Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20pseudoobscura_20pseudoobscura_20[refseq_20GCF_5F0000017
65.3_202013-04-11] 4,790 sequences; 152,696,384 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq15 187 3e-42
seq6 170 2e-37
seq3 158 1e-33
seq4631 150 2e-31
seq12 150 2e-31
seq10 89.7 6e-13
>seq15
Length=6594820
Score = 187 bits (206), Expect = 3e-42
Identities = 309/444 (70%), Gaps = 4/444 (1%)
Strand=Plus/Plus
Query 31961 AGCGGTCCATTCCACACGTGGCGGACGGCCTCAAGCCTTCACAGCGCAAGGTGATATACG 32020
|||| ||||| || | ||| ||| ||||| ||||| ||||||||||| || | |
Sbjct 6045574 AGCGCTCCATCCCCAGCCTGGTGGATGGCCTGAAGCCGGGCCAGCGCAAGGTCATGTTCA 6045633
Query 32021 CCTGCCTCAAGAAGAACCTGTCGAGTGACATGAAGGTGGCGCAGCTGTCGGGCTACGTGG 32080
| ||| ||||| ||| | | || | |||||||| |||||||| |||| |||||
Sbjct 6045634 CTTGCTTCAAGCGCAACGACAAGCGCGAGGTAAAGGTGGCCCAGCTGTCTGGCTCCGTGG 6045693
Query 32081 CAGAGCAAACGGCCTATCACCACGGCGAGGCGTCGCTCCAGGGCACCATTGTCAACCTTG 32140
| ||| ||||||| ||||||||||||| || |||||| || || || || || |
Sbjct 6045694 CGGAGATGTCGGCCTACCACCACGGCGAGGTCTCCCTCCAGATGACTATCGTGAATCTGG 6045753
Query 32141 CTCAGAACTTTGTCGGTGCAAATAACCTGAACTTACTCGAGCCATCTGGACAGTTTGGGA 32200
| ||||||| || ||| | || ||| | ||||| || ||||| || ||||| || |
Sbjct 6045754 CCCAGAACTACGTTGGTTCGAACAACATAAACTTGCTGGAGCCGCGCGGTCAGTTCGGTA 6045813
Query 32201 CCCGGCTCGCCGGTGGCAAGGATGCTGCGAGCTCCCGTTACATCTTCACCC--GTCTCGC 32258
| ||||| | || |||||||| ||| ||| | |||||||| ||||| | | ||||
Sbjct 6045814 CTCGGCTGACGGGCGGCAAGGACTGTGCCAGCGCTCGTTACATTTTCACACTGATGTCGC 6045873
Query 32259 ACCTTCGACGCGCAAGATTTTCGACCCGTCGGACGATGCGGTGCTCAAGTACAATTTTGA 32318
|| ||||||| || | | |||| ||||||| || |||| ||||| | ||
Sbjct 6045874 CGCT--GACGCGCCTCATCTACCACCCCCTGGACGATCCGCTGCTGGAGTACCAGACCGA 6045931
Query 32319 TGACGGTCAGCGGGTCGAGCCGGTGTTCTACAGTCCGGTGCTTCCGATGATCTTGGTGAA 32378
|| || ||| || ||||||| ||| || || | | |||||| | |||||||
Sbjct 6045932 CGATGGCCAGAGGATCGAGCCATTGTGGTATCTGCCCATCATACCGATGGTTCTGGTGAA 6045991
Query 32379 CGGTGCAGAAGGCATCGGAACGGG 32402
||| || || |||||||| || ||
Sbjct 6045992 CGGAGCCGAGGGCATCGGCACTGG 6046015
>seq6
Length=9197557
Score = 170 bits (188), Expect = 2e-37
Identities = 174/227 (77%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||||||||| || || | ||||| || || || || || ||||| ||| ||
Sbjct 544133 ATGCAAATCTTTGTGAAAACCTTGACCGGAAAAACCATCACCCTGGAGGTGGAGCCATCC 544074
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||||| || | ||||| || || ||||||||||||||||| ||||||||||||
Sbjct 544073 GACACCATTGAGAACGTAAAGGCCAAGATCCAGGACAAGGAGGGAATCCCTCCAGACCAG 544014
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|||||||| || || || || ||||| || ||||||| || || || | ||||| ||
Sbjct 544013 CAGCGTCTCATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGCACTCTTTCTGACTACAAC 543954
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| ||||| || ||||| ||| | || ||||||| ||||||||
Sbjct 543953 ATCCAGAAGGAGTCGACTCTCCATTTGGTGCTGCGTCTCCGCGGTGG 543907
Score = 170 bits (188), Expect = 2e-37
Identities = 182/239 (76%), Gaps = 1/239 (0%)
Strand=Plus/Minus
Query 27394 AATATTACTATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAG 27453
|||| ||| | |||||| |||||||| || || | || || || || || || || |||
Sbjct 544372 AATAATACAA-AATGCAGATCTTTGTGAAAACCTTGACTGGAAAAACCATCACCCTGGAG 544314
Query 27454 GTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATT 27513
|| ||| || || | ||||| || ||||||| || || |||||||||||||||||
Sbjct 544313 GTGGAGCCATCCGACACCATTGAGAACGTGAAGGCCAAGATCCAGGACAAGGAGGGAATC 544254
Query 27514 CCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTA 27573
|| ||||||||||||||||| || || || || |||||||| ||||||| || || ||
Sbjct 544253 CCCCCAGACCAGCAGCGTCTCATCTTCGCCGGCAAGCAACTGGAGGATGGCCGCACTCTT 544194
Query 27574 GCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| ||||| || |||| ||||| || ||||| ||| | || ||||||| ||||||||
Sbjct 544193 TCGGACTACAACATCCAGAAGGAGTCGACTCTCCATTTGGTGCTGCGTCTCCGCGGTGG 544135
Score = 167 bits (184), Expect = 3e-36
Identities = 173/227 (76%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||||||||| || || | ||||| || || || || || ||||| ||| ||
Sbjct 542765 ATGCAAATCTTTGTGAAAACCTTGACCGGAAAAACCATCACCCTGGAGGTGGAGCCATCC 542706
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||||| || ||||||| || || ||||||||||||||||| || || ||||||
Sbjct 542705 GACACCATTGAGAACGTGAAGGCCAAGATCCAGGACAAGGAGGGAATCCCCCCTGACCAG 542646
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|||||||| || || || || ||||| || ||||||| || || || | ||||| ||
Sbjct 542645 CAGCGTCTCATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGCACTCTTTCGGACTACAAC 542586
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| ||||| || ||||| ||| | || ||||||| ||||||||
Sbjct 542585 ATCCAGAAGGAGTCGACTCTCCATTTGGTGCTGCGTCTCCGCGGTGG 542539
Score = 167 bits (184), Expect = 3e-36
Identities = 173/227 (76%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||||||||| || || | ||||| || || || || || ||||| ||| ||
Sbjct 543221 ATGCAAATCTTTGTGAAAACCTTGACCGGAAAAACCATCACCCTGGAGGTGGAGCCATCC 543162
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||||| || ||||||| || || ||||||||||||||||| || |||||||||
Sbjct 543161 GACACCATTGAGAACGTGAAGGCCAAGATCCAGGACAAGGAGGGAATCCCCCCAGACCAG 543102
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|||||||| || || || || ||||| || ||||||| || || || | ||||| ||
Sbjct 543101 CAGCGTCTCATCTTCGCCGGAAAGCAGCTGGAGGATGGCCGCACTCTTTCGGACTACAAC 543042
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| ||||| || ||||| ||| | || | ||||| ||||||||
Sbjct 543041 ATCCAGAAGGAGTCGACTCTGCATTTGGTGCTTCGTCTCCGCGGTGG 542995
Score = 167 bits (184), Expect = 3e-36
Identities = 173/227 (76%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||||||||| || || | ||||| || || || || || ||||| ||| ||
Sbjct 543905 ATGCAAATCTTTGTGAAAACCTTGACCGGAAAAACCATCACCCTGGAGGTGGAGCCATCC 543846
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||||| || ||||||| || || ||||||||||||||||| || || ||||||
Sbjct 543845 GACACCATTGAGAACGTGAAGGCCAAGATCCAGGACAAGGAGGGAATCCCCCCTGACCAG 543786
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|||||||| || || || || ||||| || ||||||| || || || | ||||| ||
Sbjct 543785 CAGCGTCTCATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGCACTCTTTCGGACTACAAC 543726
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| ||||| || ||||| ||| | || ||||||| ||||||||
Sbjct 543725 ATCCAGAAGGAGTCGACTCTCCATTTGGTGCTGCGTCTCCGCGGTGG 543679
Score = 163 bits (180), Expect = 3e-35
Identities = 173/228 (76%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| || || ||||| || || || || |||||||| || ||||| || | |
Sbjct 542537 ATGCAAATTTTCGTGAAGACTCTGACTGGAAAAACTATTACCCTGGAGGTCGAACCTTCT 542478
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||||| || |||| || || |||||||||||||||||||| || |||||||||
Sbjct 542477 GACACCATTGAGAACGTGAAAGCCAAGATTCAGGACAAGGAGGGAATCCCCCCAGACCAG 542418
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|||||||| || || ||||| ||||| || || |||| || || || | ||||| ||
Sbjct 542417 CAGCGTCTCATCTTCGCTGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCGGACTACAAC 542358
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633
|||| ||||| || ||||| ||| | || ||||||| || || |||
Sbjct 542357 ATCCAGAAGGAGTCGACTCTCCATTTGGTGCTGCGTCTCCGTGGCGGA 542310
Score = 161 bits (178), Expect = 1e-34
Identities = 172/227 (76%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| ||||| || || | ||||| || || || || || ||||| ||| ||
Sbjct 542993 ATGCAAATTTTTGTGAAAACCTTGACCGGAAAAACCATCACCCTGGAGGTGGAGCCATCC 542934
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||||| || ||||||| || || ||||||||||||||||| || |||||||||
Sbjct 542933 GACACCATTGAGAACGTGAAGGCCAAGATCCAGGACAAGGAGGGAATCCCCCCAGACCAG 542874
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|||||||| || || || || ||||| || ||||||| || || || | ||||| ||
Sbjct 542873 CAGCGTCTCATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGCACTCTTTCGGACTACAAC 542814
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| ||||| || ||||| ||| | || | ||||| ||||||||
Sbjct 542813 ATCCAGAAGGAGTCGACTCTGCATTTGGTGCTTCGTCTCCGCGGTGG 542767
Score = 161 bits (178), Expect = 1e-34
Identities = 172/227 (76%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| ||||| || ||||| || || || || || || || || ||||| ||| ||
Sbjct 543677 ATGCAGATCTTCGTGAAGACTCTGACTGGAAAAACCATCACCCTGGAGGTGGAGCCATCC 543618
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||||| || ||||||| || || ||||||||||||||||| || || ||||||
Sbjct 543617 GACACCATTGAGAACGTGAAGGCCAAGATCCAGGACAAGGAGGGAATCCCCCCTGACCAG 543558
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|||||||| || || || || ||||| || ||||||| || || || | ||||| ||
Sbjct 543557 CAGCGTCTCATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGCACTCTTTCGGACTACAAC 543498
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| ||||| || ||||| ||| | || ||||||| ||||||||
Sbjct 543497 ATCCAGAAGGAGTCGACTCTCCATTTGGTGCTGCGTCTCCGCGGTGG 543451
Score = 158 bits (174), Expect = 1e-33
Identities = 171/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| ||||| || || | ||||| || || || || || ||||| ||| ||
Sbjct 543449 ATGCAAATTTTTGTGAAAACCTTGACCGGAAAAACCATCACCCTGGAGGTGGAGCCATCC 543390
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||||| || ||||||| || || ||||||||||||||||| || || ||||||
Sbjct 543389 GACACCATTGAGAACGTGAAGGCCAAGATCCAGGACAAGGAGGGAATCCCCCCTGACCAG 543330
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|||||||| || || || || ||||| || ||||||| || || || | ||||| ||
Sbjct 543329 CAGCGTCTCATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGCACTCTTTCGGACTACAAC 543270
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| ||||| || ||||| ||| | || | ||||| ||||||||
Sbjct 543269 ATCCAGAAGGAGTCGACTCTGCATTTGGTGCTTCGTCTCCGCGGTGG 543223
>seq3
Length=12541198
Score = 158 bits (174), Expect = 1e-33
Identities = 171/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| |||||||||||||| || || ||||||||||| || || ||||| ||| |
Sbjct 3174113 ATGCAGATCTTTGTCAAGACTCTGACTGGCAAGACTATCACCCTCGAGGTCGAGCCCTCG 3174172
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||| | ||| | |||||||| || |||||||||||||| ||||| ||||| |||
Sbjct 3174173 GACACCATCGAGAATGTCAAGGCTAAGATCCAGGACAAGGAGGGCATTCCCCCAGATCAG 3174232
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|||||| | || || || || ||||| || ||||| | ||||| | | ||||| ||
Sbjct 3174233 CAGCGTTTGATCTTCGCCGGCAAGCAGCTGGAGGACGGACGTACTTTGTCCGACTACAAC 3174292
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| ||||| ||||| | ||| | || | || || ||||||||
Sbjct 3174293 ATCCAGAAGGAGTCCACCTTGCATTTGGTGCTCCGCCTGCGCGGTGG 3174339
Score = 158 bits (174), Expect = 1e-33
Identities = 171/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| |||||||||||||| || || |||||||| || || || ||||| ||| |
Sbjct 3175709 ATGCAGATCTTTGTCAAGACTCTGACTGGCAAGACCATCACCCTCGAGGTCGAGCCCTCG 3175768
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||| | ||| | |||||||| || |||||||||||||| ||||| ||||| |||
Sbjct 3175769 GACACCATCGAGAATGTCAAGGCTAAGATCCAGGACAAGGAGGGCATTCCCCCAGATCAG 3175828
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|||||| | || || || || ||||| || ||||| | ||||| | | || || ||
Sbjct 3175829 CAGCGTTTGATCTTCGCCGGCAAGCAGCTGGAGGACGGACGTACTTTGTCCGATTACAAC 3175888
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| ||||| |||||| | || | || ||||||||||| || ||
Sbjct 3175889 ATCCAGAAGGAGTCCACTTTGCACTTGGTATTGCGTCTTCGTGGCGG 3175935
Score = 152 bits (168), Expect = 6e-32
Identities = 170/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| |||||||||||||| || || |||||||| || || || ||||| ||| |
Sbjct 3174797 ATGCAGATCTTTGTCAAGACTCTGACTGGCAAGACCATCACCCTCGAGGTCGAGCCCTCG 3174856
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||| | ||| | |||||||| || |||||||||||||| ||||| ||||| |||
Sbjct 3174857 GACACCATCGAGAATGTCAAGGCTAAGATCCAGGACAAGGAGGGCATTCCCCCAGATCAG 3174916
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|||||| | || || || || ||||| || ||||| | ||||| | | ||||| ||
Sbjct 3174917 CAGCGTTTGATCTTCGCCGGCAAGCAGCTGGAGGACGGACGTACTTTGTCCGACTACAAC 3174976
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| ||||| ||||| | ||| | || | || || ||||||||
Sbjct 3174977 ATCCAGAAGGAGTCCACCTTGCATTTGGTGCTCCGCCTGCGCGGTGG 3175023
Score = 152 bits (168), Expect = 6e-32
Identities = 170/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| |||||||||||||| || || |||||||| || || || ||||| ||| |
Sbjct 3175481 ATGCAGATCTTTGTCAAGACTCTGACTGGCAAGACCATCACCCTCGAGGTCGAGCCCTCG 3175540
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||| | ||| | |||||||| || |||||||||||||| ||||| ||||| |||
Sbjct 3175541 GACACCATCGAGAATGTCAAGGCTAAGATCCAGGACAAGGAGGGCATTCCCCCAGATCAG 3175600
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|||||| | || || || || ||||| || ||||| | ||||| | | ||||| ||
Sbjct 3175601 CAGCGTTTGATCTTCGCCGGCAAGCAGCTGGAGGACGGACGTACTTTGTCCGACTACAAC 3175660
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| ||||| ||||| | ||| | || | || || ||||||||
Sbjct 3175661 ATCCAGAAGGAGTCCACCTTGCATTTGGTGCTCCGCCTGCGCGGTGG 3175707
Score = 149 bits (164), Expect = 7e-31
Identities = 169/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| |||||||||||||| || || |||||||| || || || ||||| ||| |
Sbjct 3174341 ATGCAGATCTTTGTCAAGACTCTGACTGGCAAGACCATCACCCTCGAGGTCGAGCCCTCG 3174400
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||| | ||| | |||||||| || |||||||||||||| ||||| ||||| |||
Sbjct 3174401 GACACCATCGAGAATGTCAAGGCTAAGATCCAGGACAAGGAGGGCATTCCCCCAGATCAG 3174460
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|||||| | || || || || ||||| || ||||| | ||||| | | || || ||
Sbjct 3174461 CAGCGTTTGATCTTCGCCGGCAAGCAGCTGGAGGACGGACGTACTTTGTCCGATTACAAC 3174520
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| ||||| ||||| | ||| | || | || || ||||||||
Sbjct 3174521 ATCCAGAAGGAGTCCACCTTGCATTTGGTGCTCCGCCTGCGCGGTGG 3174567
Score = 149 bits (164), Expect = 7e-31
Identities = 169/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| |||||||||||||| || || |||||||| || || || ||||| ||| |
Sbjct 3174569 ATGCAGATCTTTGTCAAGACTCTGACTGGCAAGACCATCACCCTCGAGGTCGAGCCCTCG 3174628
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||| | ||| | |||||||| || |||||||||||||| ||||| ||||| |||
Sbjct 3174629 GACACCATCGAGAATGTCAAGGCTAAGATCCAGGACAAGGAGGGCATTCCCCCAGATCAG 3174688
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|||||| | || || || || ||||| || ||||| | ||||| | | || || ||
Sbjct 3174689 CAGCGTTTGATCTTCGCCGGCAAGCAGCTGGAGGACGGACGTACTTTGTCCGATTACAAC 3174748
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| ||||| ||||| | ||| | || | || || ||||||||
Sbjct 3174749 ATCCAGAAGGAGTCCACCTTGCATTTGGTGCTCCGCCTGCGCGGTGG 3174795
Score = 145 bits (160), Expect = 9e-30
Identities = 169/228 (74%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
|||||| ||||| || ||||| || || |||||||| || || || ||||||||| |
Sbjct 3173884 AATGCAGATCTTCGTGAAGACCCTGACTGGCAAGACCATCACCCTCGAGGTTGAGCCCTC 3173943
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
|| | ||| | ||| | ||||| || || |||||||||||||| ||||| ||||| ||
Sbjct 3173944 GGACACCATCGAGAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCAGATCA 3174003
Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584
||||||| | || || || || ||||| || ||||| | |||||| | | || || ||
Sbjct 3174004 GCAGCGTTTGATCTTCGCCGGCAAGCAGCTGGAGGACGGACGTACCTTGTCCGATTACAA 3174063
Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| ||||| ||||| | ||| | || | || || ||||||||
Sbjct 3174064 CATCCAGAAGGAGTCCACCTTGCATTTGGTGCTCCGCCTGCGCGGTGG 3174111
Score = 143 bits (158), Expect = 3e-29
Identities = 168/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| |||||||||||||| || || |||||||| || || || ||||| ||| |
Sbjct 3175025 ATGCAGATCTTTGTCAAGACTCTGACTGGCAAGACCATCACCCTCGAGGTCGAGCCCTCG 3175084
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||| | ||| | |||||||| || |||||||||||||| ||||| ||||| |||
Sbjct 3175085 GACACCATCGAGAATGTCAAGGCTAAGATCCAGGACAAGGAGGGCATTCCCCCAGATCAG 3175144
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|||||| | || || || || ||||| || ||||| | ||||| | | ||||| ||
Sbjct 3175145 CAGCGTTTGATCTTCGCCGGCAAGCAGCTGGAGGACGGACGTACTTTGTCCGACTACAAC 3175204
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| ||||| || || || || | || | || || ||||| ||
Sbjct 3175205 ATCCAGAAGGAGTCGACCCTCCACTTGGTGCTCCGCCTGCGCGGAGG 3175251
Score = 140 bits (154), Expect = 4e-28
Identities = 167/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| ||||| || ||||| || || |||||||| || || || ||||| ||| |
Sbjct 3175253 ATGCAGATCTTCGTGAAGACTCTGACTGGCAAGACCATCACCCTCGAGGTCGAGCCCTCG 3175312
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||| | ||| | |||||||| || |||||||||||||| ||||| ||||| |||
Sbjct 3175313 GACACCATCGAGAATGTCAAGGCTAAGATCCAGGACAAGGAGGGCATTCCCCCAGATCAG 3175372
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|||||| | || || || || ||||| || ||||| | ||||| | | || || ||
Sbjct 3175373 CAGCGTTTGATCTTCGCCGGCAAGCAGCTGGAGGACGGACGTACTTTGTCCGATTACAAC 3175432
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| ||||| ||||| | ||| | || | || || ||||||||
Sbjct 3175433 ATCCAGAAGGAGTCCACCTTGCATTTGGTGCTCCGCCTGCGCGGTGG 3175479
>seq4631
Length=7852
Score = 150 bits (166), Expect = 2e-31
Identities = 170/228 (75%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| |||||||| ||||| || || |||||||| || ||||||||||| || |
Sbjct 489 ATGCAGATCTTTGTAAAGACCCTAACGGGCAAGACCATAACTCTTGAGGTCGAACCGTCG 548
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| ||| | |||| | || || || || |||||||| || |||||||||||||| ||
Sbjct 549 GATACCATCGAAAATGTCAAAGCCAAGATCCAGGACAAAGAAGGAATTCCTCCAGATCAA 608
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|||||| | || || ||||| |||||| | || |||| || || || | || |||||
Sbjct 609 CAGCGTTTGATCTTCGCTGGCAAGCAATTGGAAGATGGCCGAACACTGTCTGATTATAAC 668
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633
| || ||||| || || | ||| |||| | || ||||| ||||||
Sbjct 669 ATTCAGAAGGAGTCTACCTTGCATTTAGTACTTCGGCTTCGTGGTGGA 716
>seq12
Length=1235759
Score = 150 bits (166), Expect = 2e-31
Identities = 170/228 (75%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
|||||||||||| || || || || || |||||||| || || | ||||| ||| |
Sbjct 219167 AATGCAAATCTTCGTGAAAACTCTCACTGGCAAGACCATCACCTTGGAGGTCGAGCCCTC 219226
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
||| | ||| | ||| | |||||||| || |||||||||||||| ||||| ||||| ||
Sbjct 219227 TGACACCATCGAGAATGTCAAGGCTAAGATCCAGGACAAGGAGGGCATTCCCCCAGATCA 219286
Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584
||||||||| || || || || ||||| || ||||||| || || || | ||||| ||
Sbjct 219287 GCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGCACTCTGTCCGACTACAA 219346
Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| ||||| || || || || | || | || || ||||||||
Sbjct 219347 CATCCAGAAGGAGTCGACCCTGCACTTGGTGCTCCGCCTGCGCGGTGG 219394
>seq10
Length=19787792
Score = 89.7 bits (98), Expect = 6e-13
Identities = 169/246 (69%), Gaps = 7/246 (3%)
Strand=Plus/Minus
Query 64628 TGTTCAGGGCTATAGAGACTGTACCCGCTGTTACTAAAAAGGCTGAATGGGCCATCCGGT 64687
|||||| ||||| ||||| | || ||||| | ||||| || |||||||| |
Sbjct 12208277 TGTTCAATGCTATTGAGACCATGCCGGCTGTAAAGCGCAAGGCGGACTGGGCCATGTCCT 12208218
Query 64688 GGATGAATCGTGGG--TCGTCG---TTTGGTCAGCGTCTCGCAGCTTTTGCCTGTGTGGA 64742
|||| ||| | | ||| | |||| ||||| | || ||||| |||||
Sbjct 12208217 GGAT--ATCCTCGAAATCGGCCAACTTTGCCGAGCGTATTATTGCCTTTGCGGCCGTGGA 12208160
Query 64743 AGGAATTTTCTTTTCTGGGTCATTCTGTTCTATTTTCTGGCTAAAAAAGCGGGGCCTGAT 64802
|||||| |||||| ||| || || || || ||||| || ||||| || || ||
Sbjct 12208159 AGGAATCTTCTTTAGTGGCAGCTTTGCCTCGATCTTTTGGCTGAAGAAGCGTGGTCTCAT 12208100
Query 64803 GCCAGGTCTGTCGTTTTCGAACGAGCTGATCTCTCGGGACGAGGGGCTCCACCAAGAATT 64862
||| |||||| | || || |||||||||||||| || ||||| || || ||| || ||
Sbjct 12208099 GCCCGGTCTGACCTTCTCCAACGAGCTGATCTCCCGTGACGAAGGTCTTCACTGCGACTT 12208040
Query 64863 TGCGGT 64868
||||||
Sbjct 12208039 TGCGGT 12208034
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570276252664800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |