Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20pseudoobscura_20pseudoobscura_20[refseq_20GCF_5F0000017
65.3_202013-04-11] 4,790 sequences; 152,696,384 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq10 360 2e-94
seq12 159 3e-34
seq6 150 2e-31
seq3 132 5e-26
seq7 116 4e-21
>seq10
Length=19787792
Score = 360 bits (398), Expect = 2e-94
Identities = 579/825 (70%), Gaps = 8/825 (1%)
Strand=Plus/Plus
Query 132607 TGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGCGTC 132666
|| || ||| ||||||| |||||||| || || || ||||| |||| || || | | |
Sbjct 12207746 TGGTACTCGGCCACCTTCTTCTCAAAGAAGTTTGTCTTTCCGTCCAGCGAGATCATCTCC 12207805
Query 132667 ATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTTGGTGCCGATCAGGTCGACGAGCAGC 132726
|| |||| || || || ||||||||| ||| | || || | ||||||
Sbjct 12207806 ATGAAATTGAAAGGATTCTTAGTGTTGTAGATCTTACCCACACCGAGCTCCCCTAGCAGC 12207865
Query 132727 CTGTCGGCCACGAACTCGATGTATTGCGACATGGTTTCGCAATTAAGTCCCAGCAGACGC 132786
| |||||||||||||||||||| || |||||| | || || | || | || |
Sbjct 12207866 CGATCGGCCACGAACTCGATGTACTGGGACATGAGAACACAGTTCATGCCAATCAAATTG 12207925
Query 132787 ACCGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGATTTCC 132846
|| ||||| ||||| ||||| || |||||||| | || || || ||| ||| ||
Sbjct 12207926 ACGGGCAGGGCTTCAGTGAGGAACTCCTGCTCGATTTCCACAGCATCCCTGATGATCTCG 12207985
Query 132847 CTAACGCGCGCCGCGCTCGG-CCGTTGCACCAAATGCTTGAACATCAAGCAA-GCAAAGT 132904
| | |||| || |||| || ||| ||||| | ||| | |||| | ||| |||||||
Sbjct 12207986 ATGATGCGCTCC-CGCTTGGGCCGCTGCACTAGATGGTGATACATGA-GCACCGCAAAGT 12208043
Query 132905 CGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGA 132964
|||| || | || ||||| | ||| || || |||||| ||| |||| ||||||||||
Sbjct 12208044 CGCAGTGAAGACCTTCGTCACGGGAGATCAGCTCGTTGGAGAAGGTCAGACCGGGCATGA 12208103
Query 132965 GGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGA 133024
| || || || || |||||||| || | ||| || ||||| |||||||| || || |
Sbjct 12208104 GACCACGCTTCTTCAGCCAAAAGATCGAGGCAAAGCTGCCACTAAAGAAGATTCCTTCCA 12208163
Query 133025 CGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCAGCGCA 133084
||||||| || || | | |||||| | || |||| ||| || |||||| ||
Sbjct 12208164 CGGCCGCAAAGGCAATAATACGCTCGGCAAAGTTGGCCGATTTCGAGGATATCCAGGACA 12208223
Query 133085 GCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGATGGCGTTCAACAAACGGA 133144
||||| || ||||| || || |||||| || || || || || ||||| | |
Sbjct 12208224 TGGCCCAGTCCGCCTTGCGCTTTACAGCCGGCATGGTCTCAATAGCATTGAACAA--GTA 12208281
Query 133145 GTTTCTCTTCCGAGGAACGC--ACGTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTG 133202
|| | || | | || | | | ||||||||| ||||| ||||| || |||||
Sbjct 12208282 GTCGCGCTCCTGCGGCTCCCGTATGTAGGTGTCAATGAGCACGCTGTACATCTCGGAGTG 12208341
Query 133203 TACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTC 133262
|| ||||||||||| || || |||||||| ||||| || ||||| | |||||| ||
Sbjct 12208342 CACATTCTCCATGGCTATCTGGAAGCCGTAGAAGCAACGTGCCTCTGTGATCTGCACCTC 12208401
Query 133263 TTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGC 133322
||| || |||||||||||||| ||||| || |||||||| ||| ||||| |||||
Sbjct 12208402 CTGACTAAAGCGCTCGACCAGATTCTCGTTAACAATGCCGTCCGAGGCAGCGAAGAAGGC 12208461
Query 133323 CAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCGCTCCCAGTCGCGCGTGTC 133382
|||||| || ||| || | |||||||||||| | | || ||||||| || |||
Sbjct 12208462 CAGCACATGGGAGATAAAGTAGCGCTCGTTGTCAGTGAGACGGGCCCAGTCCGTCGCGTC 12208521
Query 133383 CTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGC 133427
||| || || |||||||| || || ||||| || || ||||| ||
Sbjct 12208522 CTTTGATAGATCCACCTCTTCCACAGTCCAGAAGGAGGCCTCCGC 12208566
>seq12
Length=1235759
Score = 159 bits (176), Expect = 3e-34
Identities = 166/218 (76%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300
||||||||||| ||||| ||||| ||||| ||||| ||||||||| | || |||||| ||
Sbjct 219165 AAAATGCAAATCTTCGTGAAAACTCTCACTGGCAAGACCATCACCTTGGAGGTCGAGCCC 219224
Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360
| |||| | | | | | || | || |||| ||||| ||||| |||||| | ||
Sbjct 219225 TCTGACACCATCGAGAATGTCAAGGCTAAGATCCAGGACAAGGAGGGCATTCCCCCAGAT 219284
Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420
|| ||||| || || | ||| ||||| |||||||| || | ||||| || |||||||
Sbjct 219285 CAGCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGCACTCTGTCCGACTAC 219344
Query 38421 AACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458
|||||||| ||||| |||| ||||| |||||||| ||
Sbjct 219345 AACATCCAGAAGGAGTCGACCCTGCACTTGGTGCTCCG 219382
>seq6
Length=9197557
Score = 150 bits (166), Expect = 2e-31
Identities = 165/217 (76%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| || || ||||| | || || |||||||||||| | || || ||| | ||
Sbjct 542765 ATGCAAATCTTTGTGAAAACCTTGACCGGAAAAACCATCACCCTGGAGGTGGAGCCATCC 542706
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | | |||| | || | || |||| ||||| |||||||| ||| | |||||
Sbjct 542705 GACACCATTGAGAACG-TGAAGGCCAAGATCCAGGACAAGGAGGGAATCCCCCCTGACCA 542647
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||||| ||||| | ||| ||||| |||||||| || | ||||| || ||||||||
Sbjct 542646 GCAGCGTCTCATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGCACTCTTTCGGACTACAA 542587
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
|||||| ||||| |||| || |||||||||||||||
Sbjct 542586 CATCCAGAAGGAGTCGACTCTCCATTTGGTGCTGCGT 542550
Score = 150 bits (166), Expect = 2e-31
Identities = 165/217 (76%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| || || ||||| | || || |||||||||||| | || || ||| | ||
Sbjct 542993 ATGCAAATTTTTGTGAAAACCTTGACCGGAAAAACCATCACCCTGGAGGTGGAGCCATCC 542934
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | | |||| | || | || |||| ||||| |||||||| ||| | |||||
Sbjct 542933 GACACCATTGAGAACG-TGAAGGCCAAGATCCAGGACAAGGAGGGAATCCCCCCAGACCA 542875
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||||| ||||| | ||| ||||| |||||||| || | ||||| || ||||||||
Sbjct 542874 GCAGCGTCTCATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGCACTCTTTCGGACTACAA 542815
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
|||||| ||||| |||| |||||||||||||| |||
Sbjct 542814 CATCCAGAAGGAGTCGACTCTGCATTTGGTGCTTCGT 542778
Score = 150 bits (166), Expect = 2e-31
Identities = 165/217 (76%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| || || ||||| | || || |||||||||||| | || || ||| | ||
Sbjct 543449 ATGCAAATTTTTGTGAAAACCTTGACCGGAAAAACCATCACCCTGGAGGTGGAGCCATCC 543390
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | | |||| | || | || |||| ||||| |||||||| ||| | |||||
Sbjct 543389 GACACCATTGAGAACG-TGAAGGCCAAGATCCAGGACAAGGAGGGAATCCCCCCTGACCA 543331
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||||| ||||| | ||| ||||| |||||||| || | ||||| || ||||||||
Sbjct 543330 GCAGCGTCTCATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGCACTCTTTCGGACTACAA 543271
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
|||||| ||||| |||| |||||||||||||| |||
Sbjct 543270 CATCCAGAAGGAGTCGACTCTGCATTTGGTGCTTCGT 543234
Score = 150 bits (166), Expect = 2e-31
Identities = 165/217 (76%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || || || || |||||||||||| | || || ||| | ||
Sbjct 543677 ATGCAGATCTTCGTGAAGACTCTGACTGGAAAAACCATCACCCTGGAGGTGGAGCCATCC 543618
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | | |||| | || | || |||| ||||| |||||||| ||| | |||||
Sbjct 543617 GACACCATTGAGAACG-TGAAGGCCAAGATCCAGGACAAGGAGGGAATCCCCCCTGACCA 543559
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||||| ||||| | ||| ||||| |||||||| || | ||||| || ||||||||
Sbjct 543558 GCAGCGTCTCATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGCACTCTTTCGGACTACAA 543499
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
|||||| ||||| |||| || |||||||||||||||
Sbjct 543498 CATCCAGAAGGAGTCGACTCTCCATTTGGTGCTGCGT 543462
Score = 150 bits (166), Expect = 2e-31
Identities = 165/217 (76%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| || || ||||| | || || |||||||||||| | || || ||| | ||
Sbjct 543905 ATGCAAATCTTTGTGAAAACCTTGACCGGAAAAACCATCACCCTGGAGGTGGAGCCATCC 543846
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | | |||| | || | || |||| ||||| |||||||| ||| | |||||
Sbjct 543845 GACACCATTGAGAACG-TGAAGGCCAAGATCCAGGACAAGGAGGGAATCCCCCCTGACCA 543787
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||||| ||||| | ||| ||||| |||||||| || | ||||| || ||||||||
Sbjct 543786 GCAGCGTCTCATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGCACTCTTTCGGACTACAA 543727
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
|||||| ||||| |||| || |||||||||||||||
Sbjct 543726 CATCCAGAAGGAGTCGACTCTCCATTTGGTGCTGCGT 543690
Score = 147 bits (162), Expect = 2e-30
Identities = 166/220 (75%), Gaps = 2/220 (1%)
Strand=Plus/Minus
Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300
|||||||| || || || ||||| | || || |||||||||||| | || || ||| |
Sbjct 544364 AAAATGCAGATCTTTGTGAAAACCTTGACTGGAAAAACCATCACCCTGGAGGTGGAGCCA 544305
Query 38301 ACCGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359
|||||| | | | |||| | || | || |||| ||||| |||||||| ||| | ||
Sbjct 544304 TCCGACACCATTGAGAACG-TGAAGGCCAAGATCCAGGACAAGGAGGGAATCCCCCCAGA 544246
Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419
||| ||||| ||||| | ||| ||||| || ||||| || | ||||| || |||||
Sbjct 544245 CCAGCAGCGTCTCATCTTCGCCGGCAAGCAACTGGAGGATGGCCGCACTCTTTCGGACTA 544186
Query 38420 CAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
||||||||| ||||| |||| || |||||||||||||||
Sbjct 544185 CAACATCCAGAAGGAGTCGACTCTCCATTTGGTGCTGCGT 544146
Score = 145 bits (160), Expect = 8e-30
Identities = 164/217 (76%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| || || ||||| | || || |||||||||||| | || || ||| | ||
Sbjct 543221 ATGCAAATCTTTGTGAAAACCTTGACCGGAAAAACCATCACCCTGGAGGTGGAGCCATCC 543162
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | | |||| | || | || |||| ||||| |||||||| ||| | |||||
Sbjct 543161 GACACCATTGAGAACG-TGAAGGCCAAGATCCAGGACAAGGAGGGAATCCCCCCAGACCA 543103
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||||| ||||| | ||| || || |||||||| || | ||||| || ||||||||
Sbjct 543102 GCAGCGTCTCATCTTCGCCGGAAAGCAGCTGGAGGATGGCCGCACTCTTTCGGACTACAA 543043
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
|||||| ||||| |||| |||||||||||||| |||
Sbjct 543042 CATCCAGAAGGAGTCGACTCTGCATTTGGTGCTTCGT 543006
Score = 145 bits (160), Expect = 8e-30
Identities = 164/217 (76%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| || || ||||| | || || |||||||||||| | || || ||| | ||
Sbjct 544133 ATGCAAATCTTTGTGAAAACCTTGACCGGAAAAACCATCACCCTGGAGGTGGAGCCATCC 544074
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | | |||| | || | || |||| ||||| |||||||| || | |||||
Sbjct 544073 GACACCATTGAGAACG-TAAAGGCCAAGATCCAGGACAAGGAGGGAATCCCTCCAGACCA 544015
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||||| ||||| | ||| ||||| |||||||| || | ||||| || ||||||||
Sbjct 544014 GCAGCGTCTCATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGCACTCTTTCTGACTACAA 543955
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
|||||| ||||| |||| || |||||||||||||||
Sbjct 543954 CATCCAGAAGGAGTCGACTCTCCATTTGGTGCTGCGT 543918
Score = 143 bits (158), Expect = 3e-29
Identities = 170/228 (75%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| ||||| || || || || || ||||| || ||| | || ||||| | |
Sbjct 542537 ATGCAAATTTTCGTGAAGACTCTGACTGGAAAAACTATTACCCTGGAGGTCGAACCTTCT 542478
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | | |||| | |||| || || | ||||| |||||||| ||| | |||||
Sbjct 542477 GACACCATTGAGAACG-TGAAAGCCAAGATTCAGGACAAGGAGGGAATCCCCCCAGACCA 542419
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||||| ||||| | ||| ||||| |||||||| || | ||||| || ||||||||
Sbjct 542418 GCAGCGTCTCATCTTCGCTGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCGGACTACAA 542359
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
|||||| ||||| |||| || ||||||||||||||| | | |||||
Sbjct 542358 CATCCAGAAGGAGTCGACTCTCCATTTGGTGCTGCGTCTCCGTGGCGG 542311
>seq3
Length=12541198
Score = 132 bits (146), Expect = 5e-26
Identities = 168/231 (73%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300
|||||||| || ||||| || || || || ||||| ||||||||| |||| || ||| ||
Sbjct 3173882 AAAATGCAGATCTTCGTGAAGACCCTGACTGGCAAGACCATCACCCTCGAGGTTGAGCCC 3173941
Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360
| |||| | | | | | || | || |||| ||||| ||||| |||||| | ||
Sbjct 3173942 TCGGACACCATCGAGAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCAGAT 3174001
Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420
|| ||||| | || | ||| ||||| |||||||| |||| || ||| | ||| |||
Sbjct 3174002 CAGCAGCGTTTGATCTTCGCCGGCAAGCAGCTGGAGGACGGACGTACCTTGTCCGATTAC 3174061
Query 38421 AACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471
|||||||| ||||| | || ||||||||||||| || || | || |||
Sbjct 3174062 AACATCCAGAAGGAGTCCACCTTGCATTTGGTGCTCCGCCTGCGCGGTGGC 3174112
Score = 127 bits (140), Expect = 2e-24
Identities = 165/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || || || || || || || ||||| ||||||||| |||| |||||| || |
Sbjct 3174797 ATGCAGATCTTTGTCAAGACTCTGACTGGCAAGACCATCACCCTCGAGGTCGAGCCCTCG 3174856
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | | | | | || | || |||| ||||| ||||| |||||| | || ||
Sbjct 3174857 GACACCATCGAGAATGTCAAGGCTAAGATCCAGGACAAGGAGGGCATTCCCCCAGATCAG 3174916
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||||| | || | ||| ||||| |||||||| |||| || || | ||||||||||
Sbjct 3174917 CAGCGTTTGATCTTCGCCGGCAAGCAGCTGGAGGACGGACGTACTTTGTCCGACTACAAC 3174976
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471
||||| ||||| | || ||||||||||||| || || | || |||
Sbjct 3174977 ATCCAGAAGGAGTCCACCTTGCATTTGGTGCTCCGCCTGCGCGGTGGC 3175024
Score = 127 bits (140), Expect = 2e-24
Identities = 165/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || || || || || || || ||||| ||||||||| |||| |||||| || |
Sbjct 3175025 ATGCAGATCTTTGTCAAGACTCTGACTGGCAAGACCATCACCCTCGAGGTCGAGCCCTCG 3175084
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | | | | | || | || |||| ||||| ||||| |||||| | || ||
Sbjct 3175085 GACACCATCGAGAATGTCAAGGCTAAGATCCAGGACAAGGAGGGCATTCCCCCAGATCAG 3175144
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||||| | || | ||| ||||| |||||||| |||| || || | ||||||||||
Sbjct 3175145 CAGCGTTTGATCTTCGCCGGCAAGCAGCTGGAGGACGGACGTACTTTGTCCGACTACAAC 3175204
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471
||||| ||||| |||| || || |||||||| || || | || |||
Sbjct 3175205 ATCCAGAAGGAGTCGACCCTCCACTTGGTGCTCCGCCTGCGCGGAGGC 3175252
Score = 127 bits (140), Expect = 2e-24
Identities = 165/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || || || ||||| ||||||||| |||| |||||| || |
Sbjct 3175253 ATGCAGATCTTCGTGAAGACTCTGACTGGCAAGACCATCACCCTCGAGGTCGAGCCCTCG 3175312
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | | | | | || | || |||| ||||| ||||| |||||| | || ||
Sbjct 3175313 GACACCATCGAGAATGTCAAGGCTAAGATCCAGGACAAGGAGGGCATTCCCCCAGATCAG 3175372
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||||| | || | ||| ||||| |||||||| |||| || || | ||| ||||||
Sbjct 3175373 CAGCGTTTGATCTTCGCCGGCAAGCAGCTGGAGGACGGACGTACTTTGTCCGATTACAAC 3175432
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471
||||| ||||| | || ||||||||||||| || || | || |||
Sbjct 3175433 ATCCAGAAGGAGTCCACCTTGCATTTGGTGCTCCGCCTGCGCGGTGGC 3175480
Score = 127 bits (140), Expect = 2e-24
Identities = 165/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || || || || || || || ||||| ||||||||| |||| |||||| || |
Sbjct 3175481 ATGCAGATCTTTGTCAAGACTCTGACTGGCAAGACCATCACCCTCGAGGTCGAGCCCTCG 3175540
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | | | | | || | || |||| ||||| ||||| |||||| | || ||
Sbjct 3175541 GACACCATCGAGAATGTCAAGGCTAAGATCCAGGACAAGGAGGGCATTCCCCCAGATCAG 3175600
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||||| | || | ||| ||||| |||||||| |||| || || | ||||||||||
Sbjct 3175601 CAGCGTTTGATCTTCGCCGGCAAGCAGCTGGAGGACGGACGTACTTTGTCCGACTACAAC 3175660
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471
||||| ||||| | || ||||||||||||| || || | || |||
Sbjct 3175661 ATCCAGAAGGAGTCCACCTTGCATTTGGTGCTCCGCCTGCGCGGTGGC 3175708
Score = 123 bits (136), Expect = 2e-23
Identities = 164/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || || || || || || || ||||| || |||||| |||| |||||| || |
Sbjct 3174113 ATGCAGATCTTTGTCAAGACTCTGACTGGCAAGACTATCACCCTCGAGGTCGAGCCCTCG 3174172
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | | | | | || | || |||| ||||| ||||| |||||| | || ||
Sbjct 3174173 GACACCATCGAGAATGTCAAGGCTAAGATCCAGGACAAGGAGGGCATTCCCCCAGATCAG 3174232
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||||| | || | ||| ||||| |||||||| |||| || || | ||||||||||
Sbjct 3174233 CAGCGTTTGATCTTCGCCGGCAAGCAGCTGGAGGACGGACGTACTTTGTCCGACTACAAC 3174292
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471
||||| ||||| | || ||||||||||||| || || | || |||
Sbjct 3174293 ATCCAGAAGGAGTCCACCTTGCATTTGGTGCTCCGCCTGCGCGGTGGC 3174340
Score = 123 bits (136), Expect = 2e-23
Identities = 164/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || || || || || || || ||||| ||||||||| |||| |||||| || |
Sbjct 3174341 ATGCAGATCTTTGTCAAGACTCTGACTGGCAAGACCATCACCCTCGAGGTCGAGCCCTCG 3174400
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | | | | | || | || |||| ||||| ||||| |||||| | || ||
Sbjct 3174401 GACACCATCGAGAATGTCAAGGCTAAGATCCAGGACAAGGAGGGCATTCCCCCAGATCAG 3174460
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||||| | || | ||| ||||| |||||||| |||| || || | ||| ||||||
Sbjct 3174461 CAGCGTTTGATCTTCGCCGGCAAGCAGCTGGAGGACGGACGTACTTTGTCCGATTACAAC 3174520
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471
||||| ||||| | || ||||||||||||| || || | || |||
Sbjct 3174521 ATCCAGAAGGAGTCCACCTTGCATTTGGTGCTCCGCCTGCGCGGTGGC 3174568
Score = 123 bits (136), Expect = 2e-23
Identities = 164/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || || || || || || || ||||| ||||||||| |||| |||||| || |
Sbjct 3174569 ATGCAGATCTTTGTCAAGACTCTGACTGGCAAGACCATCACCCTCGAGGTCGAGCCCTCG 3174628
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | | | | | || | || |||| ||||| ||||| |||||| | || ||
Sbjct 3174629 GACACCATCGAGAATGTCAAGGCTAAGATCCAGGACAAGGAGGGCATTCCCCCAGATCAG 3174688
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||||| | || | ||| ||||| |||||||| |||| || || | ||| ||||||
Sbjct 3174689 CAGCGTTTGATCTTCGCCGGCAAGCAGCTGGAGGACGGACGTACTTTGTCCGATTACAAC 3174748
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471
||||| ||||| | || ||||||||||||| || || | || |||
Sbjct 3174749 ATCCAGAAGGAGTCCACCTTGCATTTGGTGCTCCGCCTGCGCGGTGGC 3174796
Score = 118 bits (130), Expect = 1e-21
Identities = 163/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || || || || || || || ||||| ||||||||| |||| |||||| || |
Sbjct 3175709 ATGCAGATCTTTGTCAAGACTCTGACTGGCAAGACCATCACCCTCGAGGTCGAGCCCTCG 3175768
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | | | | | || | || |||| ||||| ||||| |||||| | || ||
Sbjct 3175769 GACACCATCGAGAATGTCAAGGCTAAGATCCAGGACAAGGAGGGCATTCCCCCAGATCAG 3175828
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||||| | || | ||| ||||| |||||||| |||| || || | ||| ||||||
Sbjct 3175829 CAGCGTTTGATCTTCGCCGGCAAGCAGCTGGAGGACGGACGTACTTTGTCCGATTACAAC 3175888
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471
||||| ||||| | || |||| ||||| ||||| | | ||||||
Sbjct 3175889 ATCCAGAAGGAGTCCACTTTGCACTTGGTATTGCGTCTTCGTGGCGGC 3175936
>seq7
Length=13333775
Score = 116 bits (128), Expect = 4e-21
Identities = 232/338 (69%), Gaps = 7/338 (2%)
Strand=Plus/Minus
Query 107496 CGGCCGCCCGAGTTGCCGGTGGTCTTGCTCAACGGATGGTCGGTGAGGCCCAGATCGTCC 107555
||| |||| | ||||||||||||||||| | | || | ||||| || ||
Sbjct 10666506 CGGGCGCCGGCATTGCCGGTGGTCTTGCTTAGCTCGTGACCACCCTTGCCCAAGTCATCA 10666447
Query 107556 CTGTCCGTGTGCACGACCAGACTCCGTCCGATGATGCTGTGCGGGCCGTACAAAGTCA-C 107614
||| | ||| ||||||| | ||||| |||||||| | | ||| ||| || | |
Sbjct 10666446 GCGTCGGCGTGAACGACCACGGTGCGTCCTATGATGCTATCGGCACCGAACAGCGTGATC 10666387
Query 107615 GACGCCGTCCGTCAAGCTCACCTCGGTGAGCGCGTCGCGGCCCGCCGACTTGAGGTTGCC 107674
|| ||| || | ||| || | ||| | ||| | | | ||| | || ||||||
Sbjct 10666386 TTCGA-GTCGGTGATGCTGACGGCCGTGGGGCTGTCACCGGCTGCC---TGGATGTTGCC 10666331
Query 107675 CAGGTCGCCGACGTGCCTGATCTCGGCGTCGGGCGCGCCGTGGTCGCGCTTCGTCGGGTT 107734
|| |||||| | ||| | | ||||| || ||| || ||||| || ||| |||||
Sbjct 10666330 CAAGTCGCCCAAGTGGCGGTTCTCGTCGGTGGGGGCACCGTGCTCCTTGTTCCGGGGGTT 10666271
Query 107735 GAAATGCTCGCCGGCCGACGTGCAGCCGTTGCTCGCGTCGCCGAACTCGTGCACGTGGAA 107794
|| || ||||| |||| ||||||||||| | ||| |||||||||||||| |||||
Sbjct 10666270 AAAGTGGGGGCCGGACGACATGCAGCCGTTGGTGTTGTCCCCGAACTCGTGCACATGGAA 10666211
Query 107795 GCCGTGCAGGCCGCGCGGC-AGGCCGAGCACGTAGCCG 107831
|||||||| || | ||| ||||| ||||| | ||||
Sbjct 10666210 TCCGTGCAGTCC-CTTGGCAAGGCCCAGCACCTCGCCG 10666174
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500142852153600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |