Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20pseudoobscura_20pseudoobscura_20[refseq_20GCF_5F0000017 65.3_202013-04-11] 4,790 sequences; 152,696,384 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq3 158 1e-33 seq6 143 3e-29 seq12 140 3e-28 seq10 132 5e-26 seq4631 114 1e-20 seq7 109 5e-19 >seq3 Length=12541198 Score = 158 bits (174), Expect = 1e-33 Identities = 174/232 (75%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||||||||||| || ||||| ||||| | ||| |||||||| || |||||||||||| Sbjct 3175480 GCCACCGCGCAGGCGGAGCACCAAATGCAAGGTGGACTCCTTCTGGATGTTGTAATCGGA 3175421 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || || || |||||| ||||||||||| ||| |||| ||||||||||| || || || Sbjct 3175420 CAAAGTACGTCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGGG 3175361 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || || || ||||| ||| || ||||| | ||| | || || | || ||||| Sbjct 3175360 AATGCCCTCCTTGTCCTGGATCTTAGCCTTGACATTCTCGATGGTGTCCGAGGGCTCGAC 3175301 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGACT 131238 |||| ||| | ||| || || || ||||| || ||||| ||||||||| || Sbjct 3175300 CTCGAGGGTGATGGTCTTGCCAGTCAGAGTCTTCACGAAGATCTGCATGCCT 3175249 Score = 152 bits (168), Expect = 5e-32 Identities = 171/229 (75%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||||||||||| || ||||| ||||| | ||| |||||||| || |||||||||||| Sbjct 3174568 GCCACCGCGCAGGCGGAGCACCAAATGCAAGGTGGACTCCTTCTGGATGTTGTAATCGGA 3174509 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || || || |||||| ||||||||||| ||| |||| ||||||||||| || || || Sbjct 3174508 CAAAGTACGTCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGGG 3174449 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || || || ||||| ||| || ||||| | ||| | || || | || ||||| Sbjct 3174448 AATGCCCTCCTTGTCCTGGATCTTAGCCTTGACATTCTCGATGGTGTCCGAGGGCTCGAC 3174389 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 |||| ||| | ||| || || || ||||| || || || ||||||||| Sbjct 3174388 CTCGAGGGTGATGGTCTTGCCAGTCAGAGTCTTGACAAAGATCTGCATG 3174340 Score = 152 bits (168), Expect = 5e-32 Identities = 171/229 (75%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||||||||||| || ||||| ||||| | ||| |||||||| || |||||||||||| Sbjct 3174796 GCCACCGCGCAGGCGGAGCACCAAATGCAAGGTGGACTCCTTCTGGATGTTGTAATCGGA 3174737 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || || || |||||| ||||||||||| ||| |||| ||||||||||| || || || Sbjct 3174736 CAAAGTACGTCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGGG 3174677 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || || || ||||| ||| || ||||| | ||| | || || | || ||||| Sbjct 3174676 AATGCCCTCCTTGTCCTGGATCTTAGCCTTGACATTCTCGATGGTGTCCGAGGGCTCGAC 3174617 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 |||| ||| | ||| || || || ||||| || || || ||||||||| Sbjct 3174616 CTCGAGGGTGATGGTCTTGCCAGTCAGAGTCTTGACAAAGATCTGCATG 3174568 Score = 150 bits (166), Expect = 2e-31 Identities = 170/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||||||||||| || ||||| ||||| | ||| |||||||| || |||||||||||| Sbjct 3174112 GCCACCGCGCAGGCGGAGCACCAAATGCAAGGTGGACTCCTTCTGGATGTTGTAATCGGA 3174053 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || ||| || |||||| ||||||||||| ||| |||| ||||||||||| || || || Sbjct 3174052 CAAGGTACGTCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGGG 3173993 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || || || ||||| ||| || ||||| | ||| | || || | || ||| | Sbjct 3173992 AATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTCTCGATGGTGTCCGAGGGCTCAAC 3173933 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| ||| | ||| || || || || || || ||||| |||||||| Sbjct 3173932 CTCGAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 3173885 Score = 147 bits (162), Expect = 2e-30 Identities = 170/229 (74%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||||||||||| || ||||| ||||| | ||| |||||||| || |||||||| ||| Sbjct 3175024 GCCACCGCGCAGGCGGAGCACCAAATGCAAGGTGGACTCCTTCTGGATGTTGTAGTCGGA 3174965 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || || || |||||| ||||||||||| ||| |||| ||||||||||| || || || Sbjct 3174964 CAAAGTACGTCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGGG 3174905 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || || || ||||| ||| || ||||| | ||| | || || | || ||||| Sbjct 3174904 AATGCCCTCCTTGTCCTGGATCTTAGCCTTGACATTCTCGATGGTGTCCGAGGGCTCGAC 3174845 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 |||| ||| | ||| || || || ||||| || || || ||||||||| Sbjct 3174844 CTCGAGGGTGATGGTCTTGCCAGTCAGAGTCTTGACAAAGATCTGCATG 3174796 Score = 147 bits (162), Expect = 2e-30 Identities = 170/229 (74%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||||||||||| || ||||| ||||| | ||| |||||||| || |||||||| ||| Sbjct 3175708 GCCACCGCGCAGGCGGAGCACCAAATGCAAGGTGGACTCCTTCTGGATGTTGTAGTCGGA 3175649 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || || || |||||| ||||||||||| ||| |||| ||||||||||| || || || Sbjct 3175648 CAAAGTACGTCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGGG 3175589 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || || || ||||| ||| || ||||| | ||| | || || | || ||||| Sbjct 3175588 AATGCCCTCCTTGTCCTGGATCTTAGCCTTGACATTCTCGATGGTGTCCGAGGGCTCGAC 3175529 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 |||| ||| | ||| || || || ||||| || || || ||||||||| Sbjct 3175528 CTCGAGGGTGATGGTCTTGCCAGTCAGAGTCTTGACAAAGATCTGCATG 3175480 Score = 143 bits (158), Expect = 3e-29 Identities = 169/229 (74%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||||||||||| || ||||| ||||| | ||| |||||||| || |||||||| ||| Sbjct 3174340 GCCACCGCGCAGGCGGAGCACCAAATGCAAGGTGGACTCCTTCTGGATGTTGTAGTCGGA 3174281 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || || || |||||| ||||||||||| ||| |||| ||||||||||| || || || Sbjct 3174280 CAAAGTACGTCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGGG 3174221 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || || || ||||| ||| || ||||| | ||| | || || | || ||||| Sbjct 3174220 AATGCCCTCCTTGTCCTGGATCTTAGCCTTGACATTCTCGATGGTGTCCGAGGGCTCGAC 3174161 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 |||| ||| | || || || || ||||| || || || ||||||||| Sbjct 3174160 CTCGAGGGTGATAGTCTTGCCAGTCAGAGTCTTGACAAAGATCTGCATG 3174112 Score = 143 bits (158), Expect = 3e-29 Identities = 169/229 (74%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| ||||||| || ||||| || || | |||||||||||| || |||||||| ||| Sbjct 3175252 GCCTCCGCGCAGGCGGAGCACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGA 3175193 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || || || |||||| ||||||||||| ||| |||| ||||||||||| || || || Sbjct 3175192 CAAAGTACGTCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGGG 3175133 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || || || ||||| ||| || ||||| | ||| | || || | || ||||| Sbjct 3175132 AATGCCCTCCTTGTCCTGGATCTTAGCCTTGACATTCTCGATGGTGTCCGAGGGCTCGAC 3175073 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 |||| ||| | ||| || || || ||||| || || || ||||||||| Sbjct 3175072 CTCGAGGGTGATGGTCTTGCCAGTCAGAGTCTTGACAAAGATCTGCATG 3175024 Score = 129 bits (142), Expect = 6e-25 Identities = 166/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| || || | ||||| || || || | || |||||||| || |||||||||||| Sbjct 3175936 GCCGCCACGAAGACGCAATACCAAGTGCAAAGTGGACTCCTTCTGGATGTTGTAATCGGA 3175877 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || || || |||||| ||||||||||| ||| |||| ||||||||||| || || || Sbjct 3175876 CAAAGTACGTCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGGG 3175817 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || || || ||||| ||| || ||||| | ||| | || || | || ||||| Sbjct 3175816 AATGCCCTCCTTGTCCTGGATCTTAGCCTTGACATTCTCGATGGTGTCCGAGGGCTCGAC 3175757 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 |||| ||| | ||| || || || ||||| || || || ||||||||| Sbjct 3175756 CTCGAGGGTGATGGTCTTGCCAGTCAGAGTCTTGACAAAGATCTGCATG 3175708 >seq6 Length=9197557 Score = 143 bits (158), Expect = 3e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 |||||||| | ||||||||| ||||| | ||||||||||| || |||||||| || Sbjct 543451 CCACCGCGGAGACGCAGCACCAAATGGAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAA 543510 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||||| ||||||||||| ||| |||| | |||||||||||| || ||| Sbjct 543511 AGAGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCAGGGGGG 543570 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 ||||| || ||||| ||| || ||| | | ||| | || |||| | ||| | Sbjct 543571 ATTCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGGATGGCTCCACC 543630 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | |||||| || || ||||| || ||||| |||||||| Sbjct 543631 TCCAGGGTGATGGTTTTTCCAGTCAGAGTCTTCACGAAGATCTGCAT 543677 Score = 140 bits (154), Expect = 3e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 |||||||| | ||||||||| ||||| | ||||||||||| || |||||||| || Sbjct 543907 CCACCGCGGAGACGCAGCACCAAATGGAGAGTCGACTCCTTCTGGATGTTGTAGTCAGAA 543966 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||||| ||||||||||| ||| |||| | |||||||||||| |||||| Sbjct 543967 AGAGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCTGGAGGG 544026 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 ||||| || ||||| ||| || ||| | | ||| | || |||| | ||| | Sbjct 544027 ATTCCCTCCTTGTCCTGGATCTTGGCCTTTACGTTCTCAATGGTGTCGGATGGCTCCACC 544086 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | |||||| ||||| | ||||| || || || ||||| Sbjct 544087 TCCAGGGTGATGGTTTTTCCGGTCAAGGTTTTCACAAAGATTTGCAT 544133 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 |||||||| | ||||||||| ||||| | ||||||||||| || |||||||| || Sbjct 542539 CCACCGCGGAGACGCAGCACCAAATGGAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAA 542598 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||||| ||||||||||| ||| |||| | |||||||||||| || ||| Sbjct 542599 AGAGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCAGGGGGG 542658 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 ||||| || ||||| ||| || ||| | | ||| | || |||| | ||| | Sbjct 542659 ATTCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGGATGGCTCCACC 542718 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | |||||| ||||| | ||||| || || || ||||| Sbjct 542719 TCCAGGGTGATGGTTTTTCCGGTCAAGGTTTTCACAAAGATTTGCAT 542765 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 |||||||| | ||| ||||| ||||| | ||||||||||| || |||||||| || Sbjct 542767 CCACCGCGGAGACGAAGCACCAAATGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAA 542826 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||||| ||||||||||| ||| |||| | |||||||||||| || ||| Sbjct 542827 AGAGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCTGGGGGG 542886 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 ||||| || ||||| ||| || ||| | | ||| | || |||| | ||| | Sbjct 542887 ATTCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGGATGGCTCCACC 542946 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | |||||| ||||| | ||||| || ||||| ||||| Sbjct 542947 TCCAGGGTGATGGTTTTTCCGGTCAAGGTTTTCACAAAAATTTGCAT 542993 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 |||||||| | ||| ||||| ||||| | ||||||||||| || |||||||| || Sbjct 543223 CCACCGCGGAGACGAAGCACCAAATGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAA 543282 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||||| ||||||||||| ||| |||| | |||||||||||| || ||| Sbjct 543283 AGAGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCAGGGGGG 543342 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 ||||| || ||||| ||| || ||| | | ||| | || |||| | ||| | Sbjct 543343 ATTCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGGATGGCTCCACC 543402 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | |||||| ||||| | ||||| || ||||| ||||| Sbjct 543403 TCCAGGGTGATGGTTTTTCCGGTCAAGGTTTTCACAAAAATTTGCAT 543449 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 |||||||| | ||||||||| ||||| | ||||||||||| || |||||||| || Sbjct 543679 CCACCGCGGAGACGCAGCACCAAATGGAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAA 543738 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||||| ||||||||||| ||| |||| | |||||||||||| || ||| Sbjct 543739 AGAGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCAGGGGGG 543798 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 ||||| || ||||| ||| || ||| | | ||| | || |||| | ||| | Sbjct 543799 ATTCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGGATGGCTCCACC 543858 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | |||||| ||||| | ||||| || || || ||||| Sbjct 543859 TCCAGGGTGATGGTTTTTCCGGTCAAGGTTTTCACAAAGATTTGCAT 543905 Score = 131 bits (144), Expect = 2e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 |||||||| | ||||||||| ||||| | ||||||||||| || |||||||| || Sbjct 544135 CCACCGCGGAGACGCAGCACCAAATGGAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAA 544194 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||||| || |||||||| ||| |||| | |||||||||||| || ||| Sbjct 544195 AGAGTGCGGCCATCCTCCAGTTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCTGGGGGG 544254 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 ||||| || ||||| ||| || ||| | | ||| | || |||| | ||| | Sbjct 544255 ATTCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGGATGGCTCCACC 544314 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | |||||| || || | ||||| || || |||||||| Sbjct 544315 TCCAGGGTGATGGTTTTTCCAGTCAAGGTTTTCACAAAGATCTGCAT 544361 Score = 125 bits (138), Expect = 7e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 |||||||| | ||| ||||| ||||| | ||||||||||| || |||||||| || Sbjct 542995 CCACCGCGGAGACGAAGCACCAAATGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAA 543054 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||||| |||||||| || ||| |||| | |||||||||||| || ||| Sbjct 543055 AGAGTGCGGCCATCCTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCTGGGGGG 543114 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 ||||| || ||||| ||| || ||| | | ||| | || |||| | ||| | Sbjct 543115 ATTCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGGATGGCTCCACC 543174 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | |||||| ||||| | ||||| || || || ||||| Sbjct 543175 TCCAGGGTGATGGTTTTTCCGGTCAAGGTTTTCACAAAGATTTGCAT 543221 Score = 120 bits (132), Expect = 3e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || || | ||||||||| ||||| | ||||||||||| || |||||||| || Sbjct 542311 CCGCCACGGAGACGCAGCACCAAATGGAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAA 542370 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| || || ||||||||||| ||| |||| | |||||||||||| || ||| Sbjct 542371 AGAGTGCGGCCATCTTCCAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCTGGGGGG 542430 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGC-TTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||||| || ||||| ||| | | || || | | ||| | || || | | |||| Sbjct 542431 ATTCCCTCCTTGTC-CTGAATCTTGGCTTTCACGTTCTCAATGGTGTCAGAAGGTTCGAC 542489 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||||| ||||| || || ||||| || |||||||| ||||| Sbjct 542490 CTCCAGGGTAATAGTTTTTCCAGTCAGAGTCTTCACGAAAATTTGCAT 542537 >seq12 Length=1235759 Score = 140 bits (154), Expect = 3e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 |||||||||| || ||||| || || | |||||||||||| || |||||||| ||| | Sbjct 219394 CCACCGCGCAGGCGGAGCACCAAGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAC 219335 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||||| ||||||||||| ||| |||| | ||||||||| || || || Sbjct 219334 AGAGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGGGGA 219275 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||||| | ||| | || || | || ||||| Sbjct 219274 ATGCCCTCCTTGTCCTGGATCTTAGCCTTGACATTCTCGATGGTGTCAGAGGGCTCGACC 219215 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | ||| || || || |||||||| ||||| || ||||| Sbjct 219214 TCCAAGGTGATGGTCTTGCCAGTGAGAGTTTTCACGAAGATTTGCAT 219168 >seq10 Length=19787792 Score = 132 bits (146), Expect = 5e-26 Identities = 471/720 (65%), Gaps = 32/720 (4%) Strand=Plus/Minus Query 45787 TGGAAGGTGGAGGAGGTGGATTTGTCGAAAGACTGCGATG-ACTT--CACGTCTAAATTG 45843 |||| ||||| ||||||||| | || || ||| |||| | ||| | ||||| | | Sbjct 12208551 TGGACTGTGGAAGAGGTGGATCTATCAAAGGAC-GCGACGGACTGGGCCCGTCTCACT-- 12208495 Query 45844 AACGATGACGAGCGCTATTTTATAAAGCACGTGTTAGCtttttttGCGGCCGCCGACAGC 45903 || |||||||||| ||||| || ||| | || || || || ||| | ||| || Sbjct 12208494 ---GACAACGAGCGCTACTTTATCTCCCATGTGCTGGCCTTCTTCGCTGCCTCGGACGGC 12208438 Query 45904 ATTGTCAACATTAATTTGATCGAGTACATGCAGCAGAACGTGCCGGAGCTAGAGGCGCAA 45963 ||||| ||| ||| || ||||| | | ||| | |||| | |||||| | Sbjct 12208437 ATTGTTAACGAGAATCTGGTCGAGCGCTTTAGTCAGGAGGTGCAGATCACAGAGGCACGT 12208378 Query 45964 TACTTTTACAACCAGCAAGTGCTCATCGAGTGCGTGCACACGGAGATGTACAATTTGTTA 46023 | ||| ||| | || | ||| ||| |||||| | |||||||||| || | Sbjct 12208377 TGCTTCTACGGCTTCCAGATAGCCATGGAGAATGTGCACTCCGAGATGTACAGCGTGCTC 12208318 Query 46024 ATTCACCAGTTGATTTCGGACGAACACGAGCGCGACACGCTGCTTAATGCGTTTGAACGT 46083 ||| || | || ||| || ||||||||| || | ||||| |||| Sbjct 12208317 ATTGACACCTACATACGGGAGCCGCAGGAGCGCGACTACTTGTTCAATGCTATTGAGACC 12208258 Query 46084 ATGCCGTGCGT---GCGCAAGAAAACCGACTGGGCGATGAAGTGGATCAACAGCAGCACC 46140 |||||| || ||||||| | |||||||| ||| ||||| | | | | | Sbjct 12208257 ATGCCGGCTGTAAAGCGCAAGG---CGGACTGGGCCATGTCCTGGAT-ATCCTCGAAATC 12208202 Query 46141 G--CGACTTTCGCCGAGCGTATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTG 46198 | | ||||| ||||||||||| | ||||||||| ||||| || |||| ||| || Sbjct 12208201 GGCCAACTTT-GCCGAGCGTATTATTGCCTTTGCGGCCGTGGAAGGAATCTTCTTTAGTG 12208143 Query 46199 GCAGTTTTGCCGCCATCTTTTACATCAA-AACCAAGGGCATCATGCCCGGCCTGACGTTT 46257 |||| |||||| | ||||||| | || || | || | |||||||||| ||||| || Sbjct 12208142 GCAGCTTTGCCTCGATCTTTTGGCTGAAGAAGCGTGGTC-TCATGCCCGGTCTGACCTTC 12208084 Query 46258 AGCAACGAGCTGATATCGCGCGACGAGGGCCTGCATACGGACTTTGCGTGTCTCTACTAT 46317 |||||||||||| || || ||||| || || || ||||||||| ||| ||| Sbjct 12208083 TCCAACGAGCTGATCTCCCGTGACGAAGGTCTTCACTGCGACTTTGCGGTGCTCATGTAT 12208024 Query 46318 AACACTCGCGTGCA-CG--ACAAGCTTGCGCCCGACACCGTGCTGAGCATGTTCAAGGAG 46374 || || ||||| || ||||| | || | || || | || ||| ||| Sbjct 12208023 CACCATCTAGTGCAGCGGCCCAAGCGGGAGCGCATCATCGAG------ATCATCAGGGAT 12207970 Query 46375 GCGGTGGCCATTGAGAAGGAGTTTTTTACGGCCGCACTGCCCGCTGCCCTGCTGGGCATG 46434 || |||| || ||| ||||||| | || | || ||||||| || | |||||| Sbjct 12207969 GCTGTGGAAATCGAGCAGGAGTTCCTCACTGAAGCCCTGCCCGTCAATTTGATTGGCATG 12207910 Query 46435 AAC-GCACAGTCAATGTGCGACTACATCGAGTTTGTAGCGGACCGACTGCTCGTGCAGCT 46493 ||| | || |||| | | ||||||||||| || || || || ||||| | | |||| Sbjct 12207909 AACTGTGTTCTC-ATGTCCCAGTACATCGAGTTCGTGGCCGATCGGCTGCTAGGGGAGCT 12207851 >seq4631 Length=7852 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | || || |||||||| | ||| |||||||| |||||||| ||||| | Sbjct 715 CCACCACGAAGCCGAAGTACTAAATGCAAGGTAGACTCCTTCTGAATGTTATAATCAGAC 656 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || || || | |||||||| ||| |||| |||||||| || || ||||| Sbjct 655 AGTGTTCGGCCATCTTCCAATTGCTTGCCAGCGAAGATCAAACGCTGTTGATCTGGAGGA 596 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 |||||||||||||| ||| || |||| | || | ||||| | | |||| Sbjct 595 ATTCCTTCTTTGTCCTGGATCTTGGCTTTGACATTTTCGATGGTATCCGACGGTTCGACC 536 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 || | || | ||| || || ||||| || ||||| || ||||||||| Sbjct 535 TCAAGAGTTATGGTCTTGCCCGTTAGGGTCTTTACAAAGATCTGCATG 488 >seq7 Length=13333775 Score = 109 bits (120), Expect = 5e-19 Identities = 243/358 (68%), Gaps = 20/358 (6%) Strand=Plus/Minus Query 51597 TTACATTTAGGCAATAATACCGATAATGCCGCAGCCGAGTCGTCCGCCCGAATTGCCGGT 51656 ||| |||| |||||| || || | |||||||| | || |||| | ||||||||| Sbjct 10666543 TTAGATTTTGGCAATG---CCAATGACACCGCAGCCAATACGGGCGCCGGCATTGCCGGT 10666487 Query 51657 CGTCTTGCTGAGCGGGTGATCGGTTAGGCCTAGGTCGTC-GCGATCGGCGTGCACGACCA 51715 |||||||| ||| |||| | ||| | ||| || ||| |||||||| ||||||| Sbjct 10666486 GGTCTTGCTTAGCTCGTGACCACCCTTGCCCAAGTCATCAGCG-TCGGCGTGAACGACCA 10666428 Query 51716 AACTCCTACCGATCACACTGTACTCACCGAACAGGGACATGACGTTA---TCTATTTTAT 51772 | | || || | || | |||||||||| | ||| || || | | Sbjct 10666427 CGGTGCGTCCTATGATGCTATCGGCACCGAACAGCG---TGATCTTCGAGTCGGTGATGC 10666371 Query 51773 CGATGGCGGTGAGGGAGTAGGACGCTTTGGCCTCTATGTTGCCGAGATCGCCCACGTGTC 51832 || ||| ||| || || ||| |||| |||||||| | ||||||| ||| | Sbjct 10666370 TGACGGCCGTGGGGCTGTCACCGGCT---GCCTGGATGTTGCCCAAGTCGCCCAAGTGGC 10666314 Query 51833 G---CTCGGCGGAGTTGGGTGCGCCGTGGTGTTTGCCAAGGGGATTAAAGTGCTCGCCGG 51889 | |||| ||| |||| || ||||| | ||| |||| |||||||| ||||| Sbjct 10666313 GGTTCTCGTCGG---TGGGGGCACCGTGCTCCTTGTTCCGGGGGTTAAAGTGGGGGCCGG 10666257 Query 51890 CGGACGTGCACCCGTTGCTGGTGTCGCCGAACTCGTGCACGTGAAAGCCGTGCAGTCC 51947 ||| |||| |||||| || |||| |||||||||||||| || || ||||||||||| Sbjct 10666256 ACGACATGCAGCCGTTGGTGTTGTCCCCGAACTCGTGCACATGGAATCCGTGCAGTCC 10666199 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471984538233600