Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20pseudoobscura_20pseudoobscura_20[refseq_20GCF_5F0000017
65.3_202013-04-11] 4,790 sequences; 152,696,384 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq3 152 5e-32
seq10 141 9e-29
seq6 141 9e-29
seq12 132 5e-26
seq7 129 6e-25
>seq3
Length=12541198
Score = 152 bits (168), Expect = 5e-32
Identities = 162/212 (76%), Gaps = 4/212 (2%)
Strand=Plus/Minus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGA 133512
||||| | ||||||||| ||||| || ||||||||| || || ||| |||||| |
Sbjct 3175458 AAATGCAAGGTGGACTCCTTCTGGATGTTGTAATCGGACAAAGT--ACGTCCGTCCTCCA 3175401
Query 133513 GCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGA 133572
|||||||||| ||| | || | |||||||| || || || ||||| |||||||| ||
Sbjct 3175400 GCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGGGAATGCCCTCCTTGTCCTGGA 3175341
Query 133573 TCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632
|||| ||||| | ||| | ||||| | |||||| || |||| ||||| ||| ||||
Sbjct 3175340 TCTTAGCCTTGACATTCTCGATGGTGTCCGAGGGCTCGACCTCGAGGGTGATGGTCTTGC 3175281
Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCATGGCT 133664
| |||||||| || ||||| ||||||||| ||
Sbjct 3175280 CAGTCAGAGTCTTCACGAAGATCTGCATGCCT 3175249
Score = 147 bits (162), Expect = 2e-30
Identities = 159/209 (76%), Gaps = 4/209 (2%)
Strand=Plus/Minus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGA 133512
||||| | ||||||||| ||||| || ||||||||| || || ||| |||||| |
Sbjct 3174546 AAATGCAAGGTGGACTCCTTCTGGATGTTGTAATCGGACAAAGT--ACGTCCGTCCTCCA 3174489
Query 133513 GCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGA 133572
|||||||||| ||| | || | |||||||| || || || ||||| |||||||| ||
Sbjct 3174488 GCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGGGAATGCCCTCCTTGTCCTGGA 3174429
Query 133573 TCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632
|||| ||||| | ||| | ||||| | |||||| || |||| ||||| ||| ||||
Sbjct 3174428 TCTTAGCCTTGACATTCTCGATGGTGTCCGAGGGCTCGACCTCGAGGGTGATGGTCTTGC 3174369
Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCATG 133661
| |||||||| || || || |||||||||
Sbjct 3174368 CAGTCAGAGTCTTGACAAAGATCTGCATG 3174340
Score = 147 bits (162), Expect = 2e-30
Identities = 159/209 (76%), Gaps = 4/209 (2%)
Strand=Plus/Minus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGA 133512
||||| | ||||||||| ||||| || ||||||||| || || ||| |||||| |
Sbjct 3174774 AAATGCAAGGTGGACTCCTTCTGGATGTTGTAATCGGACAAAGT--ACGTCCGTCCTCCA 3174717
Query 133513 GCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGA 133572
|||||||||| ||| | || | |||||||| || || || ||||| |||||||| ||
Sbjct 3174716 GCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGGGAATGCCCTCCTTGTCCTGGA 3174657
Query 133573 TCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632
|||| ||||| | ||| | ||||| | |||||| || |||| ||||| ||| ||||
Sbjct 3174656 TCTTAGCCTTGACATTCTCGATGGTGTCCGAGGGCTCGACCTCGAGGGTGATGGTCTTGC 3174597
Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCATG 133661
| |||||||| || || || |||||||||
Sbjct 3174596 CAGTCAGAGTCTTGACAAAGATCTGCATG 3174568
Score = 145 bits (160), Expect = 7e-30
Identities = 158/208 (76%), Gaps = 4/208 (2%)
Strand=Plus/Minus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGA 133512
||||| | ||||||||| ||||| || ||||||||| || || ||| |||||| |
Sbjct 3174090 AAATGCAAGGTGGACTCCTTCTGGATGTTGTAATCGGACAAGGT--ACGTCCGTCCTCCA 3174033
Query 133513 GCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGA 133572
|||||||||| ||| | || | |||||||| || || || ||||| |||||||| ||
Sbjct 3174032 GCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGGGAATGCCCTCCTTGTCCTGGA 3173973
Query 133573 TCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632
|||| ||||| | ||| | ||||| | |||||| || |||| ||||| ||| ||||
Sbjct 3173972 TCTTGGCCTTGACATTCTCGATGGTGTCCGAGGGCTCAACCTCGAGGGTGATGGTCTTGC 3173913
Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCAT 133660
| ||||| || || ||||| ||||||||
Sbjct 3173912 CAGTCAGGGTCTTCACGAAGATCTGCAT 3173885
Score = 141 bits (156), Expect = 9e-29
Identities = 158/209 (76%), Gaps = 4/209 (2%)
Strand=Plus/Minus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGA 133512
||||| | ||||||||| ||||| || ||||| ||| || || ||| |||||| |
Sbjct 3175002 AAATGCAAGGTGGACTCCTTCTGGATGTTGTAGTCGGACAAAGT--ACGTCCGTCCTCCA 3174945
Query 133513 GCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGA 133572
|||||||||| ||| | || | |||||||| || || || ||||| |||||||| ||
Sbjct 3174944 GCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGGGAATGCCCTCCTTGTCCTGGA 3174885
Query 133573 TCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632
|||| ||||| | ||| | ||||| | |||||| || |||| ||||| ||| ||||
Sbjct 3174884 TCTTAGCCTTGACATTCTCGATGGTGTCCGAGGGCTCGACCTCGAGGGTGATGGTCTTGC 3174825
Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCATG 133661
| |||||||| || || || |||||||||
Sbjct 3174824 CAGTCAGAGTCTTGACAAAGATCTGCATG 3174796
Score = 141 bits (156), Expect = 9e-29
Identities = 158/209 (76%), Gaps = 4/209 (2%)
Strand=Plus/Minus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGA 133512
||||| | ||||||||| ||||| || ||||| ||| || || ||| |||||| |
Sbjct 3175686 AAATGCAAGGTGGACTCCTTCTGGATGTTGTAGTCGGACAAAGT--ACGTCCGTCCTCCA 3175629
Query 133513 GCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGA 133572
|||||||||| ||| | || | |||||||| || || || ||||| |||||||| ||
Sbjct 3175628 GCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGGGAATGCCCTCCTTGTCCTGGA 3175569
Query 133573 TCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632
|||| ||||| | ||| | ||||| | |||||| || |||| ||||| ||| ||||
Sbjct 3175568 TCTTAGCCTTGACATTCTCGATGGTGTCCGAGGGCTCGACCTCGAGGGTGATGGTCTTGC 3175509
Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCATG 133661
| |||||||| || || || |||||||||
Sbjct 3175508 CAGTCAGAGTCTTGACAAAGATCTGCATG 3175480
Score = 140 bits (154), Expect = 3e-28
Identities = 152/200 (76%), Gaps = 4/200 (2%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGCTGCTTGC 133521
|||||||| ||||| || ||||||||| || || ||| |||||| ||||||||||
Sbjct 3175905 GTGGACTCCTTCTGGATGTTGTAATCGGACAAAGT--ACGTCCGTCCTCCAGCTGCTTGC 3175848
Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581
| ||| | || | |||||||| || || || ||||| |||||||| |||||| ||
Sbjct 3175847 CGGCGAAGATCAAACGCTGCTGATCTGGGGGAATGCCCTCCTTGTCCTGGATCTTAGCCT 3175788
Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641
||| | ||| | ||||| | |||||| || |||| ||||| ||| ||||| |||||||
Sbjct 3175787 TGACATTCTCGATGGTGTCCGAGGGCTCGACCTCGAGGGTGATGGTCTTGCCAGTCAGAG 3175728
Query 133642 TTTTTACGAAAATCTGCATG 133661
| || || || |||||||||
Sbjct 3175727 TCTTGACAAAGATCTGCATG 3175708
Score = 138 bits (152), Expect = 1e-27
Identities = 157/209 (75%), Gaps = 4/209 (2%)
Strand=Plus/Minus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGA 133512
||||| | ||||||||| ||||| || ||||| ||| || || ||| |||||| |
Sbjct 3174318 AAATGCAAGGTGGACTCCTTCTGGATGTTGTAGTCGGACAAAGT--ACGTCCGTCCTCCA 3174261
Query 133513 GCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGA 133572
|||||||||| ||| | || | |||||||| || || || ||||| |||||||| ||
Sbjct 3174260 GCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGGGAATGCCCTCCTTGTCCTGGA 3174201
Query 133573 TCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632
|||| ||||| | ||| | ||||| | |||||| || |||| ||||| || ||||
Sbjct 3174200 TCTTAGCCTTGACATTCTCGATGGTGTCCGAGGGCTCGACCTCGAGGGTGATAGTCTTGC 3174141
Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCATG 133661
| |||||||| || || || |||||||||
Sbjct 3174140 CAGTCAGAGTCTTGACAAAGATCTGCATG 3174112
Score = 132 bits (146), Expect = 5e-26
Identities = 156/209 (75%), Gaps = 4/209 (2%)
Strand=Plus/Minus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGA 133512
|| || | ||| ||||| ||||| || ||||| ||| || || ||| |||||| |
Sbjct 3175230 AAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAAAGT--ACGTCCGTCCTCCA 3175173
Query 133513 GCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGA 133572
|||||||||| ||| | || | |||||||| || || || ||||| |||||||| ||
Sbjct 3175172 GCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGGGAATGCCCTCCTTGTCCTGGA 3175113
Query 133573 TCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632
|||| ||||| | ||| | ||||| | |||||| || |||| ||||| ||| ||||
Sbjct 3175112 TCTTAGCCTTGACATTCTCGATGGTGTCCGAGGGCTCGACCTCGAGGGTGATGGTCTTGC 3175053
Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCATG 133661
| |||||||| || || || |||||||||
Sbjct 3175052 CAGTCAGAGTCTTGACAAAGATCTGCATG 3175024
>seq10
Length=19787792
Score = 141 bits (156), Expect = 9e-29
Identities = 540/827 (65%), Gaps = 28/827 (3%)
Strand=Plus/Plus
Query 120348 GCGCTTGTACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTT 120407
||||| ||||||| | || |||||||| |||||||| || || |||| ||| || |
Sbjct 12207742 GCGCTGGTACTCGGCCACCTTCTTCTCAAAGAAGTTTGTCTTTCCGTCCAGCGAGATCAT 12207801
Query 120408 GTTCATAAACTCGAACGGGTTGCTCGCGTTAAAGTATTTCGGCTGGCCCAACTGTACGAG 120467
| ||| || | ||| || || | | ||| || || | || | || | ||
Sbjct 12207802 CTCCATGAAATTGAAAGGATTCTTAGTGTTGTAGATCTTACCCACACCGAGCTCCCCTAG 12207861
Query 120468 CAGTCGGTCCGCTACAAACTCAATGTACTCGCACATGGACTGCGC-GTTCATGCCCAGCA 120526
||| || || || || ||||| ||||||| | ||||| | | | ||||||||| | ||
Sbjct 12207862 CAGCCGATCGGCCACGAACTCGATGTACTGGGACATG-AGAACACAGTTCATGCCAATCA 12207920
Query 120527 ACGCCACCGGCAACGCCGACGTGAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGAACA 120586
| || |||| || |||| ||||||| ||| || ||||| || ||| ||| |
Sbjct 12207921 AATTGACGGGCAGGGCTTCAGTGAGGAACTCCTGCTCGATTTCCACAGCATCCCTGATGA 12207980
Query 120587 TGGCGAGCATAGTGTGGCCGGGCATCTTGTGTTCGATGCGC--GTTCGGTAGTACAGG-- 120642
| ||| || | | ||| |||| | || ||| | | | ||| |||| |
Sbjct 12207981 TCTCGATGAT-GCGCTCCCG-----CTTGGGC-CGCTGCACTAGAT-GGTGATACATGAG 12208032
Query 120643 CAC-GCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAG 120701
||| |||||||| ||| || || ||||| || || |||||||||||| || |||||
Sbjct 12208033 CACCGCAAAGTCGCAGTGAAGACCTTCGTCACGGGAGATCAGCTCGTTGGAGAAGGTCAG 12208092
Query 120702 GCCGGGCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAGAA 120761
|||||||||| || | |||| | | || || | |||||||||||| ||||||
Sbjct 12208093 ACCGGGCATGAGACCACGCTTCTTCAGCCAAAAGATCGAGGCAAAGCTGCCACTAAAGAA 12208152
Query 120762 CACGCCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGCTGTC 120821
| || |||||| |||||||| | || |||||||| || | |||| || |
Sbjct 12208153 GATTCCTTCCACGGCCGCAAAGGCAATAATACGCTCGGCAAAGTTGGCCGATTTCGAGGA 12208212
Query 120822 GATCCACTTCATGGCCCACTCGGCCTTTTTGCGC---ACGCACGGCATCCGCTCGAACGC 120878
||||| ||||||||| || ||| |||||| || |||||| ||| | ||
Sbjct 12208213 TATCCAGGACATGGCCCAGTCCGCC---TTGCGCTTTACAGCCGGCATGGTCTCAATAGC 12208269
Query 120879 GTTCAGCAGCATGTCGCGCTCGCCCTCCT-CCGCAATCAGCTGATGGATGAGCAGATTGT 120937
|| | || ||||||||| | || ||| | || || | ||||||| |||
Sbjct 12208270 ATTGAACAAGTAGTCGCGCTCCTGCGGCTCCCGTATGTAGGTG-TCAATGAGCACGCTGT 12208328
Query 120938 ACATTTCCGTGTGCACGCACTCGATCAGCACTTGCTGGTTGTAAAAGTACTGCGCCTC-C 120996
|||| || | |||||| ||| || | || | ||| ||| | | |||||
Sbjct 12208329 ACATCTCGGAGTGCACATTCTCCATGGCTATCTGGAAGCCGTAGAAGCAACGTGCCTCTG 12208388
Query 120997 AGCTCGGGCACCGCCCGCTGCATGTACTCGATAAGGTTAATATTCACGATACTGTCGGCG 121056
| || ||||| || | | | ||||| || || || || || | ||| | |
Sbjct 12208389 TGATC-TGCACCTCCTGACTAAAGCGCTCGACCAGATTCTCGTTAACAATGCCGTCCGAG 12208447
Query 121057 GCGGCGAAGAACGCCAGCACGTGCTTGATAAAGTGTCGCTCGTCGTCCGTGAGCTTGTGC 121116
|| |||||||| |||||||| || |||||||| ||||||| ||| ||||| | ||
Sbjct 12208448 GCAGCGAAGAAGGCCAGCACATGGGAGATAAAGTAGCGCTCGTTGTCAGTGAG-ACGGGC 12208506
Query 121117 GCAAAATCGTCATAGTCCTTGGACAGGTCGACCTCCTCCACCTTCCA 121163
| | |||| |||||| || || || ||||| ||||| ||||
Sbjct 12208507 -CCAGTCCGTC-GCGTCCTTTGATAGATCCACCTCTTCCACAGTCCA 12208551
>seq6
Length=9197557
Score = 141 bits (156), Expect = 9e-29
Identities = 157/207 (76%), Gaps = 2/207 (1%)
Strand=Plus/Plus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513
||||| | || ||||| ||||| || ||||| || | ||| | | | ||||| ||
Sbjct 543472 AAATGGAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTGCGGCCA-TCCTCCAG 543530
Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573
||||||||| ||| | ||||| ||||||||||| || ||||| || |||||||| |||
Sbjct 543531 CTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCAGGGGGGATTCCCTCCTTGTCCTGGAT 543590
Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633
||| ||| | | ||||| ||||||| |||||||| || | ||||| |||||| ||
Sbjct 543591 CTTGGCCTTCACGTTCTCAATGGTGTCGGATGGCTCCACCTCCAGGGTGATGGTTTTTCC 543650
Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660
|||||||| || ||||| ||||||||
Sbjct 543651 AGTCAGAGTCTTCACGAAGATCTGCAT 543677
Score = 136 bits (150), Expect = 4e-27
Identities = 156/207 (75%), Gaps = 2/207 (1%)
Strand=Plus/Plus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513
||||| | || ||||| ||||| || ||||| || | ||| | | | ||||| ||
Sbjct 542788 AAATGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTGCGGCCA-TCCTCCAG 542846
Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573
||||||||| ||| | ||||| ||||||||||| || ||||| || |||||||| |||
Sbjct 542847 CTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCTGGGGGGATTCCCTCCTTGTCCTGGAT 542906
Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633
||| ||| | | ||||| ||||||| |||||||| || | ||||| |||||| ||
Sbjct 542907 CTTGGCCTTCACGTTCTCAATGGTGTCGGATGGCTCCACCTCCAGGGTGATGGTTTTTCC 542966
Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660
||||| ||||| || ||||| |||||
Sbjct 542967 GGTCAAGGTTTTCACAAAAATTTGCAT 542993
Score = 136 bits (150), Expect = 4e-27
Identities = 156/207 (75%), Gaps = 2/207 (1%)
Strand=Plus/Plus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513
||||| | || ||||| ||||| || ||||| || | ||| | | | ||||| ||
Sbjct 543244 AAATGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTGCGGCCA-TCCTCCAG 543302
Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573
||||||||| ||| | ||||| ||||||||||| || ||||| || |||||||| |||
Sbjct 543303 CTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCAGGGGGGATTCCCTCCTTGTCCTGGAT 543362
Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633
||| ||| | | ||||| ||||||| |||||||| || | ||||| |||||| ||
Sbjct 543363 CTTGGCCTTCACGTTCTCAATGGTGTCGGATGGCTCCACCTCCAGGGTGATGGTTTTTCC 543422
Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660
||||| ||||| || ||||| |||||
Sbjct 543423 GGTCAAGGTTTTCACAAAAATTTGCAT 543449
Score = 136 bits (150), Expect = 4e-27
Identities = 156/207 (75%), Gaps = 2/207 (1%)
Strand=Plus/Plus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513
||||| | || ||||| ||||| || ||||| || | ||| | | | ||||| ||
Sbjct 543928 AAATGGAGAGTCGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCA-TCCTCCAG 543986
Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573
||||||||| ||| | ||||| ||||||||||| |||||||| || |||||||| |||
Sbjct 543987 CTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCTGGAGGGATTCCCTCCTTGTCCTGGAT 544046
Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633
||| ||| | | ||||| ||||||| |||||||| || | ||||| |||||| ||
Sbjct 544047 CTTGGCCTTTACGTTCTCAATGGTGTCGGATGGCTCCACCTCCAGGGTGATGGTTTTTCC 544106
Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660
||||| ||||| || || || |||||
Sbjct 544107 GGTCAAGGTTTTCACAAAGATTTGCAT 544133
Score = 132 bits (146), Expect = 5e-26
Identities = 155/207 (75%), Gaps = 2/207 (1%)
Strand=Plus/Plus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513
||||| | || ||||| ||||| || ||||| || | ||| | | | ||||| ||
Sbjct 542560 AAATGGAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTGCGGCCA-TCCTCCAG 542618
Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573
||||||||| ||| | ||||| ||||||||||| || ||||| || |||||||| |||
Sbjct 542619 CTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCAGGGGGGATTCCCTCCTTGTCCTGGAT 542678
Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633
||| ||| | | ||||| ||||||| |||||||| || | ||||| |||||| ||
Sbjct 542679 CTTGGCCTTCACGTTCTCAATGGTGTCGGATGGCTCCACCTCCAGGGTGATGGTTTTTCC 542738
Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660
||||| ||||| || || || |||||
Sbjct 542739 GGTCAAGGTTTTCACAAAGATTTGCAT 542765
Score = 132 bits (146), Expect = 5e-26
Identities = 155/207 (75%), Gaps = 2/207 (1%)
Strand=Plus/Plus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513
||||| | || ||||| ||||| || ||||| || | ||| | | | ||||| ||
Sbjct 543700 AAATGGAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTGCGGCCA-TCCTCCAG 543758
Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573
||||||||| ||| | ||||| ||||||||||| || ||||| || |||||||| |||
Sbjct 543759 CTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCAGGGGGGATTCCCTCCTTGTCCTGGAT 543818
Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633
||| ||| | | ||||| ||||||| |||||||| || | ||||| |||||| ||
Sbjct 543819 CTTGGCCTTCACGTTCTCAATGGTGTCGGATGGCTCCACCTCCAGGGTGATGGTTTTTCC 543878
Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660
||||| ||||| || || || |||||
Sbjct 543879 GGTCAAGGTTTTCACAAAGATTTGCAT 543905
Score = 127 bits (140), Expect = 2e-24
Identities = 154/207 (74%), Gaps = 2/207 (1%)
Strand=Plus/Plus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513
||||| | || ||||| ||||| || ||||| || | ||| | | | ||||| ||
Sbjct 543016 AAATGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTGCGGCCA-TCCTCCAG 543074
Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573
|||||| || ||| | ||||| ||||||||||| || ||||| || |||||||| |||
Sbjct 543075 CTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCTGGGGGGATTCCCTCCTTGTCCTGGAT 543134
Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633
||| ||| | | ||||| ||||||| |||||||| || | ||||| |||||| ||
Sbjct 543135 CTTGGCCTTCACGTTCTCAATGGTGTCGGATGGCTCCACCTCCAGGGTGATGGTTTTTCC 543194
Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660
||||| ||||| || || || |||||
Sbjct 543195 GGTCAAGGTTTTCACAAAGATTTGCAT 543221
Score = 127 bits (140), Expect = 2e-24
Identities = 154/207 (74%), Gaps = 2/207 (1%)
Strand=Plus/Plus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513
||||| | || ||||| ||||| || ||||| || | ||| | | | ||||| ||
Sbjct 544156 AAATGGAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTGCGGCCA-TCCTCCAG 544214
Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573
|||||||| ||| | ||||| ||||||||||| || ||||| || |||||||| |||
Sbjct 544215 TTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCTGGGGGGATTCCCTCCTTGTCCTGGAT 544274
Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633
||| ||| | | ||||| ||||||| |||||||| || | ||||| |||||| ||
Sbjct 544275 CTTGGCCTTCACGTTCTCAATGGTGTCGGATGGCTCCACCTCCAGGGTGATGGTTTTTCC 544334
Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660
|||| ||||| || || ||||||||
Sbjct 544335 AGTCAAGGTTTTCACAAAGATCTGCAT 544361
Score = 105 bits (116), Expect = 6e-18
Identities = 149/207 (72%), Gaps = 2/207 (1%)
Strand=Plus/Plus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513
||||| | || ||||| ||||| || ||||| || | ||| | | | || || ||
Sbjct 542332 AAATGGAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTGCGGCCA-TCTTCCAG 542390
Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573
||||||||| ||| | ||||| ||||||||||| || ||||| || |||||||| ||
Sbjct 542391 CTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCTGGGGGGATTCCCTCCTTGTCCTGAAT 542450
Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633
||| || | | ||||| ||||| | || || || || | ||| | ||||| ||
Sbjct 542451 CTTGGCTTTCACGTTCTCAATGGTGTCAGAAGGTTCGACCTCCAGGGTAATAGTTTTTCC 542510
Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660
|||||||| || |||||||| |||||
Sbjct 542511 AGTCAGAGTCTTCACGAAAATTTGCAT 542537
>seq12
Length=1235759
Score = 132 bits (146), Expect = 5e-26
Identities = 155/207 (75%), Gaps = 2/207 (1%)
Strand=Plus/Minus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513
|| || | ||| ||||| ||||| || ||||| ||| || ||| | | | ||||| ||
Sbjct 219373 AAGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGGCCA-TCCTCCAG 219315
Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573
||||||||| ||| | || || |||||||| || || || ||||| |||||||| |||
Sbjct 219314 CTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGGGGAATGCCCTCCTTGTCCTGGAT 219255
Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633
||| ||||| | ||| | ||||| | |||||| || || | ||||| ||| |||||
Sbjct 219254 CTTAGCCTTGACATTCTCGATGGTGTCAGAGGGCTCGACCTCCAAGGTGATGGTCTTGCC 219195
Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660
|| |||||||| ||||| || |||||
Sbjct 219194 AGTGAGAGTTTTCACGAAGATTTGCAT 219168
>seq7
Length=13333775
Score = 129 bits (142), Expect = 6e-25
Identities = 233/338 (69%), Gaps = 7/338 (2%)
Strand=Plus/Plus
Query 116467 GGCCTGCACGGCTTCCACGTGCACGAGTTTGGCGACACCAGCAACGGCTGCACCTCCGCC 116526
|| |||||||| ||||| ||||||||||| || |||| || ||||||||||| || ||
Sbjct 10666199 GGACTGCACGGATTCCATGTGCACGAGTTCGGGGACAACACCAACGGCTGCATGTCGTCC 10666258
Query 116527 GGCGAACACTTCAACCCCACCGG--CCAGGACCACGGCGCGCCCAACGCCGCCGTTCGTC 116584
||| ||||| ||||| |||| | |||| ||||| || |||| || || || |
Sbjct 10666259 GGCCCCCACTTTAACCC--CCGGAACAAGGAGCACGGTGCCCCCACCGACGAGAACCGCC 10666316
Query 116585 ACGTCGGTGACCTGGGCAACATTGAGGCCAAAGTGTCCAACGCGCTCACTGCCGTGGACA 116644
|| | || ||| |||||||||| |||| || || | ||| ||||| ||
Sbjct 10666317 ACTTGGGCGACTTGGGCAACATCCAGGC---AGCCGGTGACAGCCCCACGGCCGTCAGCA 10666373
Query 116645 AGATCGACAACGTGATGACGCTGTTCGGCGAGTACAGCGTGCTCGGTCGCAGTCTCGTCG 116704
| |||| ||| ||||||||||| | | ||| | | || |||| | ||||
Sbjct 10666374 TCACCGACTCGAAGATCACGCTGTTCGGTGCCGATAGCATCATAGGACGCACCGTGGTCG 10666433
Query 116705 TGCACACCAACGCCGACGACCTGGGACTGGGCCAGCACCCGCTTAGCAAAACCACCGGCA 116764
| ||| || |||| || ||| |||| ||| ||| ||| ||||| ||||||||||
Sbjct 10666434 TTCACGCCGACGCTGATGACTTGGGCAAGGGTGGTCACGAGCTAAGCAAGACCACCGGCA 10666493
Query 116765 ACTCGGGCGGCCGCCTCGGCTGCGGCATTATCGGCATT 116802
| | |||| ||| | |||||||| | || ||||||
Sbjct 10666494 ATGCCGGCGCCCGTATTGGCTGCGGTGTCATTGGCATT 10666531
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 483391855179600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |