Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20pseudoobscura_20pseudoobscura_20[refseq_20GCF_5F0000017
65.3_202013-04-11] 4,790 sequences; 152,696,384 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq6 131 4e-25
seq3 114 3e-20
seq12 111 4e-19
>seq6
Length=9197557
Score = 131 bits (144), Expect = 4e-25
Identities = 156/212 (74%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
|| || | ||| ||||| ||||| || ||||||||||| || | | ||| | ||||||
Sbjct 542326 AGCACCAAATGGAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTGCGGCCATCT 542385
Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
|| || || || |||||||| || | ||||||||| | | |||||| ||||| ||
Sbjct 542386 TCCAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCTGGGGGGATTCCCTCCTTGTCC 542445
Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072
||||| || ||| || |||| | | |||| ||| || || || || |||||||||
Sbjct 542446 TGAATCTTGGCTTTCACGTTCTCAATGGTGTCAGAAGGTTCGACCTCCAGGGTAATAGTT 542505
Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || || |||||||||||||| | |||||
Sbjct 542506 TTTCCAGTCAGAGTCTTCACGAAAATTTGCAT 542537
Score = 122 bits (134), Expect = 2e-22
Identities = 154/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
|| || | ||| ||||| ||||| || ||||||||||| || | | ||| | |||||
Sbjct 543466 AGCACCAAATGGAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTGCGGCCATCC 543525
Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
|| || || ||||||||||| || | ||||||||| | | |||||| ||||| ||
Sbjct 543526 TCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCAGGGGGGATTCCCTCCTTGTCC 543585
Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072
|| || || || || |||| | | |||| || ||| || || || || || |||
Sbjct 543586 TGGATCTTGGCCTTCACGTTCTCAATGGTGTCGGATGGCTCCACCTCCAGGGTGATGGTT 543645
Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || || |||||||||||||||| ||||||
Sbjct 543646 TTTCCAGTCAGAGTCTTCACGAAGATCTGCAT 543677
Score = 109 bits (120), Expect = 1e-18
Identities = 153/215 (71%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
|| || | ||| ||||| ||||| || ||||||||||| || | | ||| | |||||
Sbjct 544150 AGCACCAAATGGAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTGCGGCCATCC 544209
Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
|| || || ||||||||||| || | ||||||||| | | |||||| ||||| ||
Sbjct 544210 TCCAGTTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCTGGGGGGATTCCCTCCTTGTCC 544269
Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072
|| || || || || |||| | | |||| || ||| || || || || || |||
Sbjct 544270 TGGATCTTGGCCTTCACGTTCTCAATGGTGTCGGATGGCTCCACCTCCAGGGTGATGGTT 544329
Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107
|| || || | || ||||| |||| |||||||||
Sbjct 544330 TTTCCAGTCAAGGTTTTCACAAAGATCTGCATTTT 544364
Score = 102 bits (112), Expect = 2e-16
Identities = 152/214 (71%), Gaps = 4/214 (2%)
Strand=Plus/Plus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
|| || | ||| ||||| ||||| || ||||||||||| || | | ||| | |||||
Sbjct 543010 AGCACCAAATGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTGCGGCCATCC 543069
Query 151953 TCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTT 152010
|| || ||||| ||||||||||| || | ||||||||| | | |||||| ||||| |
Sbjct 543070 TCCAGCTGCTTT--CCGGCGAAGATGAGACGCTGCTGGTCTGGGGGGATTCCCTCCTTGT 543127
Query 152011 CTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAG 152070
| || || || || || |||| | | |||| || ||| || || || || || |
Sbjct 543128 CCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGGATGGCTCCACCTCCAGGGTGATGG 543187
Query 152071 TTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|||| || || | || ||||| |||| |||||
Sbjct 543188 TTTTTCCGGTCAAGGTTTTCACAAAGATTTGCAT 543221
Score = 98.7 bits (108), Expect = 2e-15
Identities = 149/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
|| || | ||| ||||| ||||| || ||||||||||| || | | ||| | |||||
Sbjct 542554 AGCACCAAATGGAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTGCGGCCATCC 542613
Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
|| || || ||||||||||| || | ||||||||| | | |||||| ||||| ||
Sbjct 542614 TCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCAGGGGGGATTCCCTCCTTGTCC 542673
Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072
|| || || || || |||| | | |||| || ||| || || || || || |||
Sbjct 542674 TGGATCTTGGCCTTCACGTTCTCAATGGTGTCGGATGGCTCCACCTCCAGGGTGATGGTT 542733
Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || || | || ||||| |||| |||||
Sbjct 542734 TTTCCGGTCAAGGTTTTCACAAAGATTTGCAT 542765
Score = 98.7 bits (108), Expect = 2e-15
Identities = 149/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
|| || | ||| ||||| ||||| || ||||||||||| || | | ||| | |||||
Sbjct 543694 AGCACCAAATGGAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTGCGGCCATCC 543753
Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
|| || || ||||||||||| || | ||||||||| | | |||||| ||||| ||
Sbjct 543754 TCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCAGGGGGGATTCCCTCCTTGTCC 543813
Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072
|| || || || || |||| | | |||| || ||| || || || || || |||
Sbjct 543814 TGGATCTTGGCCTTCACGTTCTCAATGGTGTCGGATGGCTCCACCTCCAGGGTGATGGTT 543873
Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || || | || ||||| |||| |||||
Sbjct 543874 TTTCCGGTCAAGGTTTTCACAAAGATTTGCAT 543905
Score = 98.7 bits (108), Expect = 2e-15
Identities = 149/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
|| || | ||| ||||| ||||| || ||||||||||| || | | ||| | |||||
Sbjct 543922 AGCACCAAATGGAGAGTCGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCATCC 543981
Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
|| || || ||||||||||| || | ||||||||| | | |||||| ||||| ||
Sbjct 543982 TCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCTGGAGGGATTCCCTCCTTGTCC 544041
Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072
|| || || || || |||| | | |||| || ||| || || || || || |||
Sbjct 544042 TGGATCTTGGCCTTTACGTTCTCAATGGTGTCGGATGGCTCCACCTCCAGGGTGATGGTT 544101
Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || || | || ||||| |||| |||||
Sbjct 544102 TTTCCGGTCAAGGTTTTCACAAAGATTTGCAT 544133
Score = 95.1 bits (104), Expect = 3e-14
Identities = 148/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
|| || | ||| ||||| ||||| || ||||||||||| || | | ||| | |||||
Sbjct 542782 AGCACCAAATGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTGCGGCCATCC 542841
Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
|| || || ||||||||||| || | ||||||||| | | |||||| ||||| ||
Sbjct 542842 TCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCTGGGGGGATTCCCTCCTTGTCC 542901
Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072
|| || || || || |||| | | |||| || ||| || || || || || |||
Sbjct 542902 TGGATCTTGGCCTTCACGTTCTCAATGGTGTCGGATGGCTCCACCTCCAGGGTGATGGTT 542961
Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || || | || ||||| || | |||||
Sbjct 542962 TTTCCGGTCAAGGTTTTCACAAAAATTTGCAT 542993
Score = 95.1 bits (104), Expect = 3e-14
Identities = 148/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
|| || | ||| ||||| ||||| || ||||||||||| || | | ||| | |||||
Sbjct 543238 AGCACCAAATGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTGCGGCCATCC 543297
Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
|| || || ||||||||||| || | ||||||||| | | |||||| ||||| ||
Sbjct 543298 TCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCAGGGGGGATTCCCTCCTTGTCC 543357
Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072
|| || || || || |||| | | |||| || ||| || || || || || |||
Sbjct 543358 TGGATCTTGGCCTTCACGTTCTCAATGGTGTCGGATGGCTCCACCTCCAGGGTGATGGTT 543417
Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || || | || ||||| || | |||||
Sbjct 543418 TTTCCGGTCAAGGTTTTCACAAAAATTTGCAT 543449
>seq3
Length=12541198
Score = 114 bits (126), Expect = 3e-20
Identities = 153/213 (72%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951
||| || | ||| | || ||||| || |||||||||||||||| ||||| | || ||
Sbjct 3175465 GAGCACCAAATGCAAGGTGGACTCCTTCTGGATGTTGTAATCGGACAAAGTACGTCCGTC 3175406
Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011
|| || || ||||||||||| | | |||||| || | | || || ||||| ||
Sbjct 3175405 CTCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGGGAATGCCCTCCTTGTC 3175346
Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071
|| || || |||||| |||| | | |||| || ||| || || || || || ||
Sbjct 3175345 CTGGATCTTAGCCTTGACATTCTCGATGGTGTCCGAGGGCTCGACCTCGAGGGTGATGGT 3175286
Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
||||| || |||||||||||||||| ||||||
Sbjct 3175285 CTTGCCAGTCAGAGTCTTCACGAAGATCTGCAT 3175253
Score = 111 bits (122), Expect = 4e-19
Identities = 154/216 (71%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951
||| || | ||| | || ||||| || |||||||||||||||| || || | || ||
Sbjct 3174097 GAGCACCAAATGCAAGGTGGACTCCTTCTGGATGTTGTAATCGGACAAGGTACGTCCGTC 3174038
Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011
|| || || ||||||||||| | | |||||| || | | || || ||||| ||
Sbjct 3174037 CTCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGGGAATGCCCTCCTTGTC 3173978
Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071
|| || || |||||| |||| | | |||| || ||| || || || || || ||
Sbjct 3173977 CTGGATCTTGGCCTTGACATTCTCGATGGTGTCCGAGGGCTCAACCTCGAGGGTGATGGT 3173918
Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107
||||| || || ||||||||||||| |||||||||
Sbjct 3173917 CTTGCCAGTCAGGGTCTTCACGAAGATCTGCATTTT 3173882
Score = 105 bits (116), Expect = 2e-17
Identities = 151/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951
||| || | ||| | || ||||| || ||||||||||| |||| ||||| | || ||
Sbjct 3174325 GAGCACCAAATGCAAGGTGGACTCCTTCTGGATGTTGTAGTCGGACAAAGTACGTCCGTC 3174266
Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011
|| || || ||||||||||| | | |||||| || | | || || ||||| ||
Sbjct 3174265 CTCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGGGAATGCCCTCCTTGTC 3174206
Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071
|| || || |||||| |||| | | |||| || ||| || || || || |||||
Sbjct 3174205 CTGGATCTTAGCCTTGACATTCTCGATGGTGTCCGAGGGCTCGACCTCGAGGGTGATAGT 3174146
Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
||||| || |||||||| || |||| ||||||
Sbjct 3174145 CTTGCCAGTCAGAGTCTTGACAAAGATCTGCAT 3174113
Score = 105 bits (116), Expect = 2e-17
Identities = 151/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951
||| || | ||| | || ||||| || |||||||||||||||| ||||| | || ||
Sbjct 3174553 GAGCACCAAATGCAAGGTGGACTCCTTCTGGATGTTGTAATCGGACAAAGTACGTCCGTC 3174494
Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011
|| || || ||||||||||| | | |||||| || | | || || ||||| ||
Sbjct 3174493 CTCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGGGAATGCCCTCCTTGTC 3174434
Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071
|| || || |||||| |||| | | |||| || ||| || || || || || ||
Sbjct 3174433 CTGGATCTTAGCCTTGACATTCTCGATGGTGTCCGAGGGCTCGACCTCGAGGGTGATGGT 3174374
Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
||||| || |||||||| || |||| ||||||
Sbjct 3174373 CTTGCCAGTCAGAGTCTTGACAAAGATCTGCAT 3174341
Score = 105 bits (116), Expect = 2e-17
Identities = 151/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951
||| || | ||| | || ||||| || |||||||||||||||| ||||| | || ||
Sbjct 3174781 GAGCACCAAATGCAAGGTGGACTCCTTCTGGATGTTGTAATCGGACAAAGTACGTCCGTC 3174722
Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011
|| || || ||||||||||| | | |||||| || | | || || ||||| ||
Sbjct 3174721 CTCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGGGAATGCCCTCCTTGTC 3174662
Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071
|| || || |||||| |||| | | |||| || ||| || || || || || ||
Sbjct 3174661 CTGGATCTTAGCCTTGACATTCTCGATGGTGTCCGAGGGCTCGACCTCGAGGGTGATGGT 3174602
Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
||||| || |||||||| || |||| ||||||
Sbjct 3174601 CTTGCCAGTCAGAGTCTTGACAAAGATCTGCAT 3174569
Score = 105 bits (116), Expect = 2e-17
Identities = 149/208 (72%), Gaps = 1/208 (0%)
Strand=Plus/Minus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| || | ||| ||||| || |||||||||||||||| ||||| | || || || |
Sbjct 3175915 CAAG-TGCAAAGTGGACTCCTTCTGGATGTTGTAATCGGACAAAGTACGTCCGTCCTCCA 3175857
Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016
| || ||||||||||| | | |||||| || | | || || ||||| || || |
Sbjct 3175856 GCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGGGAATGCCCTCCTTGTCCTGGA 3175797
Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076
| || |||||| |||| | | |||| || ||| || || || || || || ||||
Sbjct 3175796 TCTTAGCCTTGACATTCTCGATGGTGTCCGAGGGCTCGACCTCGAGGGTGATGGTCTTGC 3175737
Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104
| || |||||||| || |||| ||||||
Sbjct 3175736 CAGTCAGAGTCTTGACAAAGATCTGCAT 3175709
Score = 102 bits (112), Expect = 2e-16
Identities = 148/208 (71%), Gaps = 1/208 (0%)
Strand=Plus/Minus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| || || || ||||| || ||||||||||| |||| ||||| | || || || |
Sbjct 3175231 CAAG-TGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAAAGTACGTCCGTCCTCCA 3175173
Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016
| || ||||||||||| | | |||||| || | | || || ||||| || || |
Sbjct 3175172 GCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGGGAATGCCCTCCTTGTCCTGGA 3175113
Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076
| || |||||| |||| | | |||| || ||| || || || || || || ||||
Sbjct 3175112 TCTTAGCCTTGACATTCTCGATGGTGTCCGAGGGCTCGACCTCGAGGGTGATGGTCTTGC 3175053
Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104
| || |||||||| || |||| ||||||
Sbjct 3175052 CAGTCAGAGTCTTGACAAAGATCTGCAT 3175025
Score = 100 bits (110), Expect = 7e-16
Identities = 150/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951
||| || | ||| | || ||||| || ||||||||||| |||| ||||| | || ||
Sbjct 3175009 GAGCACCAAATGCAAGGTGGACTCCTTCTGGATGTTGTAGTCGGACAAAGTACGTCCGTC 3174950
Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011
|| || || ||||||||||| | | |||||| || | | || || ||||| ||
Sbjct 3174949 CTCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGGGAATGCCCTCCTTGTC 3174890
Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071
|| || || |||||| |||| | | |||| || ||| || || || || || ||
Sbjct 3174889 CTGGATCTTAGCCTTGACATTCTCGATGGTGTCCGAGGGCTCGACCTCGAGGGTGATGGT 3174830
Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
||||| || |||||||| || |||| ||||||
Sbjct 3174829 CTTGCCAGTCAGAGTCTTGACAAAGATCTGCAT 3174797
Score = 100 bits (110), Expect = 7e-16
Identities = 150/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951
||| || | ||| | || ||||| || ||||||||||| |||| ||||| | || ||
Sbjct 3175693 GAGCACCAAATGCAAGGTGGACTCCTTCTGGATGTTGTAGTCGGACAAAGTACGTCCGTC 3175634
Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011
|| || || ||||||||||| | | |||||| || | | || || ||||| ||
Sbjct 3175633 CTCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGGGAATGCCCTCCTTGTC 3175574
Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071
|| || || |||||| |||| | | |||| || ||| || || || || || ||
Sbjct 3175573 CTGGATCTTAGCCTTGACATTCTCGATGGTGTCCGAGGGCTCGACCTCGAGGGTGATGGT 3175514
Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
||||| || |||||||| || |||| ||||||
Sbjct 3175513 CTTGCCAGTCAGAGTCTTGACAAAGATCTGCAT 3175481
>seq12
Length=1235759
Score = 111 bits (122), Expect = 4e-19
Identities = 152/211 (72%), Gaps = 1/211 (0%)
Strand=Plus/Minus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| || || || ||||| || ||||||||||| |||| | ||| | ||||| || |
Sbjct 219374 CAAG-TGCAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGGCCATCCTCCA 219316
Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016
| || ||||||||||| || | |||||| || | | || || ||||| || || |
Sbjct 219315 GCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGGGGAATGCCCTCCTTGTCCTGGA 219256
Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076
| || |||||| |||| | | |||| || ||| || || | || || || ||||
Sbjct 219255 TCTTAGCCTTGACATTCTCGATGGTGTCAGAGGGCTCGACCTCCAAGGTGATGGTCTTGC 219196
Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107
| |||||||| |||||||||| ||||||||
Sbjct 219195 CAGTGAGAGTTTTCACGAAGATTTGCATTTT 219165
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153749987854090
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