Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20pseudoobscura_20pseudoobscura_20[refseq_20GCF_5F0000017
65.3_202013-04-11] 4,790 sequences; 152,696,384 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq3 176 9e-39
seq6 163 6e-35
seq12 161 2e-34
seq4631 158 3e-33
seq15 123 5e-23
seq1016 95.1 3e-14
seq13 95.1 3e-14
seq14 89.7 1e-12
seq1 89.7 1e-12
>seq3
Length=12541198
Score = 176 bits (194), Expect = 9e-39
Identities = 179/231 (77%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG-C 282931
||||| |||||||| || |||| ||| || ||| || || ||||||||||| || | |
Sbjct 3174111 CCACCGCGCAGGCGGAGCACCAAATGCAAGGTGGACTCCTTCTGGATGTTGTAATCGGAC 3174052
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
||| || || || ||||| || || || ||||| ||||||||||| || || || ||
Sbjct 3174051 AAG-GTACGTCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGGG 3173993
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
||| ||||||||||| |||||||| || || || | ||||| |||||||| | || ||
Sbjct 3173992 AATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTCTCGATGGTGTCCGAGGGCTCAAC 3173933
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102
||||| ||||| ||||| || |||| ||||| ||||| |||||||||||
Sbjct 3173932 CTCGAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCATTTT 3173882
Score = 176 bits (194), Expect = 9e-39
Identities = 175/227 (77%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
||||| |||||||| || |||| ||| || ||| || || |||||||||||||| |
Sbjct 3174339 CCACCGCGCAGGCGGAGCACCAAATGCAAGGTGGACTCCTTCTGGATGTTGTAGTCGGAC 3174280
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
| || || || ||||| || || || ||||| ||||||||||| || || || |||
Sbjct 3174279 AAAGTACGTCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGGGA 3174220
Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052
|| ||||||||||| |||||||| || || || | ||||| |||||||| | |||||
Sbjct 3174219 ATGCCCTCCTTGTCCTGGATCTTAGCCTTGACATTCTCGATGGTGTCCGAGGGCTCGACC 3174160
Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
||||| ||||| ||||| || |||| |||||| || || ||||||||
Sbjct 3174159 TCGAGGGTGATAGTCTTGCCAGTCAGAGTCTTGACAAAGATCTGCAT 3174113
Score = 176 bits (194), Expect = 9e-39
Identities = 175/227 (77%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
||||| |||||||| || |||| ||| || ||| || || |||||||||||||| |
Sbjct 3175023 CCACCGCGCAGGCGGAGCACCAAATGCAAGGTGGACTCCTTCTGGATGTTGTAGTCGGAC 3174964
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
| || || || ||||| || || || ||||| ||||||||||| || || || |||
Sbjct 3174963 AAAGTACGTCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGGGA 3174904
Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052
|| ||||||||||| |||||||| || || || | ||||| |||||||| | |||||
Sbjct 3174903 ATGCCCTCCTTGTCCTGGATCTTAGCCTTGACATTCTCGATGGTGTCCGAGGGCTCGACC 3174844
Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
||||| ||||| ||||| || |||| |||||| || || ||||||||
Sbjct 3174843 TCGAGGGTGATGGTCTTGCCAGTCAGAGTCTTGACAAAGATCTGCAT 3174797
Score = 176 bits (194), Expect = 9e-39
Identities = 175/227 (77%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
||||| |||||||| || |||| ||| || ||| || || ||||||||||| || |
Sbjct 3175479 CCACCGCGCAGGCGGAGCACCAAATGCAAGGTGGACTCCTTCTGGATGTTGTAATCGGAC 3175420
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
| || || || ||||| || || || ||||| ||||||||||| || || || |||
Sbjct 3175419 AAAGTACGTCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGGGA 3175360
Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052
|| ||||||||||| |||||||| || || || | ||||| |||||||| | |||||
Sbjct 3175359 ATGCCCTCCTTGTCCTGGATCTTAGCCTTGACATTCTCGATGGTGTCCGAGGGCTCGACC 3175300
Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
||||| ||||| ||||| || |||| |||||| ||||| ||||||||
Sbjct 3175299 TCGAGGGTGATGGTCTTGCCAGTCAGAGTCTTCACGAAGATCTGCAT 3175253
Score = 176 bits (194), Expect = 9e-39
Identities = 175/227 (77%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
||||| |||||||| || |||| ||| || ||| || || |||||||||||||| |
Sbjct 3175707 CCACCGCGCAGGCGGAGCACCAAATGCAAGGTGGACTCCTTCTGGATGTTGTAGTCGGAC 3175648
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
| || || || ||||| || || || ||||| ||||||||||| || || || |||
Sbjct 3175647 AAAGTACGTCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGGGA 3175588
Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052
|| ||||||||||| |||||||| || || || | ||||| |||||||| | |||||
Sbjct 3175587 ATGCCCTCCTTGTCCTGGATCTTAGCCTTGACATTCTCGATGGTGTCCGAGGGCTCGACC 3175528
Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
||||| ||||| ||||| || |||| |||||| || || ||||||||
Sbjct 3175527 TCGAGGGTGATGGTCTTGCCAGTCAGAGTCTTGACAAAGATCTGCAT 3175481
Score = 170 bits (188), Expect = 4e-37
Identities = 174/227 (77%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
||||| |||||||| || |||| ||| || ||| || || ||||||||||| || |
Sbjct 3174567 CCACCGCGCAGGCGGAGCACCAAATGCAAGGTGGACTCCTTCTGGATGTTGTAATCGGAC 3174508
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
| || || || ||||| || || || ||||| ||||||||||| || || || |||
Sbjct 3174507 AAAGTACGTCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGGGA 3174448
Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052
|| ||||||||||| |||||||| || || || | ||||| |||||||| | |||||
Sbjct 3174447 ATGCCCTCCTTGTCCTGGATCTTAGCCTTGACATTCTCGATGGTGTCCGAGGGCTCGACC 3174388
Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
||||| ||||| ||||| || |||| |||||| || || ||||||||
Sbjct 3174387 TCGAGGGTGATGGTCTTGCCAGTCAGAGTCTTGACAAAGATCTGCAT 3174341
Score = 170 bits (188), Expect = 4e-37
Identities = 174/227 (77%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
||||| |||||||| || |||| ||| || ||| || || ||||||||||| || |
Sbjct 3174795 CCACCGCGCAGGCGGAGCACCAAATGCAAGGTGGACTCCTTCTGGATGTTGTAATCGGAC 3174736
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
| || || || ||||| || || || ||||| ||||||||||| || || || |||
Sbjct 3174735 AAAGTACGTCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGGGA 3174676
Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052
|| ||||||||||| |||||||| || || || | ||||| |||||||| | |||||
Sbjct 3174675 ATGCCCTCCTTGTCCTGGATCTTAGCCTTGACATTCTCGATGGTGTCCGAGGGCTCGACC 3174616
Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
||||| ||||| ||||| || |||| |||||| || || ||||||||
Sbjct 3174615 TCGAGGGTGATGGTCTTGCCAGTCAGAGTCTTGACAAAGATCTGCAT 3174569
Score = 158 bits (174), Expect = 3e-33
Identities = 171/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
|| || |||||||| || |||| || | || || || |||||||||||||| |
Sbjct 3175251 CCTCCGCGCAGGCGGAGCACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAC 3175192
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
| || || || ||||| || || || ||||| ||||||||||| || || || |||
Sbjct 3175191 AAAGTACGTCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGGGA 3175132
Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052
|| ||||||||||| |||||||| || || || | ||||| |||||||| | |||||
Sbjct 3175131 ATGCCCTCCTTGTCCTGGATCTTAGCCTTGACATTCTCGATGGTGTCCGAGGGCTCGACC 3175072
Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
||||| ||||| ||||| || |||| |||||| || || ||||||||
Sbjct 3175071 TCGAGGGTGATGGTCTTGCCAGTCAGAGTCTTGACAAAGATCTGCAT 3175025
Score = 158 bits (174), Expect = 3e-33
Identities = 171/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
|| ||||| || || | ||||| || || ||| || || ||||||||||| || |
Sbjct 3175935 CCGCCACGAAGACGCAATACCAAGTGCAAAGTGGACTCCTTCTGGATGTTGTAATCGGAC 3175876
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
| || || || ||||| || || || ||||| ||||||||||| || || || |||
Sbjct 3175875 AAAGTACGTCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGGGA 3175816
Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052
|| ||||||||||| |||||||| || || || | ||||| |||||||| | |||||
Sbjct 3175815 ATGCCCTCCTTGTCCTGGATCTTAGCCTTGACATTCTCGATGGTGTCCGAGGGCTCGACC 3175756
Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
||||| ||||| ||||| || |||| |||||| || || ||||||||
Sbjct 3175755 TCGAGGGTGATGGTCTTGCCAGTCAGAGTCTTGACAAAGATCTGCAT 3175709
>seq6
Length=9197557
Score = 163 bits (180), Expect = 6e-35
Identities = 173/228 (76%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
|||||| || || || || |||| ||| | || || || |||||||||||||| |
Sbjct 543450 ACCACCGCGGAGACGCAGCACCAAATGGAGAGTCGACTCCTTCTGGATGTTGTAGTCCGA 543509
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
||| |||||||||||||| || || || ||||| ||||| | ||| || |||||| ||
Sbjct 543510 AAGAGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCAGGGGG 543569
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|| ||||||||||| |||||||| || || ||| | || || ||||| || | || ||
Sbjct 543570 GATTCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGGATGGCTCCAC 543629
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| || ||||| || || || |||| |||||| ||||| ||||||||
Sbjct 543630 CTCCAGGGTGATGGTTTTTCCAGTCAGAGTCTTCACGAAGATCTGCAT 543677
Score = 159 bits (176), Expect = 7e-34
Identities = 174/231 (75%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
|||||| || || || || |||| ||| | || || || |||||||||||||| |
Sbjct 544134 ACCACCGCGGAGACGCAGCACCAAATGGAGAGTCGACTCCTTCTGGATGTTGTAGTCCGA 544193
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
||| |||||||||||||| ||||| || ||||| ||||| | ||| || ||||| ||
Sbjct 544194 AAGAGTGCGGCCATCCTCCAGTTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCTGGGGG 544253
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|| ||||||||||| |||||||| || || ||| | || || ||||| || | || ||
Sbjct 544254 GATTCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGGATGGCTCCAC 544313
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102
|| || ||||| || || || ||||| || || || || |||||||||||
Sbjct 544314 CTCCAGGGTGATGGTTTTTCCAGTCAAGGTTTTCACAAAGATCTGCATTTT 544364
Score = 154 bits (170), Expect = 3e-32
Identities = 171/228 (75%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
|||||| || || ||||| |||| ||| | || || || |||||||||||||| |
Sbjct 543222 ACCACCGCGGAGACGAAGCACCAAATGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCGA 543281
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
||| |||||||||||||| || || || ||||| ||||| | ||| || |||||| ||
Sbjct 543282 AAGAGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCAGGGGG 543341
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|| ||||||||||| |||||||| || || ||| | || || ||||| || | || ||
Sbjct 543342 GATTCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGGATGGCTCCAC 543401
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| || ||||| || || || ||||| || || || || || |||||
Sbjct 543402 CTCCAGGGTGATGGTTTTTCCGGTCAAGGTTTTCACAAAAATTTGCAT 543449
Score = 154 bits (170), Expect = 3e-32
Identities = 171/228 (75%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
|||||| || || || || |||| ||| | || || || ||||||||||||||||
Sbjct 543906 ACCACCGCGGAGACGCAGCACCAAATGGAGAGTCGACTCCTTCTGGATGTTGTAGTCAGA 543965
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
||| |||||||||||||| || || || ||||| ||||| | ||| || ||||| ||
Sbjct 543966 AAGAGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCTGGAGG 544025
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|| ||||||||||| |||||||| || |||||| | || || ||||| || | || ||
Sbjct 544026 GATTCCCTCCTTGTCCTGGATCTTGGCCTTTACGTTCTCAATGGTGTCGGATGGCTCCAC 544085
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| || ||||| || || || ||||| || || || || || |||||
Sbjct 544086 CTCCAGGGTGATGGTTTTTCCGGTCAAGGTTTTCACAAAGATTTGCAT 544133
Score = 152 bits (168), Expect = 1e-31
Identities = 170/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
|| ||||| || || || |||| ||| | || || || |||||||||||||| | |
Sbjct 542311 CCGCCACGGAGACGCAGCACCAAATGGAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAA 542370
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
|| ||||||||||| || || || || || || ||||| | ||| || ||||| ||
Sbjct 542371 AGAGTGCGGCCATCTTCCAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCTGGGGGG 542430
Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052
|| ||||||||||| || ||||| ||||| ||| | || || ||||| |||| ||||||
Sbjct 542431 ATTCCCTCCTTGTCCTGAATCTTGGCTTTCACGTTCTCAATGGTGTCAGAAGGTTCGACC 542490
Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| || || || || || || |||| |||||| ||||| || |||||
Sbjct 542491 TCCAGGGTAATAGTTTTTCCAGTCAGAGTCTTCACGAAAATTTGCAT 542537
Score = 150 bits (166), Expect = 4e-31
Identities = 170/228 (75%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
|||||| || || || || |||| ||| | || || || |||||||||||||| |
Sbjct 542538 ACCACCGCGGAGACGCAGCACCAAATGGAGAGTCGACTCCTTCTGGATGTTGTAGTCCGA 542597
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
||| |||||||||||||| || || || ||||| ||||| | ||| || |||||| ||
Sbjct 542598 AAGAGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCAGGGGG 542657
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|| ||||||||||| |||||||| || || ||| | || || ||||| || | || ||
Sbjct 542658 GATTCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGGATGGCTCCAC 542717
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| || ||||| || || || ||||| || || || || || |||||
Sbjct 542718 CTCCAGGGTGATGGTTTTTCCGGTCAAGGTTTTCACAAAGATTTGCAT 542765
Score = 150 bits (166), Expect = 4e-31
Identities = 170/228 (75%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
|||||| || || ||||| |||| ||| | || || || |||||||||||||| |
Sbjct 542766 ACCACCGCGGAGACGAAGCACCAAATGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCGA 542825
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
||| |||||||||||||| || || || ||||| ||||| | ||| || ||||| ||
Sbjct 542826 AAGAGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCTGGGGG 542885
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|| ||||||||||| |||||||| || || ||| | || || ||||| || | || ||
Sbjct 542886 GATTCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGGATGGCTCCAC 542945
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| || ||||| || || || ||||| || || || || || |||||
Sbjct 542946 CTCCAGGGTGATGGTTTTTCCGGTCAAGGTTTTCACAAAAATTTGCAT 542993
Score = 150 bits (166), Expect = 4e-31
Identities = 170/228 (75%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
|||||| || || ||||| |||| ||| | || || || |||||||||||||| |
Sbjct 542994 ACCACCGCGGAGACGAAGCACCAAATGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCGA 543053
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
||| |||||||||||||| || || || ||||| ||||| | ||| || ||||| ||
Sbjct 543054 AAGAGTGCGGCCATCCTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCTGGGGG 543113
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|| ||||||||||| |||||||| || || ||| | || || ||||| || | || ||
Sbjct 543114 GATTCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGGATGGCTCCAC 543173
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| || ||||| || || || ||||| || || || || || |||||
Sbjct 543174 CTCCAGGGTGATGGTTTTTCCGGTCAAGGTTTTCACAAAGATTTGCAT 543221
Score = 150 bits (166), Expect = 4e-31
Identities = 170/228 (75%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
|||||| || || || || |||| ||| | || || || |||||||||||||| |
Sbjct 543678 ACCACCGCGGAGACGCAGCACCAAATGGAGAGTCGACTCCTTCTGGATGTTGTAGTCCGA 543737
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
||| |||||||||||||| || || || ||||| ||||| | ||| || |||||| ||
Sbjct 543738 AAGAGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCAGGGGG 543797
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|| ||||||||||| |||||||| || || ||| | || || ||||| || | || ||
Sbjct 543798 GATTCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGGATGGCTCCAC 543857
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| || ||||| || || || ||||| || || || || || |||||
Sbjct 543858 CTCCAGGGTGATGGTTTTTCCGGTCAAGGTTTTCACAAAGATTTGCAT 543905
>seq12
Length=1235759
Score = 161 bits (178), Expect = 2e-34
Identities = 175/232 (75%), Gaps = 0/232 (0%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
|||||| |||||||| || |||| || | || || || |||||||||||||| |
Sbjct 219395 ACCACCGCGCAGGCGGAGCACCAAGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCGGA 219336
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| |||||||||||||| || || || ||||| ||||||| ||| || || || ||
Sbjct 219335 CAGAGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGGGG 219276
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
||| ||||||||||| |||||||| || || || | ||||| ||||| || | |||||
Sbjct 219275 AATGCCCTCCTTGTCCTGGATCTTAGCCTTGACATTCTCGATGGTGTCAGAGGGCTCGAC 219216
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTTC 283103
|| | ||||| ||||| || || | ||| || ||||| || |||||||||
Sbjct 219215 CTCCAAGGTGATGGTCTTGCCAGTGAGAGTTTTCACGAAGATTTGCATTTTC 219164
>seq4631
Length=7852
Score = 158 bits (174), Expect = 3e-33
Identities = 171/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
|||||||| || |||||||| | ||| || || || || || ||||| || ||||
Sbjct 715 CCACCACGAAGCCGAAGTACTAAATGCAAGGTAGACTCCTTCTGAATGTTATAATCAGAC 656
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
|| || |||||||| || | ||| || || || ||||||||||| ||||| || |||
Sbjct 655 AGTGTTCGGCCATCTTCCAATTGCTTGCCAGCGAAGATCAAACGCTGTTGATCTGGAGGA 596
Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052
|| || || ||||| |||||||| ||||| || | ||||| || ||||| | ||||||
Sbjct 595 ATTCCTTCTTTGTCCTGGATCTTGGCTTTGACATTTTCGATGGTATCCGACGGTTCGACC 536
Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| ||||| || ||||| ||||| | ||||| || || ||||||||
Sbjct 535 TCAAGAGTTATGGTCTTGCCCGTTAGGGTCTTTACAAAGATCTGCAT 489
>seq15
Length=6594820
Score = 123 bits (136), Expect = 5e-23
Identities = 122/158 (77%), Gaps = 0/158 (0%)
Strand=Plus/Minus
Query 273780 GTGAAAATGTACCTGGCACTCGCATGGTCCTTGCCACCTTGCAGCCTCGAACCAAACTGA 273839
||||||||||| | || || ||| ||||||||| || ||||| | ||| ||||||
Sbjct 6045862 GTGAAAATGTAACGAGCGCTGGCACAGTCCTTGCCGCCCGTCAGCCGAGTACCGAACTGA 6045803
Query 273840 CCCTCGGGCAGTAGCCAGTTTATGTTGTTGCTACCGACGTAATCCTGAGCCATATTCACG 273899
|| ||| ||| ||||||||||||| ||| ||||| | ||| |||| |||||||
Sbjct 6045802 CCGCGCGGCTCCAGCAAGTTTATGTTGTTCGAACCAACGTAGTTCTGGGCCAGATTCACG 6045743
Query 273900 ATAGTCCCCTGAAGGGATACCTCGCCGTGGTGATAGGC 273937
|||||| ||| ||||| |||||||||||||| |||||
Sbjct 6045742 ATAGTCATCTGGAGGGAGACCTCGCCGTGGTGGTAGGC 6045705
>seq1016
Length=2573
Score = 95.1 bits (104), Expect = 3e-14
Identities = 55/57 (96%), Gaps = 0/57 (0%)
Strand=Plus/Plus
Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810
||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct 1679 TAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTCCCCG 1735
>seq13
Length=2439919
Score = 95.1 bits (104), Expect = 3e-14
Identities = 55/57 (96%), Gaps = 0/57 (0%)
Strand=Plus/Plus
Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810
||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct 979511 TAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTCCCCG 979567
Score = 95.1 bits (104), Expect = 3e-14
Identities = 55/57 (96%), Gaps = 0/57 (0%)
Strand=Plus/Minus
Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810
||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct 984237 TAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTCCCCG 984181
Score = 89.7 bits (98), Expect = 1e-12
Identities = 54/57 (95%), Gaps = 0/57 (0%)
Strand=Plus/Minus
Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810
|||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||
Sbjct 1011890 TAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTCCCCG 1011834
Score = 89.7 bits (98), Expect = 1e-12
Identities = 54/57 (95%), Gaps = 0/57 (0%)
Strand=Plus/Plus
Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810
|||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||
Sbjct 1019423 TAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTCCCCG 1019479
Score = 89.7 bits (98), Expect = 1e-12
Identities = 54/57 (95%), Gaps = 0/57 (0%)
Strand=Plus/Minus
Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810
|||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||
Sbjct 1020278 TAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTCCCCG 1020222
Score = 89.7 bits (98), Expect = 1e-12
Identities = 54/57 (95%), Gaps = 0/57 (0%)
Strand=Plus/Minus
Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810
|||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||
Sbjct 1054423 TAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTCCCCG 1054367
Score = 89.7 bits (98), Expect = 1e-12
Identities = 54/57 (95%), Gaps = 0/57 (0%)
Strand=Plus/Plus
Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810
|||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||
Sbjct 1143617 TAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTCCCCG 1143673
>seq14
Length=11685562
Score = 89.7 bits (98), Expect = 1e-12
Identities = 54/57 (95%), Gaps = 0/57 (0%)
Strand=Plus/Plus
Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810
|||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||
Sbjct 7024158 TAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTCCCCG 7024214
Score = 89.7 bits (98), Expect = 1e-12
Identities = 54/57 (95%), Gaps = 0/57 (0%)
Strand=Plus/Plus
Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810
|||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||
Sbjct 7024490 TAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTCCCCG 7024546
Score = 89.7 bits (98), Expect = 1e-12
Identities = 54/57 (95%), Gaps = 0/57 (0%)
Strand=Plus/Minus
Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810
|||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||
Sbjct 7026651 TAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTCCCCG 7026595
Score = 89.7 bits (98), Expect = 1e-12
Identities = 54/57 (95%), Gaps = 0/57 (0%)
Strand=Plus/Minus
Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810
|||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||
Sbjct 7027100 TAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTCCCCG 7027044
Score = 89.7 bits (98), Expect = 1e-12
Identities = 54/57 (95%), Gaps = 0/57 (0%)
Strand=Plus/Minus
Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810
|||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||
Sbjct 7027563 TAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTCCCCG 7027507
>seq1
Length=2692213
Score = 89.7 bits (98), Expect = 1e-12
Identities = 54/57 (95%), Gaps = 0/57 (0%)
Strand=Plus/Minus
Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810
|||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||
Sbjct 481313 TAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTCCCCG 481257
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046674959652660
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |