Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20pseudoobscura_20pseudoobscura_20[refseq_20GCF_5F0000017
65.3_202013-04-11] 4,790 sequences; 152,696,384 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq12 123 2e-23
seq6 123 2e-23
seq3 116 3e-21
>seq12
Length=1235759
Score = 123 bits (136), Expect = 2e-23
Identities = 166/231 (72%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275
|| |||||||| || || |||||| | || || || || |||| | || || || ||
Sbjct 219165 AAAATGCAAATCTTCGTGAAAACTCTCACTGGCAAGACCATCACCTTGGAGGTCGAGCCC 219224
Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335
| || ||| | || || |||| || || || ||||||||||| ||||| || |||
Sbjct 219225 TCTGACACCATCGAGAATGTCAAGGCTAAGATCCAGGACAAGGAGGGCATTCCCCCAGAT 219284
Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395
|| || ||||| || || |||||||| ||| | |||||| |||||| | ||||| |||
Sbjct 219285 CAGCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGCACTCTGTCCGACTAC 219344
Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
||||| || || || || ||| | || || || | || ||||||| |||
Sbjct 219345 AACATCCAGAAGGAGTCGACCCTGCACTTGGTGCTCCGCCTGCGCGGTGGT 219395
>seq6
Length=9197557
Score = 123 bits (136), Expect = 2e-23
Identities = 164/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||| ||||| ||||| || ||||| ||||| |||| || || ||||| | ||
Sbjct 542765 ATGCAAATCTTTGTGAAAACCTTGACCGGAAAAACCATCACCCTGGAGGTGGAGCCATCC 542706
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | || | | || || || || ||||||||||| || || || || ||
Sbjct 542705 GACACCATTGAGAACGTGAAGGCCAAGATCCAGGACAAGGAGGGAATCCCCCCTGACCAG 542646
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| ||||| || || |||||||| ||| | |||||| |||||| | || || ||||||
Sbjct 542645 CAGCGTCTCATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGCACTCTTTCGGACTACAAC 542586
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| || || || || || | ||||| || |||| | ||||| |||
Sbjct 542585 ATCCAGAAGGAGTCGACTCTCCATTTGGTGCTGCGTCTCCGCGGTGGT 542538
Score = 123 bits (136), Expect = 2e-23
Identities = 164/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||||||||| ||||| || ||||| ||||| |||| || || ||||| | ||
Sbjct 542993 ATGCAAATTTTTGTGAAAACCTTGACCGGAAAAACCATCACCCTGGAGGTGGAGCCATCC 542934
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | || | | || || || || ||||||||||| || || || || ||
Sbjct 542933 GACACCATTGAGAACGTGAAGGCCAAGATCCAGGACAAGGAGGGAATCCCCCCAGACCAG 542874
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| ||||| || || |||||||| ||| | |||||| |||||| | || || ||||||
Sbjct 542873 CAGCGTCTCATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGCACTCTTTCGGACTACAAC 542814
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| || || || || || | ||||| || | || | ||||| |||
Sbjct 542813 ATCCAGAAGGAGTCGACTCTGCATTTGGTGCTTCGTCTCCGCGGTGGT 542766
Score = 123 bits (136), Expect = 2e-23
Identities = 164/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||||||||| ||||| || ||||| ||||| |||| || || ||||| | ||
Sbjct 543449 ATGCAAATTTTTGTGAAAACCTTGACCGGAAAAACCATCACCCTGGAGGTGGAGCCATCC 543390
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | || | | || || || || ||||||||||| || || || || ||
Sbjct 543389 GACACCATTGAGAACGTGAAGGCCAAGATCCAGGACAAGGAGGGAATCCCCCCTGACCAG 543330
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| ||||| || || |||||||| ||| | |||||| |||||| | || || ||||||
Sbjct 543329 CAGCGTCTCATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGCACTCTTTCGGACTACAAC 543270
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| || || || || || | ||||| || | || | ||||| |||
Sbjct 543269 ATCCAGAAGGAGTCGACTCTGCATTTGGTGCTTCGTCTCCGCGGTGGT 543222
Score = 123 bits (136), Expect = 2e-23
Identities = 164/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||| ||||| ||||| || ||||| ||||| |||| || || ||||| | ||
Sbjct 543905 ATGCAAATCTTTGTGAAAACCTTGACCGGAAAAACCATCACCCTGGAGGTGGAGCCATCC 543846
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | || | | || || || || ||||||||||| || || || || ||
Sbjct 543845 GACACCATTGAGAACGTGAAGGCCAAGATCCAGGACAAGGAGGGAATCCCCCCTGACCAG 543786
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| ||||| || || |||||||| ||| | |||||| |||||| | || || ||||||
Sbjct 543785 CAGCGTCTCATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGCACTCTTTCGGACTACAAC 543726
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| || || || || || | ||||| || |||| | ||||| |||
Sbjct 543725 ATCCAGAAGGAGTCGACTCTCCATTTGGTGCTGCGTCTCCGCGGTGGT 543678
Score = 123 bits (136), Expect = 2e-23
Identities = 164/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||| ||||| ||||| || ||||| ||||| |||| || || ||||| | ||
Sbjct 544133 ATGCAAATCTTTGTGAAAACCTTGACCGGAAAAACCATCACCCTGGAGGTGGAGCCATCC 544074
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | || | | || || || || ||||||||||| || || || || ||
Sbjct 544073 GACACCATTGAGAACGTAAAGGCCAAGATCCAGGACAAGGAGGGAATCCCTCCAGACCAG 544014
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| ||||| || || |||||||| ||| | |||||| |||||| | || || ||||||
Sbjct 544013 CAGCGTCTCATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGCACTCTTTCTGACTACAAC 543954
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| || || || || || | ||||| || |||| | ||||| |||
Sbjct 543953 ATCCAGAAGGAGTCGACTCTCCATTTGGTGCTGCGTCTCCGCGGTGGT 543906
Score = 114 bits (126), Expect = 1e-20
Identities = 162/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||| ||||| ||||| || ||||| ||||| |||| || || ||||| | ||
Sbjct 543221 ATGCAAATCTTTGTGAAAACCTTGACCGGAAAAACCATCACCCTGGAGGTGGAGCCATCC 543162
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | || | | || || || || ||||||||||| || || || || ||
Sbjct 543161 GACACCATTGAGAACGTGAAGGCCAAGATCCAGGACAAGGAGGGAATCCCCCCAGACCAG 543102
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| ||||| || || ||||| || ||| | |||||| |||||| | || || ||||||
Sbjct 543101 CAGCGTCTCATCTTCGCCGGAAAGCAGCTGGAGGATGGCCGCACTCTTTCGGACTACAAC 543042
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| || || || || || | ||||| || | || | ||||| |||
Sbjct 543041 ATCCAGAAGGAGTCGACTCTGCATTTGGTGCTTCGTCTCCGCGGTGGT 542994
Score = 111 bits (122), Expect = 1e-19
Identities = 163/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275
|| ||||| || ||||| ||||| || || || ||||| |||| || || ||||| |
Sbjct 544364 AAAATGCAGATCTTTGTGAAAACCTTGACTGGAAAAACCATCACCCTGGAGGTGGAGCCA 544305
Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335
|||| ||| | || | | || || || || ||||||||||| || || || ||
Sbjct 544304 TCCGACACCATTGAGAACGTGAAGGCCAAGATCCAGGACAAGGAGGGAATCCCCCCAGAC 544245
Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395
|| || ||||| || || |||||||| || | |||||| |||||| | || || |||
Sbjct 544244 CAGCAGCGTCTCATCTTCGCCGGCAAGCAACTGGAGGATGGCCGCACTCTTTCGGACTAC 544185
Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
||||| || || || || || | ||||| || |||| | ||||| |||
Sbjct 544184 AACATCCAGAAGGAGTCGACTCTCCATTTGGTGCTGCGTCTCCGCGGTGGT 544134
Score = 105 bits (116), Expect = 6e-18
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || || || || ||| | || || ||||| |||| || || ||||| | ||
Sbjct 543677 ATGCAGATCTTCGTGAAGACTCTGACTGGAAAAACCATCACCCTGGAGGTGGAGCCATCC 543618
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | || | | || || || || ||||||||||| || || || || ||
Sbjct 543617 GACACCATTGAGAACGTGAAGGCCAAGATCCAGGACAAGGAGGGAATCCCCCCTGACCAG 543558
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| ||||| || || |||||||| ||| | |||||| |||||| | || || ||||||
Sbjct 543557 CAGCGTCTCATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGCACTCTTTCGGACTACAAC 543498
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| || || || || || | ||||| || |||| | ||||| |||
Sbjct 543497 ATCCAGAAGGAGTCGACTCTCCATTTGGTGCTGCGTCTCCGCGGTGGT 543450
Score = 100 bits (110), Expect = 2e-16
Identities = 151/215 (70%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||||||||| || || ||| | || || ||||| | || || || || ||| | |
Sbjct 542537 ATGCAAATTTTCGTGAAGACTCTGACTGGAAAAACTATTACCCTGGAGGTCGAACCTTCT 542478
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | || | | ||| || ||||| ||||||||||| || || || || ||
Sbjct 542477 GACACCATTGAGAACGTGAAAGCCAAGATTCAGGACAAGGAGGGAATCCCCCCAGACCAG 542418
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| ||||| || || || ||||| ||| | || ||| |||||| | || || ||||||
Sbjct 542417 CAGCGTCTCATCTTCGCTGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCGGACTACAAC 542358
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCG 22433
|| || || || || || | ||||| || ||||
Sbjct 542357 ATCCAGAAGGAGTCGACTCTCCATTTGGTGCTGCG 542323
>seq3
Length=12541198
Score = 116 bits (128), Expect = 3e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || ||||| || ||| | || || || || |||| || || || || || |
Sbjct 3174341 ATGCAGATCTTTGTCAAGACTCTGACTGGCAAGACCATCACCCTCGAGGTCGAGCCCTCG 3174400
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | || || |||| || || || ||||||||||| ||||| || |||||
Sbjct 3174401 GACACCATCGAGAATGTCAAGGCTAAGATCCAGGACAAGGAGGGCATTCCCCCAGATCAG 3174460
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| ||| | || || |||||||| ||| | ||||| || || | ||||||||||||
Sbjct 3174461 CAGCGTTTGATCTTCGCCGGCAAGCAGCTGGAGGACGGACGTACTTTGTCCGATTACAAC 3174520
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445
|| || || || |||||| | ||||| || | || ||||||| ||
Sbjct 3174521 ATCCAGAAGGAGTCCACCTTGCATTTGGTGCTCCGCCTGCGCGGTGG 3174567
Score = 116 bits (128), Expect = 3e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || ||||| || ||| | || || || || |||| || || || || || |
Sbjct 3174569 ATGCAGATCTTTGTCAAGACTCTGACTGGCAAGACCATCACCCTCGAGGTCGAGCCCTCG 3174628
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | || || |||| || || || ||||||||||| ||||| || |||||
Sbjct 3174629 GACACCATCGAGAATGTCAAGGCTAAGATCCAGGACAAGGAGGGCATTCCCCCAGATCAG 3174688
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| ||| | || || |||||||| ||| | ||||| || || | ||||||||||||
Sbjct 3174689 CAGCGTTTGATCTTCGCCGGCAAGCAGCTGGAGGACGGACGTACTTTGTCCGATTACAAC 3174748
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445
|| || || || |||||| | ||||| || | || ||||||| ||
Sbjct 3174749 ATCCAGAAGGAGTCCACCTTGCATTTGGTGCTCCGCCTGCGCGGTGG 3174795
Score = 113 bits (124), Expect = 4e-20
Identities = 163/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275
|| ||||| || || || || || | || || || || |||| || || || || ||
Sbjct 3173882 AAAATGCAGATCTTCGTGAAGACCCTGACTGGCAAGACCATCACCCTCGAGGTTGAGCCC 3173941
Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335
| || ||| | || || |||| || || || ||||||||||| ||||| || |||
Sbjct 3173942 TCGGACACCATCGAGAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCAGAT 3174001
Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395
|| || ||| | || || |||||||| ||| | ||||| || ||| | |||||||||
Sbjct 3174002 CAGCAGCGTTTGATCTTCGCCGGCAAGCAGCTGGAGGACGGACGTACCTTGTCCGATTAC 3174061
Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445
||||| || || || |||||| | ||||| || | || ||||||| ||
Sbjct 3174062 AACATCCAGAAGGAGTCCACCTTGCATTTGGTGCTCCGCCTGCGCGGTGG 3174111
Score = 113 bits (124), Expect = 4e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || ||||| || ||| | || || || || |||| || || || || || |
Sbjct 3174113 ATGCAGATCTTTGTCAAGACTCTGACTGGCAAGACTATCACCCTCGAGGTCGAGCCCTCG 3174172
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | || || |||| || || || ||||||||||| ||||| || |||||
Sbjct 3174173 GACACCATCGAGAATGTCAAGGCTAAGATCCAGGACAAGGAGGGCATTCCCCCAGATCAG 3174232
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| ||| | || || |||||||| ||| | ||||| || || | ||||| ||||||
Sbjct 3174233 CAGCGTTTGATCTTCGCCGGCAAGCAGCTGGAGGACGGACGTACTTTGTCCGACTACAAC 3174292
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445
|| || || || |||||| | ||||| || | || ||||||| ||
Sbjct 3174293 ATCCAGAAGGAGTCCACCTTGCATTTGGTGCTCCGCCTGCGCGGTGG 3174339
Score = 113 bits (124), Expect = 4e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || ||||| || ||| | || || || || |||| || || || || || |
Sbjct 3174797 ATGCAGATCTTTGTCAAGACTCTGACTGGCAAGACCATCACCCTCGAGGTCGAGCCCTCG 3174856
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | || || |||| || || || ||||||||||| ||||| || |||||
Sbjct 3174857 GACACCATCGAGAATGTCAAGGCTAAGATCCAGGACAAGGAGGGCATTCCCCCAGATCAG 3174916
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| ||| | || || |||||||| ||| | ||||| || || | ||||| ||||||
Sbjct 3174917 CAGCGTTTGATCTTCGCCGGCAAGCAGCTGGAGGACGGACGTACTTTGTCCGACTACAAC 3174976
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445
|| || || || |||||| | ||||| || | || ||||||| ||
Sbjct 3174977 ATCCAGAAGGAGTCCACCTTGCATTTGGTGCTCCGCCTGCGCGGTGG 3175023
Score = 113 bits (124), Expect = 4e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || || || || ||| | || || || || |||| || || || || || |
Sbjct 3175253 ATGCAGATCTTCGTGAAGACTCTGACTGGCAAGACCATCACCCTCGAGGTCGAGCCCTCG 3175312
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | || || |||| || || || ||||||||||| ||||| || |||||
Sbjct 3175313 GACACCATCGAGAATGTCAAGGCTAAGATCCAGGACAAGGAGGGCATTCCCCCAGATCAG 3175372
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| ||| | || || |||||||| ||| | ||||| || || | ||||||||||||
Sbjct 3175373 CAGCGTTTGATCTTCGCCGGCAAGCAGCTGGAGGACGGACGTACTTTGTCCGATTACAAC 3175432
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445
|| || || || |||||| | ||||| || | || ||||||| ||
Sbjct 3175433 ATCCAGAAGGAGTCCACCTTGCATTTGGTGCTCCGCCTGCGCGGTGG 3175479
Score = 113 bits (124), Expect = 4e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || ||||| || ||| | || || || || |||| || || || || || |
Sbjct 3175481 ATGCAGATCTTTGTCAAGACTCTGACTGGCAAGACCATCACCCTCGAGGTCGAGCCCTCG 3175540
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | || || |||| || || || ||||||||||| ||||| || |||||
Sbjct 3175541 GACACCATCGAGAATGTCAAGGCTAAGATCCAGGACAAGGAGGGCATTCCCCCAGATCAG 3175600
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| ||| | || || |||||||| ||| | ||||| || || | ||||| ||||||
Sbjct 3175601 CAGCGTTTGATCTTCGCCGGCAAGCAGCTGGAGGACGGACGTACTTTGTCCGACTACAAC 3175660
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445
|| || || || |||||| | ||||| || | || ||||||| ||
Sbjct 3175661 ATCCAGAAGGAGTCCACCTTGCATTTGGTGCTCCGCCTGCGCGGTGG 3175707
Score = 109 bits (120), Expect = 5e-19
Identities = 153/215 (71%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || ||||| || ||| | || || || || |||| || || || || || |
Sbjct 3175709 ATGCAGATCTTTGTCAAGACTCTGACTGGCAAGACCATCACCCTCGAGGTCGAGCCCTCG 3175768
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | || || |||| || || || ||||||||||| ||||| || |||||
Sbjct 3175769 GACACCATCGAGAATGTCAAGGCTAAGATCCAGGACAAGGAGGGCATTCCCCCAGATCAG 3175828
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| ||| | || || |||||||| ||| | ||||| || || | ||||||||||||
Sbjct 3175829 CAGCGTTTGATCTTCGCCGGCAAGCAGCTGGAGGACGGACGTACTTTGTCCGATTACAAC 3175888
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCG 22433
|| || || || ||||| | || || || |||||
Sbjct 3175889 ATCCAGAAGGAGTCCACTTTGCACTTGGTATTGCG 3175923
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || ||||| || ||| | || || || || |||| || || || || || |
Sbjct 3175025 ATGCAGATCTTTGTCAAGACTCTGACTGGCAAGACCATCACCCTCGAGGTCGAGCCCTCG 3175084
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | || || |||| || || || ||||||||||| ||||| || |||||
Sbjct 3175085 GACACCATCGAGAATGTCAAGGCTAAGATCCAGGACAAGGAGGGCATTCCCCCAGATCAG 3175144
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| ||| | || || |||||||| ||| | ||||| || || | ||||| ||||||
Sbjct 3175145 CAGCGTTTGATCTTCGCCGGCAAGCAGCTGGAGGACGGACGTACTTTGTCCGACTACAAC 3175204
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445
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Sbjct 3175205 ATCCAGAAGGAGTCGACCCTCCACTTGGTGCTCCGCCTGCGCGGAGG 3175251
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419703497066350
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