Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20pseudoobscura_20pseudoobscura_20[refseq_20GCF_5F0000017
65.3_202013-04-11] 4,790 sequences; 152,696,384 total letters
Query= NC_007151.1
Length=149622
Score E
Sequences producing significant alignments: (Bits) Value
seq10 150 2e-31
seq7 84.2 2e-11
>seq10
Length=19787792
Score = 150 bits (166), Expect = 2e-31
Identities = 211/296 (71%), Gaps = 0/296 (0%)
Strand=Plus/Minus
Query 71678 GATGAACTATGGAATGCTGCTCAGCGACAGCTACGCAATGAGGGTAAAATTCACGGATAC 71737
||||| || ||||| |||| |||| ||||| ||||| || || |||||||
Sbjct 8707807 GATGACCTGTGGAACTCTGCCCAGCTGCAGCTGGTGCGGGAGGGCAAGATGCACGGATTT 8707748
Query 71738 CTACGCATGTACTGGGCCAAAAAGATTCTCGAGTGGACTCAAACTCCCGAGCAGGCGCTC 71797
|| ||||||||||||||||| || || ||||||||||| || || |||||||||||
Sbjct 8707747 CTGCGCATGTACTGGGCCAAGAAAATACTCGAGTGGACGGCCACGCCGGAGCAGGCGCTG 8707688
Query 71798 GAGTATTCTATTTATCTAAACGATAGATACAGTCTCGACGGTCGCGATCCTAACGGTTAT 71857
||||| | || || ||||| | ||||| || ||||| |||||||| || || |||
Sbjct 8707687 GAGTACGCGATCCTGCTGAACGACAAGTACAGCCTAGACGGGCGCGATCCCAATGGCTAT 8707628
Query 71858 GTCGGTTGCATGTGGAGCATTTGCGGTCTTCACGATAGAAGCTTTTTAGAACGTCAAGTG 71917
|| || ||||||||| ||| | || | ||||||| ||| || ||| |
Sbjct 8707627 GTGGGCTGCATGTGGTCTATTGGGGGCATACACGATATGGGCTGGAAGGAGCGTGCGATA 8707568
Query 71918 TTTGGTAAAATTCGCTATATGAATCGTAATGGTTGCGAACGCAAGTTCAATGTGAA 71973
|| || || |||||||| ||||| | | || ||| | ||||||||| | |||||
Sbjct 8707567 TTCGGAAAGATTCGCTACATGAACTATCAAGGATGCAAGCGCAAGTTCGACGTGAA 8707512
>seq7
Length=13333775
Score = 84.2 bits (92), Expect = 2e-11
Identities = 118/166 (71%), Gaps = 0/166 (0%)
Strand=Plus/Plus
Query 115135 TTTTTACAAGAGAGTCCCGAGCATCTACTAAAGATCACGGGCTACATTTTGAACCTACCC 115194
||||||||| ||| |||| || | || |||| ||| | | || ||| ||
Sbjct 10666136 TTTTTACAACAGACCAGCGAGGCTCCCGTGAAAGTCACCGGCGAGGTGCTGGGCCTTGCC 10666195
Query 115195 AAAGGCTTGCACGGATTTCATGTTCACGAATTCGGCGACACGAGCAACGGCTGCACGTCT 115254
|| || |||||||||| ||||| ||||| ||||| |||| | ||||||||||| |||
Sbjct 10666196 AAGGGACTGCACGGATTCCATGTGCACGAGTTCGGGGACAACACCAACGGCTGCATGTCG 10666255
Query 115255 GCAGGCGAGCATTTTAACCCTACGAACATGGCTCACGGTGCGCCCA 115300
| ||| || |||||||| ||||| || |||||||| ||||
Sbjct 10666256 TCCGGCCCCCACTTTAACCCCCGGAACAAGGAGCACGGTGCCCCCA 10666301
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478633740088800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |