Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20pseudoobscura_20pseudoobscura_20[refseq_20GCF_5F0000017
65.3_202013-04-11] 4,790 sequences; 152,696,384 total letters
Query= NC_024447.1
Length=282356
Score E
Sequences producing significant alignments: (Bits) Value
seq10 95.1 2e-14
>seq10
Length=19787792
Score = 95.1 bits (104), Expect = 2e-14
Identities = 165/240 (69%), Gaps = 0/240 (0%)
Strand=Plus/Minus
Query 183043 CAGATGATGAGAGAAGGAAAAATGCATAGTTTTTTACGAATGTACTGGGCTAAAAAGATA 183102
||| || || | || || || ||||| | ||| | || ||||||||||| || || |||
Sbjct 8707780 CAGCTGGTGCGGGAGGGCAAGATGCACGGATTTCTGCGCATGTACTGGGCCAAGAAAATA 8707721
Query 183103 CTTGAATGGACAAGAACTCCGGAAGATGCTTTGAGTTATAGTATCTATATGAACAATAAG 183162
|| || ||||| || ||||| | || || || ||| ||||| | |||
Sbjct 8707720 CTCGAGTGGACGGCCACGCCGGAGCAGGCGCTGGAGTACGCGATCCTGCTGAACGACAAG 8707661
Query 183163 TACGAACTAGACGGTACGGATCCTAACGGATACGTAGGTTGTATGTGGTCTATTTGCGGA 183222
||| |||||||| ||||| || || || || || || |||||||||||| | ||
Sbjct 8707660 TACAGCCTAGACGGGCGCGATCCCAATGGCTATGTGGGCTGCATGTGGTCTATTGGGGGC 8707601
Query 183223 TTACACGATAGAGCGTGGAAAGAAAGACCTATATTTGGAAAGATAAGATATATGAATTAT 183282
||||||||| | ||||| || | | ||||| |||||||| | || ||||| |||
Sbjct 8707600 ATACACGATATGGGCTGGAAGGAGCGTGCGATATTCGGAAAGATTCGCTACATGAACTAT 8707541
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 903357108254400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |