Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20pseudoobscura_20pseudoobscura_20[refseq_20GCF_5F0000017
65.3_202013-04-11] 4,790 sequences; 152,696,384 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq10 138 1e-27
seq7 132 5e-26
seq3 111 2e-19
seq6 107 2e-18
seq4631 95.1 1e-14
seq12 86.0 6e-12
>seq10
Length=19787792
Score = 138 bits (152), Expect = 1e-27
Identities = 501/772 (65%), Gaps = 29/772 (4%)
Strand=Plus/Minus
Query 52093 ACGAGCGCTATTTTATCAAGCACGTGTTGGCGTTCTTCGCCGCCGCCGATAGCATCGTGA 52152
|||||||||| |||||| || ||| |||| |||||||| ||| | || |||| || |
Sbjct 12208490 ACGAGCGCTACTTTATCTCCCATGTGCTGGCCTTCTTCGCTGCCTCGGACGGCATTGTTA 12208431
Query 52153 ACATTAACCTCATCGAGTACATGCAGCGGAACGTTCCGGAACTC-GAGGCGCAATACTTT 52211
|| || || ||||| | | | | | || | | | | | ||||| | | |||
Sbjct 12208430 ACGAGAATCTGGTCGAGCGCTTTAGTCAGGAGGTGCAG-ATCACAGAGGCACGTTGCTTC 12208372
Query 52212 TATAATTTGCAAGTGCTCATCGAGTGCGTGCACACGGAGATGTACAATCTGCTCATTGAG 52271
|| || || | ||| ||| |||||| | |||||||||| ||||||||||
Sbjct 12208371 TACGGCTTCCAGATAGCCATGGAGAATGTGCACTCCGAGATGTACAGCGTGCTCATTGA- 12208313
Query 52272 CAGCTG-ATAAAAGATGAGCACGAGCGCGACACGCTGCTGAATGCGTTCGAGCACGTGCC 52330
|| || ||| || ||| ||||||||| || | ||||| | ||| | ||||
Sbjct 12208312 CACCTACATACGGGAGCCGCAGGAGCGCGACTACTTGTTCAATGCTATTGAGACCATGCC 12208253
Query 52331 GTGCGTT---CGCAAAAAGGCTCAGTGGGCAATGAAGTGGAT-----CGAGAGCGACACC 52382
| || ||||| ||| | ||||| ||| ||||| ||| | ||
Sbjct 12208252 GGCTGTAAAGCGCAA---GGCGGACTGGGCCATGTCCTGGATATCCTCGAAATCG----- 12208201
Query 52383 GCCACGCTGGCCGAGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGC 52442
|||| | |||||||| || | ||||| || || || || | || ||| |||
Sbjct 12208200 GCCAACTTTGCCGAGCGTATTATTGCCTTTGCGGCCGTGGAAGGAATCTTCTTTAGTGGC 12208141
Query 52443 AGCTTTGCCGCCATCTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGC 52502
||||||||| | ||||||| | || | | || | |||||||| ||||| ||| |
Sbjct 12208140 AGCTTTGCCTCGATCTTTTGGCTGAAGAAGCGTGGTCTCATGCCCGGTCTGACCTTCTCC 12208081
Query 52503 AACGAGTTGATATCGCGCGACGAAGGACTGCACACGGACTTTGCGTGCCTCTACTACAAG 52562
|||||| |||| || || |||||||| || ||| ||||||||| ||| || |
Sbjct 12208080 AACGAGCTGATCTCCCGTGACGAAGGTCTTCACTGCGACTTTGCGGTGCTCATGTATCAC 12208021
Query 52563 ACGCGCGTGA--CCGAAAAATTGGATTCGGACACGATCCTGAGCATGTTCAAGGAGGCGG 52620
| ||| | | || || || || ||| || ||| || ||| || |
Sbjct 12208020 CATCTAGTGCAGCGGCCCAAGCGGGAGCG--CATCATCGAGATCAT---CAGGGATGCTG 12207966
Query 52621 TGGCTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAACG 52680
||| ||||| ||||||| | || | || ||||| ||| | || | |||||||||
Sbjct 12207965 TGGAAATCGAGCAGGAGTTCCTCACTGAAGCCCTGCCCGTCAATTTGATTGGCATGAACT 12207906
Query 52681 CGCAGTC-CATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGG 52739
| || ||||| | ||||||||||||| ||||| ||||| ||| | | | |||||||
Sbjct 12207905 -GTGTTCTCATGTCCCAGTACATCGAGTTCGTGGCCGATCGGCTGCTAGGGGAGCTCGGT 12207847
Query 52740 CAGCCAAAGTACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTTGAG 52799
| ||| || |||| || ||||| || | || ||| | | || ||||| ||
Sbjct 12207846 GTGGGTAAGATCTACAACACTAAGAATCCTTTCAATTTCATGGAGATGATCTCGCTGGAC 12207787
Query 52800 GGCAAGACCAACTTTTTCGAGAAGCGAGTCGGCGAGTATAAGCGTTTCGGTG 52851
|| ||||| ||||| || |||||| || | |||||| |||| | ||||
Sbjct 12207786 GGAAAGACAAACTTCTTTGAGAAGAAGGTGGCCGAGTACCAGCGCATGGGTG 12207735
>seq7
Length=13333775
Score = 132 bits (146), Expect = 5e-26
Identities = 237/341 (70%), Gaps = 9/341 (3%)
Strand=Plus/Minus
Query 57110 CAATGCCGATGATGCCGCAGCCGAGACGGCCGCCCGAGTTGCCGGTGGTCTTGCTCAGCG 57169
||||||| |||| |||||||| | |||| |||| | ||||||||||||||||| |||
Sbjct 10666532 CAATGCCAATGACACCGCAGCCAATACGGGCGCCGGCATTGCCGGTGGTCTTGCTTAGCT 10666473
Query 57170 GATGTTCGGTGAGGCCGAGATCGTCGCGCTTCG-CGTGAACCACCAGACTGCGGCCGACG 57228
|| | ||| | || || || ||| ||||||| |||| |||| || | |
Sbjct 10666472 CGTGACCACCCTTGCCCAAGTCATCA-GCGTCGGCGTGAACGACCACGGTGCGTCCTATG 10666414
Query 57229 ACGCTATTTTCGCCGAAAAGCGTCATCACGTTGTCGATCTTGTCCACTTCGGTGAGGGCG 57288
| ||||| | ||||| ||||| ||| |||| | || || | ||| || |
Sbjct 10666413 ATGCTATCGGCACCGAACAGCGTGATCTTCGAGTCGGTGATGCTGACGGCCGTGGGGCTG 10666354
Query 57289 TTGGACACTTTGGCCTCGACGTTGCCCAAGTCGCCGACGTGCCGCACGGCCGCGTTGGGA 57348
| || |||| || ||||||||||||||| | ||| || | || ||||
Sbjct 10666353 TCACCGGCT---GCCTGGATGTTGCCCAAGTCGCCCAAGTGGCGGTTCTCGTCGGTGGGG 10666297
Query 57349 GCGCCGTGTTCGCTG--CCGGTGGGGTTAAAGTGCTCGCCCGCCGACGTGCAGCCGTTGC 57406
|| ||||| || || |||| ||||||||||| ||| | |||| |||||||||||
Sbjct 10666296 GCACCGTGCTCCTTGTTCCGG--GGGTTAAAGTGGGGGCCGGACGACATGCAGCCGTTGG 10666239
Query 57407 TGGTGTCGCCGAACTCGTGAACGTGAAATCCGTGCAGGCCC 57447
|| |||| ||||||||||| || || ||||||||||| |||
Sbjct 10666238 TGTTGTCCCCGAACTCGTGCACATGGAATCCGTGCAGTCCC 10666198
>seq3
Length=12541198
Score = 111 bits (122), Expect = 2e-19
Identities = 162/229 (71%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446
||| || |||| || | || ||||| | | | |||||||| || ||||||||||||
Sbjct 3174340 GCCACCGCGCAGGCGGAGCACCAAATGCAAGGTGGACTCCTTCTGGATGTTGTAGTCGGA 3174281
Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506
|| |||||| |||||| || || || |||| |||| | |||||| || || || ||
Sbjct 3174280 CAAAGTACGTCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGGG 3174221
Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566
|| || || ||||| ||| || || | | || | |||||| | | ||| ||
Sbjct 3174220 AATGCCCTCCTTGTCCTGGATCTTAGCCTTGACATTCTCGATGGTGTCCGAGGGCTCGAC 3174161
Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615
||||| || | || || ||||||||||| || ||||| |||||||||
Sbjct 3174160 CTCGAGGGTGATAGTCTTGCCAGTCAGAGTCTTGACAAAGATCTGCATG 3174112
Score = 111 bits (122), Expect = 2e-19
Identities = 162/229 (71%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446
||| || |||| || | || ||||| | | | |||||||| || ||||||||||||
Sbjct 3175024 GCCACCGCGCAGGCGGAGCACCAAATGCAAGGTGGACTCCTTCTGGATGTTGTAGTCGGA 3174965
Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506
|| |||||| |||||| || || || |||| |||| | |||||| || || || ||
Sbjct 3174964 CAAAGTACGTCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGGG 3174905
Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566
|| || || ||||| ||| || || | | || | |||||| | | ||| ||
Sbjct 3174904 AATGCCCTCCTTGTCCTGGATCTTAGCCTTGACATTCTCGATGGTGTCCGAGGGCTCGAC 3174845
Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615
||||| || | || || ||||||||||| || ||||| |||||||||
Sbjct 3174844 CTCGAGGGTGATGGTCTTGCCAGTCAGAGTCTTGACAAAGATCTGCATG 3174796
Score = 111 bits (122), Expect = 2e-19
Identities = 162/229 (71%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446
||| || |||| || | || ||||| | | | |||||||| || ||||||||||||
Sbjct 3175708 GCCACCGCGCAGGCGGAGCACCAAATGCAAGGTGGACTCCTTCTGGATGTTGTAGTCGGA 3175649
Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506
|| |||||| |||||| || || || |||| |||| | |||||| || || || ||
Sbjct 3175648 CAAAGTACGTCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGGG 3175589
Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566
|| || || ||||| ||| || || | | || | |||||| | | ||| ||
Sbjct 3175588 AATGCCCTCCTTGTCCTGGATCTTAGCCTTGACATTCTCGATGGTGTCCGAGGGCTCGAC 3175529
Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615
||||| || | || || ||||||||||| || ||||| |||||||||
Sbjct 3175528 CTCGAGGGTGATGGTCTTGCCAGTCAGAGTCTTGACAAAGATCTGCATG 3175480
Score = 111 bits (122), Expect = 2e-19
Identities = 162/229 (71%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446
|||||| || | |||||| || || || | | |||||||| || |||||||| |||
Sbjct 3175936 GCCGCCACGAAGACGCAATACCAAGTGCAAAGTGGACTCCTTCTGGATGTTGTAATCGGA 3175877
Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506
|| |||||| |||||| || || || |||| |||| | |||||| || || || ||
Sbjct 3175876 CAAAGTACGTCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGGG 3175817
Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566
|| || || ||||| ||| || || | | || | |||||| | | ||| ||
Sbjct 3175816 AATGCCCTCCTTGTCCTGGATCTTAGCCTTGACATTCTCGATGGTGTCCGAGGGCTCGAC 3175757
Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615
||||| || | || || ||||||||||| || ||||| |||||||||
Sbjct 3175756 CTCGAGGGTGATGGTCTTGCCAGTCAGAGTCTTGACAAAGATCTGCATG 3175708
Score = 107 bits (118), Expect = 2e-18
Identities = 161/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446
||| || |||| || | || ||||| | | | |||||||| || |||||||| |||
Sbjct 3174568 GCCACCGCGCAGGCGGAGCACCAAATGCAAGGTGGACTCCTTCTGGATGTTGTAATCGGA 3174509
Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506
|| |||||| |||||| || || || |||| |||| | |||||| || || || ||
Sbjct 3174508 CAAAGTACGTCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGGG 3174449
Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566
|| || || ||||| ||| || || | | || | |||||| | | ||| ||
Sbjct 3174448 AATGCCCTCCTTGTCCTGGATCTTAGCCTTGACATTCTCGATGGTGTCCGAGGGCTCGAC 3174389
Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615
||||| || | || || ||||||||||| || ||||| |||||||||
Sbjct 3174388 CTCGAGGGTGATGGTCTTGCCAGTCAGAGTCTTGACAAAGATCTGCATG 3174340
Score = 107 bits (118), Expect = 2e-18
Identities = 161/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446
||| || |||| || | || ||||| | | | |||||||| || |||||||| |||
Sbjct 3174796 GCCACCGCGCAGGCGGAGCACCAAATGCAAGGTGGACTCCTTCTGGATGTTGTAATCGGA 3174737
Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506
|| |||||| |||||| || || || |||| |||| | |||||| || || || ||
Sbjct 3174736 CAAAGTACGTCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGGG 3174677
Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566
|| || || ||||| ||| || || | | || | |||||| | | ||| ||
Sbjct 3174676 AATGCCCTCCTTGTCCTGGATCTTAGCCTTGACATTCTCGATGGTGTCCGAGGGCTCGAC 3174617
Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615
||||| || | || || ||||||||||| || ||||| |||||||||
Sbjct 3174616 CTCGAGGGTGATGGTCTTGCCAGTCAGAGTCTTGACAAAGATCTGCATG 3174568
Score = 107 bits (118), Expect = 2e-18
Identities = 161/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446
||| || |||| || | || || || | | | |||||||| || ||||||||||||
Sbjct 3175252 GCCTCCGCGCAGGCGGAGCACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGA 3175193
Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506
|| |||||| |||||| || || || |||| |||| | |||||| || || || ||
Sbjct 3175192 CAAAGTACGTCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGGG 3175133
Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566
|| || || ||||| ||| || || | | || | |||||| | | ||| ||
Sbjct 3175132 AATGCCCTCCTTGTCCTGGATCTTAGCCTTGACATTCTCGATGGTGTCCGAGGGCTCGAC 3175073
Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615
||||| || | || || ||||||||||| || ||||| |||||||||
Sbjct 3175072 CTCGAGGGTGATGGTCTTGCCAGTCAGAGTCTTGACAAAGATCTGCATG 3175024
Score = 104 bits (114), Expect = 2e-17
Identities = 162/232 (70%), Gaps = 0/232 (0%)
Strand=Plus/Minus
Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446
||| || |||| || | || ||||| | | | |||||||| || |||||||| |||
Sbjct 3175480 GCCACCGCGCAGGCGGAGCACCAAATGCAAGGTGGACTCCTTCTGGATGTTGTAATCGGA 3175421
Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506
|| |||||| |||||| || || || |||| |||| | |||||| || || || ||
Sbjct 3175420 CAAAGTACGTCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGGG 3175361
Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566
|| || || ||||| ||| || || | | || | |||||| | | ||| ||
Sbjct 3175360 AATGCCCTCCTTGTCCTGGATCTTAGCCTTGACATTCTCGATGGTGTCCGAGGGCTCGAC 3175301
Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATGGCT 138618
||||| || | || || ||||||||||| || || || ||||||||| ||
Sbjct 3175300 CTCGAGGGTGATGGTCTTGCCAGTCAGAGTCTTCACGAAGATCTGCATGCCT 3175249
>seq6
Length=9197557
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| || || | ||||| || ||||| | | |||||||| || |||||||||||
Sbjct 544135 CCACCGCGGAGACGCAGCACCAAATGGAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAA 544194
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| ||| || ||||| ||||| || |||| |||| |||||||| ||||| || ||
Sbjct 544195 AGAGTGCGGCCATCCTCCAGTTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCTGGGGGG 544254
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567
|| || || ||||| ||| || || | | || | |||||||| | |||||||
Sbjct 544255 ATTCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGGATGGCTCCACC 544314
Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|| | || | ||||| ||||||| ||||| ||||| ||||||||
Sbjct 544315 TCCAGGGTGATGGTTTTTCCAGTCAAGGTTTTCACAAAGATCTGCAT 544361
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| || || | ||||| || ||||| | | |||||||| || |||||||||||
Sbjct 543451 CCACCGCGGAGACGCAGCACCAAATGGAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAA 543510
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| ||| || ||||| || || || |||| |||| |||||||| ||||| || ||
Sbjct 543511 AGAGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCAGGGGGG 543570
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567
|| || || ||||| ||| || || | | || | |||||||| | |||||||
Sbjct 543571 ATTCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGGATGGCTCCACC 543630
Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|| | || | ||||| ||||||||||| || || || ||||||||
Sbjct 543631 TCCAGGGTGATGGTTTTTCCAGTCAGAGTCTTCACGAAGATCTGCAT 543677
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| || || | ||||| || ||||| | | |||||||| || |||||||||||
Sbjct 543907 CCACCGCGGAGACGCAGCACCAAATGGAGAGTCGACTCCTTCTGGATGTTGTAGTCAGAA 543966
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| ||| || ||||| || || || |||| |||| |||||||| ||||| |||||
Sbjct 543967 AGAGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCTGGAGGG 544026
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567
|| || || ||||| ||| || |||| | || | |||||||| | |||||||
Sbjct 544027 ATTCCCTCCTTGTCCTGGATCTTGGCCTTTACGTTCTCAATGGTGTCGGATGGCTCCACC 544086
Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|| | || | ||||| || |||| ||||| ||||| || |||||
Sbjct 544087 TCCAGGGTGATGGTTTTTCCGGTCAAGGTTTTCACAAAGATTTGCAT 544133
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| || || | ||||| || ||||| | | |||||||| || |||||||||||
Sbjct 542539 CCACCGCGGAGACGCAGCACCAAATGGAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAA 542598
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| ||| || ||||| || || || |||| |||| |||||||| ||||| || ||
Sbjct 542599 AGAGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCAGGGGGG 542658
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567
|| || || ||||| ||| || || | | || | |||||||| | |||||||
Sbjct 542659 ATTCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGGATGGCTCCACC 542718
Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|| | || | ||||| || |||| ||||| ||||| || |||||
Sbjct 542719 TCCAGGGTGATGGTTTTTCCGGTCAAGGTTTTCACAAAGATTTGCAT 542765
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| || || | ||| | || ||||| | | |||||||| || |||||||||||
Sbjct 542767 CCACCGCGGAGACGAAGCACCAAATGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAA 542826
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| ||| || ||||| || || || |||| |||| |||||||| ||||| || ||
Sbjct 542827 AGAGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCTGGGGGG 542886
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567
|| || || ||||| ||| || || | | || | |||||||| | |||||||
Sbjct 542887 ATTCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGGATGGCTCCACC 542946
Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|| | || | ||||| || |||| ||||| |||||||| |||||
Sbjct 542947 TCCAGGGTGATGGTTTTTCCGGTCAAGGTTTTCACAAAAATTTGCAT 542993
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| || || | ||| | || ||||| | | |||||||| || |||||||||||
Sbjct 543223 CCACCGCGGAGACGAAGCACCAAATGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAA 543282
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| ||| || ||||| || || || |||| |||| |||||||| ||||| || ||
Sbjct 543283 AGAGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCAGGGGGG 543342
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567
|| || || ||||| ||| || || | | || | |||||||| | |||||||
Sbjct 543343 ATTCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGGATGGCTCCACC 543402
Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|| | || | ||||| || |||| ||||| |||||||| |||||
Sbjct 543403 TCCAGGGTGATGGTTTTTCCGGTCAAGGTTTTCACAAAAATTTGCAT 543449
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| || || | ||||| || ||||| | | |||||||| || |||||||||||
Sbjct 543679 CCACCGCGGAGACGCAGCACCAAATGGAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAA 543738
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| ||| || ||||| || || || |||| |||| |||||||| ||||| || ||
Sbjct 543739 AGAGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCAGGGGGG 543798
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567
|| || || ||||| ||| || || | | || | |||||||| | |||||||
Sbjct 543799 ATTCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGGATGGCTCCACC 543858
Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|| | || | ||||| || |||| ||||| ||||| || |||||
Sbjct 543859 TCCAGGGTGATGGTTTTTCCGGTCAAGGTTTTCACAAAGATTTGCAT 543905
Score = 91.5 bits (100), Expect = 1e-13
Identities = 166/240 (69%), Gaps = 5/240 (2%)
Strand=Plus/Plus
Query 138379 TAGCCGCAG---CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATG 138435
||| ||||| ||||| || | ||||| || ||||| | | |||||||| || |||
Sbjct 542299 TAGGCGCAGACTCCGCCACGGAGACGCAGCACCAAATGGAGAGTCGACTCCTTCTGGATG 542358
Query 138436 TTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGT 138495
|||||||| | ||| || || || || || || || | |||| ||||||||
Sbjct 542359 TTGTAGTCCGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCAGCGAAGATGAGACGCTGC 542418
Query 138496 TGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTG-TTTTAATTGTTCCACGGTGTC 138554
||||| || || || || || ||||| ||| | || | ||| | | || | ||||||
Sbjct 542419 TGGTCTGGGGGGATTCCCTCCTTGTC-CTGAATCTTGGCTTTCACGTTCTCAATGGTGTC 542477
Query 138555 GGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
| | || ||||| | || | ||||| ||||||||||| || || ||||| |||||
Sbjct 542478 AGAAGGTTCGACCTCCAGGGTAATAGTTTTTCCAGTCAGAGTCTTCACGAAAATTTGCAT 542537
Score = 89.7 bits (98), Expect = 5e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| || || | ||| | || ||||| | | |||||||| || |||||||||||
Sbjct 542995 CCACCGCGGAGACGAAGCACCAAATGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAA 543054
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| ||| || ||||| || || || |||| |||| |||||||| ||||| || ||
Sbjct 543055 AGAGTGCGGCCATCCTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCTGGGGGG 543114
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567
|| || || ||||| ||| || || | | || | |||||||| | |||||||
Sbjct 543115 ATTCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGGATGGCTCCACC 543174
Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|| | || | ||||| || |||| ||||| ||||| || |||||
Sbjct 543175 TCCAGGGTGATGGTTTTTCCGGTCAAGGTTTTCACAAAGATTTGCAT 543221
>seq4631
Length=7852
Score = 95.1 bits (104), Expect = 1e-14
Identities = 150/215 (70%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 138406 ACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCG 138465
|||||||| | | | |||||||| |||||||| || || || || || || ||
Sbjct 697 ACTAAATGCAAGGTAGACTCCTTCTGAATGTTATAATCAGACAGTGTTCGGCCATCTTCC 638
Query 138466 AGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTG 138525
| ||| || || | |||| | ||||||||| || ||||| || ||||||||||| |
Sbjct 637 AATTGCTTGCCAGCGAAGATCAAACGCTGTTGATCTGGAGGAATTCCTTCTTTGTCCTGG 578
Query 138526 ATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTA 138585
|| || ||| | | ||| | ||| || | || || ||||| | || | || ||
Sbjct 577 ATCTTGGCTTTGACATTTTCGATGGTATCCGACGGTTCGACCTCAAGAGTTATGGTCTTG 518
Query 138586 CCAGTCAGAGTTTTTACAAAAATCTGCATGGCTTA 138620
|| || || || |||||||| |||||||||| |||
Sbjct 517 CCCGTTAGGGTCTTTACAAAGATCTGCATGGTTTA 483
>seq12
Length=1235759
Score = 86.0 bits (94), Expect = 6e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| || |||| || | || || || | | | |||||||| || |||||||||||| |
Sbjct 219394 CCACCGCGCAGGCGGAGCACCAAGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAC 219335
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| ||| || ||||| || || || |||| |||| |||||||| || || || ||
Sbjct 219334 AGAGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGGGGA 219275
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567
|| || || ||||| ||| || || | | || | |||||| | | ||| |||
Sbjct 219274 ATGCCCTCCTTGTCCTGGATCTTAGCCTTGACATTCTCGATGGTGTCAGAGGGCTCGACC 219215
Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|| | || | || || ||||| |||||||| || || || |||||
Sbjct 219214 TCCAAGGTGATGGTCTTGCCAGTGAGAGTTTTCACGAAGATTTGCAT 219168
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496232686288800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |