Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20pseudoobscura_20pseudoobscura_20[refseq_20GCF_5F0000017
65.3_202013-04-11] 4,790 sequences; 152,696,384 total letters
Query= NC_014765.1
Length=198519
Score E
Sequences producing significant alignments: (Bits) Value
seq9 334 1e-86
seq3 145 1e-29
>seq9
Length=30819483
Score = 334 bits (370), Expect = 1e-86
Identities = 756/1127 (67%), Gaps = 12/1127 (1%)
Strand=Plus/Minus
Query 7019 AAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTA 7078
||||||||||| ||||| | || || || || || ||||||||||| || |||| ||
Sbjct 28008319 AAGATGGCGGCCTGGACGGCGGCACCATAGGCAACAGCCTCATCGGGATTGATCGACTTG 28008260
Query 7079 TTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTC 7138
||||| || || ||||| || |||| | || | || | || ||||| || ||
Sbjct 28008259 TTCAGCTCCTTGCCGTTGAACAGATCCTGGAGCAGGCGCTGCACCTTGGGGATACGGGTG 28008200
Query 7139 GATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGT 7198
|| |||||||||| || || || | | ||| || || | ||| | ||| || ||
Sbjct 28008199 GAGCCACCGACCAGCACAATGTCGTGGATGGCCGACTTGTCCAGCTTGGCGTCACGCAGA 28008140
Query 7199 GTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGT 7258
| || || || || ||||| | ||||||| || ||| ||||| |||||
Sbjct 28008139 GCCTTCTCCACGGGGTCCATGGTGCTGCGGAACAGATCGGCGTTCAGCTCCTCGAAACGG 28008080
Query 7259 GCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTT 7318
||||| || || || || |||||||| || ||| | | || ||||| |||||| |
Sbjct 28008079 GCACGAGTGATCGAGGTGTAGAAATCGGTACCCTCGAACAGAGAGTCAATCTCAATGCTG 28008020
Query 7319 GTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGA 7378
| || | | ||| || | || |||||||||||||| || || || || | ||||||
Sbjct 28008019 GCCTGGGTGGACGACGAGAGGGTACGCTTTGCGCGCTCGCAGGCGGTGCGCAGACGACGC 28007960
Query 7379 AGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACT-CTTCAGAGAA 7437
|| |||||| ||| | || | || ||||| || || || || |||| || || | ||
Sbjct 28007959 AGAGCACGCTTGTTGCTGGTCAGGTCCTTCTTGTGCTTGCGCTTGAACTCCTGCACA-AA 28007901
Query 7438 GTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGC 7497
||| | || | |||||||| |||||||| | || ||||| || || || |
Sbjct 28007900 GTGGGTCACTAGACGGTTGTCGAAATCCTCACCACCAAGATGGGTATCACCGGCCGTAGA 28007841
Query 7498 TTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACC 7557
|||||| || ||||| || | || || | | || ||||| || ||||| |||||
Sbjct 28007840 TTTGACCTCGAAGATGCCGTCATCGATCGACAGAATGGACACATCGAAGGTACCGCCACC 28007781
Query 7558 CAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGAT 7617
||| || ||||| || ||||| || | | ||||| || || || || |||||
Sbjct 28007780 CAGATCGAAAATAAGCACGTTGCGCTCACCAACAGCCTTCTTGTCCAGGCCATAGGCGAT 28007721
Query 7618 AGCCGCCGCCGTTGGTTCATTAATAATACGAAG-ACAGTTCAGGCCAGCAATAGTTGCCG 7676
||| || || || || || || || ||||| || ||| |||| || ||||| || | |
Sbjct 28007720 AGCAGCGGCTGTGGGCTCGTTGATGATACGCAGCACA-TTCAATCCGGCAATGGTACCGG 28007662
Query 7677 CATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGT 7736
|||| || ||||| || || ||||| ||||| |||||||| || || || | ||| || |
Sbjct 28007661 CATCCTTGGTCGCCTGACGCTGCGAGTCGTTGAAGTAGGCTGGCACAGTGATGACGGCAT 28007602
Query 7737 CCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCG 7796
|| ||| |||| || || |||| || ||| | || ||||||||||| | ||||| |
Sbjct 28007601 TGGTCACTGTCTTGCCCAGGTACGCCTCGGCGGTCTCCTTCATTTTGGTCAACACCATGG 28007542
Query 7797 ATGAAATCTCTTCAGCCGCAAACTGT-TTCGTTTCACCGTTAAAATCAACTTCAATCATG 7855
| || ||||| || | | | | || ||| | ||| | || | ||| |||||| ||
Sbjct 28007541 AGGAGATCTCCTC-GGGGAAGAAGGTCTTCTTCTCATCCTTGTACGTAACCTCAATCTTG 28007483
Query 7856 GGTTTATCCGCAGCACCGGGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACC 7915
|| || || | || || || | | | ||| | ||||| || || ||
Sbjct 28007482 GGCTT---GCCATCTACGCTGACCACATCGAAGGGCCAGTGCTTCATGTCAGACTGCACA 28007426
Query 7916 TGTTGGTCCGAAAACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGG 7975
||| |||||| | || || |||||||| ||||| || | || | | |||
Sbjct 28007425 GCAGAATCCTCAAACTTGCGACCAATCAGACGCTTGGCATCGAAGATCGTTTGGGTTGGG 28007366
Query 7976 TTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAAC 8035
||||| || || ||||| || || || || || | ||| || | ||||| ||
Sbjct 28007365 TTCATCGCCACCTGATTCTTGGCGGCATCACCAATCAAACGCTC---CGTGTCCGTGAAG 28007309
Query 8036 GCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCG 8095
|| || || ||||| ||||| ||||| || |||||||| ||||| || || || | |
Sbjct 28007308 GCAACATAGGATGGTGTCGTACGATTACCCTGGTCGTTGGCAATGATCTCGACCTTGCCA 28007249
Query 8096 TTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAAATCAATACC 8142
| || | || || || || || || ||||| || |||||||||||
Sbjct 28007248 TGCTGGAACACACCCACACAAGAGTAGGTTGTGCCCAAATCAATACC 28007202
Score = 271 bits (300), Expect = 1e-67
Identities = 761/1156 (66%), Gaps = 24/1156 (2%)
Strand=Plus/Plus
Query 7019 AAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTA 7078
||||||||||| ||||| | || || || || || ||||||||||| | ||||| ||
Sbjct 27747449 AAGATGGCGGCCTGGACGGCGGCGCCATAGGCAACAGCCTCATCGGGATCAATCGACTTG 27747508
Query 7079 TTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTC 7138
||||| || || ||||| || |||| | || | || | || ||||| || ||
Sbjct 27747509 TTCAGCTCCTTGCCGTTGAACAGATCCTGGAGCAAGCGCTGCACCTTGGGGATACGGGTG 27747568
Query 7139 GATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGT 7198
|| ||||||||||| || || || | | ||| || || | ||| | ||| || ||
Sbjct 27747569 GAGCCACCGACCAACACAATGTCGTGGATGGCCGACTTGTCCAGCTTGGCGTCACGCAGA 27747628
Query 7199 GTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGT 7258
| || || || || ||||| | ||||||| || ||| ||||| ||||
Sbjct 27747629 GCCTTCTCCACGGGATCCATGGTGCTGCGGAACAGATCGGCGTTCAGCTCCTCGAAACTG 27747688
Query 7259 GCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTT 7318
||||| || || || || |||||||| || ||| | | || ||||| ||||| |
Sbjct 27747689 GCACGAGTGATCGAGGTGTAGAAATCGGTACCCTCGAACAGAGAGTCAATCTCAATTCTG 27747748
Query 7319 GTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGA 7378
| | | | ||| || | || |||||||||||||| || || || || | ||||||
Sbjct 27747749 GCCAGAGTGGACGATGAGAGGGTGCGCTTTGCGCGCTCGCAGGCGGTGCGCAGACGACGC 27747808
Query 7379 AGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACT-CTTCAGAGAA 7437
|| |||||| ||| | || | || ||||| || || || || |||| || || | ||
Sbjct 27747809 AGAGCACGCTTGTTGCTGGTCAGGTCCTTCTTGTGATTGCGATTGAACTCCTGCACA-AA 27747867
Query 7438 GTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGC 7497
||| | || | |||||||| |||||||| | || ||||| || || || |
Sbjct 27747868 GTGGGTCACTAGACGGTTGTCGAAATCCTCACCACCAAGATGGGTATCACCGGCCGTAGA 27747927
Query 7498 TTTGACTTCAAAGATACC-TCCTTCAATGTTTAACAA-CGAAACATCAAACGTACCACCA 7555
|||||| | ||||| || || || | | || || || ||||| || ||||| |||
Sbjct 27747928 TTTGACCTTGAAGATGCCATCATTGATCG--AAAGAATGGACACATCGAAGGTACCGCCA 27747985
Query 7556 CCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCG 7615
||||| || ||||| || ||||| || | | ||||| || || || || |||
Sbjct 27747986 CCCAGATCGAAAATAAGCACGTTGCGCTCACCAACAGCCTTCTTGTCCAGGCCATAGGCG 27748045
Query 7616 ATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCC 7675
|| || || ||||| || || || || ||||| || |||| || || || || |
Sbjct 27748046 ATTGCAGCGGCCGTGGGCTCGTTGATGATACGCAGGACTTTCAAACCGGCGATGGTACCG 27748105
Query 7676 GCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCG 7735
||||| || || || || || ||||| ||||| |||| ||| || || | | ||| ||
Sbjct 27748106 GCATCCTTGGTAGCCTGACGCTGCGAGTCGTTGAAGTGGGCTGGCACAGAGATGACAGCT 27748165
Query 7736 TCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATC 7795
| || || |||| || || ||| || ||| | || ||||||||||| | |||||
Sbjct 27748166 TTGGTCACCGTCTTGCCCAGGTACTCCTCGGCGGTCTCCTTCATTTTGGTCAACACCATG 27748225
Query 7796 GATGAAATCTCTTCAGCCGCAAACTGT-TTCGTTTCACCGTTAAAATCAACTTCAATCAT 7854
| || ||||| || | || | | || ||| | || | || | ||| |||||| |
Sbjct 27748226 GCAGAGATCTCCTC-GGCGAAGAAGGTCTTCTTCTCGTCCTTGTACGTAACCTCAATCTT 27748284
Query 7855 GGGTTTATCCGCAGCACCGGGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGAC 7914
||| || | | ||| || || | | | ||| | ||||| || | |||||
Sbjct 27748285 GGGCTTGCCGTCTACAC---TGACCACATCGAAGGGCCAGTACTTCATGTCAGCCTGGAC 27748341
Query 7915 CTGTTGGTCCGAAAACTTTCTTCCGATAAGACGCTTTGCATCAAAAA--CTGTGTTTTTG 7972
||| |||||| | || || |||||||| | || || | || || |||
Sbjct 27748342 AGCAGAATCCTTAAACTTGCGACCAATCAGACGCTTCGATTCGAAGATCCTCTGGTTT-- 27748399
Query 7973 GGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTA 8032
||||||| | |||||||| || || || || || | || || || |||||
Sbjct 27748400 GGGTTCACCGTCACCTGGTTCTTGGCGGCATCACCAATCAAGCGCTCCGTA---TCCGTG 27748456
Query 8033 AACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGG 8092
|| || || || |||| || || ||||| || |||||||| ||||| || || || |
Sbjct 27748457 AAGGCAACATAGGATGATGTGGTACGATTACCCTGGTCGTTGGCAATGATCTCGACCTTG 27748516
Query 8093 TCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAAATCAATACCGAT------T 8146
| || || | || || || || | | ||||| || ||||||||||| || |
Sbjct 27748517 CCATTCTGGAACACACCCACACAGCAGTGAGTTGTGCCCAAATCAATACCAATAGCAGGT 27748576
Query 8147 GCTTGAGTCATTTTAT 8162
|||| || ||| ||||
Sbjct 27748577 GCTTCAGACATCTTAT 27748592
Score = 206 bits (228), Expect = 3e-48
Identities = 679/1039 (65%), Gaps = 31/1039 (3%)
Strand=Plus/Plus
Query 7124 TTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGAT-TTATCGAT 7182
|| || || ||||| ||||| || |||| ||||| || | || | | | | || || ||
Sbjct 14411451 TTGGGAATGCGTGTTGATCCGCCCACCAGGACGATGTCGT-CAATCTTGCTCTTGTCCAT 14411509
Query 7183 CTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACA 7242
||| | ||| || | || || || |||| || || ||||| | ||| ||
Sbjct 14411510 CTTGGCGTCGTTCAGGGCCTTCTCCACGGGTTGCAGGGTGTTCCGGAAGAGGTCTCCGCA 14411569
Query 7243 CAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGA 7302
|| ||||| || || |||||| | | ||| ||||| || || ||| | | |
Sbjct 14411570 TAGCTCCTCGAAGCGGGCACGGCTGACCTTTGTGTAGAAGTCGTGTCCCTCGAACAGGGC 14411629
Query 7303 ATCAATTTCAATGGTTGTTT--GTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACAC 7360
||| | ||| ||||||| | |||| | ||||| | ||||||||| || ||||||
Sbjct 14411630 ATCCACTTCGATGGTTGCCTCAGTGCTG--GAAGACAGCGTTCGCTTGGCCCGCTCAGCT 14411687
Query 7361 GCCGTTCGTAAACGACGAAGGGCACGCGGGTT--ACCGGAAATATCTTTCTTATGTTTAC 7418
|| || || | ||| || |||||||| || || | || || | | ||||| || |
Sbjct 14411688 GCGGTGCGGAGACGGCGCAGGGCACGAGGATTGGAGCGCAAGT--CCTTCTTGAACTTTC 14411745
Query 7419 GTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGT 7478
| || ||||| || | | ||| | ||||| || || || || ||||||||||
Sbjct 14411746 GCTTGAACTCCTCCGCCAGGTGGTTCACCAGTCTGTTGTCAAAGTCCTCGCCACCCAAGT 14411805
Query 7479 GTGTATCCCCCGCGGTCGCTTTGACTTCAAA----GATACCTCCTTCAATGTTTAACAAC 7534
| || || || || || || || || || ||| ||| | || ||| | | |
Sbjct 14411806 GAGTGTCTCCGGCAGTGGCGCGCACCTCGAACAGCGAT-CCTTCGTCGATGGTCAGAATA 14411864
Query 7535 GAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCG-TCGTCTTT 7593
|| |||||||| || || |||||||| || || || || || || || || | ||
Sbjct 14411865 GAGACATCAAAGGTGCCGCCACCCAGATCGAAGATCAGCACATTG----CGCTCCCCCTT 14411920
Query 7594 G---TTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAG 7650
| ||||| || || || || || | ||| || ||||| || || || || || || |
Sbjct 14411921 GAGATTCTTGTCCAGGCCATATGCCAGAGCTGCTGCCGTCGGCTCGTTGATGATGCGCA- 14411979
Query 7651 ACA-GTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAA 7709
||| ||| ||||| || || | | | |||||||| || || || || || || |||||||
Sbjct 14411980 ACACGTTGAGGCCGGCGATGGCTCCGGCATCTTTGGTGGCCTGGCGCTGGGAGTCGTTAA 14412039
Query 7710 AGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGA 7769
|||| || || || || | || ||||| ||| | || || |||| || ||
Sbjct 14412040 AGTACGCTGGCACTGTGATAACTGCGTCGCGCACTGAGGTGCCCAGGTACGCCTCGGCCG 14412099
Query 7770 TATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTTT 7829
| || ||||| ||| || |||||||| || || || | ||||| | ||| |
Sbjct 14412100 TCTCCTTCATCTTGACGAGCACCATCGAGCTGATTTCCTCCGGGGCAAAGCGCTTCACCT 14412159
Query 7830 CACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAACCTTATACG 7889
| || || || ||||| ||| | || || |||||| || || ||||| | |
Sbjct 14412160 CGCCCTTGAACTCAACACTCATCTTTGGCTT-GCCGCAG--TCGTTGACCACCTTGAAGG 14412216
Query 7890 ACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGACGCT 7949
||| | ||||| || || |||| || ||| ||||| | || || || ||||
Sbjct 14412217 GCCAGTGCTTCATGTCATCCTGGATCTTCGAGTCGTCGAACTTGCGCCCAATCAGGCGCT 14412276
Query 7950 TTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGA 8009
| || || || || |||| || || ||||| || |||||||| || ||||| ||||
Sbjct 14412277 TGGCGTCGAACACACTGTTCTTCGGATTCATCGCCACCTGGTTCTTGGCGGCGTCTCCGA 14412336
Query 8010 TAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGT 8069
| || || || | || || || || || || || || || || || || || |
Sbjct 14412337 TGAGGCGCTCCGAA---TCGGTGAATGCCACATAACTGGGCGTTGTGCGGTTTCCCTGAT 14412393
Query 8070 CGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTC 8129
|||| || || ||||| || ||| || |||| ||||||||||| ||||| || |
Sbjct 14412394 CGTTGGCGATTATTTCCACCTTTCCGTGCTGGAAGACACCGACGCACGAGTACGTGGTGC 14412453
Query 8130 CTAAATCAATACCGATTGC 8148
| || ||||| || || ||
Sbjct 14412454 CCAAGTCAATGCCAATGGC 14412472
Score = 190 bits (210), Expect = 3e-43
Identities = 601/917 (66%), Gaps = 21/917 (2%)
Strand=Plus/Minus
Query 7241 CACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAAC 7300
||||||||||| |||||||| ||| | || || ||| | || ||| ||| | |
Sbjct 5524903 CACAGTTCCTCGAAACGTGCGCGGCTCATCTTGGTGTAGTAGTCGTGGCCCTCGAACAGA 5524844
Query 7301 GAATCAATTTCAATGGTTG--TTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCAC 7358
| || || |||||||| | | |||| | || || | || ||||| || |||||
Sbjct 5524843 GCGTCTATCTCAATGGTCGCCTCCGTGC--TGGAGGAGAGGGTGCGCTTGGCCCGCTCGG 5524786
Query 7359 ACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTAC 7418
||||||||| | || || || ||||| ||||| | | ||| ||||| |||||
Sbjct 5524785 CCGCCGTTCGGAGGCGTCGCAGAGCACGAGGGTTGGAGCGCAGATCCTTCTTGAATTTAC 5524726
Query 7419 GTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGT 7478
| || ||||| || | | |||| | |||| || || || || || |||| ||
Sbjct 5524725 GCTTGAACTCGTCTGCCAGGTGTGTGACCAGTCGGTTGTCAAAGTCCTCGCCGCCCAGGT 5524666
Query 7479 GTGTATCCCCCGCGGTCGCTTTGACTTCAAA----GATACCTCCTTCAATGTTTAACAAC 7534
| || || || || || || || ||||| ||| ||| | || ||| | | |
Sbjct 5524665 GGGTGTCTCCGGCAGTGGCCCGCACCTCAAACAGGGATCCCT-CGTCGATGGTGAGGATG 5524607
Query 7535 GAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTG 7594
|| || || || || || || |||||||| || ||||| ||||| || | |
Sbjct 5524606 GACACGTCGAAGGTTCCGCCGCCCAGGTCGAAGATGAGCACGTTGCGCTCACCCTTCAGA 5524547
Query 7595 TTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATAC-GAAGACA 7653
||||| || || || || || | || |||||||| || ||||| | || | || |||
Sbjct 5524546 TTCTTGTCCAGCCCATAGGCCAGCGCGGCCGCCGTCGGCTCATTGACGATTCTGAGCACA 5524487
Query 7654 GTTCAGGCCAGCAATAGTTGCC-GCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGT 7712
|| ||||| || || | ||| ||||| ||||| || || || || || ||||| ||||
Sbjct 5524486 -TTGAGGCCTGCGAT-GCGGCCAGCATCCTTCGTGGCCTGGCGCTGTGAGTCGTTGAAGT 5524429
Query 7713 AGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATAT 7772
|||| || || || | ||| ||||| |||| ||| || ||||| | || || | |
Sbjct 5524428 AGGCAGGCACTGTGATGACTGCGTCTGTGATGGTCTGGCCCAGATAAGCCTCGGCCGTCT 5524369
Query 7773 CTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTTTCAC 7832
| ||||||||| || |||||||| ||||| || | | ||| | |||| ||| |
Sbjct 5524368 CCTTCATTTTGACCAGCACCATCGAGCTGATCTCCTCCGGGGAAAAGCGCTTCGCTTCGC 5524309
Query 7833 CGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAACCTTATACGACC 7892
| || || ||||| ||||| | || || || | || || | ||||| ||| ||
Sbjct 5524308 CCTTGAACTCAACACCAATCTTTGGCTT-GCCTC--CATCGCTTACCACCTTGAACGGCC 5524252
Query 7893 AATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGACGCTTTG 7952
| | || || || || | || | || || | | || || || ||||| |
Sbjct 5524251 AGTGCTTGATGTCCTCCGCAATCTTGGGATCGTCGTACCTGCGCCCAATCAGGCGCTTCG 5524192
Query 7953 CATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAA 8012
|||| || ||||| || || |||||||| || |||||||| || || || || || |
Sbjct 5524191 CATCGAACACTGTATTCTTCGGGTTCATCGCCACCTGGTTCTTGGCGGCATCGCCAATCA 5524132
Query 8013 GACGTTCATTATTTTCCGTAAACGCGACGTACGATGGG-GTCGTTCGATTCCCTTGGTCG 8071
| || || || || || | || || | |||| ||||| || || || ||||||
Sbjct 5524131 GGCGCTC---CGACTCTGTGAATCCCACATA-GCTGGGCGTCGTCCGGTTTCCCTGGTCG 5524076
Query 8072 TTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCT 8131
|| || || || || || ||| || |||| || ||||| || ||||| || ||
Sbjct 5524075 TTGGCGATGATCTCCACCTTTCCGTGCTGGTAGACACCCACGCAGGAGTACGTGGTGCCC 5524016
Query 8132 AAATCAATACCGATTGC 8148
|| || || || || ||
Sbjct 5524015 AAGTCGATGCCAATAGC 5523999
Score = 165 bits (182), Expect = 1e-35
Identities = 502/767 (65%), Gaps = 18/767 (2%)
Strand=Plus/Plus
Query 7226 CGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCA 7285
||||||| |||||| ||| ||||| || || ||||| | ||| | |||||| |||
Sbjct 11251575 CGGAACAGGTCCATGTTCAGCTCCTCGAAGCGGGCACGCGAAATCTTCGAATAGAAGTCA 11251634
Query 7286 ACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTT--GTGCCGTCGAAGATAACGTTC 7343
| ||| |||| || | |||||| || | || | | |||| | || || | ||| |
Sbjct 11251635 ATGCCCTCGTGCAAGGCATCAATCTCCAAGGAGGCCTCCGTGCTG--GAGGACAGCGTGC 11251692
Query 7344 GCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATAT 7403
|||| || ||||| || || || || | || |||||||| ||| || || || |
Sbjct 11251693 GCTTGGCCCGCTCGCAGGCAGTGCGCAGGCGGCGAAGGGCCCGCACATTGCCCTTGATGT 11251752
Query 7404 CTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAAT 7463
| ||| | || || || ||||| || |||||| | || | ||||| |
Sbjct 11251753 CGGCCTTGTACTTGCGCTTGAACTCCTCCATGAAGTGGTTGACCAGACGGTTGTCGAAGT 11251812
Query 7464 CTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGAT--ACCTC-CTT 7520
| || || |||| || || || || || || || ||||| ||||| | ||| | | |
Sbjct 11251813 CCTCGCCGCCCAGATGGGTGTCGCCGGCCGTGGCCTTGACCTCAAACAGCGACCCCTCGT 11251872
Query 7521 CAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTT-C 7579
| ||| | | | || || || || || || || |||| || || || || ||||| |
Sbjct 11251873 CGATGGTCAGAATGGACACGTCGAAGGTGCCGCCGCCCAAATCGAATATCAGAACGTTGC 11251932
Query 7580 GTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTA 7639
|| ||| | | ||||| || ||||||||||| | || || ||||| || || ||
Sbjct 11251933 GT-TCGCCCTTCAGATTCTTGTCCAGACCGTACGCCAAGGCAGCGGCCGTGGGCTCGTTG 11251991
Query 7640 ATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGC 7699
|| || | || ||| || || ||||| | | ||||| || ||||| || || ||
Sbjct 11251992 ATTATTCTGAGCACGTTGAGACCGGCAATGGAGCCGGCATCCTTGGTCGCCTGCCGCTGG 11252051
Query 7700 GAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATAC 7759
||||| ||||||||||| || || | ||| || ||| | || || ||| ||||||
Sbjct 11252052 CTGTCGTTGAAGTAGGCCGGCACTGTGATGACGGCATCCTTCACCTTGCCACCCAGATAC 11252111
Query 7760 GATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAAC 7819
||| ||||| || ||| ||||| || |||||||| ||||| || | |||||
Sbjct 11252112 AGTTCGGCGATCTCGCGCATCTTGGTCAGGACCATCGAGCTGATCTCCTCGGGGGCAAAG 11252171
Query 7820 TGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATA 7879
| || || || || || || | ||||| |||| || || | ||| | ||
Sbjct 11252172 CGCTTGCGCTCGCCCTTGAACTCGATCTCAATTTTGGGCTT----GC--CCCCGTCGTTA 11252225
Query 7880 ---ACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTT 7936
|| || | | ||| | || | || || |||| || | ||| ||||| |
Sbjct 11252226 ACGACTTTGAAGGGCCAGTGCTTGAGGTCCTCCTGGATCTTCTTGTCGTCGAACTTGCGG 11252285
Query 7937 CCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGC 7983
|| || || || || ||||| || || || || |||| |||||||||
Sbjct 11252286 CCAATCAGGCGTTTCGCATCGAAGACCGTATTCTTGGCGTTCATGGC 11252332
Score = 143 bits (158), Expect = 3e-29
Identities = 375/563 (67%), Gaps = 13/563 (2%)
Strand=Plus/Plus
Query 7241 CACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAAC 7300
||||||||||| |||||||| ||| | || || ||| | || ||| ||| | |
Sbjct 5520700 CACAGTTCCTCGAAACGTGCGCGGCTCATCTTGGTGTAGTAGTCGTGGCCCTCGAACAGA 5520759
Query 7301 GAATCAATTTCAATGGTTG--TTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCAC 7358
| || || |||||||| | | |||| | || || | || ||||| || |||||
Sbjct 5520760 GCGTCTATCTCAATGGTCGCCTCCGTGC--TGGAGGAGAGGGTGCGCTTGGCCCGCTCGG 5520817
Query 7359 ACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTAC 7418
||||||||| | || || || ||||| ||||| | | ||| ||||| |||||
Sbjct 5520818 CCGCCGTTCGGAGGCGTCGCAGAGCACGAGGGTTGGAGCGCAGATCCTTCTTGAATTTAC 5520877
Query 7419 GTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGT 7478
| || ||||| || | | |||| | |||| || || || || || |||| ||
Sbjct 5520878 GCTTGAACTCGTCTGCCAGGTGTGTGACCAGTCGGTTGTCAAAGTCCTCGCCGCCCAGGT 5520937
Query 7479 GTGTATCCCCCGCGGTCGCTTTGACTTCAAA----GATACCTCCTTCAATGTTTAACAAC 7534
| || || || || || || || ||||| ||| ||| | || ||| | | |
Sbjct 5520938 GGGTGTCTCCGGCAGTGGCCCGCACCTCAAACAGGGATCCCT-CGTCGATGGTGAGGATG 5520996
Query 7535 GAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTG 7594
|| || || || || || || |||||||| || ||||| ||||| || | |
Sbjct 5520997 GACACGTCGAAGGTTCCGCCGCCCAGGTCGAAGATGAGCACGTTGCGCTCACCCTTCAGA 5521056
Query 7595 TTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATAC-GAAGACA 7653
||||| || || || || || | || |||||||| || ||||| | || | || |||
Sbjct 5521057 TTCTTGTCCAGCCCATAGGCCAGCGCGGCCGCCGTCGGCTCATTGACGATTCTGAGCACA 5521116
Query 7654 GTTCAGGCCAGCAATAGTTGCC-GCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGT 7712
|| ||||| || || | ||| ||||| ||||| || || || || || ||||| ||||
Sbjct 5521117 -TTGAGGCCTGCGAT-GCGGCCAGCATCCTTCGTGGCCTGGCGCTGTGAGTCGTTGAAGT 5521174
Query 7713 AGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATAT 7772
|||| || || || | ||| ||||| |||| ||| || ||||| | || || | |
Sbjct 5521175 AGGCAGGCACTGTGATGACTGCGTCTGTGATGGTCTGGCCCAGATAAGCCTCGGCCGTCT 5521234
Query 7773 CTTTCATTTTGGTAAGAACCATC 7795
| ||||||||| || ||||||
Sbjct 5521235 CCTTCATTTTGACCAGCACCATC 5521257
Score = 134 bits (148), Expect = 2e-26
Identities = 359/543 (66%), Gaps = 8/543 (1%)
Strand=Plus/Minus
Query 7607 CCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACA-GTTCAGGCCAGC 7665
|| || || | ||| || ||||| || || || || || || | ||| ||| ||||| ||
Sbjct 14415199 CCATATGCCAGAGCTGCTGCCGTCGGCTCGTTGATGATGCGCA-ACACGTTGAGGCCGGC 14415141
Query 7666 AATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGT 7725
|| | | | |||||||| || || || || || || ||||||||||| || || || ||
Sbjct 14415140 GATGGCTCCGGCATCTTTGGTGGCCTGGCGCTGGGAGTCGTTAAAGTACGCTGGCACTGT 14415081
Query 7726 TACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGT 7785
| || ||||| ||| | || || |||| || || | || ||||| |||
Sbjct 14415080 GATAACTGCGTCGCGCACTGAGGTGCCCAGGTACGCCTCGGCCGTCTCCTTCATCTTGAC 14415021
Query 7786 AAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTTTCACCGTTAAAATCAAC 7845
|| |||||||| || || || | ||||| | ||| || || || || |||||
Sbjct 14415020 GAGCACCATCGAGCTGATTTCCTCCGGGGCAAAGCGCTTCACCTCGCCCTTGAACTCAAC 14414961
Query 7846 TTCAATCATGGGTTTATCCGCAGCACCGGGGATAACCTTATACGACCAATCTTTCATATC 7905
||| | || || |||||| || || ||||| | | ||| | ||||| ||
Sbjct 14414960 ACTCATCTTTGGCTT-GCCGCAG--TCGTTGACCACCTTGAAGGGCCAGTGCTTCATGTC 14414904
Query 7906 GTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGT 7965
|| |||| || ||| ||||| | || || || ||||| || || || || |
Sbjct 14414903 ATCCTGGATCTTCGAGTCGTCGAACTTGCGCCCAATCAGGCGCTTGGCGTCGAACACACT 14414844
Query 7966 GTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATT 8025
||| || || ||||| || |||||||| || ||||| ||||| || || || |
Sbjct 14414843 GTTCTTCGGATTCATCGCCACCTGGTTCTTGGCGGCGTCTCCGATGAGGCGCTCCGAA-- 14414786
Query 8026 TTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTC 8085
|| || || || || || || || || || || || || ||||| || || |||||
Sbjct 14414785 -TCGGTGAATGCCACATAACTGGGTGTTGTGCGGTTGCCCTGATCGTTGGCGATTATTTC 14414727
Query 8086 TACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAAATCAATACCGAT 8145
|| ||| || |||| ||||||||||| ||||| || || || ||||| || ||
Sbjct 14414726 CACCTTTCCGTGCTGGAAGACACCGACGCACGAGTACGTGGTGCCCAAGTCAATGCCAAT 14414667
Query 8146 TGC 8148
||
Sbjct 14414666 GGC 14414664
>seq3
Length=12541198
Score = 145 bits (160), Expect = 1e-29
Identities = 247/355 (70%), Gaps = 5/355 (1%)
Strand=Plus/Minus
Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515
|||||| || || || ||||| || || || || ||| || || || || | ||
Sbjct 3932888 ATCGAAGTCCTCGCCTCCCAAATGAGTGTCACCGTTGGTGGCCACCACCTCGAACACGCC 3932829
Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTAC 7575
|| ||| | | || || ||||| || ||||| || || || || || | || ||
Sbjct 3932828 GTTATCGATGGTCAGCAGGGAGACATCGAAGGTACCGCCGCCAAGATCGAACACCAGCAC 3932769
Query 7576 GTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTC 7635
|||| | ||| | || | |||||| |||||||| || || ||||| || || |||||
Sbjct 3932768 GTTCTTCTCGCCCTCCCT---CTTATCCAGACCGTAGGCAATGGCCGCAGCAGTCGGTTC 3932712
Query 7636 ATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCC-GCATCTTTCGTCGCTTGTC 7694
|| ||||| || | | || || || ||||| | ||| ||||| || || ||||| |
Sbjct 3932711 GTTGATAATGCGCATAACATTGAGACCGGCAAT-GACGCCAGCATCCTTGGTGGCTTGAC 3932653
Query 7695 GTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGA 7754
| || | |||||| ||||||||||| || || || || |||| ||||| ||||| || |
Sbjct 3932652 GCTGGGCATCGTTGAAGTAGGCCGGCACTGTGACCACGGCGTGGGTGACCTTCTTGCCCA 3932593
Query 7755 GATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTC 7809
|||| | ||| ||| | || ||||| ||| || ||||| | || ||||| ||
Sbjct 3932592 GATAAGCTTCGGCGGTTTCCTTCATCTTGCCGAGGACCATGGCAGAGATCTCCTC 3932538
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 635094771423600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |