Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20pseudoobscura_20pseudoobscura_20[refseq_20GCF_5F0000017 65.3_202013-04-11] 4,790 sequences; 152,696,384 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq12 129 4e-25 seq4631 123 2e-23 seq6 122 6e-23 seq3 116 2e-21 >seq12 Length=1235759 Score = 129 bits (142), Expect = 4e-25 Identities = 158/214 (74%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||| | ||| ||||||||| ||||| ||||| || || |||| |||| Sbjct 219379 AGCACCAAGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGGCCATCC 219320 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||| ||||| |||||||||||||| || ||||| ||| | || | ||||||||||| Sbjct 219319 TCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGGGGAATGCCCTCCTTGTCC 219260 Query 34886 TTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGG 34943 | || || ||||| || || || | ||| || |||||| || | ||| |||| Sbjct 219259 TGGATCTTAGCCTTGAC--ATTCTCGATGGTGTCAGAGGGCTCGACCTCCAAGGTGATGG 219202 Query 34944 TCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||| || ||||| || || || ||||| ||||| Sbjct 219201 TCTTGCCAGTGAGAGTTTTCACGAAGATTTGCAT 219168 >seq4631 Length=7852 Score = 123 bits (136), Expect = 2e-23 Identities = 143/193 (74%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 |||||||||||||||||| || || || | || |||| |||| |||||| || ||||| Sbjct 680 CTCCTTCTGAATGTTATAATCAGACAGTGTTCGGCCATCTTCCAATTGCTTGCCAGCGAA 621 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||||| || || || ||| | || | || || ||||| | || || |||||| Sbjct 620 GATCAAACGCTGTTGATCTGGAGGAATTCCTTCTTTGTCCTGGATCTTGGCTTTGACATT 561 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | | || | || | ||||| |||| ||||||||||| ||||| ||||||||||| Sbjct 560 TTCGATGGTATCCGACGGTTCGACCTCAAGAGTTATGGTCTTGCCCGTTAGGGTCTTTAC 501 Query 34966 AAAGATCTGCATG 34978 ||||||||||||| Sbjct 500 AAAGATCTGCATG 488 >seq6 Length=9197557 Score = 122 bits (134), Expect = 6e-23 Identities = 142/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||| ||||| |||||||| || |||| |||| ||||||||||| |||||||| Sbjct 544170 CTCCTTCTGGATGTTGTAGTCCGAAAGAGTGCGGCCATCCTCCAGTTGCTTGCCGGCGAA 544229 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||| || || ||||||||| | || | ||||||||||| | || || || ||| Sbjct 544230 GATGAGACGCTGCTGGTCTGGGGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTCACGTT 544289 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | || | || | ||| || || | ||| ||||| ||||| || | ||| || || Sbjct 544290 CTCAATGGTGTCGGATGGCTCCACCTCCAGGGTGATGGTTTTTCCAGTCAAGGTTTTCAC 544349 Query 34966 AAAGATCTGCAT 34977 |||||||||||| Sbjct 544350 AAAGATCTGCAT 544361 Score = 116 bits (128), Expect = 2e-21 Identities = 141/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||| ||||| |||||||| || |||| |||| ||||| |||||||||||||| Sbjct 543030 CTCCTTCTGGATGTTGTAGTCCGAAAGAGTGCGGCCATCCTCCAGCTGCTTTCCGGCGAA 543089 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||| || || ||||||||| | || | ||||||||||| | || || || ||| Sbjct 543090 GATGAGACGCTGCTGGTCTGGGGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTCACGTT 543149 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | || | || | ||| || || | ||| ||||| ||||| || | ||| || || Sbjct 543150 CTCAATGGTGTCGGATGGCTCCACCTCCAGGGTGATGGTTTTTCCGGTCAAGGTTTTCAC 543209 Query 34966 AAAGATCTGCAT 34977 |||||| ||||| Sbjct 543210 AAAGATTTGCAT 543221 Score = 113 bits (124), Expect = 3e-20 Identities = 140/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||| ||||| |||||||| || |||| |||| ||||| ||||| |||||||| Sbjct 543486 CTCCTTCTGGATGTTGTAGTCCGAAAGAGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAA 543545 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||| || || |||||||| | || | ||||||||||| | || || || ||| Sbjct 543546 GATGAGACGCTGCTGGTCAGGGGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTCACGTT 543605 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | || | || | ||| || || | ||| ||||| ||||| || || ||||| || Sbjct 543606 CTCAATGGTGTCGGATGGCTCCACCTCCAGGGTGATGGTTTTTCCAGTCAGAGTCTTCAC 543665 Query 34966 AAAGATCTGCAT 34977 ||||||||||| Sbjct 543666 GAAGATCTGCAT 543677 Score = 107 bits (118), Expect = 1e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||| ||||| |||||||| || |||| |||| ||||| ||||| || ||||| Sbjct 542346 CTCCTTCTGGATGTTGTAGTCCGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCAGCGAA 542405 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||| || || ||||||||| | || | ||||||||||| | || || ||| ||| Sbjct 542406 GATGAGACGCTGCTGGTCTGGGGGGATTCCCTCCTTGTCCTGAATCTTGGCTTTCACGTT 542465 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | || | ||| | ||||| || | ||| || || ||||| || || ||||| || Sbjct 542466 CTCAATGGTGTCAGAAGGTTCGACCTCCAGGGTAATAGTTTTTCCAGTCAGAGTCTTCAC 542525 Query 34966 AAAGATCTGCAT 34977 || || ||||| Sbjct 542526 GAAAATTTGCAT 542537 Score = 107 bits (118), Expect = 1e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||| ||||| |||||||| || |||| |||| ||||| ||||| |||||||| Sbjct 542574 CTCCTTCTGGATGTTGTAGTCCGAAAGAGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAA 542633 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||| || || |||||||| | || | ||||||||||| | || || || ||| Sbjct 542634 GATGAGACGCTGCTGGTCAGGGGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTCACGTT 542693 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | || | || | ||| || || | ||| ||||| ||||| || | ||| || || Sbjct 542694 CTCAATGGTGTCGGATGGCTCCACCTCCAGGGTGATGGTTTTTCCGGTCAAGGTTTTCAC 542753 Query 34966 AAAGATCTGCAT 34977 |||||| ||||| Sbjct 542754 AAAGATTTGCAT 542765 Score = 107 bits (118), Expect = 1e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||| ||||| |||||||| || |||| |||| ||||| ||||| |||||||| Sbjct 542802 CTCCTTCTGGATGTTGTAGTCCGAAAGAGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAA 542861 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||| || || ||||||||| | || | ||||||||||| | || || || ||| Sbjct 542862 GATGAGACGCTGCTGGTCTGGGGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTCACGTT 542921 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | || | || | ||| || || | ||| ||||| ||||| || | ||| || || Sbjct 542922 CTCAATGGTGTCGGATGGCTCCACCTCCAGGGTGATGGTTTTTCCGGTCAAGGTTTTCAC 542981 Query 34966 AAAGATCTGCAT 34977 ||| || ||||| Sbjct 542982 AAAAATTTGCAT 542993 Score = 107 bits (118), Expect = 1e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||| ||||| |||||||| || |||| |||| ||||| ||||| |||||||| Sbjct 543714 CTCCTTCTGGATGTTGTAGTCCGAAAGAGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAA 543773 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||| || || |||||||| | || | ||||||||||| | || || || ||| Sbjct 543774 GATGAGACGCTGCTGGTCAGGGGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTCACGTT 543833 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | || | || | ||| || || | ||| ||||| ||||| || | ||| || || Sbjct 543834 CTCAATGGTGTCGGATGGCTCCACCTCCAGGGTGATGGTTTTTCCGGTCAAGGTTTTCAC 543893 Query 34966 AAAGATCTGCAT 34977 |||||| ||||| Sbjct 543894 AAAGATTTGCAT 543905 Score = 107 bits (118), Expect = 1e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||| ||||| ||||| || || |||| |||| ||||| ||||| |||||||| Sbjct 543942 CTCCTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAA 544001 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||| || || ||||||||| | || | ||||||||||| | || || || ||| Sbjct 544002 GATGAGACGCTGCTGGTCTGGAGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTTACGTT 544061 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | || | || | ||| || || | ||| ||||| ||||| || | ||| || || Sbjct 544062 CTCAATGGTGTCGGATGGCTCCACCTCCAGGGTGATGGTTTTTCCGGTCAAGGTTTTCAC 544121 Query 34966 AAAGATCTGCAT 34977 |||||| ||||| Sbjct 544122 AAAGATTTGCAT 544133 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||| ||||| |||||||| || |||| |||| ||||| ||||| |||||||| Sbjct 543258 CTCCTTCTGGATGTTGTAGTCCGAAAGAGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAA 543317 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||| || || |||||||| | || | ||||||||||| | || || || ||| Sbjct 543318 GATGAGACGCTGCTGGTCAGGGGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTCACGTT 543377 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | || | || | ||| || || | ||| ||||| ||||| || | ||| || || Sbjct 543378 CTCAATGGTGTCGGATGGCTCCACCTCCAGGGTGATGGTTTTTCCGGTCAAGGTTTTCAC 543437 Query 34966 AAAGATCTGCAT 34977 ||| || ||||| Sbjct 543438 AAAAATTTGCAT 543449 >seq3 Length=12541198 Score = 116 bits (128), Expect = 2e-21 Identities = 156/215 (73%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| || | |||| ||||||||| ||||| ||||| || | | || | || Sbjct 3175008 AGCACCAAATGCAAGGTGGACTCCTTCTGGATGTTGTAGTCGGACAAAGTACGTCCGTCC 3174949 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||| ||||| ||||||||||||| || ||||| ||| | || | ||||||||||| Sbjct 3174948 TCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGGGAATGCCCTCCTTGTCC 3174889 Query 34886 TTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGG 34943 | || || ||||| || || || | || || |||||| || | ||| |||| Sbjct 3174888 TGGATCTTAGCCTTGAC--ATTCTCGATGGTGTCCGAGGGCTCGACCTCGAGGGTGATGG 3174831 Query 34944 TCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 |||| || || || ||||| ||||||||||||||| Sbjct 3174830 TCTTGCCAGTCAGAGTCTTGACAAAGATCTGCATG 3174796 Score = 116 bits (128), Expect = 2e-21 Identities = 156/215 (73%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||| | ||| ||||||||| ||||| ||||| || | | || | || Sbjct 3175236 AGCACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAAAGTACGTCCGTCC 3175177 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||| ||||| ||||||||||||| || ||||| ||| | || | ||||||||||| Sbjct 3175176 TCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGGGAATGCCCTCCTTGTCC 3175117 Query 34886 TTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGG 34943 | || || ||||| || || || | || || |||||| || | ||| |||| Sbjct 3175116 TGGATCTTAGCCTTGAC--ATTCTCGATGGTGTCCGAGGGCTCGACCTCGAGGGTGATGG 3175059 Query 34944 TCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 |||| || || || ||||| ||||||||||||||| Sbjct 3175058 TCTTGCCAGTCAGAGTCTTGACAAAGATCTGCATG 3175024 Score = 116 bits (128), Expect = 2e-21 Identities = 156/215 (73%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| || | |||| ||||||||| ||||| ||||| || | | || | || Sbjct 3175692 AGCACCAAATGCAAGGTGGACTCCTTCTGGATGTTGTAGTCGGACAAAGTACGTCCGTCC 3175633 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||| ||||| ||||||||||||| || ||||| ||| | || | ||||||||||| Sbjct 3175632 TCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGGGAATGCCCTCCTTGTCC 3175573 Query 34886 TTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGG 34943 | || || ||||| || || || | || || |||||| || | ||| |||| Sbjct 3175572 TGGATCTTAGCCTTGAC--ATTCTCGATGGTGTCCGAGGGCTCGACCTCGAGGGTGATGG 3175515 Query 34944 TCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 |||| || || || ||||| ||||||||||||||| Sbjct 3175514 TCTTGCCAGTCAGAGTCTTGACAAAGATCTGCATG 3175480 Score = 113 bits (124), Expect = 3e-20 Identities = 155/215 (72%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| || | |||| ||||||||| ||||| ||||| || | | || | || Sbjct 3174324 AGCACCAAATGCAAGGTGGACTCCTTCTGGATGTTGTAGTCGGACAAAGTACGTCCGTCC 3174265 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||| ||||| ||||||||||||| || ||||| ||| | || | ||||||||||| Sbjct 3174264 TCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGGGAATGCCCTCCTTGTCC 3174205 Query 34886 TTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGG 34943 | || || ||||| || || || | || || |||||| || | ||| || | Sbjct 3174204 TGGATCTTAGCCTTGAC--ATTCTCGATGGTGTCCGAGGGCTCGACCTCGAGGGTGATAG 3174147 Query 34944 TCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 |||| || || || ||||| ||||||||||||||| Sbjct 3174146 TCTTGCCAGTCAGAGTCTTGACAAAGATCTGCATG 3174112 Score = 113 bits (124), Expect = 3e-20 Identities = 155/215 (72%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| || | |||| ||||||||| ||||| || || || | | || | || Sbjct 3174552 AGCACCAAATGCAAGGTGGACTCCTTCTGGATGTTGTAATCGGACAAAGTACGTCCGTCC 3174493 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||| ||||| ||||||||||||| || ||||| ||| | || | ||||||||||| Sbjct 3174492 TCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGGGAATGCCCTCCTTGTCC 3174433 Query 34886 TTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGG 34943 | || || ||||| || || || | || || |||||| || | ||| |||| Sbjct 3174432 TGGATCTTAGCCTTGAC--ATTCTCGATGGTGTCCGAGGGCTCGACCTCGAGGGTGATGG 3174375 Query 34944 TCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 |||| || || || ||||| ||||||||||||||| Sbjct 3174374 TCTTGCCAGTCAGAGTCTTGACAAAGATCTGCATG 3174340 Score = 113 bits (124), Expect = 3e-20 Identities = 155/215 (72%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| || | |||| ||||||||| ||||| || || || | | || | || Sbjct 3174780 AGCACCAAATGCAAGGTGGACTCCTTCTGGATGTTGTAATCGGACAAAGTACGTCCGTCC 3174721 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||| ||||| ||||||||||||| || ||||| ||| | || | ||||||||||| Sbjct 3174720 TCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGGGAATGCCCTCCTTGTCC 3174661 Query 34886 TTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGG 34943 | || || ||||| || || || | || || |||||| || | ||| |||| Sbjct 3174660 TGGATCTTAGCCTTGAC--ATTCTCGATGGTGTCCGAGGGCTCGACCTCGAGGGTGATGG 3174603 Query 34944 TCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 |||| || || || ||||| ||||||||||||||| Sbjct 3174602 TCTTGCCAGTCAGAGTCTTGACAAAGATCTGCATG 3174568 Score = 111 bits (122), Expect = 1e-19 Identities = 154/214 (72%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| || | |||| ||||||||| ||||| || || || | | | || | || Sbjct 3174096 AGCACCAAATGCAAGGTGGACTCCTTCTGGATGTTGTAATCGGACAAGGTACGTCCGTCC 3174037 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||| ||||| ||||||||||||| || ||||| ||| | || | ||||||||||| Sbjct 3174036 TCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGGGAATGCCCTCCTTGTCC 3173977 Query 34886 TTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGG 34943 | || || ||||| || || || | || || ||| || || | ||| |||| Sbjct 3173976 TGGATCTTGGCCTTGAC--ATTCTCGATGGTGTCCGAGGGCTCAACCTCGAGGGTGATGG 3173919 Query 34944 TCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||| || || |||||||| || ||||||||||| Sbjct 3173918 TCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 3173885 Score = 111 bits (122), Expect = 1e-19 Identities = 153/212 (72%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 34769 ACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCC 34828 |||| ||| | ||| ||||||||| ||||| || || || | | || | || ||| Sbjct 3175917 ACCAAGTGCAAAGTGGACTCCTTCTGGATGTTGTAATCGGACAAAGTACGTCCGTCCTCC 3175858 Query 34829 AGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTT 34888 || ||||| ||||||||||||| || ||||| ||| | || | ||||||||||| | Sbjct 3175857 AGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGGGAATGCCCTCCTTGTCCTGG 3175798 Query 34889 ATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGGTCT 34946 || || ||||| || || || | || || |||||| || | ||| ||||||| Sbjct 3175797 ATCTTAGCCTTGAC--ATTCTCGATGGTGTCCGAGGGCTCGACCTCGAGGGTGATGGTCT 3175740 Query 34947 TTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 | || || || ||||| ||||||||||||||| Sbjct 3175739 TGCCAGTCAGAGTCTTGACAAAGATCTGCATG 3175708 Score = 107 bits (118), Expect = 1e-18 Identities = 154/215 (72%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| || | |||| ||||||||| ||||| || || || | | || | || Sbjct 3175464 AGCACCAAATGCAAGGTGGACTCCTTCTGGATGTTGTAATCGGACAAAGTACGTCCGTCC 3175405 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||| ||||| ||||||||||||| || ||||| ||| | || | ||||||||||| Sbjct 3175404 TCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGGGAATGCCCTCCTTGTCC 3175345 Query 34886 TTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGG 34943 | || || ||||| || || || | || || |||||| || | ||| |||| Sbjct 3175344 TGGATCTTAGCCTTGAC--ATTCTCGATGGTGTCCGAGGGCTCGACCTCGAGGGTGATGG 3175287 Query 34944 TCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 |||| || || || ||||| || |||||||||||| Sbjct 3175286 TCTTGCCAGTCAGAGTCTTCACGAAGATCTGCATG 3175252 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325673786665010