Expect = 2e-30
Identities = 159/211 (75%), Gaps = 0/211 (0%)
Strand=Plus/Minus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588
|||||| || | || ||||| || || |||||||||||| || ||| || |||||
Sbjct 3174778 CACCAAATGCAAGGTGGACTCCTTCTGGATGTTGTAATCGGACAAAGTACGTCCGTCCTC 3174719
Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648
||||| || || ||| |||| | |||||||||||| || || ||||||||||||||
Sbjct 3174718 CAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGGGAATGCCCTCCTTGTCCTG 3174659
Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708
|| || || || | |||| |||||||| | ||||||||||| ||| | || ||
Sbjct 3174658 GATCTTAGCCTTGACATTCTCGATGGTGTCCGAGGGCTCGACCTCGAGGGTGATGGTCTT 3174599
Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739
||| |||||||| || ||||| |||||||||
Sbjct 3174598 GCCAGTCAGAGTCTTGACAAAGATCTGCATG 3174568
Score = 143 bits (158), Expect = 2e-29
Identities = 160/214 (75%), Gaps = 0/214 (0%)
Strand=Plus/Minus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588
|||||| || | || ||||| || || |||||||||||| || ||| || |||||
Sbjct 3175462 CACCAAATGCAAGGTGGACTCCTTCTGGATGTTGTAATCGGACAAAGTACGTCCGTCCTC 3175403
Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648
||||| || || ||| |||| | |||||||||||| || || ||||||||||||||
Sbjct 3175402 CAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGGGAATGCCCTCCTTGTCCTG 3175343
Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708
|| || || || | |||| |||||||| | ||||||||||| ||| | || ||
Sbjct 3175342 GATCTTAGCCTTGACATTCTCGATGGTGTCCGAGGGCTCGACCTCGAGGGTGATGGTCTT 3175283
Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 118742
||| |||||||| || || || ||||||||| ||
Sbjct 3175282 GCCAGTCAGAGTCTTCACGAAGATCTGCATGCCT 3175249
Score = 141 bits (156), Expect = 8e-29
Identities = 158/211 (75%), Gaps = 0/211 (0%)
Strand=Plus/Minus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588
|||||| || | || ||||| || || |||||||| ||| || ||| || |||||
Sbjct 3174322 CACCAAATGCAAGGTGGACTCCTTCTGGATGTTGTAGTCGGACAAAGTACGTCCGTCCTC 3174263
Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648
||||| || || ||| |||| | |||||||||||| || || ||||||||||||||
Sbjct 3174262 CAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGGGAATGCCCTCCTTGTCCTG 3174203
Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708
|| || || || | |||| |||||||| | ||||||||||| ||| | || ||
Sbjct 3174202 GATCTTAGCCTTGACATTCTCGATGGTGTCCGAGGGCTCGACCTCGAGGGTGATAGTCTT 3174143
Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739
||| |||||||| || ||||| |||||||||
Sbjct 3174142 GCCAGTCAGAGTCTTGACAAAGATCTGCATG 3174112
Score = 141 bits (156), Expect = 8e-29
Identities = 158/211 (75%), Gaps = 0/211 (0%)
Strand=Plus/Minus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588
|||||| || | || ||||| || || |||||||| ||| || ||| || |||||
Sbjct 3175006 CACCAAATGCAAGGTGGACTCCTTCTGGATGTTGTAGTCGGACAAAGTACGTCCGTCCTC 3174947
Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648
||||| || || ||| |||| | |||||||||||| || || ||||||||||||||
Sbjct 3174946 CAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGGGAATGCCCTCCTTGTCCTG 3174887
Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708
|| || || || | |||| |||||||| | ||||||||||| ||| | || ||
Sbjct 3174886 GATCTTAGCCTTGACATTCTCGATGGTGTCCGAGGGCTCGACCTCGAGGGTGATGGTCTT 3174827
Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739
||| |||||||| || ||||| |||||||||
Sbjct 3174826 GCCAGTCAGAGTCTTGACAAAGATCTGCATG 3174796
Score = 141 bits (156), Expect = 8e-29
Identities = 158/211 (75%), Gaps = 0/211 (0%)
Strand=Plus/Minus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588
|||||| || | || ||||| || || |||||||| ||| || ||| || |||||
Sbjct 3175690 CACCAAATGCAAGGTGGACTCCTTCTGGATGTTGTAGTCGGACAAAGTACGTCCGTCCTC 3175631
Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648
||||| || || ||| |||| | |||||||||||| || || ||||||||||||||
Sbjct 3175630 CAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGGGAATGCCCTCCTTGTCCTG 3175571
Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708
|| || || || | |||| |||||||| | ||||||||||| ||| | || ||
Sbjct 3175570 GATCTTAGCCTTGACATTCTCGATGGTGTCCGAGGGCTCGACCTCGAGGGTGATGGTCTT 3175511
Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739
||| |||||||| || ||||| |||||||||
Sbjct 3175510 GCCAGTCAGAGTCTTGACAAAGATCTGCATG 3175480
Score = 127 bits (140), Expect = 2e-24
Identities = 154/210 (73%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588
|||||| || | || ||||| || || |||||||||||| || || || |||||
Sbjct 3174094 CACCAAATGCAAGGTGGACTCCTTCTGGATGTTGTAATCGGACAAGGTACGTCCGTCCTC 3174035
Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648
||||| || || ||| |||| | |||||||||||| || || ||||||||||||||
Sbjct 3174034 CAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGGGAATGCCCTCCTTGTCCTG 3173975
Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708
|| || || || | |||| |||||||| | ||| ||||||| ||| | || ||
Sbjct 3173974 GATCTTGGCCTTGACATTCTCGATGGTGTCCGAGGGCTCAACCTCGAGGGTGATGGTCTT 3173915
Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
||| ||||| || || || || ||||||||
Sbjct 3173914 GCCAGTCAGGGTCTTCACGAAGATCTGCAT 3173885
>seq12
Length=1235759
Score = 143 bits (158), Expect = 2e-29
Identities = 169/229 (74%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569
|||| ||||| | | | ||||||||| | || ||||| || || |||||||| |||
Sbjct 219396 TACCACCGCGCAGGCGGAGCACCAAGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCGG 219337
Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629
|| |||||| |||||| ||||| || || ||| |||| |||||||||||||| || |
Sbjct 219336 ACAGAGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGGG 219277
Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689
| |||||||||||||| || || || || | |||| |||||| | | |||||
Sbjct 219276 GAATGCCCTCCTTGTCCTGGATCTTAGCCTTGACATTCTCGATGGTGTCAGAGGGCTCGA 219217
Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|||| | ||| | || ||||| || |||||||| || || || |||||
Sbjct 219216 CCTCCAAGGTGATGGTCTTGCCAGTGAGAGTTTTCACGAAGATTTGCAT 219168
>seq6
Length=9197557
Score = 129 bits (142), Expect = 5e-25
Identities = 166/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569
|||| ||||| | | || |||||| |||| || ||||| || || |||||||| ||
Sbjct 543905 TACCACCGCGGAGACGCAGCACCAAATGGAGAGTCGACTCCTTCTGGATGTTGTAGTCAG 543964
Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629
| |||||| |||||| ||||| || || ||| |||||||||||||||| || ||||
Sbjct 543965 AAAGAGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCTGGAG 544024
Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689
| || ||||||||||| || || || || | || | |||||| | ||| |
Sbjct 544025 GGATTCCCTCCTTGTCCTGGATCTTGGCCTTTACGTTCTCAATGGTGTCGGATGGCTCCA 544084
Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|||| | ||| | ||||| ||||||| ||||| ||||| || |||||
Sbjct 544085 CCTCCAGGGTGATGGTTTTTCCGGTCAAGGTTTTCACAAAGATTTGCAT 544133
Score = 127 bits (140), Expect = 2e-24
Identities = 156/213 (73%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATC 118585
|| |||||| |||| || ||||| || || |||||||| || | |||||| |||
Sbjct 542325 CAGCACCAAATGGAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTGCGGCCATC 542384
Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645
|| ||||| || |||||| |||||||||||||||| || || || || |||||||||||
Sbjct 542385 TTCCAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCTGGGGGGATTCCCTCCTTGTC 542444
Query 118646 TGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGT 118705
||| || ||| || | || | |||||| | |||||||| | ||| | ||
Sbjct 542445 CTGAATCTTGGCTTTCACGTTCTCAATGGTGTCAGAAGGTTCGACCTCCAGGGTAATAGT 542504
Query 118706 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
||| || |||||||| || || ||||| |||||
Sbjct 542505 TTTTCCAGTCAGAGTCTTCACGAAAATTTGCAT 542537
Score = 125 bits (138), Expect = 6e-24
Identities = 165/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569
|||| ||||| | | || |||||| |||| || ||||| || || |||||||| ||
Sbjct 542537 TACCACCGCGGAGACGCAGCACCAAATGGAGAGTCGACTCCTTCTGGATGTTGTAGTCCG 542596
Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629
| |||||| |||||| ||||| || || ||| |||||||||||||||| || || |
Sbjct 542597 AAAGAGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCAGGGG 542656
Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689
| || ||||||||||| || || || || | || | |||||| | ||| |
Sbjct 542657 GGATTCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGGATGGCTCCA 542716
Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|||| | ||| | ||||| ||||||| ||||| ||||| || |||||
Sbjct 542717 CCTCCAGGGTGATGGTTTTTCCGGTCAAGGTTTTCACAAAGATTTGCAT 542765
Score = 125 bits (138), Expect = 6e-24
Identities = 165/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569
|||| ||||| | | || |||||| |||| || ||||| || || |||||||| ||
Sbjct 543449 TACCACCGCGGAGACGCAGCACCAAATGGAGAGTCGACTCCTTCTGGATGTTGTAGTCCG 543508
Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629
| |||||| |||||| ||||| || || ||| |||||||||||||||| || || |
Sbjct 543509 AAAGAGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCAGGGG 543568
Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689
| || ||||||||||| || || || || | || | |||||| | ||| |
Sbjct 543569 GGATTCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGGATGGCTCCA 543628
Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|||| | ||| | ||||| || |||||||| || || || ||||||||
Sbjct 543629 CCTCCAGGGTGATGGTTTTTCCAGTCAGAGTCTTCACGAAGATCTGCAT 543677
Score = 125 bits (138), Expect = 6e-24
Identities = 165/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569
|||| ||||| | | || |||||| |||| || ||||| || || |||||||| ||
Sbjct 543677 TACCACCGCGGAGACGCAGCACCAAATGGAGAGTCGACTCCTTCTGGATGTTGTAGTCCG 543736
Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629
| |||||| |||||| ||||| || || ||| |||||||||||||||| || || |
Sbjct 543737 AAAGAGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCAGGGG 543796
Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689
| || ||||||||||| || || || || | || | |||||| | ||| |
Sbjct 543797 GGATTCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGGATGGCTCCA 543856
Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|||| | ||| | ||||| ||||||| ||||| ||||| || |||||
Sbjct 543857 CCTCCAGGGTGATGGTTTTTCCGGTCAAGGTTTTCACAAAGATTTGCAT 543905
Score = 120 bits (132), Expect = 3e-22
Identities = 164/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569
|||| ||||| | | | |||||| || | || ||||| || || |||||||| ||
Sbjct 542765 TACCACCGCGGAGACGAAGCACCAAATGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCG 542824
Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629
| |||||| |||||| ||||| || || ||| |||||||||||||||| || || |
Sbjct 542825 AAAGAGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCTGGGG 542884
Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689
| || ||||||||||| || || || || | || | |||||| | ||| |
Sbjct 542885 GGATTCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGGATGGCTCCA 542944
Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|||| | ||| | ||||| ||||||| ||||| |||||||| |||||
Sbjct 542945 CCTCCAGGGTGATGGTTTTTCCGGTCAAGGTTTTCACAAAAATTTGCAT 542993
Score = 120 bits (132), Expect = 3e-22
Identities = 164/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569
|||| ||||| | | | |||||| || | || ||||| || || |||||||| ||
Sbjct 542993 TACCACCGCGGAGACGAAGCACCAAATGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCG 543052
Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629
| |||||| |||||| ||||| ||||| ||| |||||||||||||||| || || |
Sbjct 543053 AAAGAGTGCGGCCATCCTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCTGGGG 543112
Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689
| || ||||||||||| || || || || | || | |||||| | ||| |
Sbjct 543113 GGATTCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGGATGGCTCCA 543172
Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|||| | ||| | ||||| ||||||| ||||| ||||| || |||||
Sbjct 543173 CCTCCAGGGTGATGGTTTTTCCGGTCAAGGTTTTCACAAAGATTTGCAT 543221
Score = 120 bits (132), Expect = 3e-22
Identities = 164/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569
|||| ||||| | | | |||||| || | || ||||| || || |||||||| ||
Sbjct 543221 TACCACCGCGGAGACGAAGCACCAAATGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCG 543280
Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629
| |||||| |||||| ||||| || || ||| |||||||||||||||| || || |
Sbjct 543281 AAAGAGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCAGGGG 543340
Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689
| || ||||||||||| || || || || | || | |||||| | ||| |
Sbjct 543341 GGATTCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGGATGGCTCCA 543400
Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|||| | ||| | ||||| ||||||| ||||| |||||||| |||||
Sbjct 543401 CCTCCAGGGTGATGGTTTTTCCGGTCAAGGTTTTCACAAAAATTTGCAT 543449
Score = 120 bits (132), Expect = 3e-22
Identities = 164/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569
|||| ||||| | | || |||||| |||| || ||||| || || |||||||| ||
Sbjct 544133 TACCACCGCGGAGACGCAGCACCAAATGGAGAGTCGACTCCTTCTGGATGTTGTAGTCCG 544192
Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629
| |||||| |||||| || || || || ||| |||||||||||||||| || || |
Sbjct 544193 AAAGAGTGCGGCCATCCTCCAGTTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCTGGGG 544252
Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689
| || ||||||||||| || || || || | || | |||||| | ||| |
Sbjct 544253 GGATTCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGGATGGCTCCA 544312
Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
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Sbjct 544313 CCTCCAGGGTGATGGTTTTTCCAGTCAAGGTTTTCACAAAGATCTGCAT 544361
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433805073794680
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