Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20pseudoobscura_20pseudoobscura_20[refseq_20GCF_5F0000017 65.3_202013-04-11] 4,790 sequences; 152,696,384 total letters Query= NC_027348.2 Length=73882 Score E Sequences producing significant alignments: (Bits) Value seq15 82.4 4e-11 >seq15 Length=6594820 Score = 82.4 bits (90), Expect = 4e-11 Identities = 57/65 (88%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 21692 TATCAGCGCAGCGCTGACATGTTCCTGGGCGTGCCCTTCAACATCGCCAGCTACGCGCTG 21751 |||||||||||||| |||||| ||| |||||||| |||||||||||| |||||| ||| Sbjct 4185789 TATCAGCGCAGCGCCGACATGGGCCTTGGCGTGCCATTCAACATCGCCTCCTACGCCCTG 4185848 Query 21752 CTGAC 21756 ||||| Sbjct 4185849 CTGAC 4185853 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 236283805389170