Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20pseudoobscura_20pseudoobscura_20[refseq_20GCF_5F0000017 65.3_202013-04-11] 4,790 sequences; 152,696,384 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq3 150 2e-31 seq12 140 3e-28 seq6 109 5e-19 seq4631 107 2e-18 >seq3 Length=12541198 Score = 150 bits (166), Expect = 2e-31 Identities = 166/219 (76%), Gaps = 4/219 (2%) Strand=Plus/Minus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGT--GTTGG 94850 ||||| |||||||||||||| || ||||| || | ||| |||||| || ||| || | Sbjct 3175923 CGCAATACCAAGTGCAAAGTGGACTCCTTCTGGATGTTGTAATCGGACAAAGTACGTCCG 3175864 Query 94851 AATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTT 94910 ||||||||||| || ||| | ||||| || | ||||||||||| ||||| || || | Sbjct 3175863 --TCCTCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGGGAATGCCCTCCT 3175806 Query 94911 TGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGA 94970 |||| | || || |||||||| ||| ||||| | | | ||||| || | |||| Sbjct 3175805 TGTCCTGGATCTTAGCCTTGACATTCTCGATGGTGTCCGAGGGCTCGACCTCGAGGGTGA 3175746 Query 94971 TGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 |||| || ||||| ||||| || |||||||||||||||| Sbjct 3175745 TGGTCTTGCCAGTCAGAGTCTTGACAAAGATCTGCATGC 3175707 Score = 138 bits (152), Expect = 1e-27 Identities = 160/214 (75%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGT--GTTGGAATCC 94855 |||||| ||||| || || ||||| || | ||| |||||| || ||| || | ||| Sbjct 3174550 CACCAAATGCAAGGTGGACTCCTTCTGGATGTTGTAATCGGACAAAGTACGTCCG--TCC 3174493 Query 94856 TCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCA 94915 |||||||| || ||| | ||||| || | ||||||||||| ||||| || || ||||| Sbjct 3174492 TCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGGGAATGCCCTCCTTGTCC 3174433 Query 94916 TAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTT 94975 | || || |||||||| ||| ||||| | | | ||||| || | |||||||| Sbjct 3174432 TGGATCTTAGCCTTGACATTCTCGATGGTGTCCGAGGGCTCGACCTCGAGGGTGATGGTC 3174373 Query 94976 TTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 || ||||| ||||| || |||||||||||||||| Sbjct 3174372 TTGCCAGTCAGAGTCTTGACAAAGATCTGCATGC 3174339 Score = 138 bits (152), Expect = 1e-27 Identities = 160/214 (75%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGT--GTTGGAATCC 94855 |||||| ||||| || || ||||| || | ||| |||||| || ||| || | ||| Sbjct 3174778 CACCAAATGCAAGGTGGACTCCTTCTGGATGTTGTAATCGGACAAAGTACGTCCG--TCC 3174721 Query 94856 TCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCA 94915 |||||||| || ||| | ||||| || | ||||||||||| ||||| || || ||||| Sbjct 3174720 TCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGGGAATGCCCTCCTTGTCC 3174661 Query 94916 TAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTT 94975 | || || |||||||| ||| ||||| | | | ||||| || | |||||||| Sbjct 3174660 TGGATCTTAGCCTTGACATTCTCGATGGTGTCCGAGGGCTCGACCTCGAGGGTGATGGTC 3174601 Query 94976 TTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 || ||||| ||||| || |||||||||||||||| Sbjct 3174600 TTGCCAGTCAGAGTCTTGACAAAGATCTGCATGC 3174567 Score = 138 bits (152), Expect = 1e-27 Identities = 160/214 (75%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGT--GTTGGAATCC 94855 |||||| ||||| || || ||||| || | ||| |||||| || ||| || | ||| Sbjct 3175462 CACCAAATGCAAGGTGGACTCCTTCTGGATGTTGTAATCGGACAAAGTACGTCCG--TCC 3175405 Query 94856 TCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCA 94915 |||||||| || ||| | ||||| || | ||||||||||| ||||| || || ||||| Sbjct 3175404 TCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGGGAATGCCCTCCTTGTCC 3175345 Query 94916 TAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTT 94975 | || || |||||||| ||| ||||| | | | ||||| || | |||||||| Sbjct 3175344 TGGATCTTAGCCTTGACATTCTCGATGGTGTCCGAGGGCTCGACCTCGAGGGTGATGGTC 3175285 Query 94976 TTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 || ||||| ||||| ||||| ||||||||||||| Sbjct 3175284 TTGCCAGTCAGAGTCTTCACGAAGATCTGCATGC 3175251 Score = 132 bits (146), Expect = 4e-26 Identities = 159/214 (74%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGT--GTTGGAATCC 94855 |||||| ||||| || || ||||| || | ||| || ||| || ||| || | ||| Sbjct 3175006 CACCAAATGCAAGGTGGACTCCTTCTGGATGTTGTAGTCGGACAAAGTACGTCCG--TCC 3174949 Query 94856 TCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCA 94915 |||||||| || ||| | ||||| || | ||||||||||| ||||| || || ||||| Sbjct 3174948 TCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGGGAATGCCCTCCTTGTCC 3174889 Query 94916 TAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTT 94975 | || || |||||||| ||| ||||| | | | ||||| || | |||||||| Sbjct 3174888 TGGATCTTAGCCTTGACATTCTCGATGGTGTCCGAGGGCTCGACCTCGAGGGTGATGGTC 3174829 Query 94976 TTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 || ||||| ||||| || |||||||||||||||| Sbjct 3174828 TTGCCAGTCAGAGTCTTGACAAAGATCTGCATGC 3174795 Score = 132 bits (146), Expect = 4e-26 Identities = 169/231 (73%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 ||||| | || || | ||||||||| | || || ||||| || | ||| || ||| | Sbjct 3175251 CCTCCGCGCAGGCGGAGCACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAC 3175192 Query 94841 ATAGT--GTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAG 94898 | ||| || | ||||||||||| || ||| | ||||| || | ||||||||||| | Sbjct 3175191 AAAGTACGTCCG--TCCTCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGG 3175134 Query 94899 GAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGA 94958 |||| || || ||||| | || || |||||||| ||| ||||| | | | |||| Sbjct 3175133 GAATGCCCTCCTTGTCCTGGATCTTAGCCTTGACATTCTCGATGGTGTCCGAGGGCTCGA 3175074 Query 94959 CGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 | || | |||||||| || ||||| ||||| || |||||||||||||||| Sbjct 3175073 CCTCGAGGGTGATGGTCTTGCCAGTCAGAGTCTTGACAAAGATCTGCATGC 3175023 Score = 132 bits (146), Expect = 4e-26 Identities = 159/214 (74%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGT--GTTGGAATCC 94855 |||||| ||||| || || ||||| || | ||| || ||| || ||| || | ||| Sbjct 3175690 CACCAAATGCAAGGTGGACTCCTTCTGGATGTTGTAGTCGGACAAAGTACGTCCG--TCC 3175633 Query 94856 TCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCA 94915 |||||||| || ||| | ||||| || | ||||||||||| ||||| || || ||||| Sbjct 3175632 TCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGGGAATGCCCTCCTTGTCC 3175573 Query 94916 TAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTT 94975 | || || |||||||| ||| ||||| | | | ||||| || | |||||||| Sbjct 3175572 TGGATCTTAGCCTTGACATTCTCGATGGTGTCCGAGGGCTCGACCTCGAGGGTGATGGTC 3175513 Query 94976 TTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 || ||||| ||||| || |||||||||||||||| Sbjct 3175512 TTGCCAGTCAGAGTCTTGACAAAGATCTGCATGC 3175479 Score = 129 bits (142), Expect = 5e-25 Identities = 158/214 (74%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGT--GTTGGAATCC 94855 |||||| ||||| || || ||||| || | ||| || ||| || ||| || | ||| Sbjct 3174322 CACCAAATGCAAGGTGGACTCCTTCTGGATGTTGTAGTCGGACAAAGTACGTCCG--TCC 3174265 Query 94856 TCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCA 94915 |||||||| || ||| | ||||| || | ||||||||||| ||||| || || ||||| Sbjct 3174264 TCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGGGAATGCCCTCCTTGTCC 3174205 Query 94916 TAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTT 94975 | || || |||||||| ||| ||||| | | | ||||| || | ||||| || Sbjct 3174204 TGGATCTTAGCCTTGACATTCTCGATGGTGTCCGAGGGCTCGACCTCGAGGGTGATAGTC 3174145 Query 94976 TTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 || ||||| ||||| || |||||||||||||||| Sbjct 3174144 TTGCCAGTCAGAGTCTTGACAAAGATCTGCATGC 3174111 Score = 120 bits (132), Expect = 3e-22 Identities = 155/212 (73%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGT--GTTGGAATCC 94855 |||||| ||||| || || ||||| || | ||| |||||| || || || | ||| Sbjct 3174094 CACCAAATGCAAGGTGGACTCCTTCTGGATGTTGTAATCGGACAAGGTACGTCCG--TCC 3174037 Query 94856 TCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCA 94915 |||||||| || ||| | ||||| || | ||||||||||| ||||| || || ||||| Sbjct 3174036 TCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGGGAATGCCCTCCTTGTCC 3173977 Query 94916 TAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTT 94975 | || || |||||||| ||| ||||| | | | || || || | |||||||| Sbjct 3173976 TGGATCTTGGCCTTGACATTCTCGATGGTGTCCGAGGGCTCAACCTCGAGGGTGATGGTC 3173917 Query 94976 TTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || ||||| || || ||||| ||||||||||| Sbjct 3173916 TTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 3173885 >seq12 Length=1235759 Score = 140 bits (154), Expect = 3e-28 Identities = 157/210 (75%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857 ||||||||||| || || ||||| || | ||| || ||| || |||| | |||||| Sbjct 219377 CACCAAGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGGCCATCCTC 219318 Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917 |||||| || ||| | ||||| | | ||||||||||| ||||| || || ||||| | Sbjct 219317 CAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGGGGAATGCCCTCCTTGTCCTG 219258 Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977 || || |||||||| ||| ||||||| | | ||||| || | |||||||| || Sbjct 219257 GATCTTAGCCTTGACATTCTCGATGGTGTCAGAGGGCTCGACCTCCAAGGTGATGGTCTT 219198 Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||||| ||||||||||| ||||| ||||| Sbjct 219197 GCCAGTGAGAGTTTTCACGAAGATTTGCAT 219168 >seq6 Length=9197557 Score = 109 bits (120), Expect = 5e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857 |||||| |||| ||| || ||||| || | ||| || || | |||| | |||||| Sbjct 543012 CACCAAATGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTGCGGCCATCCTC 543071 Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917 |||||| |||||| | ||||| | | ||||| ||||| || || || || ||||| | Sbjct 543072 CAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCTGGGGGGATTCCCTCCTTGTCCTG 543131 Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977 || || ||||| ||| | | ||||| | | || || || | ||||||||||| Sbjct 543132 GATCTTGGCCTTCACGTTCTCAATGGTGTCGGATGGCTCCACCTCCAGGGTGATGGTTTT 543191 Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||| || | |||||||||||||| ||||| Sbjct 543192 TCCGGTCAAGGTTTTCACAAAGATTTGCAT 543221 Score = 109 bits (120), Expect = 5e-19 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852 |||| |||||| || | ||| || ||||| || | ||| || || | |||| | | Sbjct 543463 CGCAGCACCAAATGGAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTGCGGCCA 543522 Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 ||||||||||| || ||| | ||||| | | ||||| || || || || || || ||| Sbjct 543523 TCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCAGGGGGGATTCCCTCCTTG 543582 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | || || ||||| ||| | | ||||| | | || || || | |||||| Sbjct 543583 TCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGGATGGCTCCACCTCCAGGGTGATG 543642 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||||||||||| ||||| ||||| ||||||||||| Sbjct 543643 GTTTTTCCAGTCAGAGTCTTCACGAAGATCTGCAT 543677 Score = 109 bits (120), Expect = 5e-19 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852 |||| |||||| || | ||| || ||||| || | ||| || || | |||| | | Sbjct 543919 CGCAGCACCAAATGGAGAGTCGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCA 543978 Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 ||||||||||| || ||| | ||||| | | ||||| |||||||| || || || ||| Sbjct 543979 TCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCTGGAGGGATTCCCTCCTTG 544038 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | || || ||||| ||| | | ||||| | | || || || | |||||| Sbjct 544039 TCCTGGATCTTGGCCTTTACGTTCTCAATGGTGTCGGATGGCTCCACCTCCAGGGTGATG 544098 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 |||||||| || | |||||||||||||| ||||| Sbjct 544099 GTTTTTCCGGTCAAGGTTTTCACAAAGATTTGCAT 544133 Score = 109 bits (120), Expect = 5e-19 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852 |||| |||||| || | ||| || ||||| || | ||| || || | |||| | | Sbjct 544147 CGCAGCACCAAATGGAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTGCGGCCA 544206 Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 |||||||| || || ||| | ||||| | | ||||| ||||| || || || || ||| Sbjct 544207 TCCTCCAGTTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCTGGGGGGATTCCCTCCTTG 544266 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | || || ||||| ||| | | ||||| | | || || || | |||||| Sbjct 544267 TCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGGATGGCTCCACCTCCAGGGTGATG 544326 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||||||||||| | |||||||||||||||||||| Sbjct 544327 GTTTTTCCAGTCAAGGTTTTCACAAAGATCTGCAT 544361 Score = 100 bits (110), Expect = 3e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852 |||| |||||| || | ||| || ||||| || | ||| || || | |||| | | Sbjct 542551 CGCAGCACCAAATGGAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTGCGGCCA 542610 Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 ||||||||||| || ||| | ||||| | | ||||| || || || || || || ||| Sbjct 542611 TCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCAGGGGGGATTCCCTCCTTG 542670 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | || || ||||| ||| | | ||||| | | || || || | |||||| Sbjct 542671 TCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGGATGGCTCCACCTCCAGGGTGATG 542730 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 |||||||| || | |||||||||||||| ||||| Sbjct 542731 GTTTTTCCGGTCAAGGTTTTCACAAAGATTTGCAT 542765 Score = 100 bits (110), Expect = 3e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857 |||||| |||| ||| || ||||| || | ||| || || | |||| | |||||| Sbjct 542784 CACCAAATGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTGCGGCCATCCTC 542843 Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917 |||||| || ||| | ||||| | | ||||| ||||| || || || || ||||| | Sbjct 542844 CAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCTGGGGGGATTCCCTCCTTGTCCTG 542903 Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977 || || ||||| ||| | | ||||| | | || || || | ||||||||||| Sbjct 542904 GATCTTGGCCTTCACGTTCTCAATGGTGTCGGATGGCTCCACCTCCAGGGTGATGGTTTT 542963 Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||| || | ||||||||||| || ||||| Sbjct 542964 TCCGGTCAAGGTTTTCACAAAAATTTGCAT 542993 Score = 100 bits (110), Expect = 3e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852 |||| |||||| || | ||| || ||||| || | ||| || || | |||| | | Sbjct 543691 CGCAGCACCAAATGGAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTGCGGCCA 543750 Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 ||||||||||| || ||| | ||||| | | ||||| || || || || || || ||| Sbjct 543751 TCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCAGGGGGGATTCCCTCCTTG 543810 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | || || ||||| ||| | | ||||| | | || || || | |||||| Sbjct 543811 TCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGGATGGCTCCACCTCCAGGGTGATG 543870 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 |||||||| || | |||||||||||||| ||||| Sbjct 543871 GTTTTTCCGGTCAAGGTTTTCACAAAGATTTGCAT 543905 Score = 95.1 bits (104), Expect = 1e-14 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852 |||| |||||| || | ||| || ||||| || | ||| || || | |||| | | Sbjct 542323 CGCAGCACCAAATGGAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTGCGGCCA 542382 Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 || |||||||| || || | ||||| | | ||||| ||||| || || || || ||| Sbjct 542383 TCTTCCAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCTGGGGGGATTCCCTCCTTG 542442 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | ||| || || || ||| | | ||||||| | ||||| || | || || Sbjct 542443 TCCTGAATCTTGGCTTTCACGTTCTCAATGGTGTCAGAAGGTTCGACCTCCAGGGTAATA 542502 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||||||||||| ||||| ||||| || || ||||| Sbjct 542503 GTTTTTCCAGTCAGAGTCTTCACGAAAATTTGCAT 542537 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857 |||||| |||| ||| || ||||| || | ||| || || | |||| | |||||| Sbjct 543240 CACCAAATGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTGCGGCCATCCTC 543299 Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917 |||||| || ||| | ||||| | | ||||| || || || || || || ||||| | Sbjct 543300 CAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCAGGGGGGATTCCCTCCTTGTCCTG 543359 Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977 || || ||||| ||| | | ||||| | | || || || | ||||||||||| Sbjct 543360 GATCTTGGCCTTCACGTTCTCAATGGTGTCGGATGGCTCCACCTCCAGGGTGATGGTTTT 543419 Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||| || | ||||||||||| || ||||| Sbjct 543420 TCCGGTCAAGGTTTTCACAAAAATTTGCAT 543449 >seq4631 Length=7852 Score = 107 bits (118), Expect = 2e-18 Identities = 154/215 (72%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA--ATCCT 94856 || || ||||| ||||| ||||| || | ||||||||| || ||||| | ||| | Sbjct 697 ACTAAATGCAAGGTAGACTCCTTCTGAATGTTATAATCAGACA--GTGTTCGGCCATCTT 640 Query 94857 CCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCAT 94916 ||| || || || | ||||| || | || |||||||||||||| ||||||||||| | Sbjct 639 CCAATTGCTTGCCAGCGAAGATCAAACGCTGTTGATCTGGAGGAATTCCTTCTTTGTCCT 580 Query 94917 AAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTT 94976 || || || ||||| ||| || || | | ||||| |||| || ||||| | Sbjct 579 GGATCTTGGCTTTGACATTTTCGATGGTATCCGACGGTTCGACCTCAAGAGTTATGGTCT 520 Query 94977 TTCCAGTAAGAGTTTTCACAAAGATCTGCATGCTT 95011 | || || || || || ||||||||||||||| || Sbjct 519 TGCCCGTTAGGGTCTTTACAAAGATCTGCATGGTT 485 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448264358564400