Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20pseudoobscura_20pseudoobscura_20[refseq_20GCF_5F0000017
65.3_202013-04-11] 4,790 sequences; 152,696,384 total letters
Query= NC_024450.1
Length=204054
Score E
Sequences producing significant alignments: (Bits) Value
seq1016 95.1 2e-14
seq13 95.1 2e-14
seq14 91.5 2e-13
seq1 91.5 2e-13
>seq1016
Length=2573
Score = 95.1 bits (104), Expect = 2e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|||||| |||||||||||||||||| |||| ||||| | |||||||||||||||| ||||
Sbjct 1672 TCCTCGATAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 1731
Query 8718 CCCGACGAGGAG 8729
|||| || ||||
Sbjct 1732 CCCGTCGGGGAG 1743
Score = 91.5 bits (100), Expect = 2e-13
Identities = 67/78 (86%), Gaps = 0/78 (0%)
Strand=Plus/Minus
Query 139352 ACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACT 139411
||||| || |||||| | |||||||||||||||| | |||| |||||||| ||||||||
Sbjct 1744 ACTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACT 1685
Query 139412 ATACTAACGAGGATTTTG 139429
|||||| ||||||| |||
Sbjct 1684 ATACTATCGAGGATGTTG 1667
Score = 86.0 bits (94), Expect = 8e-12
Identities = 63/72 (88%), Gaps = 1/72 (1%)
Strand=Plus/Plus
Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| ||||
Sbjct 1672 TCCTCGATAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 1731
Query 11789 CCCGACGAGGAG 11800
|||| || ||||
Sbjct 1732 CCCGTCGGGGAG 1743
>seq13
Length=2439919
Score = 95.1 bits (104), Expect = 2e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|||||| |||||||||||||||||| |||| ||||| | |||||||||||||||| ||||
Sbjct 979504 TCCTCGATAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 979563
Query 8718 CCCGACGAGGAG 8729
|||| || ||||
Sbjct 979564 CCCGTCGGGGAG 979575
Score = 95.1 bits (104), Expect = 2e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|||||| |||||||||||||||||| |||| ||||| | |||||||||||||||| ||||
Sbjct 984244 TCCTCGATAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 984185
Query 8718 CCCGACGAGGAG 8729
|||| || ||||
Sbjct 984184 CCCGTCGGGGAG 984173
Score = 95.1 bits (104), Expect = 2e-14
Identities = 71/82 (87%), Gaps = 1/82 (1%)
Strand=Plus/Minus
Query 11729 GTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 11787
||||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| |||
Sbjct 1054431 GTCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATT 1054372
Query 11788 CCCCGACGAGGAGGGAGGTTAA 11809
||||| || |||| || |||||
Sbjct 1054371 CCCCGTCGGGGAGAGATGTTAA 1054350
Score = 93.3 bits (102), Expect = 6e-14
Identities = 66/76 (87%), Gaps = 0/76 (0%)
Strand=Plus/Minus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| || |||||| | |||||||||||||||| | |||| |||||||| |||||||||
Sbjct 979575 CTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACTA 979516
Query 139413 TACTAACGAGGATTTT 139428
||||| ||||||||||
Sbjct 979515 TACTATCGAGGATTTT 979500
Score = 91.5 bits (100), Expect = 2e-13
Identities = 70/82 (85%), Gaps = 1/82 (1%)
Strand=Plus/Minus
Query 11729 GTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 11787
||||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| |||
Sbjct 1011898 GTCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATT 1011839
Query 11788 CCCCGACGAGGAGGGAGGTTAA 11809
||||| || |||| || || ||
Sbjct 1011838 CCCCGTCGGGGAGAGATGTCAA 1011817
Score = 89.7 bits (98), Expect = 7e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| ||||
Sbjct 1011897 TCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 1011838
Query 8718 CCCGACGAGGAG 8729
|||| || ||||
Sbjct 1011837 CCCGTCGGGGAG 1011826
Score = 89.7 bits (98), Expect = 7e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| ||||
Sbjct 1019416 TCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 1019475
Query 8718 CCCGACGAGGAG 8729
|||| || ||||
Sbjct 1019476 CCCGTCGGGGAG 1019487
Score = 89.7 bits (98), Expect = 7e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| ||||
Sbjct 1020285 TCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 1020226
Query 8718 CCCGACGAGGAG 8729
|||| || ||||
Sbjct 1020225 CCCGTCGGGGAG 1020214
Score = 89.7 bits (98), Expect = 7e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| ||||
Sbjct 1054430 TCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 1054371
Query 8718 CCCGACGAGGAG 8729
|||| || ||||
Sbjct 1054370 CCCGTCGGGGAG 1054359
Score = 89.7 bits (98), Expect = 7e-13
Identities = 69/81 (85%), Gaps = 1/81 (1%)
Strand=Plus/Plus
Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| ||||
Sbjct 1143610 TCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 1143669
Query 11789 CCCGACGAGGAGGGAGGTTAA 11809
|||| || |||| || || ||
Sbjct 1143670 CCCGTCGGGGAGAGATGTGAA 1143690
Score = 89.7 bits (98), Expect = 7e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| ||||
Sbjct 1143610 TCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 1143669
Query 8718 CCCGACGAGGAG 8729
|||| || ||||
Sbjct 1143670 CCCGTCGGGGAG 1143681
Score = 87.8 bits (96), Expect = 2e-12
Identities = 64/73 (88%), Gaps = 1/73 (1%)
Strand=Plus/Plus
Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| ||||
Sbjct 979504 TCCTCGATAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 979563
Query 11789 CCCGACGAGGAGG 11801
|||| || |||||
Sbjct 979564 CCCGTCGGGGAGG 979576
Score = 87.8 bits (96), Expect = 2e-12
Identities = 63/73 (86%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| || |||||| | |||||||||||||||| | |||| |||||||| |||||||||
Sbjct 984173 CTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACTA 984232
Query 139413 TACTAACGAGGAT 139425
||||| |||||||
Sbjct 984233 TACTATCGAGGAT 984245
Score = 87.8 bits (96), Expect = 2e-12
Identities = 67/78 (86%), Gaps = 1/78 (1%)
Strand=Plus/Plus
Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| ||||
Sbjct 1019416 TCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 1019475
Query 11789 CCCGACGAGGAGGGAGGT 11806
|||| || |||| || ||
Sbjct 1019476 CCCGTCGGGGAGAGATGT 1019493
Score = 87.8 bits (96), Expect = 2e-12
Identities = 64/73 (88%), Gaps = 1/73 (1%)
Strand=Plus/Minus
Query 11729 GTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 11787
||||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| |||
Sbjct 1020286 GTCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATT 1020227
Query 11788 CCCCGACGAGGAG 11800
||||| || ||||
Sbjct 1020226 CCCCGTCGGGGAG 1020214
Score = 86.0 bits (94), Expect = 8e-12
Identities = 63/72 (88%), Gaps = 1/72 (1%)
Strand=Plus/Minus
Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| ||||
Sbjct 984244 TCCTCGATAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 984185
Query 11789 CCCGACGAGGAG 11800
|||| || ||||
Sbjct 984184 CCCGTCGGGGAG 984173
Score = 86.0 bits (94), Expect = 8e-12
Identities = 65/77 (84%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| || |||||| | |||||||||||||||| | |||| |||||||| | |||||||
Sbjct 1019487 CTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 1019428
Query 139413 TACTAACGAGGATTTTG 139429
||||| ||||||| |||
Sbjct 1019427 TACTATCGAGGATGTTG 1019411
Score = 84.2 bits (92), Expect = 3e-11
Identities = 64/76 (84%), Gaps = 0/76 (0%)
Strand=Plus/Minus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| || |||||| | |||||||||||||||| | |||| |||||||| | |||||||
Sbjct 1143681 CTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 1143622
Query 139413 TACTAACGAGGATTTT 139428
||||| ||||||| ||
Sbjct 1143621 TACTATCGAGGATGTT 1143606
Score = 82.4 bits (90), Expect = 1e-10
Identities = 63/75 (84%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 139350 CAACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCA 139409
|| |||| || |||||| | |||||||||||||||| | |||| |||||||| | ||||
Sbjct 1020211 CATCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCA 1020270
Query 139410 CTATACTAACGAGGA 139424
|||||||| ||||||
Sbjct 1020271 CTATACTATCGAGGA 1020285
>seq14
Length=11685562
Score = 91.5 bits (100), Expect = 2e-13
Identities = 67/77 (87%), Gaps = 1/77 (1%)
Strand=Plus/Minus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| ||||
Sbjct 7027107 TCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 7027048
Query 8718 CCCGACGAGGAGCAGAG 8734
|||| || |||| ||||
Sbjct 7027047 CCCGTCGGGGAG-AGAG 7027032
Score = 89.7 bits (98), Expect = 7e-13
Identities = 69/81 (85%), Gaps = 1/81 (1%)
Strand=Plus/Plus
Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| ||||
Sbjct 7024151 TCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 7024210
Query 11789 CCCGACGAGGAGGGAGGTTAA 11809
|||| || |||| || || ||
Sbjct 7024211 CCCGTCGGGGAGAGATGTAAA 7024231
Score = 89.7 bits (98), Expect = 7e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| ||||
Sbjct 7024151 TCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 7024210
Query 8718 CCCGACGAGGAG 8729
|||| || ||||
Sbjct 7024211 CCCGTCGGGGAG 7024222
Score = 89.7 bits (98), Expect = 7e-13
Identities = 69/81 (85%), Gaps = 1/81 (1%)
Strand=Plus/Plus
Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| ||||
Sbjct 7024483 TCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 7024542
Query 11789 CCCGACGAGGAGGGAGGTTAA 11809
|||| || |||| || || ||
Sbjct 7024543 CCCGTCGGGGAGAGATGTAAA 7024563
Score = 89.7 bits (98), Expect = 7e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| ||||
Sbjct 7024483 TCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 7024542
Query 8718 CCCGACGAGGAG 8729
|||| || ||||
Sbjct 7024543 CCCGTCGGGGAG 7024554
Score = 89.7 bits (98), Expect = 7e-13
Identities = 69/81 (85%), Gaps = 1/81 (1%)
Strand=Plus/Minus
Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| ||||
Sbjct 7026658 TCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 7026599
Query 11789 CCCGACGAGGAGGGAGGTTAA 11809
|||| || |||| || || ||
Sbjct 7026598 CCCGTCGGGGAGAGATGTAAA 7026578
Score = 89.7 bits (98), Expect = 7e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| ||||
Sbjct 7026658 TCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 7026599
Query 8718 CCCGACGAGGAG 8729
|||| || ||||
Sbjct 7026598 CCCGTCGGGGAG 7026587
Score = 89.7 bits (98), Expect = 7e-13
Identities = 66/76 (87%), Gaps = 1/76 (1%)
Strand=Plus/Minus
Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| ||||
Sbjct 7027107 TCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 7027048
Query 11789 CCCGACGAGGAGGGAG 11804
|||| || |||| |||
Sbjct 7027047 CCCGTCGGGGAGAGAG 7027032
Score = 89.7 bits (98), Expect = 7e-13
Identities = 69/81 (85%), Gaps = 1/81 (1%)
Strand=Plus/Minus
Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| ||||
Sbjct 7027570 TCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 7027511
Query 11789 CCCGACGAGGAGGGAGGTTAA 11809
|||| || |||| || || ||
Sbjct 7027510 CCCGTCGGGGAGAGATGTGAA 7027490
Score = 89.7 bits (98), Expect = 7e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| ||||
Sbjct 7027570 TCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 7027511
Query 8718 CCCGACGAGGAG 8729
|||| || ||||
Sbjct 7027510 CCCGTCGGGGAG 7027499
Score = 86.0 bits (94), Expect = 8e-12
Identities = 65/77 (84%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| || |||||| | |||||||||||||||| | |||| |||||||| | |||||||
Sbjct 7024222 CTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 7024163
Query 139413 TACTAACGAGGATTTTG 139429
||||| ||||||| |||
Sbjct 7024162 TACTATCGAGGATGTTG 7024146
Score = 86.0 bits (94), Expect = 8e-12
Identities = 65/77 (84%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| || |||||| | |||||||||||||||| | |||| |||||||| | |||||||
Sbjct 7024554 CTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 7024495
Query 139413 TACTAACGAGGATTTTG 139429
||||| ||||||| |||
Sbjct 7024494 TACTATCGAGGATGTTG 7024478
Score = 86.0 bits (94), Expect = 8e-12
Identities = 65/77 (84%), Gaps = 0/77 (0%)
Strand=Plus/Plus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| || |||||| | |||||||||||||||| | |||| |||||||| | |||||||
Sbjct 7026587 CTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 7026646
Query 139413 TACTAACGAGGATTTTG 139429
||||| ||||||| |||
Sbjct 7026647 TACTATCGAGGATGTTG 7026663
Score = 86.0 bits (94), Expect = 8e-12
Identities = 65/77 (84%), Gaps = 0/77 (0%)
Strand=Plus/Plus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| || |||||| | |||||||||||||||| | |||| |||||||| | |||||||
Sbjct 7027036 CTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 7027095
Query 139413 TACTAACGAGGATTTTG 139429
||||| ||||||| |||
Sbjct 7027096 TACTATCGAGGATGTTG 7027112
Score = 86.0 bits (94), Expect = 8e-12
Identities = 65/77 (84%), Gaps = 0/77 (0%)
Strand=Plus/Plus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| || |||||| | |||||||||||||||| | |||| |||||||| | |||||||
Sbjct 7027499 CTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 7027558
Query 139413 TACTAACGAGGATTTTG 139429
||||| ||||||| |||
Sbjct 7027559 TACTATCGAGGATGTTG 7027575
>seq1
Length=2692213
Score = 91.5 bits (100), Expect = 2e-13
Identities = 65/75 (87%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| ||||
Sbjct 481320 TCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 481261
Query 8718 CCCGACGAGGAGCAG 8732
|||| || |||| ||
Sbjct 481260 CCCGTCGGGGAGTAG 481246
Score = 86.0 bits (94), Expect = 8e-12
Identities = 65/77 (84%), Gaps = 0/77 (0%)
Strand=Plus/Plus
Query 139349 ACAACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACC 139408
|| ||||| || |||||| | |||||||||||||||| | |||| |||||||| | |||
Sbjct 481245 ACTACTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACC 481304
Query 139409 ACTATACTAACGAGGAT 139425
||||||||| |||||||
Sbjct 481305 ACTATACTATCGAGGAT 481321
Score = 86.0 bits (94), Expect = 8e-12
Identities = 63/72 (88%), Gaps = 1/72 (1%)
Strand=Plus/Minus
Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| ||||
Sbjct 481320 TCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 481261
Query 11789 CCCGACGAGGAG 11800
|||| || ||||
Sbjct 481260 CCCGTCGGGGAG 481249
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 652805710917600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |