Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20pseudoobscura_20pseudoobscura_20[refseq_20GCF_5F0000017 65.3_202013-04-11] 4,790 sequences; 152,696,384 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq4631 165 7e-36 seq10 165 7e-36 seq3 159 3e-34 seq6 131 1e-25 seq12 122 8e-23 >seq4631 Length=7852 Score = 165 bits (182), Expect = 7e-36 Identities = 174/229 (76%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 26986 CCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGT 27045 |||||||||| |||||||| || || || |||||| | || |||||||| || ||||||| Sbjct 487 CCATGCAGATCTTTGTAAAGACCCTAACGGGCAAGACCATAACTCTTGAGGTCGAACCGT 546 Query 27046 CCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATC 27105 | || | || || | |||||| || || || ||||||||||| || || || |||| Sbjct 547 CGGATACCATCGAAAATGTCAAAGCCAAGATCCAGGACAAAGAAGGAATTCCTCCAGATC 606 Query 27106 AACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACA 27165 |||||||||| || | ||| ||||| ||||||||||| | || | || ||||| | Sbjct 607 AACAGCGTTTGATCTTCGCTGGCAAGCAATTGGAAGATGGCCGAACACTGTCTGATTATA 666 Query 27166 ACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 ||||||| |||||||| ||||| ||||| || | || | || ||||| Sbjct 667 ACATTCAGAAGGAGTCTACCTTGCATTTAGTACTTCGGCTTCGTGGTGG 715 >seq10 Length=19787792 Score = 165 bits (182), Expect = 7e-36 Identities = 203/277 (73%), Gaps = 3/277 (1%) Strand=Plus/Minus Query 135465 ATGACCCGTTGTGGAACGCGGCACAACGGCAGCTTAAGCGAGAAGGCAAAATGCACGGAT 135524 |||||| |||||||| | || || | |||||| ||| || ||||| |||||||||| Sbjct 8707806 ATGACC---TGTGGAACTCTGCCCAGCTGCAGCTGGTGCGGGAGGGCAAGATGCACGGAT 8707750 Query 135525 TTATGCGCATGTATTGGGCAAAAAAGATATTGGAATGGTCTGCATCGCCTGCAGAGGCGC 135584 || |||||||||| ||||| || || ||| | || ||| | || |||| | |||||| Sbjct 8707749 TTCTGCGCATGTACTGGGCCAAGAAAATACTCGAGTGGACGGCCACGCCGGAGCAGGCGC 8707690 Query 135585 TACAACACGCAATATTTTTTAATGATTACTACAGTTTAGATGGACGCGATTCAAATGGCT 135644 | | |||| || | | || || | ||||| |||| || |||||| | ||||||| Sbjct 8707689 TGGAGTACGCGATCCTGCTGAACGACAAGTACAGCCTAGACGGGCGCGATCCCAATGGCT 8707630 Query 135645 ACGTAGGTTGTATGTGGTCTATTTGCGGTGTACACGATCAAGGATGGAAGGAGCGCAAAG 135704 | || || || |||||||||||| | || |||||||| || ||||||||||| Sbjct 8707629 ATGTGGGCTGCATGTGGTCTATTGGGGGCATACACGATATGGGCTGGAAGGAGCGTGCGA 8707570 Query 135705 TGTTTGGCAAGATTCGCTATATGAACTATGACGGTTG 135741 | || || ||||||||||| ||||||||| | || || Sbjct 8707569 TATTCGGAAAGATTCGCTACATGAACTATCAAGGATG 8707533 >seq3 Length=12541198 Score = 159 bits (176), Expect = 3e-34 Identities = 174/231 (75%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||| ||||| || |||||||| |||||| | || || || || || || || || Sbjct 3174340 CATGCAGATCTTTGTCAAGACTCTGACTGGCAAGACCATCACCCTCGAGGTCGAGCCCTC 3174399 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 ||| | || |||| ||||| || || || ||||| || ||||| || || ||||| Sbjct 3174400 GGACACCATCGAGAATGTCAAGGCTAAGATCCAGGACAAGGAGGGCATTCCCCCAGATCA 3174459 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 |||||||| || | ||||||||| || |||| ||| | || | ||||||||||| Sbjct 3174460 GCAGCGTTTGATCTTCGCCGGCAAGCAGCTGGAGGACGGACGTACTTTGTCCGATTACAA 3174519 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||| || |||||||| ||||| |||||||| | || |||| |||||||| Sbjct 3174520 CATCCAGAAGGAGTCCACCTTGCATTTGGTGCTCCGCCTGCGCGGTGGCAT 3174570 Score = 159 bits (176), Expect = 3e-34 Identities = 174/231 (75%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||| ||||| || |||||||| |||||| | || || || || || || || || Sbjct 3174568 CATGCAGATCTTTGTCAAGACTCTGACTGGCAAGACCATCACCCTCGAGGTCGAGCCCTC 3174627 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 ||| | || |||| ||||| || || || ||||| || ||||| || || ||||| Sbjct 3174628 GGACACCATCGAGAATGTCAAGGCTAAGATCCAGGACAAGGAGGGCATTCCCCCAGATCA 3174687 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 |||||||| || | ||||||||| || |||| ||| | || | ||||||||||| Sbjct 3174688 GCAGCGTTTGATCTTCGCCGGCAAGCAGCTGGAGGACGGACGTACTTTGTCCGATTACAA 3174747 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||| || |||||||| ||||| |||||||| | || |||| |||||||| Sbjct 3174748 CATCCAGAAGGAGTCCACCTTGCATTTGGTGCTCCGCCTGCGCGGTGGCAT 3174798 Score = 156 bits (172), Expect = 4e-33 Identities = 173/231 (75%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||| || || || |||||||| |||||| | || || || || || || || || Sbjct 3175252 CATGCAGATCTTCGTGAAGACTCTGACTGGCAAGACCATCACCCTCGAGGTCGAGCCCTC 3175311 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 ||| | || |||| ||||| || || || ||||| || ||||| || || ||||| Sbjct 3175312 GGACACCATCGAGAATGTCAAGGCTAAGATCCAGGACAAGGAGGGCATTCCCCCAGATCA 3175371 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 |||||||| || | ||||||||| || |||| ||| | || | ||||||||||| Sbjct 3175372 GCAGCGTTTGATCTTCGCCGGCAAGCAGCTGGAGGACGGACGTACTTTGTCCGATTACAA 3175431 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||| || |||||||| ||||| |||||||| | || |||| |||||||| Sbjct 3175432 CATCCAGAAGGAGTCCACCTTGCATTTGGTGCTCCGCCTGCGCGGTGGCAT 3175482 Score = 154 bits (170), Expect = 1e-32 Identities = 172/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || ||||| |||||| | || || || || || || || || Sbjct 3173885 ATGCAGATCTTCGTGAAGACCCTGACTGGCAAGACCATCACCCTCGAGGTTGAGCCCTCG 3173944 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || |||| ||||| || || || ||||| || ||||| || || ||||| Sbjct 3173945 GACACCATCGAGAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCAGATCAG 3174004 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||||| || | ||||||||| || |||| ||| | ||| | |||||||||||| Sbjct 3174005 CAGCGTTTGATCTTCGCCGGCAAGCAGCTGGAGGACGGACGTACCTTGTCCGATTACAAC 3174064 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || |||||||| ||||| |||||||| | || |||| |||||||| Sbjct 3174065 ATCCAGAAGGAGTCCACCTTGCATTTGGTGCTCCGCCTGCGCGGTGGCAT 3174114 Score = 152 bits (168), Expect = 4e-32 Identities = 171/229 (75%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||| ||||| || |||||||| |||||| | || || || || || || || || Sbjct 3175708 CATGCAGATCTTTGTCAAGACTCTGACTGGCAAGACCATCACCCTCGAGGTCGAGCCCTC 3175767 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 ||| | || |||| ||||| || || || ||||| || ||||| || || ||||| Sbjct 3175768 GGACACCATCGAGAATGTCAAGGCTAAGATCCAGGACAAGGAGGGCATTCCCCCAGATCA 3175827 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 |||||||| || | ||||||||| || |||| ||| | || | ||||||||||| Sbjct 3175828 GCAGCGTTTGATCTTCGCCGGCAAGCAGCTGGAGGACGGACGTACTTTGTCCGATTACAA 3175887 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGC 27215 ||| || |||||||| || || || ||||| |||||| | || || ||| Sbjct 3175888 CATCCAGAAGGAGTCCACTTTGCACTTGGTATTGCGTCTTCGTGGCGGC 3175936 Score = 147 bits (162), Expect = 2e-30 Identities = 171/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||| ||||| || |||||||| |||||| | || || || || || || || || Sbjct 3175024 CATGCAGATCTTTGTCAAGACTCTGACTGGCAAGACCATCACCCTCGAGGTCGAGCCCTC 3175083 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 ||| | || |||| ||||| || || || ||||| || ||||| || || ||||| Sbjct 3175084 GGACACCATCGAGAATGTCAAGGCTAAGATCCAGGACAAGGAGGGCATTCCCCCAGATCA 3175143 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 |||||||| || | ||||||||| || |||| ||| | || | ||||| ||||| Sbjct 3175144 GCAGCGTTTGATCTTCGCCGGCAAGCAGCTGGAGGACGGACGTACTTTGTCCGACTACAA 3175203 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||| || |||||||||||| | || ||||| | || |||| || ||||| Sbjct 3175204 CATCCAGAAGGAGTCGACCCTCCACTTGGTGCTCCGCCTGCGCGGAGGCAT 3175254 >seq6 Length=9197557 Score = 131 bits (144), Expect = 1e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || || |||||||| || || ||||||| || || || ||||| || Sbjct 542537 ATGCAAATTTTCGTGAAGACTCTGACTGGAAAAACTATTACCCTGGAGGTCGAACCTTCT 542478 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||||| || ||| || ||||| ||||| || || || || || || || Sbjct 542477 GACACCATTGAGAACGTGAAAGCCAAGATTCAGGACAAGGAGGGAATCCCCCCAGACCAG 542418 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | ||| ||||| || ||||||| | || |||| || |||||| Sbjct 542417 CAGCGTCTCATCTTCGCTGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCGGACTACAAC 542358 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 || || ||||||||||| | |||||||| ||||| | || || || Sbjct 542357 ATCCAGAAGGAGTCGACTCTCCATTTGGTGCTGCGTCTCCGTGGCGG 542311 Score = 131 bits (144), Expect = 1e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| ||||| |||| || || | || || || || ||||| || ||| Sbjct 544361 ATGCAGATCTTTGTGAAAACCTTGACTGGAAAAACCATCACCCTGGAGGTGGAGCCATCC 544302 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||||| || || || || || ||||| || || || || || || || Sbjct 544301 GACACCATTGAGAACGTGAAGGCCAAGATCCAGGACAAGGAGGGAATCCCCCCAGACCAG 544242 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | ||||||||| ||| |||| || | || |||| || |||||| Sbjct 544241 CAGCGTCTCATCTTCGCCGGCAAGCAACTGGAGGATGGCCGCACTCTTTCGGACTACAAC 544182 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || ||||||||||| | |||||||| ||||| | || ||||| || Sbjct 544181 ATCCAGAAGGAGTCGACTCTCCATTTGGTGCTGCGTCTCCGCGGTGGTAT 544132 Score = 127 bits (140), Expect = 2e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||| ||||| ||||||| || | || || || || ||||| || ||| Sbjct 542765 ATGCAAATCTTTGTGAAAACCTTGACCGGAAAAACCATCACCCTGGAGGTGGAGCCATCC 542706 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||||| || || || || || ||||| || || || || || || || Sbjct 542705 GACACCATTGAGAACGTGAAGGCCAAGATCCAGGACAAGGAGGGAATCCCCCCTGACCAG 542646 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | ||||||||| || |||| || | || |||| || |||||| Sbjct 542645 CAGCGTCTCATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGCACTCTTTCGGACTACAAC 542586 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || ||||||||||| | |||||||| ||||| | || ||||| || Sbjct 542585 ATCCAGAAGGAGTCGACTCTCCATTTGGTGCTGCGTCTCCGCGGTGGTAT 542536 Score = 127 bits (140), Expect = 2e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || |||||||| || || | || || || || ||||| || ||| Sbjct 543677 ATGCAGATCTTCGTGAAGACTCTGACTGGAAAAACCATCACCCTGGAGGTGGAGCCATCC 543618 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||||| || || || || || ||||| || || || || || || || Sbjct 543617 GACACCATTGAGAACGTGAAGGCCAAGATCCAGGACAAGGAGGGAATCCCCCCTGACCAG 543558 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | ||||||||| || |||| || | || |||| || |||||| Sbjct 543557 CAGCGTCTCATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGCACTCTTTCGGACTACAAC 543498 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || ||||||||||| | |||||||| ||||| | || ||||| || Sbjct 543497 ATCCAGAAGGAGTCGACTCTCCATTTGGTGCTGCGTCTCCGCGGTGGTAT 543448 Score = 127 bits (140), Expect = 2e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||| ||||| ||||||| || | || || || || ||||| || ||| Sbjct 543905 ATGCAAATCTTTGTGAAAACCTTGACCGGAAAAACCATCACCCTGGAGGTGGAGCCATCC 543846 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||||| || || || || || ||||| || || || || || || || Sbjct 543845 GACACCATTGAGAACGTGAAGGCCAAGATCCAGGACAAGGAGGGAATCCCCCCTGACCAG 543786 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | ||||||||| || |||| || | || |||| || |||||| Sbjct 543785 CAGCGTCTCATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGCACTCTTTCGGACTACAAC 543726 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || ||||||||||| | |||||||| ||||| | || ||||| || Sbjct 543725 ATCCAGAAGGAGTCGACTCTCCATTTGGTGCTGCGTCTCCGCGGTGGTAT 543676 Score = 127 bits (140), Expect = 2e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||| ||||| ||||||| || | || || || || ||||| || ||| Sbjct 544133 ATGCAAATCTTTGTGAAAACCTTGACCGGAAAAACCATCACCCTGGAGGTGGAGCCATCC 544074 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||||| || || || || || ||||| || || || || || || || Sbjct 544073 GACACCATTGAGAACGTAAAGGCCAAGATCCAGGACAAGGAGGGAATCCCTCCAGACCAG 544014 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | ||||||||| || |||| || | || |||| || |||||| Sbjct 544013 CAGCGTCTCATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGCACTCTTTCTGACTACAAC 543954 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || ||||||||||| | |||||||| ||||| | || ||||| || Sbjct 543953 ATCCAGAAGGAGTCGACTCTCCATTTGGTGCTGCGTCTCCGCGGTGGTAT 543904 Score = 122 bits (134), Expect = 8e-23 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||| ||||| ||||||| || | || || || || ||||| || ||| Sbjct 542993 ATGCAAATTTTTGTGAAAACCTTGACCGGAAAAACCATCACCCTGGAGGTGGAGCCATCC 542934 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||||| || || || || || ||||| || || || || || || || Sbjct 542933 GACACCATTGAGAACGTGAAGGCCAAGATCCAGGACAAGGAGGGAATCCCCCCAGACCAG 542874 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | ||||||||| || |||| || | || |||| || |||||| Sbjct 542873 CAGCGTCTCATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGCACTCTTTCGGACTACAAC 542814 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || ||||||||||| | |||||||| | ||| | || ||||| || Sbjct 542813 ATCCAGAAGGAGTCGACTCTGCATTTGGTGCTTCGTCTCCGCGGTGGTAT 542764 Score = 122 bits (134), Expect = 8e-23 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||| ||||| ||||||| || | || || || || ||||| || ||| Sbjct 543449 ATGCAAATTTTTGTGAAAACCTTGACCGGAAAAACCATCACCCTGGAGGTGGAGCCATCC 543390 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||||| || || || || || ||||| || || || || || || || Sbjct 543389 GACACCATTGAGAACGTGAAGGCCAAGATCCAGGACAAGGAGGGAATCCCCCCTGACCAG 543330 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | ||||||||| || |||| || | || |||| || |||||| Sbjct 543329 CAGCGTCTCATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGCACTCTTTCGGACTACAAC 543270 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || ||||||||||| | |||||||| | ||| | || ||||| || Sbjct 543269 ATCCAGAAGGAGTCGACTCTGCATTTGGTGCTTCGTCTCCGCGGTGGTAT 543220 Score = 118 bits (130), Expect = 9e-22 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||| ||||| ||||||| || | || || || || ||||| || ||| Sbjct 543221 ATGCAAATCTTTGTGAAAACCTTGACCGGAAAAACCATCACCCTGGAGGTGGAGCCATCC 543162 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||||| || || || || || ||||| || || || || || || || Sbjct 543161 GACACCATTGAGAACGTGAAGGCCAAGATCCAGGACAAGGAGGGAATCCCCCCAGACCAG 543102 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | |||||| || || |||| || | || |||| || |||||| Sbjct 543101 CAGCGTCTCATCTTCGCCGGAAAGCAGCTGGAGGATGGCCGCACTCTTTCGGACTACAAC 543042 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || ||||||||||| | |||||||| | ||| | || ||||| || Sbjct 543041 ATCCAGAAGGAGTCGACTCTGCATTTGGTGCTTCGTCTCCGCGGTGGTAT 542992 >seq12 Length=1235759 Score = 122 bits (134), Expect = 8e-23 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || |||||||| || |||||| | || || | || || || || || Sbjct 219168 ATGCAAATCTTCGTGAAAACTCTCACTGGCAAGACCATCACCTTGGAGGTCGAGCCCTCT 219227 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || |||| ||||| || || || ||||| || ||||| || || ||||| Sbjct 219228 GACACCATCGAGAATGTCAAGGCTAAGATCCAGGACAAGGAGGGCATTCCCCCAGATCAG 219287 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | ||||||||| || |||| || | || | ||||| |||||| Sbjct 219288 CAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGCACTCTGTCCGACTACAAC 219347 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || |||||||||||| | || ||||| | || |||| ||||| || Sbjct 219348 ATCCAGAAGGAGTCGACCCTGCACTTGGTGCTCCGCCTGCGCGGTGGTAT 219397 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434892359260800