Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20pseudoobscura_20pseudoobscura_20[refseq_20GCF_5F0000017
65.3_202013-04-11] 4,790 sequences; 152,696,384 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq6 123 4e-22
seq275 118 2e-20
seq9 118 2e-20
seq4335 113 7e-19
seq10 113 7e-19
seq3 105 1e-16
seq4 87.8 3e-11
>seq6
Length=9197557
Score = 123 bits (136), Expect = 4e-22
Identities = 316/474 (67%), Gaps = 8/474 (2%)
Strand=Plus/Plus
Query 2411506 AAGGCAAAGATCTTGCGCTGGTCG-CGCCCGCCAAACTGGGCGTCGACGTCGAGGTGCTG 2411564
|||| |||||||||||||| ||| ||||| ||||||||||| || || | |||| |
Sbjct 2100039 AAGGTGAAGATCTTGCGCTGATCGACGCCC-CCAAACTGGGCATCCACCTTTAGGTATTC 2100097
Query 2411565 CTCGTCGAGGGCCTGCATGAGCGGGTAGACGAGGTTGCTGAGCGGCGGGTTGCGGTCCAT 2411624
|||||| |||||||||| || |||| ||| |||| |||| | ||
Sbjct 2100098 CTCGTCCAGGGCCTGCAGTCCAGGATAGAGCAGGCCTGAGAGCAGCGGATACTCTACCTG 2100157
Query 2411625 CTTGACCACCTGGGCGGCGGCCTTTTGCGC--CGTGCCGACGGTCACGCGCGCCGTCAGG 2411682
|| || |||| |||| | ||||| | || ||||| | || || || | ||
Sbjct 2100158 TTTAACGACCTCGGCGCCCGCCTTCTTGGCATCGTGCTGC--GTGACCACCGAGGATAGC 2100215
Query 2411683 CGCAAGAGGTCGAGCGTGTAGGCGGCGCCATGCTGGTAATCGCTGCCGCGCACAAATTCG 2411742
| | ||| || ||||| | | ||||||| |||||||| ||||| |
Sbjct 2100216 TTGTACACGTCCAGAGTGTACTCCTTGGACAGCTGGTAGTCGCTGCCCTTGACAAACTTC 2100275
Query 2411743 AGACGATCCAGCGGGACGCCAATGT-GCTGGAGCATGGCCTTGATGGCAAACTCGTACCA 2411801
|| |||||||| ||||| ||| ||| |||||||||||||| | |||||| |
Sbjct 2100276 AGCTTCTCCAGCGGAACGCCGATGGAGCTC-AGCATGGCCTTGATCACCTGCTCGTAGTA 2100334
Query 2411802 GCGGCACCGGTGCTCGACGAGGTCCCACGGCGTCTTGCCATTGTCGAGGTGGGCGTGCAC 2411861
|| || |||| | || ||| |||| || ||||| || | |||||| |
Sbjct 2100335 CTGGGTGCGCAGCTCCAGCAGCGACCAGGGCGCTTTCATGTTGTCCAGATAGGCGTGGAG 2100394
Query 2411862 GTCGGCAAAGAGGATCCTCACCCGACATCCGGCCTGGAGAAAGTCGGCCAGTTTAAAGAT 2411921
|||||||| || || | ||| || ||||||| || |||||||| | || | ||
Sbjct 2100395 ATCGGCAAACAGAATGGTTACCTCGCAGCCGGCCTTTAGGAAGTCGGCAATCTTCGACAT 2100454
Query 2411922 GGGCACAAAGTAGCCCAGATGGGGCTTGCCCGTCGGCGCGGTGCCCCAATAAAT 2411975
|||||||||||| | | ||| ||||| ||||||| ||| || ||||| || ||
Sbjct 2100455 CGGCACAAAGTAGGCGACATGTGGCTTTCCCGTCGTCGCCGTTCCCCAGTAGAT 2100508
Score = 111 bits (122), Expect = 2e-18
Identities = 236/347 (68%), Gaps = 4/347 (1%)
Strand=Plus/Minus
Query 2019032 GGGCCCGCCCGGCACGGGCAAGACCACGAGCATCGCGTGCCTGGCGCGCGTGCTCTTGGG 2019091
||| || || ||| ||||||||||||| ||| |||||| || ||| | || | ||
Sbjct 8290671 GGGTCCTCCGGGCGTTGGCAAGACCACGACCATTCAGTGCCTCGCCCGCATCCTGCTCGG 8290612
Query 2019092 CGCGGCCGCCGACGAGGCCGTGCTCGAACTCAATGCGTCAGACGAGCGCGGCGTGGACGT 2019151
| | | | ||||| ||||| || || ||||| || ||||||||||| | || ||
Sbjct 8290611 AGACAGCTACAAGGAGGCAGTGCTGGAGCTGAATGCCTCGAACGAGCGCGGCATCGATGT 8290552
Query 2019152 CGTGCGTAGAATCATCAAGCATCACGCTTCGAAAAGAATCGAC-CTGCCGCCCGGCCGCC 2019210
||||| | | |||||| || | ||| | ||| || || ||||| |
Sbjct 8290551 GGTGCGCAACAAGATCAAGATGTTTGCCCAGCAAAAGGT-GACGCTACCCAAGGGCCGTC 8290493
Query 2019211 ACAAGGTGATCATCCTCGATGAGGCCGACTGCCTTACGTCGGCGGCCCAGCAGGCCCTCC 2019270
||||| | | ||||| || ||||| ||| || | ||| || ||||||||||| || |
Sbjct 8290492 ACAAGATCGTTATCCTGGACGAGGCGGACAGCATGACGGAGGGCGCCCAGCAGGCGCTGC 8290433
Query 2019271 GATCG-ACCATGGAAAAGTACACCAACACGACGCGGTTTGCGCTGGCCTGCAACACGTCG 2019329
| ||| |||||||| | || | ||||||||| || || || || |||||||||||
Sbjct 8290432 G-TCGCACCATGGAGATCTATAGCAACACGACTCGCTTCGCCCTAGCCTGCAACACCAGC 8290374
Query 2019330 TCGATGGTCATCGAAGCCCTCCAGAGCCGTTGCGCCATCTTGCGCTT 2019376
|| | | ||||| | | ||| || |||||||| |||||||
Sbjct 8290373 GAGAAGATTATCGAGCCGATACAGTCGCGCTGCGCCATGCTGCGCTT 8290327
>seq275
Length=24252
Score = 118 bits (130), Expect = 2e-20
Identities = 172/243 (71%), Gaps = 0/243 (0%)
Strand=Plus/Plus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
||||||||||||| |||||||| ||||| || |||||| ||||||| || || |||
Sbjct 591 TGTACTTGGTGACAGCCTTGGTTCCCTCACTAACAGCGTGCTTGGCCAGCTCTCCCGGCA 650
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
| ||||||||| || || ||||| || || || ||| || |||||||||
Sbjct 651 GCAGCAGGCGCACAGCCGTTTGGATTTCCCGACTGGTGATGGTTGAGCGCTTGTTGTAAT 710
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
| |||| ||| ||||||| | ||||| |||| ||||| || ||||| |||||
Sbjct 711 GAGCCAAGCGAGACGCCTCGGCAGCAATGCGCTCGAAGATGTCATTTACAAAGCTGTTCA 770
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709
|||| ||||| ||| || || || ||| || || || ||||| || || ||||
Sbjct 771 TGATGCTCATCGCTTTCGACGAAATACCAGTGTCAGGATGGACTTGCTTCAGAACTTTGT 830
Query 1485710 AAA 1485712
|||
Sbjct 831 AAA 833
Score = 118 bits (130), Expect = 2e-20
Identities = 172/243 (71%), Gaps = 0/243 (0%)
Strand=Plus/Plus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
||||||||||||| |||||||| ||||| || |||||| ||||||| || || |||
Sbjct 5710 TGTACTTGGTGACAGCCTTGGTTCCCTCACTAACAGCGTGCTTGGCCAGCTCTCCCGGCA 5769
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
| ||||||||| || || ||||| || || || ||| || |||||||||
Sbjct 5770 GCAGCAGGCGCACAGCCGTTTGGATTTCCCGACTGGTGATGGTTGAGCGCTTGTTGTAAT 5829
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
| |||| ||| ||||||| | ||||| |||| ||||| || ||||| |||||
Sbjct 5830 GAGCCAAGCGAGACGCCTCGGCAGCAATGCGCTCGAAGATGTCATTTACAAAGCTGTTCA 5889
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709
|||| ||||| ||| || || || ||| || || || ||||| || || ||||
Sbjct 5890 TGATGCTCATCGCTTTCGACGAAATACCAGTGTCAGGATGGACTTGCTTCAGAACTTTGT 5949
Query 1485710 AAA 1485712
|||
Sbjct 5950 AAA 5952
Score = 118 bits (130), Expect = 2e-20
Identities = 172/243 (71%), Gaps = 0/243 (0%)
Strand=Plus/Plus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
||||||||||||| |||||||| ||||| || |||||| ||||||| || || |||
Sbjct 10869 TGTACTTGGTGACAGCCTTGGTTCCCTCACTAACAGCGTGCTTGGCCAGCTCTCCCGGCA 10928
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
| ||||||||| || || ||||| || || || ||| || |||||||||
Sbjct 10929 GCAGCAGGCGCACAGCCGTTTGGATTTCCCGACTGGTGATGGTTGAGCGCTTGTTGTAAT 10988
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
| |||| ||| ||||||| | ||||| |||| ||||| || ||||| |||||
Sbjct 10989 GAGCCAAGCGAGACGCCTCGGCAGCAATGCGCTCGAAGATGTCATTTACAAAGCTGTTCA 11048
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709
|||| ||||| ||| || || || ||| || || || ||||| || || ||||
Sbjct 11049 TGATGCTCATCGCTTTCGACGAAATACCAGTGTCAGGATGGACTTGCTTCAGAACTTTGT 11108
Query 1485710 AAA 1485712
|||
Sbjct 11109 AAA 11111
Score = 118 bits (130), Expect = 2e-20
Identities = 172/243 (71%), Gaps = 0/243 (0%)
Strand=Plus/Plus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
||||||||||||| |||||||| ||||| || |||||| ||||||| || || |||
Sbjct 16014 TGTACTTGGTGACAGCCTTGGTTCCCTCACTAACAGCGTGCTTGGCCAGCTCTCCCGGCA 16073
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
| ||||||||| || || ||||| || || || ||| || |||||||||
Sbjct 16074 GCAGCAGGCGCACAGCCGTTTGGATTTCCCGACTGGTGATGGTTGAGCGCTTGTTGTAAT 16133
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
| |||| ||| ||||||| | ||||| |||| ||||| || ||||| |||||
Sbjct 16134 GAGCCAAGCGAGATGCCTCGGCAGCAATGCGCTCGAAGATGTCATTTACAAAGCTGTTCA 16193
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709
|||| ||||| ||| || || || ||| || || || ||||| || || ||||
Sbjct 16194 TGATGCTCATCGCTTTCGACGAAATACCAGTGTCAGGATGGACTTGCTTCAGAACTTTGT 16253
Query 1485710 AAA 1485712
|||
Sbjct 16254 AAA 16256
Score = 118 bits (130), Expect = 2e-20
Identities = 172/243 (71%), Gaps = 0/243 (0%)
Strand=Plus/Plus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
||||||||||||| |||||||| ||||| || |||||| ||||||| || || |||
Sbjct 22559 TGTACTTGGTGACAGCCTTGGTTCCCTCACTAACAGCGTGCTTGGCCAGCTCTCCCGGCA 22618
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
| ||||||||| || || ||||| || || || ||| || |||||||||
Sbjct 22619 GCAGCAGGCGCACAGCCGTTTGGATTTCCCGACTGGTGATGGTTGAGCGCTTGTTGTAAT 22678
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
| |||| ||| ||||||| | ||||| |||| ||||| || ||||| |||||
Sbjct 22679 GAGCCAAGCGAGACGCCTCGGCAGCAATGCGCTCGAAGATGTCATTTACAAAGCTGTTCA 22738
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709
|||| ||||| ||| || || || ||| || || || ||||| || || ||||
Sbjct 22739 TGATGCTCATCGCTTTCGACGAAATACCAGTGTCAGGATGGACTTGCTTCAGAACTTTGT 22798
Query 1485710 AAA 1485712
|||
Sbjct 22799 AAA 22801
>seq9
Length=30819483
Score = 118 bits (130), Expect = 2e-20
Identities = 172/243 (71%), Gaps = 0/243 (0%)
Strand=Plus/Minus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
||||||||||||| |||||||| ||||| || |||||| ||||||| || || |||
Sbjct 17104583 TGTACTTGGTGACAGCCTTGGTTCCCTCACTAACAGCGTGCTTGGCCAGCTCTCCCGGCA 17104524
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
| ||||||||| || || ||||| || || || ||| || |||||||||
Sbjct 17104523 GCAGCAGGCGCACAGCCGTTTGGATTTCCCGACTGGTGATGGTTGAGCGCTTGTTGTAAT 17104464
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
| |||| ||| ||||||| | ||||| |||| ||||| || ||||| |||||
Sbjct 17104463 GAGCCAAGCGAGACGCCTCGGCAGCAATGCGCTCGAAGATGTCATTTACAAAGCTGTTCA 17104404
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709
|||| ||||| ||| || || || ||| || || || ||||| || || ||||
Sbjct 17104403 TGATGCTCATCGCTTTCGACGAAATACCAGTGTCAGGATGGACTTGCTTCAGAACTTTGT 17104344
Query 1485710 AAA 1485712
|||
Sbjct 17104343 AAA 17104341
Score = 107 bits (118), Expect = 3e-17
Identities = 137/189 (72%), Gaps = 0/189 (0%)
Strand=Plus/Minus
Query 2035569 AAGCGCACCGACGACATTTCGCCGTGGGACAAGGCCTTTTGCGAGGTCGACCAACCCACC 2035628
|||||||||||||||||| |||||||| | || | |||| ||||| |||
Sbjct 5509799 AAGCGCACCGACGACATTATCCCGTGGGATGCCGAATTCCTCAAGGTAGACCAGGGCACA 5509740
Query 2035629 CTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGG 2035688
||||| ||| | || || |||||||| || || || |||||| | |||| ||
Sbjct 5509739 CTCTTCGAGCTAATGCTGGCCGCCAATTATCTGGATATCAAGGGTTTGCTCGTGGTGTCT 5509680
Query 2035689 TGCAAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTT 2035748
||||||||||||||||| | || | ||| || | || ||||| || |||||||| ||
Sbjct 5509679 TGCAAGACCGTGGCCAATATGATGAGGGGTAAAACTCCAGAGGAAATGCGCAAGACTTTC 5509620
Query 2035749 AACATCAAG 2035757
|||||||||
Sbjct 5509619 AACATCAAG 5509611
Score = 102 bits (112), Expect = 1e-15
Identities = 136/189 (72%), Gaps = 0/189 (0%)
Strand=Plus/Minus
Query 2035569 AAGCGCACCGACGACATTTCGCCGTGGGACAAGGCCTTTTGCGAGGTCGACCAACCCACC 2035628
|||||||||||||||||| |||||||| | || | |||| ||||| |||
Sbjct 5507498 AAGCGCACCGACGACATTATCCCGTGGGATGCCGAATTCCTCAAGGTAGACCAGGGCACA 5507439
Query 2035629 CTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGG 2035688
||||| | | | || | |||||||| || || || |||||| | ||||| ||
Sbjct 5507438 CTCTTCGGGCTAATGCAGGCCGCCAATTATCTGGATATCAAGGGTTTGCTCGAGGTGTCT 5507379
Query 2035689 TGCAAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTT 2035748
||||| ||||||||||| | || | | ||||| | || ||||| || |||||||| ||
Sbjct 5507378 TGCAATACCGTGGCCAATATGATGATGTGCAAGACTCCAGAGGAAATACGCAAGACTTTC 5507319
Query 2035749 AACATCAAG 2035757
|||||||||
Sbjct 5507318 AACATCAAG 5507310
>seq4335
Length=17130
Score = 113 bits (124), Expect = 7e-19
Identities = 140/192 (73%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 2035566 GACAAGCGCACCGACGACATTTCGCCGTGGGACAAGGCCTTTTGCGAGGTCGACCAACCC 2035625
|| ||||||||||||||||| |||||||| | || | | || ||||| |
Sbjct 3002 GAAAAGCGCACCGACGACATCATCTCGTGGGACGCCGATTTCCTCAAAGTAGACCAGGGC 2943
Query 2035626 ACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTG 2035685
|| ||||| ||| | ||||| |||||||| || || || |||||| | ||||| ||
Sbjct 2942 ACACTCTTCGAGCTAATCCTGGCCGCCAATTATCTAGATATCAAGGGTTTGCTCGAGCTG 2883
Query 2035686 GGGTGCAAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACC 2035745
|||||||||||||| ||| | || ||||| ||| | || ||||| || || |||||
Sbjct 2882 ACTTGCAAGACCGTGGCAAACATGATTAAGGGAAAGACTCCAGAGGAGATACGTAAGACT 2823
Query 2035746 TTTAACATCAAG 2035757
|||||||| |||
Sbjct 2822 TTTAACATTAAG 2811
Score = 107 bits (118), Expect = 3e-17
Identities = 139/192 (72%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 2035566 GACAAGCGCACCGACGACATTTCGCCGTGGGACAAGGCCTTTTGCGAGGTCGACCAACCC 2035625
|| ||||||||||||||||| |||||||| | || | | || ||||| |
Sbjct 9999 GAAAAGCGCACCGACGACATCATCTCGTGGGACGCCGATTTCCTCAAAGTAGACCAGGGC 9940
Query 2035626 ACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTG 2035685
|| ||||| ||| | ||||| |||||||| || || || |||||| | ||||| ||
Sbjct 9939 ACACTCTTCGAGCTAATCCTGGCCGCCAATTATCTAGATATCAAGGGTTTGCTCGAGCTG 9880
Query 2035686 GGGTGCAAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACC 2035745
|||| ||||||||| ||| | || ||||| ||| | || ||||| || || |||||
Sbjct 9879 ACTTGCAGGACCGTGGCAAACATGATTAAGGGAAAGACTCCAGAGGAGATACGTAAGACT 9820
Query 2035746 TTTAACATCAAG 2035757
|||||||| |||
Sbjct 9819 TTTAACATTAAG 9808
>seq10
Length=19787792
Score = 113 bits (124), Expect = 7e-19
Identities = 225/330 (68%), Gaps = 9/330 (3%)
Strand=Plus/Plus
Query 794340 ACCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTT 794399
||||||||| || ||||| |||||| ||| || ||||||||||| || |||||
Sbjct 12208054 ACCTTCGTCACGGGAGATCAGCTCGTTGGAGAAGGTCAGACCGGGCATGAGACCACGCTT 12208113
Query 794400 CTTGAGCCAAAAGAT---GGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGC 794456
||| ||||||||||| |||| || ||||| || ||||| || || ||||| ||
Sbjct 12208114 CTTCAGCCAAAAGATCGAGGCA---AAGCTGCCACTAAAGAAGATTCCTTCCACGGCCGC 12208170
Query 794457 AAAGCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGC 794516
|||| | | | ||||||||||| || || | || | | ||||| ||| ||
Sbjct 12208171 AAAGGCAATAATACGCTCGGCAAAGTTGGCC--GATTTCGAGGAT-ATCCAGGACATGGC 12208227
Query 794517 CCACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTT 794576
||| || ||||| | | || | |||| || || || || || | || |||
Sbjct 12208228 CCAGTCCGCCTTGCGCTTTACAGCCGGCATGGTCTCAATAGCATTGAACAAGTAGTCGCG 12208287
Query 794577 CTCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTT 794636
||| ||| ||| | ||||||||| ||||| | ||| |||| ||||| | ||
Sbjct 12208288 CTCCTGCGGCTCCCGTATGTAGGTGTCAATGAGCACGCTGTACATCTCGGAGTGCACATT 12208347
Query 794637 TTCGATGGCGATCTGGAAGCCATAAAAGCA 794666
|| ||||| ||||||||||| || |||||
Sbjct 12208348 CTCCATGGCTATCTGGAAGCCGTAGAAGCA 12208377
>seq3
Length=12541198
Score = 105 bits (116), Expect = 1e-16
Identities = 168/241 (70%), Gaps = 0/241 (0%)
Strand=Plus/Minus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
||||||| |||||||||||||| ||||| |||||||||| ||||||| || || |||
Sbjct 10101953 TGTACTTCGTGACGGCCTTGGTTCCCTCACTGACGGCGTGCTTGGCCAGCTCTCCCGGCA 10101894
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
| || ||||| || || ||||| || || | ||| ||| ||||| |
Sbjct 10101893 GAAGTAGCCGCACAGCCGTTTGGATTTCCCGACTTGTGATGGTGGACTTTTTGTTGTAGT 10101834
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
| ||| ||| ||| || | | | ||||| |||| || ||||| ||||| |||||
Sbjct 10101833 GACCCAAGCGAGAGGCTTCCGAGGCAATGCGCTCGAAGATATCGTTTACAAAGCTGTTCA 10101774
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709
|||| ||||| ||| ||||| || ||| ||||| || ||||| || || ||||
Sbjct 10101773 TGATGCTCATCGCCTTGGAGGAGACACCAGTGTCCGGGTGGACTTGCTTAAGAACTTTGT 10101714
Query 1485710 A 1485710
|
Sbjct 10101713 A 10101713
Score = 102 bits (112), Expect = 1e-15
Identities = 167/241 (69%), Gaps = 0/241 (0%)
Strand=Plus/Plus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
||||||| |||||||||||||| ||||| |||||||||| ||||||| || || |||
Sbjct 10092521 TGTACTTCGTGACGGCCTTGGTTCCCTCACTGACGGCGTGCTTGGCCAGCTCTCCCGGCA 10092580
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
| || ||||| || || ||||| || || | ||| ||| ||||| |
Sbjct 10092581 GAAGTAGCCGCACAGCCGTTTGGATTTCCCGACTTGTGATGGTGGACTTTTTGTTGTAGT 10092640
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
| ||| || ||| || | | | ||||| |||| || ||||| ||||| |||||
Sbjct 10092641 GACCCAAACGAGAGGCTTCCGAGGCAATGCGCTCGAAGATATCGTTTACAAAGCTGTTCA 10092700
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709
|||| ||||| ||| ||||| || ||| ||||| || ||||| || || ||||
Sbjct 10092701 TGATGCTCATCGCCTTGGAGGAGACACCAGTGTCCGGGTGGACTTGCTTAAGAACTTTGT 10092760
Query 1485710 A 1485710
|
Sbjct 10092761 A 10092761
>seq4
Length=9148293
Score = 87.8 bits (96), Expect = 3e-11
Identities = 138/198 (70%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 429032 GTCGGGCAAGCCCACCAAGGGCGTCGTGGAGCGATTCAAGGGCAAGGAGGGCCGGATCCG 429091
||||||||||||| |||| || || || |||||||||||||||| || |||||
Sbjct 6346612 GTCGGGCAAGCCCCTGAAGGCGATCAAGGCCCGCCTCAAGGGCAAGGAGGGTCGCATCCG 6346671
Query 429092 CGGCAATTGCATGGGCAAGCGCGTCAACTTTACGGCGCGCGCCGTCATCAGTCCCGACCC 429151
||||| | ||||| || || || |||| | || || ||||||||| || || ||
Sbjct 6346672 TGGCAACTTGATGGGAAAACGTGTGGACTTCTCAGCCCGTACCGTCATCACACCGGATCC 6346731
Query 429152 CGAAATCGACATTGACGAGGTGGGCGTGCCCTATGAGATCGTCAAGACGCTCACCTTTCC 429211
| | | ||| || |||| || ||||| | ||| | | ||| || ||||| ||
Sbjct 6346732 CAATTTGCGCATCGATCAGGTCGGAGTGCCGCGTTCGATAGCCCAGAATCTGACCTTCCC 6346791
Query 429212 CGAGCGCGTGACGCCCTT 429229
||||| ||||| || ||
Sbjct 6346792 CGAGCTGGTGACCCCATT 6346809
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7915736865852810
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