Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20pseudoobscura_20pseudoobscura_20[refseq_20GCF_5F0000017 65.3_202013-04-11] 4,790 sequences; 152,696,384 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq6 147 2e-30 seq12 145 9e-30 seq3 145 9e-30 >seq6 Length=9197557 Score = 147 bits (162), Expect = 2e-30 Identities = 162/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||||| ||||| ||| | || |||||| ||||| |||||||| || |||||||| | Sbjct 542550 ACGCAGCACCAAATGGAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTGCGGCC 542609 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 || || ||||||||||||||||| || | ||||||||||| | || | | |||||| Sbjct 542610 ATCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCAGGGGGGATTCCCTCCTT 542669 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGAT 46557 |||| |||||| ||| | || | | |||||| | ||||| |||| ||||| Sbjct 542670 GTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGGATGGCTCCACCTCCAGGGTGAT 542729 Query 46558 GGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 |||||| || |||| ||||| |||||||||||||| Sbjct 542730 GGTTTTTCCGGTCAAGGTTTTCACAAAGATTTGCAT 542765 Score = 147 bits (162), Expect = 2e-30 Identities = 162/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||||| ||||| ||| | || |||||| ||||| |||||||| || |||||||| | Sbjct 543690 ACGCAGCACCAAATGGAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTGCGGCC 543749 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 || || ||||||||||||||||| || | ||||||||||| | || | | |||||| Sbjct 543750 ATCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCAGGGGGGATTCCCTCCTT 543809 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGAT 46557 |||| |||||| ||| | || | | |||||| | ||||| |||| ||||| Sbjct 543810 GTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGGATGGCTCCACCTCCAGGGTGAT 543869 Query 46558 GGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 |||||| || |||| ||||| |||||||||||||| Sbjct 543870 GGTTTTTCCGGTCAAGGTTTTCACAAAGATTTGCAT 543905 Score = 147 bits (162), Expect = 2e-30 Identities = 162/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||||| ||||| ||| | || |||||| ||||| |||||||| || |||||||| | Sbjct 543918 ACGCAGCACCAAATGGAGAGTCGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCC 543977 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 || || ||||||||||||||||| || | ||||||||||| | || | | |||||| Sbjct 543978 ATCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCTGGAGGGATTCCCTCCTT 544037 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGAT 46557 |||| |||||| ||| | || | | |||||| | ||||| |||| ||||| Sbjct 544038 GTCCTGGATCTTGGCCTTTACGTTCTCAATGGTGTCGGATGGCTCCACCTCCAGGGTGAT 544097 Query 46558 GGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 |||||| || |||| ||||| |||||||||||||| Sbjct 544098 GGTTTTTCCGGTCAAGGTTTTCACAAAGATTTGCAT 544133 Score = 145 bits (160), Expect = 9e-30 Identities = 164/220 (75%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||||| ||||| ||| | || |||||| ||||| |||||||| || |||||||| | Sbjct 544146 ACGCAGCACCAAATGGAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTGCGGCC 544205 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 || || || |||||||||||||| || | ||||||||||| | || | | |||||| Sbjct 544206 ATCCTCCAGTTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCTGGGGGGATTCCCTCCTT 544265 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGAT 46557 |||| |||||| ||| | || | | |||||| | ||||| |||| ||||| Sbjct 544266 GTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGGATGGCTCCACCTCCAGGGTGAT 544325 Query 46558 GGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTTG 46597 |||||| || |||| ||||| |||||||| ||||||||| Sbjct 544326 GGTTTTTCCAGTCAAGGTTTTCACAAAGATCTGCATTTTG 544365 Score = 141 bits (156), Expect = 1e-28 Identities = 161/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||| | ||||| ||||| || |||||| ||||| |||||||| || |||||||| | Sbjct 542778 ACGAAGCACCAAATGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTGCGGCC 542837 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 || || ||||||||||||||||| || | ||||||||||| | || | | |||||| Sbjct 542838 ATCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCTGGGGGGATTCCCTCCTT 542897 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGAT 46557 |||| |||||| ||| | || | | |||||| | ||||| |||| ||||| Sbjct 542898 GTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGGATGGCTCCACCTCCAGGGTGAT 542957 Query 46558 GGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 |||||| || |||| ||||| ||||| |||||||| Sbjct 542958 GGTTTTTCCGGTCAAGGTTTTCACAAAAATTTGCAT 542993 Score = 141 bits (156), Expect = 1e-28 Identities = 161/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||| | ||||| ||||| || |||||| ||||| |||||||| || |||||||| | Sbjct 543006 ACGAAGCACCAAATGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTGCGGCC 543065 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 || || |||||||| |||||||| || | ||||||||||| | || | | |||||| Sbjct 543066 ATCCTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCTGGGGGGATTCCCTCCTT 543125 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGAT 46557 |||| |||||| ||| | || | | |||||| | ||||| |||| ||||| Sbjct 543126 GTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGGATGGCTCCACCTCCAGGGTGAT 543185 Query 46558 GGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 |||||| || |||| ||||| |||||||||||||| Sbjct 543186 GGTTTTTCCGGTCAAGGTTTTCACAAAGATTTGCAT 543221 Score = 141 bits (156), Expect = 1e-28 Identities = 161/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||| | ||||| ||||| || |||||| ||||| |||||||| || |||||||| | Sbjct 543234 ACGAAGCACCAAATGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTGCGGCC 543293 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 || || ||||||||||||||||| || | ||||||||||| | || | | |||||| Sbjct 543294 ATCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCAGGGGGGATTCCCTCCTT 543353 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGAT 46557 |||| |||||| ||| | || | | |||||| | ||||| |||| ||||| Sbjct 543354 GTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGGATGGCTCCACCTCCAGGGTGAT 543413 Query 46558 GGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 |||||| || |||| ||||| ||||| |||||||| Sbjct 543414 GGTTTTTCCGGTCAAGGTTTTCACAAAAATTTGCAT 543449 Score = 138 bits (152), Expect = 1e-27 Identities = 160/216 (74%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||||| ||||| ||| | || |||||| ||||| |||||||| || |||||||| | Sbjct 543462 ACGCAGCACCAAATGGAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTGCGGCC 543521 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 || || ||||||||||||||||| || | ||||||||||| | || | | |||||| Sbjct 543522 ATCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCAGGGGGGATTCCCTCCTT 543581 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGAT 46557 |||| |||||| ||| | || | | |||||| | ||||| |||| ||||| Sbjct 543582 GTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGGATGGCTCCACCTCCAGGGTGAT 543641 Query 46558 GGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 |||||| || ||||| || || || ||||| ||||| Sbjct 543642 GGTTTTTCCAGTCAGAGTCTTCACGAAGATCTGCAT 543677 Score = 111 bits (122), Expect = 2e-19 Identities = 154/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||||| ||||| ||| | || |||||| ||||| |||||||| || |||||||| | Sbjct 542322 ACGCAGCACCAAATGGAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTGCGGCC 542381 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 || || ||||||||||| ||||| || | ||||||||||| | || | | |||||| Sbjct 542382 ATCTTCCAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCTGGGGGGATTCCCTCCTT 542441 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGAT 46557 |||| ||||| || | || | | ||||| | ||| || |||| || || Sbjct 542442 GTCCTGAATCTTGGCTTTCACGTTCTCAATGGTGTCAGAAGGTTCGACCTCCAGGGTAAT 542501 Query 46558 GGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||||| || ||||| || || || || |||||||| Sbjct 542502 AGTTTTTCCAGTCAGAGTCTTCACGAAAATTTGCAT 542537 >seq12 Length=1235759 Score = 145 bits (160), Expect = 9e-30 Identities = 160/213 (75%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 ||||| |||| || |||||| ||||| ||||||||||| |||||||| | || || Sbjct 219377 CACCAAGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGGCCATCCTC 219318 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 ||||||||||||||||| |||| |||||||| || | || | || |||||||||| Sbjct 219317 CAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGGGGAATGCCCTCCTTGTCCTG 219258 Query 46504 GATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563 |||||| ||||| || | | ||||| | || || |||| |||||||| || Sbjct 219257 GATCTTAGCCTTGACATTCTCGATGGTGTCAGAGGGCTCGACCTCCAAGGTGATGGTCTT 219198 Query 46564 GCCCGTCAGCGTTTTAACAAAGATTTGCATTTT 46596 ||| || || ||||| || |||||||||||||| Sbjct 219197 GCCAGTGAGAGTTTTCACGAAGATTTGCATTTT 219165 >seq3 Length=12541198 Score = 145 bits (160), Expect = 9e-30 Identities = 158/210 (75%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 ||||| |||||| || |||||| ||||| ||||||||||| | ||| || |||| || Sbjct 3175006 CACCAAATGCAAGGTGGACTCCTTCTGGATGTTGTAGTCGGACAAAGTACGTCCGTCCTC 3174947 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 ||||||||||||||||| ||||| |||||||| || | || | || |||||||||| Sbjct 3174946 CAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGGGAATGCCCTCCTTGTCCTG 3174887 Query 46504 GATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563 |||||| ||||| || | | ||||| | || || || | |||||||| || Sbjct 3174886 GATCTTAGCCTTGACATTCTCGATGGTGTCCGAGGGCTCGACCTCGAGGGTGATGGTCTT 3174827 Query 46564 GCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||| ||||| || || |||||||| ||||| Sbjct 3174826 GCCAGTCAGAGTCTTGACAAAGATCTGCAT 3174797 Score = 145 bits (160), Expect = 9e-30 Identities = 158/210 (75%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 ||||| |||||| || |||||| ||||| ||||||||||| | ||| || |||| || Sbjct 3175690 CACCAAATGCAAGGTGGACTCCTTCTGGATGTTGTAGTCGGACAAAGTACGTCCGTCCTC 3175631 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 ||||||||||||||||| ||||| |||||||| || | || | || |||||||||| Sbjct 3175630 CAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGGGAATGCCCTCCTTGTCCTG 3175571 Query 46504 GATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563 |||||| ||||| || | | ||||| | || || || | |||||||| || Sbjct 3175570 GATCTTAGCCTTGACATTCTCGATGGTGTCCGAGGGCTCGACCTCGAGGGTGATGGTCTT 3175511 Query 46564 GCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||| ||||| || || |||||||| ||||| Sbjct 3175510 GCCAGTCAGAGTCTTGACAAAGATCTGCAT 3175481 Score = 141 bits (156), Expect = 1e-28 Identities = 161/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 |||||| |||| ||||| || |||||| ||||| ||||| ||||| | ||| || | Sbjct 3175924 ACGCAATACCAAGTGCAAAGTGGACTCCTTCTGGATGTTGTAATCGGACAAAGTACGTCC 3175865 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 ||| || ||||||||||||||||| ||||| |||||||| || | || | || |||||| Sbjct 3175864 GTCCTCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGGGAATGCCCTCCTT 3175805 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGAT 46557 |||| |||||| ||||| || | | ||||| | || || || | ||||| Sbjct 3175804 GTCCTGGATCTTAGCCTTGACATTCTCGATGGTGTCCGAGGGCTCGACCTCGAGGGTGAT 3175745 Query 46558 GGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||| ||||| ||||| || || |||||||| ||||| Sbjct 3175744 GGTCTTGCCAGTCAGAGTCTTGACAAAGATCTGCAT 3175709 Score = 140 bits (154), Expect = 4e-28 Identities = 157/210 (75%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 ||||| |||||| || |||||| ||||| ||||||||||| | ||| || |||| || Sbjct 3174322 CACCAAATGCAAGGTGGACTCCTTCTGGATGTTGTAGTCGGACAAAGTACGTCCGTCCTC 3174263 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 ||||||||||||||||| ||||| |||||||| || | || | || |||||||||| Sbjct 3174262 CAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGGGAATGCCCTCCTTGTCCTG 3174203 Query 46504 GATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563 |||||| ||||| || | | ||||| | || || || | ||||| || || Sbjct 3174202 GATCTTAGCCTTGACATTCTCGATGGTGTCCGAGGGCTCGACCTCGAGGGTGATAGTCTT 3174143 Query 46564 GCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||| ||||| || || |||||||| ||||| Sbjct 3174142 GCCAGTCAGAGTCTTGACAAAGATCTGCAT 3174113 Score = 140 bits (154), Expect = 4e-28 Identities = 157/210 (75%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 ||||| |||||| || |||||| ||||| ||||| ||||| | ||| || |||| || Sbjct 3174550 CACCAAATGCAAGGTGGACTCCTTCTGGATGTTGTAATCGGACAAAGTACGTCCGTCCTC 3174491 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 ||||||||||||||||| ||||| |||||||| || | || | || |||||||||| Sbjct 3174490 CAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGGGAATGCCCTCCTTGTCCTG 3174431 Query 46504 GATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563 |||||| ||||| || | | ||||| | || || || | |||||||| || Sbjct 3174430 GATCTTAGCCTTGACATTCTCGATGGTGTCCGAGGGCTCGACCTCGAGGGTGATGGTCTT 3174371 Query 46564 GCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||| ||||| || || |||||||| ||||| Sbjct 3174370 GCCAGTCAGAGTCTTGACAAAGATCTGCAT 3174341 Score = 140 bits (154), Expect = 4e-28 Identities = 157/210 (75%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 ||||| |||||| || |||||| ||||| ||||| ||||| | ||| || |||| || Sbjct 3174778 CACCAAATGCAAGGTGGACTCCTTCTGGATGTTGTAATCGGACAAAGTACGTCCGTCCTC 3174719 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 ||||||||||||||||| ||||| |||||||| || | || | || |||||||||| Sbjct 3174718 CAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGGGAATGCCCTCCTTGTCCTG 3174659 Query 46504 GATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563 |||||| ||||| || | | ||||| | || || || | |||||||| || Sbjct 3174658 GATCTTAGCCTTGACATTCTCGATGGTGTCCGAGGGCTCGACCTCGAGGGTGATGGTCTT 3174599 Query 46564 GCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||| ||||| || || |||||||| ||||| Sbjct 3174598 GCCAGTCAGAGTCTTGACAAAGATCTGCAT 3174569 Score = 138 bits (152), Expect = 1e-27 Identities = 159/214 (74%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 ||||| |||||| || |||||| ||||| ||||| ||||| | || || |||| || Sbjct 3174094 CACCAAATGCAAGGTGGACTCCTTCTGGATGTTGTAATCGGACAAGGTACGTCCGTCCTC 3174035 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 ||||||||||||||||| ||||| |||||||| || | || | || |||||||||| Sbjct 3174034 CAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGGGAATGCCCTCCTTGTCCTG 3173975 Query 46504 GATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563 |||||| ||||| || | | ||||| | || || || | |||||||| || Sbjct 3173974 GATCTTGGCCTTGACATTCTCGATGGTGTCCGAGGGCTCAACCTCGAGGGTGATGGTCTT 3173915 Query 46564 GCCCGTCAGCGTTTTAACAAAGATTTGCATTTTG 46597 ||| ||||| || || || ||||| ||||||||| Sbjct 3173914 GCCAGTCAGGGTCTTCACGAAGATCTGCATTTTG 3173881 Score = 136 bits (150), Expect = 4e-27 Identities = 156/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 ||||| |||||| || |||||| ||||| ||||| ||||| | ||| || |||| || Sbjct 3175462 CACCAAATGCAAGGTGGACTCCTTCTGGATGTTGTAATCGGACAAAGTACGTCCGTCCTC 3175403 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 ||||||||||||||||| ||||| |||||||| || | || | || |||||||||| Sbjct 3175402 CAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGGGAATGCCCTCCTTGTCCTG 3175343 Query 46504 GATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563 |||||| ||||| || | | ||||| | || || || | |||||||| || Sbjct 3175342 GATCTTAGCCTTGACATTCTCGATGGTGTCCGAGGGCTCGACCTCGAGGGTGATGGTCTT 3175283 Query 46564 GCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||| ||||| || || || ||||| ||||| Sbjct 3175282 GCCAGTCAGAGTCTTCACGAAGATCTGCAT 3175253 Score = 134 bits (148), Expect = 2e-26 Identities = 145/192 (76%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||||||||| | ||| || |||| || ||||||||||||||||| Sbjct 3175216 CTCCTTCTGGATGTTGTAGTCGGACAAAGTACGTCCGTCCTCCAGCTGCTTGCCGGCGAA 3175157 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 ||||| |||||||| || | || | || |||||||||| |||||| ||||| | Sbjct 3175156 GATCAAACGCTGCTGATCTGGGGGAATGCCCTCCTTGTCCTGGATCTTAGCCTTGACATT 3175097 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | | ||||| | || || || | |||||||| ||||| ||||| || || || Sbjct 3175096 CTCGATGGTGTCCGAGGGCTCGACCTCGAGGGTGATGGTCTTGCCAGTCAGAGTCTTGAC 3175037 Query 46582 AAAGATTTGCAT 46593 |||||| ||||| Sbjct 3175036 AAAGATCTGCAT 3175025 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565204556350800