Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20pseudoobscura_20pseudoobscura_20[refseq_20GCF_5F0000017 65.3_202013-04-11] 4,790 sequences; 152,696,384 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq6 123 4e-22 seq275 118 2e-20 seq9 118 2e-20 seq4335 113 7e-19 seq10 113 7e-19 seq3 105 1e-16 seq4 87.8 3e-11 >seq6 Length=9197557 Score = 123 bits (136), Expect = 4e-22 Identities = 316/474 (67%), Gaps = 8/474 (2%) Strand=Plus/Plus Query 2411506 AAGGCAAAGATCTTGCGCTGGTCG-CGCCCGCCAAACTGGGCGTCGACGTCGAGGTGCTG 2411564 |||| |||||||||||||| ||| ||||| ||||||||||| || || | |||| | Sbjct 2100039 AAGGTGAAGATCTTGCGCTGATCGACGCCC-CCAAACTGGGCATCCACCTTTAGGTATTC 2100097 Query 2411565 CTCGTCGAGGGCCTGCATGAGCGGGTAGACGAGGTTGCTGAGCGGCGGGTTGCGGTCCAT 2411624 |||||| |||||||||| || |||| ||| |||| |||| | || Sbjct 2100098 CTCGTCCAGGGCCTGCAGTCCAGGATAGAGCAGGCCTGAGAGCAGCGGATACTCTACCTG 2100157 Query 2411625 CTTGACCACCTGGGCGGCGGCCTTTTGCGC--CGTGCCGACGGTCACGCGCGCCGTCAGG 2411682 || || |||| |||| | ||||| | || ||||| | || || || | || Sbjct 2100158 TTTAACGACCTCGGCGCCCGCCTTCTTGGCATCGTGCTGC--GTGACCACCGAGGATAGC 2100215 Query 2411683 CGCAAGAGGTCGAGCGTGTAGGCGGCGCCATGCTGGTAATCGCTGCCGCGCACAAATTCG 2411742 | | ||| || ||||| | | ||||||| |||||||| ||||| | Sbjct 2100216 TTGTACACGTCCAGAGTGTACTCCTTGGACAGCTGGTAGTCGCTGCCCTTGACAAACTTC 2100275 Query 2411743 AGACGATCCAGCGGGACGCCAATGT-GCTGGAGCATGGCCTTGATGGCAAACTCGTACCA 2411801 || |||||||| ||||| ||| ||| |||||||||||||| | |||||| | Sbjct 2100276 AGCTTCTCCAGCGGAACGCCGATGGAGCTC-AGCATGGCCTTGATCACCTGCTCGTAGTA 2100334 Query 2411802 GCGGCACCGGTGCTCGACGAGGTCCCACGGCGTCTTGCCATTGTCGAGGTGGGCGTGCAC 2411861 || || |||| | || ||| |||| || ||||| || | |||||| | Sbjct 2100335 CTGGGTGCGCAGCTCCAGCAGCGACCAGGGCGCTTTCATGTTGTCCAGATAGGCGTGGAG 2100394 Query 2411862 GTCGGCAAAGAGGATCCTCACCCGACATCCGGCCTGGAGAAAGTCGGCCAGTTTAAAGAT 2411921 |||||||| || || | ||| || ||||||| || |||||||| | || | || Sbjct 2100395 ATCGGCAAACAGAATGGTTACCTCGCAGCCGGCCTTTAGGAAGTCGGCAATCTTCGACAT 2100454 Query 2411922 GGGCACAAAGTAGCCCAGATGGGGCTTGCCCGTCGGCGCGGTGCCCCAATAAAT 2411975 |||||||||||| | | ||| ||||| ||||||| ||| || ||||| || || Sbjct 2100455 CGGCACAAAGTAGGCGACATGTGGCTTTCCCGTCGTCGCCGTTCCCCAGTAGAT 2100508 Score = 111 bits (122), Expect = 2e-18 Identities = 236/347 (68%), Gaps = 4/347 (1%) Strand=Plus/Minus Query 2019032 GGGCCCGCCCGGCACGGGCAAGACCACGAGCATCGCGTGCCTGGCGCGCGTGCTCTTGGG 2019091 ||| || || ||| ||||||||||||| ||| |||||| || ||| | || | || Sbjct 8290671 GGGTCCTCCGGGCGTTGGCAAGACCACGACCATTCAGTGCCTCGCCCGCATCCTGCTCGG 8290612 Query 2019092 CGCGGCCGCCGACGAGGCCGTGCTCGAACTCAATGCGTCAGACGAGCGCGGCGTGGACGT 2019151 | | | | ||||| ||||| || || ||||| || ||||||||||| | || || Sbjct 8290611 AGACAGCTACAAGGAGGCAGTGCTGGAGCTGAATGCCTCGAACGAGCGCGGCATCGATGT 8290552 Query 2019152 CGTGCGTAGAATCATCAAGCATCACGCTTCGAAAAGAATCGAC-CTGCCGCCCGGCCGCC 2019210 ||||| | | |||||| || | ||| | ||| || || ||||| | Sbjct 8290551 GGTGCGCAACAAGATCAAGATGTTTGCCCAGCAAAAGGT-GACGCTACCCAAGGGCCGTC 8290493 Query 2019211 ACAAGGTGATCATCCTCGATGAGGCCGACTGCCTTACGTCGGCGGCCCAGCAGGCCCTCC 2019270 ||||| | | ||||| || ||||| ||| || | ||| || ||||||||||| || | Sbjct 8290492 ACAAGATCGTTATCCTGGACGAGGCGGACAGCATGACGGAGGGCGCCCAGCAGGCGCTGC 8290433 Query 2019271 GATCG-ACCATGGAAAAGTACACCAACACGACGCGGTTTGCGCTGGCCTGCAACACGTCG 2019329 | ||| |||||||| | || | ||||||||| || || || || ||||||||||| Sbjct 8290432 G-TCGCACCATGGAGATCTATAGCAACACGACTCGCTTCGCCCTAGCCTGCAACACCAGC 8290374 Query 2019330 TCGATGGTCATCGAAGCCCTCCAGAGCCGTTGCGCCATCTTGCGCTT 2019376 || | | ||||| | | ||| || |||||||| ||||||| Sbjct 8290373 GAGAAGATTATCGAGCCGATACAGTCGCGCTGCGCCATGCTGCGCTT 8290327 >seq275 Length=24252 Score = 118 bits (130), Expect = 2e-20 Identities = 172/243 (71%), Gaps = 0/243 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||||||||| |||||||| ||||| || |||||| ||||||| || || ||| Sbjct 591 TGTACTTGGTGACAGCCTTGGTTCCCTCACTAACAGCGTGCTTGGCCAGCTCTCCCGGCA 650 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | ||||||||| || || ||||| || || || ||| || ||||||||| Sbjct 651 GCAGCAGGCGCACAGCCGTTTGGATTTCCCGACTGGTGATGGTTGAGCGCTTGTTGTAAT 710 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | |||| ||| ||||||| | ||||| |||| ||||| || ||||| ||||| Sbjct 711 GAGCCAAGCGAGACGCCTCGGCAGCAATGCGCTCGAAGATGTCATTTACAAAGCTGTTCA 770 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||||| ||| || || || ||| || || || ||||| || || |||| Sbjct 771 TGATGCTCATCGCTTTCGACGAAATACCAGTGTCAGGATGGACTTGCTTCAGAACTTTGT 830 Query 1485710 AAA 1485712 ||| Sbjct 831 AAA 833 Score = 118 bits (130), Expect = 2e-20 Identities = 172/243 (71%), Gaps = 0/243 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||||||||| |||||||| ||||| || |||||| ||||||| || || ||| Sbjct 5710 TGTACTTGGTGACAGCCTTGGTTCCCTCACTAACAGCGTGCTTGGCCAGCTCTCCCGGCA 5769 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | ||||||||| || || ||||| || || || ||| || ||||||||| Sbjct 5770 GCAGCAGGCGCACAGCCGTTTGGATTTCCCGACTGGTGATGGTTGAGCGCTTGTTGTAAT 5829 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | |||| ||| ||||||| | ||||| |||| ||||| || ||||| ||||| Sbjct 5830 GAGCCAAGCGAGACGCCTCGGCAGCAATGCGCTCGAAGATGTCATTTACAAAGCTGTTCA 5889 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||||| ||| || || || ||| || || || ||||| || || |||| Sbjct 5890 TGATGCTCATCGCTTTCGACGAAATACCAGTGTCAGGATGGACTTGCTTCAGAACTTTGT 5949 Query 1485710 AAA 1485712 ||| Sbjct 5950 AAA 5952 Score = 118 bits (130), Expect = 2e-20 Identities = 172/243 (71%), Gaps = 0/243 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||||||||| |||||||| ||||| || |||||| ||||||| || || ||| Sbjct 10869 TGTACTTGGTGACAGCCTTGGTTCCCTCACTAACAGCGTGCTTGGCCAGCTCTCCCGGCA 10928 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | ||||||||| || || ||||| || || || ||| || ||||||||| Sbjct 10929 GCAGCAGGCGCACAGCCGTTTGGATTTCCCGACTGGTGATGGTTGAGCGCTTGTTGTAAT 10988 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | |||| ||| ||||||| | ||||| |||| ||||| || ||||| ||||| Sbjct 10989 GAGCCAAGCGAGACGCCTCGGCAGCAATGCGCTCGAAGATGTCATTTACAAAGCTGTTCA 11048 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||||| ||| || || || ||| || || || ||||| || || |||| Sbjct 11049 TGATGCTCATCGCTTTCGACGAAATACCAGTGTCAGGATGGACTTGCTTCAGAACTTTGT 11108 Query 1485710 AAA 1485712 ||| Sbjct 11109 AAA 11111 Score = 118 bits (130), Expect = 2e-20 Identities = 172/243 (71%), Gaps = 0/243 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||||||||| |||||||| ||||| || |||||| ||||||| || || ||| Sbjct 16014 TGTACTTGGTGACAGCCTTGGTTCCCTCACTAACAGCGTGCTTGGCCAGCTCTCCCGGCA 16073 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | ||||||||| || || ||||| || || || ||| || ||||||||| Sbjct 16074 GCAGCAGGCGCACAGCCGTTTGGATTTCCCGACTGGTGATGGTTGAGCGCTTGTTGTAAT 16133 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | |||| ||| ||||||| | ||||| |||| ||||| || ||||| ||||| Sbjct 16134 GAGCCAAGCGAGATGCCTCGGCAGCAATGCGCTCGAAGATGTCATTTACAAAGCTGTTCA 16193 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||||| ||| || || || ||| || || || ||||| || || |||| Sbjct 16194 TGATGCTCATCGCTTTCGACGAAATACCAGTGTCAGGATGGACTTGCTTCAGAACTTTGT 16253 Query 1485710 AAA 1485712 ||| Sbjct 16254 AAA 16256 Score = 118 bits (130), Expect = 2e-20 Identities = 172/243 (71%), Gaps = 0/243 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||||||||| |||||||| ||||| || |||||| ||||||| || || ||| Sbjct 22559 TGTACTTGGTGACAGCCTTGGTTCCCTCACTAACAGCGTGCTTGGCCAGCTCTCCCGGCA 22618 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | ||||||||| || || ||||| || || || ||| || ||||||||| Sbjct 22619 GCAGCAGGCGCACAGCCGTTTGGATTTCCCGACTGGTGATGGTTGAGCGCTTGTTGTAAT 22678 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | |||| ||| ||||||| | ||||| |||| ||||| || ||||| ||||| Sbjct 22679 GAGCCAAGCGAGACGCCTCGGCAGCAATGCGCTCGAAGATGTCATTTACAAAGCTGTTCA 22738 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||||| ||| || || || ||| || || || ||||| || || |||| Sbjct 22739 TGATGCTCATCGCTTTCGACGAAATACCAGTGTCAGGATGGACTTGCTTCAGAACTTTGT 22798 Query 1485710 AAA 1485712 ||| Sbjct 22799 AAA 22801 >seq9 Length=30819483 Score = 118 bits (130), Expect = 2e-20 Identities = 172/243 (71%), Gaps = 0/243 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||||||||| |||||||| ||||| || |||||| ||||||| || || ||| Sbjct 17104583 TGTACTTGGTGACAGCCTTGGTTCCCTCACTAACAGCGTGCTTGGCCAGCTCTCCCGGCA 17104524 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | ||||||||| || || ||||| || || || ||| || ||||||||| Sbjct 17104523 GCAGCAGGCGCACAGCCGTTTGGATTTCCCGACTGGTGATGGTTGAGCGCTTGTTGTAAT 17104464 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | |||| ||| ||||||| | ||||| |||| ||||| || ||||| ||||| Sbjct 17104463 GAGCCAAGCGAGACGCCTCGGCAGCAATGCGCTCGAAGATGTCATTTACAAAGCTGTTCA 17104404 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||||| ||| || || || ||| || || || ||||| || || |||| Sbjct 17104403 TGATGCTCATCGCTTTCGACGAAATACCAGTGTCAGGATGGACTTGCTTCAGAACTTTGT 17104344 Query 1485710 AAA 1485712 ||| Sbjct 17104343 AAA 17104341 Score = 107 bits (118), Expect = 3e-17 Identities = 137/189 (72%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 2035569 AAGCGCACCGACGACATTTCGCCGTGGGACAAGGCCTTTTGCGAGGTCGACCAACCCACC 2035628 |||||||||||||||||| |||||||| | || | |||| ||||| ||| Sbjct 5509799 AAGCGCACCGACGACATTATCCCGTGGGATGCCGAATTCCTCAAGGTAGACCAGGGCACA 5509740 Query 2035629 CTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGG 2035688 ||||| ||| | || || |||||||| || || || |||||| | |||| || Sbjct 5509739 CTCTTCGAGCTAATGCTGGCCGCCAATTATCTGGATATCAAGGGTTTGCTCGTGGTGTCT 5509680 Query 2035689 TGCAAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTT 2035748 ||||||||||||||||| | || | ||| || | || ||||| || |||||||| || Sbjct 5509679 TGCAAGACCGTGGCCAATATGATGAGGGGTAAAACTCCAGAGGAAATGCGCAAGACTTTC 5509620 Query 2035749 AACATCAAG 2035757 ||||||||| Sbjct 5509619 AACATCAAG 5509611 Score = 102 bits (112), Expect = 1e-15 Identities = 136/189 (72%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 2035569 AAGCGCACCGACGACATTTCGCCGTGGGACAAGGCCTTTTGCGAGGTCGACCAACCCACC 2035628 |||||||||||||||||| |||||||| | || | |||| ||||| ||| Sbjct 5507498 AAGCGCACCGACGACATTATCCCGTGGGATGCCGAATTCCTCAAGGTAGACCAGGGCACA 5507439 Query 2035629 CTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGG 2035688 ||||| | | | || | |||||||| || || || |||||| | ||||| || Sbjct 5507438 CTCTTCGGGCTAATGCAGGCCGCCAATTATCTGGATATCAAGGGTTTGCTCGAGGTGTCT 5507379 Query 2035689 TGCAAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTT 2035748 ||||| ||||||||||| | || | | ||||| | || ||||| || |||||||| || Sbjct 5507378 TGCAATACCGTGGCCAATATGATGATGTGCAAGACTCCAGAGGAAATACGCAAGACTTTC 5507319 Query 2035749 AACATCAAG 2035757 ||||||||| Sbjct 5507318 AACATCAAG 5507310 >seq4335 Length=17130 Score = 113 bits (124), Expect = 7e-19 Identities = 140/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 2035566 GACAAGCGCACCGACGACATTTCGCCGTGGGACAAGGCCTTTTGCGAGGTCGACCAACCC 2035625 || ||||||||||||||||| |||||||| | || | | || ||||| | Sbjct 3002 GAAAAGCGCACCGACGACATCATCTCGTGGGACGCCGATTTCCTCAAAGTAGACCAGGGC 2943 Query 2035626 ACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTG 2035685 || ||||| ||| | ||||| |||||||| || || || |||||| | ||||| || Sbjct 2942 ACACTCTTCGAGCTAATCCTGGCCGCCAATTATCTAGATATCAAGGGTTTGCTCGAGCTG 2883 Query 2035686 GGGTGCAAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACC 2035745 |||||||||||||| ||| | || ||||| ||| | || ||||| || || ||||| Sbjct 2882 ACTTGCAAGACCGTGGCAAACATGATTAAGGGAAAGACTCCAGAGGAGATACGTAAGACT 2823 Query 2035746 TTTAACATCAAG 2035757 |||||||| ||| Sbjct 2822 TTTAACATTAAG 2811 Score = 107 bits (118), Expect = 3e-17 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 2035566 GACAAGCGCACCGACGACATTTCGCCGTGGGACAAGGCCTTTTGCGAGGTCGACCAACCC 2035625 || ||||||||||||||||| |||||||| | || | | || ||||| | Sbjct 9999 GAAAAGCGCACCGACGACATCATCTCGTGGGACGCCGATTTCCTCAAAGTAGACCAGGGC 9940 Query 2035626 ACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTG 2035685 || ||||| ||| | ||||| |||||||| || || || |||||| | ||||| || Sbjct 9939 ACACTCTTCGAGCTAATCCTGGCCGCCAATTATCTAGATATCAAGGGTTTGCTCGAGCTG 9880 Query 2035686 GGGTGCAAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACC 2035745 |||| ||||||||| ||| | || ||||| ||| | || ||||| || || ||||| Sbjct 9879 ACTTGCAGGACCGTGGCAAACATGATTAAGGGAAAGACTCCAGAGGAGATACGTAAGACT 9820 Query 2035746 TTTAACATCAAG 2035757 |||||||| ||| Sbjct 9819 TTTAACATTAAG 9808 >seq10 Length=19787792 Score = 113 bits (124), Expect = 7e-19 Identities = 225/330 (68%), Gaps = 9/330 (3%) Strand=Plus/Plus Query 794340 ACCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTT 794399 ||||||||| || ||||| |||||| ||| || ||||||||||| || ||||| Sbjct 12208054 ACCTTCGTCACGGGAGATCAGCTCGTTGGAGAAGGTCAGACCGGGCATGAGACCACGCTT 12208113 Query 794400 CTTGAGCCAAAAGAT---GGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGC 794456 ||| ||||||||||| |||| || ||||| || ||||| || || ||||| || Sbjct 12208114 CTTCAGCCAAAAGATCGAGGCA---AAGCTGCCACTAAAGAAGATTCCTTCCACGGCCGC 12208170 Query 794457 AAAGCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGC 794516 |||| | | | ||||||||||| || || | || | | ||||| ||| || Sbjct 12208171 AAAGGCAATAATACGCTCGGCAAAGTTGGCC--GATTTCGAGGAT-ATCCAGGACATGGC 12208227 Query 794517 CCACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTT 794576 ||| || ||||| | | || | |||| || || || || || | || ||| Sbjct 12208228 CCAGTCCGCCTTGCGCTTTACAGCCGGCATGGTCTCAATAGCATTGAACAAGTAGTCGCG 12208287 Query 794577 CTCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTT 794636 ||| ||| ||| | ||||||||| ||||| | ||| |||| ||||| | || Sbjct 12208288 CTCCTGCGGCTCCCGTATGTAGGTGTCAATGAGCACGCTGTACATCTCGGAGTGCACATT 12208347 Query 794637 TTCGATGGCGATCTGGAAGCCATAAAAGCA 794666 || ||||| ||||||||||| || ||||| Sbjct 12208348 CTCCATGGCTATCTGGAAGCCGTAGAAGCA 12208377 >seq3 Length=12541198 Score = 105 bits (116), Expect = 1e-16 Identities = 168/241 (70%), Gaps = 0/241 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||| |||||||||||||| ||||| |||||||||| ||||||| || || ||| Sbjct 10101953 TGTACTTCGTGACGGCCTTGGTTCCCTCACTGACGGCGTGCTTGGCCAGCTCTCCCGGCA 10101894 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | || ||||| || || ||||| || || | ||| ||| ||||| | Sbjct 10101893 GAAGTAGCCGCACAGCCGTTTGGATTTCCCGACTTGTGATGGTGGACTTTTTGTTGTAGT 10101834 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | ||| ||| ||| || | | | ||||| |||| || ||||| ||||| ||||| Sbjct 10101833 GACCCAAGCGAGAGGCTTCCGAGGCAATGCGCTCGAAGATATCGTTTACAAAGCTGTTCA 10101774 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||||| ||| ||||| || ||| ||||| || ||||| || || |||| Sbjct 10101773 TGATGCTCATCGCCTTGGAGGAGACACCAGTGTCCGGGTGGACTTGCTTAAGAACTTTGT 10101714 Query 1485710 A 1485710 | Sbjct 10101713 A 10101713 Score = 102 bits (112), Expect = 1e-15 Identities = 167/241 (69%), Gaps = 0/241 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||| |||||||||||||| ||||| |||||||||| ||||||| || || ||| Sbjct 10092521 TGTACTTCGTGACGGCCTTGGTTCCCTCACTGACGGCGTGCTTGGCCAGCTCTCCCGGCA 10092580 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | || ||||| || || ||||| || || | ||| ||| ||||| | Sbjct 10092581 GAAGTAGCCGCACAGCCGTTTGGATTTCCCGACTTGTGATGGTGGACTTTTTGTTGTAGT 10092640 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | ||| || ||| || | | | ||||| |||| || ||||| ||||| ||||| Sbjct 10092641 GACCCAAACGAGAGGCTTCCGAGGCAATGCGCTCGAAGATATCGTTTACAAAGCTGTTCA 10092700 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||||| ||| ||||| || ||| ||||| || ||||| || || |||| Sbjct 10092701 TGATGCTCATCGCCTTGGAGGAGACACCAGTGTCCGGGTGGACTTGCTTAAGAACTTTGT 10092760 Query 1485710 A 1485710 | Sbjct 10092761 A 10092761 >seq4 Length=9148293 Score = 87.8 bits (96), Expect = 3e-11 Identities = 138/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 429032 GTCGGGCAAGCCCACCAAGGGCGTCGTGGAGCGATTCAAGGGCAAGGAGGGCCGGATCCG 429091 ||||||||||||| |||| || || || |||||||||||||||| || ||||| Sbjct 6346612 GTCGGGCAAGCCCCTGAAGGCGATCAAGGCCCGCCTCAAGGGCAAGGAGGGTCGCATCCG 6346671 Query 429092 CGGCAATTGCATGGGCAAGCGCGTCAACTTTACGGCGCGCGCCGTCATCAGTCCCGACCC 429151 ||||| | ||||| || || || |||| | || || ||||||||| || || || Sbjct 6346672 TGGCAACTTGATGGGAAAACGTGTGGACTTCTCAGCCCGTACCGTCATCACACCGGATCC 6346731 Query 429152 CGAAATCGACATTGACGAGGTGGGCGTGCCCTATGAGATCGTCAAGACGCTCACCTTTCC 429211 | | | ||| || |||| || ||||| | ||| | | ||| || ||||| || Sbjct 6346732 CAATTTGCGCATCGATCAGGTCGGAGTGCCGCGTTCGATAGCCCAGAATCTGACCTTCCC 6346791 Query 429212 CGAGCGCGTGACGCCCTT 429229 ||||| ||||| || || Sbjct 6346792 CGAGCTGGTGACCCCATT 6346809 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7915736865852810