Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20pseudoobscura_20pseudoobscura_20[refseq_20GCF_5F0000017
65.3_202013-04-11] 4,790 sequences; 152,696,384 total letters
Query= NC_005337.1
Length=134431
Score E
Sequences producing significant alignments: (Bits) Value
seq14 140 3e-28
>seq14
Length=11685562
Score = 140 bits (154), Expect = 3e-28
Identities = 155/207 (75%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 5581 GCGCTCGCAGATCAGCTGCGCTATTCGGTCGCCCGTCTTTACCTCGAAATCGTTGTGGCC 5640
||||||||| || | ||| || || || || || ||| |||||||| || | |
Sbjct 6320690 GCGCTCGCAAATGAACTGAGCAATGCGATCTCCAACCTTCACCTCGAAGTCCGTATCAGA 6320631
Query 5641 GAAGTTGAACAGCACCACGCCCACGTTGCCGCGGTAGTCGGCGTCTATCACGCCCGCGCC 5700
| |||||| || || || |||| ||||||||||||||| |||| | |||||| |||||
Sbjct 6320630 GTGGTTGAAGAGAACGACACCCAGGTTGCCGCGGTAGTCTTCGTCCACCACGCCGGCGCC 6320571
Query 5701 CACGTCGATGAAGTGCTTGACCGCCAGGCCGGAGCGGGGAGCCACGCGGCCGTAGCACCC 5760
||| || ||||| | ||| || |||||||| ||||| ||||| ||||| || ||| | ||
Sbjct 6320570 CACATCAATGAAATTCTTCACGGCCAGGCCAGAGCGAGGAGCGACGCGACCATAGGAGCC 6320511
Query 5761 ATCGGGAAGCTGTATCTGCAGGTCCGT 5787
|| |||| || | ||||||||| ||
Sbjct 6320510 CTCCGGAACTTGAACCTGCAGGTCGGT 6320484
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 430029294230480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |