Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20pseudoobscura_20pseudoobscura_20[refseq_20GCF_5F0000017
65.3_202013-04-11] 4,790 sequences; 152,696,384 total letters
Query= NC_004117.1
Length=158482
Score E
Sequences producing significant alignments: (Bits) Value
seq4631 100 3e-16
>seq4631
Length=7852
Score = 100 bits (110), Expect = 3e-16
Identities = 151/215 (70%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 142976 ACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCG 143035
|||||||| | ||||| || || || ||||| ||||| || ||| | |||||
Sbjct 697 ACTAAATGCAAGGTAGACTCCTTCTGAATGTTATAATCAGACAGTGTTCGGCCATCTTCC 638
Query 143036 AGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTA 143095
| ||| || ||||| |||||| ||| || ||||| ||||| || |||||||||||
Sbjct 637 AATTGCTTGCCAGCGAAGATCAAACGCTGTTGATCTGGAGGAATTCCTTCTTTGTCCTGG 578
Query 143096 ATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTG 143155
|| || ||| | | ||| | || |||| ||||| || |||| ||| | ||||||
Sbjct 577 ATCTTGGCTTTGACATTTTCGATGGTATCCGACGGTTCGACCTCAAGAGTTATGGTCTTG 518
Query 143156 CCGGTCAATGTTTTTACGAATATTTGCATAGCTTA 143190
|| || | || ||||| || || ||||| | |||
Sbjct 517 CCCGTTAGGGTCTTTACAAAGATCTGCATGGTTTA 483
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 506984042512800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |