Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20pseudoobscura_20pseudoobscura_20[refseq_20GCF_5F0000017
65.3_202013-04-11] 4,790 sequences; 152,696,384 total letters
Query= NC_008953.1
Length=3935
Score E
Sequences producing significant alignments: (Bits) Value
seq3 107 5e-20
>seq3
Length=12541198
Score = 107 bits (118), Expect = 5e-20
Identities = 112/147 (76%), Gaps = 0/147 (0%)
Strand=Plus/Plus
Query 3334 CCCATGAAGCGAGTCTTTCCAACAATCACTCGATGTACTTTTCACAAATACGGTCCTTCG 3393
|| ||| ||| |||||||||| |||| |||||| || |||||||||||||| ||
Sbjct 6788487 CCGATGGCGCGGGTCTTTCCAAAGGTCACGAAATGTACGTTCCACAAATACGGTCCCTCC 6788546
Query 3394 GGCTCCCTGGAAAACTACGAGGGACTCTGCATCCTCCCGGAGAACGTGGTCAACGAGAAG 3453
||| || | || | ||| ||||| ||| | || ||| ||| | ||||||||||||
Sbjct 6788547 GGCGATGTGCAGAAGTTCGACGGACTGTGCGTGCTGCCGTTAAACATTGTCAACGAGAAG 6788606
Query 3454 ATCTACATTTTCCTCTGGTTCTGGTTC 3480
|||||| | ||||| ||||||||||||
Sbjct 6788607 ATCTACGTGTTCCTGTGGTTCTGGTTC 6788633
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 12479346165000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |