Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20pseudoobscura_20pseudoobscura_20[refseq_20GCF_5F0000017 65.3_202013-04-11] 4,790 sequences; 152,696,384 total letters Query= NC_024450.1 Length=204054 Score E Sequences producing significant alignments: (Bits) Value seq1016 95.1 2e-14 seq13 95.1 2e-14 seq14 91.5 2e-13 seq1 91.5 2e-13 >seq1016 Length=2573 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 |||||| |||||||||||||||||| |||| ||||| | |||||||||||||||| |||| Sbjct 1672 TCCTCGATAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 1731 Query 8718 CCCGACGAGGAG 8729 |||| || |||| Sbjct 1732 CCCGTCGGGGAG 1743 Score = 91.5 bits (100), Expect = 2e-13 Identities = 67/78 (86%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 139352 ACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACT 139411 ||||| || |||||| | |||||||||||||||| | |||| |||||||| |||||||| Sbjct 1744 ACTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACT 1685 Query 139412 ATACTAACGAGGATTTTG 139429 |||||| ||||||| ||| Sbjct 1684 ATACTATCGAGGATGTTG 1667 Score = 86.0 bits (94), Expect = 8e-12 Identities = 63/72 (88%), Gaps = 1/72 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 |||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| |||| Sbjct 1672 TCCTCGATAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 1731 Query 11789 CCCGACGAGGAG 11800 |||| || |||| Sbjct 1732 CCCGTCGGGGAG 1743 >seq13 Length=2439919 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 |||||| |||||||||||||||||| |||| ||||| | |||||||||||||||| |||| Sbjct 979504 TCCTCGATAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 979563 Query 8718 CCCGACGAGGAG 8729 |||| || |||| Sbjct 979564 CCCGTCGGGGAG 979575 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 |||||| |||||||||||||||||| |||| ||||| | |||||||||||||||| |||| Sbjct 984244 TCCTCGATAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 984185 Query 8718 CCCGACGAGGAG 8729 |||| || |||| Sbjct 984184 CCCGTCGGGGAG 984173 Score = 95.1 bits (104), Expect = 2e-14 Identities = 71/82 (87%), Gaps = 1/82 (1%) Strand=Plus/Minus Query 11729 GTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 11787 ||||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| ||| Sbjct 1054431 GTCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATT 1054372 Query 11788 CCCCGACGAGGAGGGAGGTTAA 11809 ||||| || |||| || ||||| Sbjct 1054371 CCCCGTCGGGGAGAGATGTTAA 1054350 Score = 93.3 bits (102), Expect = 6e-14 Identities = 66/76 (87%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| || |||||| | |||||||||||||||| | |||| |||||||| ||||||||| Sbjct 979575 CTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACTA 979516 Query 139413 TACTAACGAGGATTTT 139428 ||||| |||||||||| Sbjct 979515 TACTATCGAGGATTTT 979500 Score = 91.5 bits (100), Expect = 2e-13 Identities = 70/82 (85%), Gaps = 1/82 (1%) Strand=Plus/Minus Query 11729 GTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 11787 ||||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| ||| Sbjct 1011898 GTCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATT 1011839 Query 11788 CCCCGACGAGGAGGGAGGTTAA 11809 ||||| || |||| || || || Sbjct 1011838 CCCCGTCGGGGAGAGATGTCAA 1011817 Score = 89.7 bits (98), Expect = 7e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 |||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| |||| Sbjct 1011897 TCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 1011838 Query 8718 CCCGACGAGGAG 8729 |||| || |||| Sbjct 1011837 CCCGTCGGGGAG 1011826 Score = 89.7 bits (98), Expect = 7e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 |||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| |||| Sbjct 1019416 TCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 1019475 Query 8718 CCCGACGAGGAG 8729 |||| || |||| Sbjct 1019476 CCCGTCGGGGAG 1019487 Score = 89.7 bits (98), Expect = 7e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 |||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| |||| Sbjct 1020285 TCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 1020226 Query 8718 CCCGACGAGGAG 8729 |||| || |||| Sbjct 1020225 CCCGTCGGGGAG 1020214 Score = 89.7 bits (98), Expect = 7e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 |||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| |||| Sbjct 1054430 TCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 1054371 Query 8718 CCCGACGAGGAG 8729 |||| || |||| Sbjct 1054370 CCCGTCGGGGAG 1054359 Score = 89.7 bits (98), Expect = 7e-13 Identities = 69/81 (85%), Gaps = 1/81 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 |||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| |||| Sbjct 1143610 TCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 1143669 Query 11789 CCCGACGAGGAGGGAGGTTAA 11809 |||| || |||| || || || Sbjct 1143670 CCCGTCGGGGAGAGATGTGAA 1143690 Score = 89.7 bits (98), Expect = 7e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 |||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| |||| Sbjct 1143610 TCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 1143669 Query 8718 CCCGACGAGGAG 8729 |||| || |||| Sbjct 1143670 CCCGTCGGGGAG 1143681 Score = 87.8 bits (96), Expect = 2e-12 Identities = 64/73 (88%), Gaps = 1/73 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 |||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| |||| Sbjct 979504 TCCTCGATAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 979563 Query 11789 CCCGACGAGGAGG 11801 |||| || ||||| Sbjct 979564 CCCGTCGGGGAGG 979576 Score = 87.8 bits (96), Expect = 2e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| || |||||| | |||||||||||||||| | |||| |||||||| ||||||||| Sbjct 984173 CTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACTA 984232 Query 139413 TACTAACGAGGAT 139425 ||||| ||||||| Sbjct 984233 TACTATCGAGGAT 984245 Score = 87.8 bits (96), Expect = 2e-12 Identities = 67/78 (86%), Gaps = 1/78 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 |||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| |||| Sbjct 1019416 TCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 1019475 Query 11789 CCCGACGAGGAGGGAGGT 11806 |||| || |||| || || Sbjct 1019476 CCCGTCGGGGAGAGATGT 1019493 Score = 87.8 bits (96), Expect = 2e-12 Identities = 64/73 (88%), Gaps = 1/73 (1%) Strand=Plus/Minus Query 11729 GTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 11787 ||||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| ||| Sbjct 1020286 GTCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATT 1020227 Query 11788 CCCCGACGAGGAG 11800 ||||| || |||| Sbjct 1020226 CCCCGTCGGGGAG 1020214 Score = 86.0 bits (94), Expect = 8e-12 Identities = 63/72 (88%), Gaps = 1/72 (1%) Strand=Plus/Minus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 |||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| |||| Sbjct 984244 TCCTCGATAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 984185 Query 11789 CCCGACGAGGAG 11800 |||| || |||| Sbjct 984184 CCCGTCGGGGAG 984173 Score = 86.0 bits (94), Expect = 8e-12 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| || |||||| | |||||||||||||||| | |||| |||||||| | ||||||| Sbjct 1019487 CTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 1019428 Query 139413 TACTAACGAGGATTTTG 139429 ||||| ||||||| ||| Sbjct 1019427 TACTATCGAGGATGTTG 1019411 Score = 84.2 bits (92), Expect = 3e-11 Identities = 64/76 (84%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| || |||||| | |||||||||||||||| | |||| |||||||| | ||||||| Sbjct 1143681 CTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 1143622 Query 139413 TACTAACGAGGATTTT 139428 ||||| ||||||| || Sbjct 1143621 TACTATCGAGGATGTT 1143606 Score = 82.4 bits (90), Expect = 1e-10 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 139350 CAACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCA 139409 || |||| || |||||| | |||||||||||||||| | |||| |||||||| | |||| Sbjct 1020211 CATCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCA 1020270 Query 139410 CTATACTAACGAGGA 139424 |||||||| |||||| Sbjct 1020271 CTATACTATCGAGGA 1020285 >seq14 Length=11685562 Score = 91.5 bits (100), Expect = 2e-13 Identities = 67/77 (87%), Gaps = 1/77 (1%) Strand=Plus/Minus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 |||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| |||| Sbjct 7027107 TCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 7027048 Query 8718 CCCGACGAGGAGCAGAG 8734 |||| || |||| |||| Sbjct 7027047 CCCGTCGGGGAG-AGAG 7027032 Score = 89.7 bits (98), Expect = 7e-13 Identities = 69/81 (85%), Gaps = 1/81 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 |||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| |||| Sbjct 7024151 TCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 7024210 Query 11789 CCCGACGAGGAGGGAGGTTAA 11809 |||| || |||| || || || Sbjct 7024211 CCCGTCGGGGAGAGATGTAAA 7024231 Score = 89.7 bits (98), Expect = 7e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 |||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| |||| Sbjct 7024151 TCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 7024210 Query 8718 CCCGACGAGGAG 8729 |||| || |||| Sbjct 7024211 CCCGTCGGGGAG 7024222 Score = 89.7 bits (98), Expect = 7e-13 Identities = 69/81 (85%), Gaps = 1/81 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 |||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| |||| Sbjct 7024483 TCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 7024542 Query 11789 CCCGACGAGGAGGGAGGTTAA 11809 |||| || |||| || || || Sbjct 7024543 CCCGTCGGGGAGAGATGTAAA 7024563 Score = 89.7 bits (98), Expect = 7e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 |||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| |||| Sbjct 7024483 TCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 7024542 Query 8718 CCCGACGAGGAG 8729 |||| || |||| Sbjct 7024543 CCCGTCGGGGAG 7024554 Score = 89.7 bits (98), Expect = 7e-13 Identities = 69/81 (85%), Gaps = 1/81 (1%) Strand=Plus/Minus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 |||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| |||| Sbjct 7026658 TCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 7026599 Query 11789 CCCGACGAGGAGGGAGGTTAA 11809 |||| || |||| || || || Sbjct 7026598 CCCGTCGGGGAGAGATGTAAA 7026578 Score = 89.7 bits (98), Expect = 7e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 |||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| |||| Sbjct 7026658 TCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 7026599 Query 8718 CCCGACGAGGAG 8729 |||| || |||| Sbjct 7026598 CCCGTCGGGGAG 7026587 Score = 89.7 bits (98), Expect = 7e-13 Identities = 66/76 (87%), Gaps = 1/76 (1%) Strand=Plus/Minus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 |||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| |||| Sbjct 7027107 TCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 7027048 Query 11789 CCCGACGAGGAGGGAG 11804 |||| || |||| ||| Sbjct 7027047 CCCGTCGGGGAGAGAG 7027032 Score = 89.7 bits (98), Expect = 7e-13 Identities = 69/81 (85%), Gaps = 1/81 (1%) Strand=Plus/Minus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 |||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| |||| Sbjct 7027570 TCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 7027511 Query 11789 CCCGACGAGGAGGGAGGTTAA 11809 |||| || |||| || || || Sbjct 7027510 CCCGTCGGGGAGAGATGTGAA 7027490 Score = 89.7 bits (98), Expect = 7e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 |||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| |||| Sbjct 7027570 TCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 7027511 Query 8718 CCCGACGAGGAG 8729 |||| || |||| Sbjct 7027510 CCCGTCGGGGAG 7027499 Score = 86.0 bits (94), Expect = 8e-12 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| || |||||| | |||||||||||||||| | |||| |||||||| | ||||||| Sbjct 7024222 CTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 7024163 Query 139413 TACTAACGAGGATTTTG 139429 ||||| ||||||| ||| Sbjct 7024162 TACTATCGAGGATGTTG 7024146 Score = 86.0 bits (94), Expect = 8e-12 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| || |||||| | |||||||||||||||| | |||| |||||||| | ||||||| Sbjct 7024554 CTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 7024495 Query 139413 TACTAACGAGGATTTTG 139429 ||||| ||||||| ||| Sbjct 7024494 TACTATCGAGGATGTTG 7024478 Score = 86.0 bits (94), Expect = 8e-12 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| || |||||| | |||||||||||||||| | |||| |||||||| | ||||||| Sbjct 7026587 CTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 7026646 Query 139413 TACTAACGAGGATTTTG 139429 ||||| ||||||| ||| Sbjct 7026647 TACTATCGAGGATGTTG 7026663 Score = 86.0 bits (94), Expect = 8e-12 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| || |||||| | |||||||||||||||| | |||| |||||||| | ||||||| Sbjct 7027036 CTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 7027095 Query 139413 TACTAACGAGGATTTTG 139429 ||||| ||||||| ||| Sbjct 7027096 TACTATCGAGGATGTTG 7027112 Score = 86.0 bits (94), Expect = 8e-12 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| || |||||| | |||||||||||||||| | |||| |||||||| | ||||||| Sbjct 7027499 CTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 7027558 Query 139413 TACTAACGAGGATTTTG 139429 ||||| ||||||| ||| Sbjct 7027559 TACTATCGAGGATGTTG 7027575 >seq1 Length=2692213 Score = 91.5 bits (100), Expect = 2e-13 Identities = 65/75 (87%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 |||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| |||| Sbjct 481320 TCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 481261 Query 8718 CCCGACGAGGAGCAG 8732 |||| || |||| || Sbjct 481260 CCCGTCGGGGAGTAG 481246 Score = 86.0 bits (94), Expect = 8e-12 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 139349 ACAACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACC 139408 || ||||| || |||||| | |||||||||||||||| | |||| |||||||| | ||| Sbjct 481245 ACTACTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACC 481304 Query 139409 ACTATACTAACGAGGAT 139425 ||||||||| ||||||| Sbjct 481305 ACTATACTATCGAGGAT 481321 Score = 86.0 bits (94), Expect = 8e-12 Identities = 63/72 (88%), Gaps = 1/72 (1%) Strand=Plus/Minus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 |||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| |||| Sbjct 481320 TCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 481261 Query 11789 CCCGACGAGGAG 11800 |||| || |||| Sbjct 481260 CCCGTCGGGGAG 481249 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 652805710917600