Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20pseudoobscura_20pseudoobscura_20[refseq_20GCF_5F0000017 65.3_202013-04-11] 4,790 sequences; 152,696,384 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq4631 127 2e-24 seq6 125 6e-24 seq3 114 1e-20 >seq4631 Length=7852 Score = 127 bits (140), Expect = 2e-24 Identities = 168/233 (72%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 114156 CCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTC 114215 || ||||| || | | |||||||| | ||||| || || |||||||| ||||| | Sbjct 715 CCACCACGAAGCCGAAGTACTAAATGCAAGGTAGACTCCTTCTGAATGTTATAATCAGAC 656 Query 114216 ATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGA 114275 | || || |||||| | ||| || |||||| |||| | ||||||||| || |||||| Sbjct 655 AGTGTTCGGCCATCTTCCAATTGCTTGCCAGCGAAGATCAAACGCTGTTGATCTGGAGGA 596 Query 114276 ATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACG 114335 || ||||||||||| ||||| ||| | | ||| | ||| || | | |||||| Sbjct 595 ATTCCTTCTTTGTCCTGGATCTTGGCTTTGACATTTTCGATGGTATCCGACGGTTCGACC 536 Query 114336 TCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCTTA 114388 || | || | || ||||| || || || |||||||| |||||||||| ||| Sbjct 535 TCAAGAGTTATGGTCTTGCCCGTTAGGGTCTTTACAAAGATCTGCATGGTTTA 483 >seq6 Length=9197557 Score = 125 bits (138), Expect = 6e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 114156 CCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTC 114215 |||||||| || | || || ||||| | || || || || || |||||||| || Sbjct 542311 CCGCCACGGAGACGCAGCACCAAATGGAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAA 542370 Query 114216 ATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGA 114275 | ||| || |||||| || || || |||||| ||||||||||||| ||||| || || Sbjct 542371 AGAGTGCGGCCATCTTCCAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCTGGGGGG 542430 Query 114276 ATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACG 114335 || || || ||||| |||||| ||| | | |||| |||||| | | |||||| Sbjct 542431 ATTCCCTCCTTGTCCTGAATCTTGGCTTTCACGTTCTCAATGGTGTCAGAAGGTTCGACC 542490 Query 114336 TCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 |||| ||| | ||||| || |||||||| || || ||||| ||||| Sbjct 542491 TCCAGGGTAATAGTTTTTCCAGTCAGAGTCTTCACGAAAATTTGCAT 542537 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || || || | || || ||||| | || || || || || |||||||| || Sbjct 543904 ATACCACCGCGGAGACGCAGCACCAAATGGAGAGTCGACTCCTTCTGGATGTTGTAGTCA 543963 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||| || ||| || || || || || ||| ||||||||||||| ||||| ||| Sbjct 543964 GAAAGAGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCTGGA 544023 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || || || || ||||| ||||| |||| | |||| |||||||| | || Sbjct 544024 GGGATTCCCTCCTTGTCCTGGATCTTGGCCTTTACGTTCTCAATGGTGTCGGATGGCTCC 544083 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| ||| | ||||| ||||||| ||||| ||||| || ||||| Sbjct 544084 ACCTCCAGGGTGATGGTTTTTCCGGTCAAGGTTTTCACAAAGATTTGCAT 544133 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || || || | || || ||||| | || || || || || |||||||| || Sbjct 544132 ATACCACCGCGGAGACGCAGCACCAAATGGAGAGTCGACTCCTTCTGGATGTTGTAGTCC 544191 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||| || ||| || ||||| || || ||| ||||||||||||| ||||| || Sbjct 544192 GAAAGAGTGCGGCCATCCTCCAGTTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCTGGG 544251 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || || || || ||||| ||||| || | | |||| |||||||| | || Sbjct 544252 GGGATTCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGGATGGCTCC 544311 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| ||| | ||||| || |||| ||||| ||||| |||||||| Sbjct 544312 ACCTCCAGGGTGATGGTTTTTCCAGTCAAGGTTTTCACAAAGATCTGCAT 544361 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || || || | || || ||||| | || || || || || |||||||| || Sbjct 542536 ATACCACCGCGGAGACGCAGCACCAAATGGAGAGTCGACTCCTTCTGGATGTTGTAGTCC 542595 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||| || ||| || || || || || ||| ||||||||||||| ||||| || Sbjct 542596 GAAAGAGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCAGGG 542655 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || || || || ||||| ||||| || | | |||| |||||||| | || Sbjct 542656 GGGATTCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGGATGGCTCC 542715 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| ||| | ||||| ||||||| ||||| ||||| || ||||| Sbjct 542716 ACCTCCAGGGTGATGGTTTTTCCGGTCAAGGTTTTCACAAAGATTTGCAT 542765 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || || || | | || ||||| | || || || || || |||||||| || Sbjct 542764 ATACCACCGCGGAGACGAAGCACCAAATGCAGAGTCGACTCCTTCTGGATGTTGTAGTCC 542823 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||| || ||| || || || || || ||| ||||||||||||| ||||| || Sbjct 542824 GAAAGAGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCTGGG 542883 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || || || || ||||| ||||| || | | |||| |||||||| | || Sbjct 542884 GGGATTCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGGATGGCTCC 542943 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| ||| | ||||| ||||||| ||||| |||||||| ||||| Sbjct 542944 ACCTCCAGGGTGATGGTTTTTCCGGTCAAGGTTTTCACAAAAATTTGCAT 542993 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || || || | | || ||||| | || || || || || |||||||| || Sbjct 543220 ATACCACCGCGGAGACGAAGCACCAAATGCAGAGTCGACTCCTTCTGGATGTTGTAGTCC 543279 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||| || ||| || || || || || ||| ||||||||||||| ||||| || Sbjct 543280 GAAAGAGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCAGGG 543339 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || || || || ||||| ||||| || | | |||| |||||||| | || Sbjct 543340 GGGATTCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGGATGGCTCC 543399 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| ||| | ||||| ||||||| ||||| |||||||| ||||| Sbjct 543400 ACCTCCAGGGTGATGGTTTTTCCGGTCAAGGTTTTCACAAAAATTTGCAT 543449 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || || || | || || ||||| | || || || || || |||||||| || Sbjct 543448 ATACCACCGCGGAGACGCAGCACCAAATGGAGAGTCGACTCCTTCTGGATGTTGTAGTCC 543507 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||| || ||| || || || || || ||| ||||||||||||| ||||| || Sbjct 543508 GAAAGAGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCAGGG 543567 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || || || || ||||| ||||| || | | |||| |||||||| | || Sbjct 543568 GGGATTCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGGATGGCTCC 543627 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| ||| | ||||| || |||||||| || || || |||||||| Sbjct 543628 ACCTCCAGGGTGATGGTTTTTCCAGTCAGAGTCTTCACGAAGATCTGCAT 543677 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || || || | || || ||||| | || || || || || |||||||| || Sbjct 543676 ATACCACCGCGGAGACGCAGCACCAAATGGAGAGTCGACTCCTTCTGGATGTTGTAGTCC 543735 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||| || ||| || || || || || ||| ||||||||||||| ||||| || Sbjct 543736 GAAAGAGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCAGGG 543795 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || || || || ||||| ||||| || | | |||| |||||||| | || Sbjct 543796 GGGATTCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGGATGGCTCC 543855 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| ||| | ||||| ||||||| ||||| ||||| || ||||| Sbjct 543856 ACCTCCAGGGTGATGGTTTTTCCGGTCAAGGTTTTCACAAAGATTTGCAT 543905 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || || || | | || ||||| | || || || || || |||||||| || Sbjct 542992 ATACCACCGCGGAGACGAAGCACCAAATGCAGAGTCGACTCCTTCTGGATGTTGTAGTCC 543051 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||| || ||| || || || || || ||| ||||||||||||| ||||| || Sbjct 543052 GAAAGAGTGCGGCCATCCTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCTGGG 543111 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || || || || ||||| ||||| || | | |||| |||||||| | || Sbjct 543112 GGGATTCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGGATGGCTCC 543171 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| ||| | ||||| ||||||| ||||| ||||| || ||||| Sbjct 543172 ACCTCCAGGGTGATGGTTTTTCCGGTCAAGGTTTTCACAAAGATTTGCAT 543221 >seq3 Length=12541198 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 114156 CCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTC 114215 |||||||| || | ||| || || || | || || || || || |||||||||||| | Sbjct 3175935 CCGCCACGAAGACGCAATACCAAGTGCAAAGTGGACTCCTTCTGGATGTTGTAATCGGAC 3175876 Query 114216 ATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGA 114275 | |||||| || || || || || || ||| |||| | |||||| || || || ||| Sbjct 3175875 AAAGTACGTCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGGGA 3175816 Query 114276 ATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACG 114335 ||||| || ||||| ||||| || | | || | |||||| | || ||||| Sbjct 3175815 ATGCCCTCCTTGTCCTGGATCTTAGCCTTGACATTCTCGATGGTGTCCGAGGGCTCGACC 3175756 Query 114336 TCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383 || | ||| | || ||||| |||||||| || ||||| ||||||||| Sbjct 3175755 TCGAGGGTGATGGTCTTGCCAGTCAGAGTCTTGACAAAGATCTGCATG 3175708 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 114174 ACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCA 114233 || ||||| | || || || || || |||||||||||| || |||||| || || Sbjct 3174549 ACCAAATGCAAGGTGGACTCCTTCTGGATGTTGTAATCGGACAAAGTACGTCCGTCCTCC 3174490 Query 114234 AGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCA 114293 || || || || ||| |||| | |||||| || || || |||||||| || ||||| Sbjct 3174489 AGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGGGAATGCCCTCCTTGTCCTGG 3174430 Query 114294 ATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTG 114353 ||||| || | | || | |||||| | || ||||| || | ||| | || ||| Sbjct 3174429 ATCTTAGCCTTGACATTCTCGATGGTGTCCGAGGGCTCGACCTCGAGGGTGATGGTCTTG 3174370 Query 114354 CCGGTCAGAGTTTTTACAAAAATCTGCATG 114383 || |||||||| || ||||| ||||||||| Sbjct 3174369 CCAGTCAGAGTCTTGACAAAGATCTGCATG 3174340 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 114174 ACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCA 114233 || ||||| | || || || || || |||||||||||| || |||||| || || Sbjct 3174777 ACCAAATGCAAGGTGGACTCCTTCTGGATGTTGTAATCGGACAAAGTACGTCCGTCCTCC 3174718 Query 114234 AGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCA 114293 || || || || ||| |||| | |||||| || || || |||||||| || ||||| Sbjct 3174717 AGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGGGAATGCCCTCCTTGTCCTGG 3174658 Query 114294 ATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTG 114353 ||||| || | | || | |||||| | || ||||| || | ||| | || ||| Sbjct 3174657 ATCTTAGCCTTGACATTCTCGATGGTGTCCGAGGGCTCGACCTCGAGGGTGATGGTCTTG 3174598 Query 114354 CCGGTCAGAGTTTTTACAAAAATCTGCATG 114383 || |||||||| || ||||| ||||||||| Sbjct 3174597 CCAGTCAGAGTCTTGACAAAGATCTGCATG 3174568 Score = 100 bits (110), Expect = 2e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 114174 ACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCA 114233 || ||||| | || || || || || |||||||||||| || |||||| || || Sbjct 3175461 ACCAAATGCAAGGTGGACTCCTTCTGGATGTTGTAATCGGACAAAGTACGTCCGTCCTCC 3175402 Query 114234 AGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCA 114293 || || || || ||| |||| | |||||| || || || |||||||| || ||||| Sbjct 3175401 AGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGGGAATGCCCTCCTTGTCCTGG 3175342 Query 114294 ATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTG 114353 ||||| || | | || | |||||| | || ||||| || | ||| | || ||| Sbjct 3175341 ATCTTAGCCTTGACATTCTCGATGGTGTCCGAGGGCTCGACCTCGAGGGTGATGGTCTTG 3175282 Query 114354 CCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 114386 || |||||||| || || || ||||||||| || Sbjct 3175281 CCAGTCAGAGTCTTCACGAAGATCTGCATGCCT 3175249 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 114174 ACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCA 114233 || ||||| | || || || || || |||||||||||| || ||||| || || Sbjct 3174093 ACCAAATGCAAGGTGGACTCCTTCTGGATGTTGTAATCGGACAAGGTACGTCCGTCCTCC 3174034 Query 114234 AGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCA 114293 || || || || ||| |||| | |||||| || || || |||||||| || ||||| Sbjct 3174033 AGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGGGAATGCCCTCCTTGTCCTGG 3173974 Query 114294 ATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTG 114353 ||||| || | | || | |||||| | || || || || | ||| | || ||| Sbjct 3173973 ATCTTGGCCTTGACATTCTCGATGGTGTCCGAGGGCTCAACCTCGAGGGTGATGGTCTTG 3173914 Query 114354 CCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || ||||| || || || || |||||||| Sbjct 3173913 CCAGTCAGGGTCTTCACGAAGATCTGCAT 3173885 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420109873341480