Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20pseudoobscura_20pseudoobscura_20[refseq_20GCF_5F0000017
65.3_202013-04-11] 4,790 sequences; 152,696,384 total letters
Query= NC_015280.1
Length=181044
Score E
Sequences producing significant alignments: (Bits) Value
seq9 100 3e-16
>seq9
Length=30819483
Score = 100 bits (110), Expect = 3e-16
Identities = 81/98 (83%), Gaps = 0/98 (0%)
Strand=Plus/Minus
Query 153894 GCATACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGGAGAGACAAAGCAACCAGT 153953
|| ||| | || ||||| ||||| ||||| ||||| ||| || | ||||| || |||||
Sbjct 7419481 GCCTACCGCTTGGCACTGCAGACGAGAGAACAGCACATCCGGCGGGACAAGGCCACCAGC 7419422
Query 153954 AACATCTGCACAGCTCAGGCACTGCTGGCTAATATGTC 153991
||||| |||||||||||||| |||||||| ||||||||
Sbjct 7419421 AACATTTGCACAGCTCAGGCGCTGCTGGCCAATATGTC 7419384
Score = 96.9 bits (106), Expect = 4e-15
Identities = 80/98 (82%), Gaps = 0/98 (0%)
Strand=Plus/Minus
Query 153894 GCATACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGGAGAGACAAAGCAACCAGT 153953
|| ||| | || ||||| ||||| || || ||||| ||| || | ||||| || |||||
Sbjct 7408638 GCCTACCGCTTGGCACTGCAGACGAGGGAACAGCACATCCGGCGGGACAAGGCCACCAGC 7408579
Query 153954 AACATCTGCACAGCTCAGGCACTGCTGGCTAATATGTC 153991
||||| |||||||||||||| |||||||| ||||||||
Sbjct 7408578 AACATTTGCACAGCTCAGGCGCTGCTGGCCAATATGTC 7408541
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 579178119633600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |