Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20pseudoobscura_20pseudoobscura_20[refseq_20GCF_5F0000017
65.3_202013-04-11] 4,790 sequences; 152,696,384 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq10 87.8 2e-12
>seq10
Length=19787792
Score = 87.8 bits (96), Expect = 2e-12
Identities = 117/163 (72%), Gaps = 0/163 (0%)
Strand=Plus/Plus
Query 117270 CACGGCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAG 117329
||| ||||| || ||| ||||| || || ||||| || || || || |||||| ||
Sbjct 12208033 CACCGCAAAGTCGCAGTGAAGACCTTCGTCACGGGAGATCAGCTCGTTGGAGAAGGTCAG 12208092
Query 117330 GCCTGGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAA 117389
|| ||||||||||| |||||||||| |||| | || | | || || |||||
Sbjct 12208093 ACCGGGCATGAGACCACGCTTCTTCAGCCAAAAGATCGAGGCAAAGCTGCCACTAAAGAA 12208152
Query 117390 GATACCCTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAAG 117432
||| || ||||| |||||| |||| || |||||||| |||
Sbjct 12208153 GATTCCTTCCACGGCCGCAAAGGCAATAATACGCTCGGCAAAG 12208195
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589945474899600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |