Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20pseudoobscura_20pseudoobscura_20[refseq_20GCF_5F0000017
65.3_202013-04-11] 4,790 sequences; 152,696,384 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq3 141 7e-29
seq12 140 2e-28
seq6 129 4e-25
seq4631 105 5e-18
>seq3
Length=12541198
Score = 141 bits (156), Expect = 7e-29
Identities = 172/232 (74%), Gaps = 2/232 (1%)
Strand=Plus/Minus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || | ||| | | ||||| || | ||| |||||| ||||||||||||||
Sbjct 3174115 CATGCCACCGCGCAGGCGGAGCACCAAATGCAAGGTGGACTCCTTCTGGATGTTGTAATC 3174056
Query 44167 GG-CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTG 44225
|| | || | || |||| ||||||||||| ||||| ||||||||||||||||||||||
Sbjct 3174055 GGACAAGGTA-CGTCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTG 3173997
Query 44226 AAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATT 44285
|| | || ||||| ||| ||||| ||| | | | |||||||| | || |
Sbjct 3173996 GGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTCTCGATGGTGTCCGAGGGCT 3173937
Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
| ||||| | || || ||||| || || ||||||||||||||||| |||||
Sbjct 3173936 CAACCTCGAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 3173885
Score = 134 bits (148), Expect = 1e-26
Identities = 169/232 (73%), Gaps = 0/232 (0%)
Strand=Plus/Minus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || | ||| | | ||||| || | ||| |||||| ||||||||||||||
Sbjct 3175483 CATGCCACCGCGCAGGCGGAGCACCAAATGCAAGGTGGACTCCTTCTGGATGTTGTAATC 3175424
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
|| | || |||| ||||||||||| ||||| ||||||||||||||||||||||
Sbjct 3175423 GGACAAAGTACGTCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGG 3175364
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286
|| | || ||||| ||| ||||| ||| | | | |||||||| | || ||
Sbjct 3175363 GGGAATGCCCTCCTTGTCCTGGATCTTAGCCTTGACATTCTCGATGGTGTCCGAGGGCTC 3175304
Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
||||| | || || ||||| || || || |||||||||||||| ||||||
Sbjct 3175303 GACCTCGAGGGTGATGGTCTTGCCAGTCAGAGTCTTCACGAAGATCTGCATG 3175252
Score = 129 bits (142), Expect = 4e-25
Identities = 157/214 (73%), Gaps = 0/214 (0%)
Strand=Plus/Minus
Query 44125 CAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTC 44184
||| |||| ||| | ||| |||||| |||||||||||||||| | || ||||
Sbjct 3175921 CAATACCAAGTGCAAAGTGGACTCCTTCTGGATGTTGTAATCGGACAAAGTACGTCCGTC 3175862
Query 44185 GTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTC 44244
||||||||||| ||||| |||||||||||||||||||||| || | || ||||| ||
Sbjct 3175861 CTCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGGGAATGCCCTCCTTGTC 3175802
Query 44245 CGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGT 44304
| ||||| ||| | | | |||||||| | || || ||||| | || || ||
Sbjct 3175801 CTGGATCTTAGCCTTGACATTCTCGATGGTGTCCGAGGGCTCGACCTCGAGGGTGATGGT 3175742
Query 44305 CTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
||| || || || ||||| || ||||| ||||||
Sbjct 3175741 CTTGCCAGTCAGAGTCTTGACAAAGATCTGCATG 3175708
Score = 125 bits (138), Expect = 5e-24
Identities = 167/232 (72%), Gaps = 0/232 (0%)
Strand=Plus/Minus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || | ||| | | ||||| || | ||| |||||| ||||||||||||||
Sbjct 3174571 CATGCCACCGCGCAGGCGGAGCACCAAATGCAAGGTGGACTCCTTCTGGATGTTGTAATC 3174512
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
|| | || |||| ||||||||||| ||||| ||||||||||||||||||||||
Sbjct 3174511 GGACAAAGTACGTCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGG 3174452
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286
|| | || ||||| ||| ||||| ||| | | | |||||||| | || ||
Sbjct 3174451 GGGAATGCCCTCCTTGTCCTGGATCTTAGCCTTGACATTCTCGATGGTGTCCGAGGGCTC 3174392
Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
||||| | || || ||||| || || || ||||| || ||||| ||||||
Sbjct 3174391 GACCTCGAGGGTGATGGTCTTGCCAGTCAGAGTCTTGACAAAGATCTGCATG 3174340
Score = 125 bits (138), Expect = 5e-24
Identities = 167/232 (72%), Gaps = 0/232 (0%)
Strand=Plus/Minus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || | ||| | | ||||| || | ||| |||||| ||||||||||||||
Sbjct 3174799 CATGCCACCGCGCAGGCGGAGCACCAAATGCAAGGTGGACTCCTTCTGGATGTTGTAATC 3174740
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
|| | || |||| ||||||||||| ||||| ||||||||||||||||||||||
Sbjct 3174739 GGACAAAGTACGTCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGG 3174680
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286
|| | || ||||| ||| ||||| ||| | | | |||||||| | || ||
Sbjct 3174679 GGGAATGCCCTCCTTGTCCTGGATCTTAGCCTTGACATTCTCGATGGTGTCCGAGGGCTC 3174620
Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
||||| | || || ||||| || || || ||||| || ||||| ||||||
Sbjct 3174619 GACCTCGAGGGTGATGGTCTTGCCAGTCAGAGTCTTGACAAAGATCTGCATG 3174568
Score = 125 bits (138), Expect = 5e-24
Identities = 167/232 (72%), Gaps = 0/232 (0%)
Strand=Plus/Minus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || | ||| | | ||||| ||| || || |||||| ||||||||||| ||
Sbjct 3175255 CATGCCTCCGCGCAGGCGGAGCACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTC 3175196
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
|| | || |||| ||||||||||| ||||| ||||||||||||||||||||||
Sbjct 3175195 GGACAAAGTACGTCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGG 3175136
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286
|| | || ||||| ||| ||||| ||| | | | |||||||| | || ||
Sbjct 3175135 GGGAATGCCCTCCTTGTCCTGGATCTTAGCCTTGACATTCTCGATGGTGTCCGAGGGCTC 3175076
Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
||||| | || || ||||| || || || ||||| || ||||| ||||||
Sbjct 3175075 GACCTCGAGGGTGATGGTCTTGCCAGTCAGAGTCTTGACAAAGATCTGCATG 3175024
Score = 122 bits (134), Expect = 6e-23
Identities = 166/232 (72%), Gaps = 0/232 (0%)
Strand=Plus/Minus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || | ||| | | ||||| || | ||| |||||| ||||||||||| ||
Sbjct 3174343 CATGCCACCGCGCAGGCGGAGCACCAAATGCAAGGTGGACTCCTTCTGGATGTTGTAGTC 3174284
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
|| | || |||| ||||||||||| ||||| ||||||||||||||||||||||
Sbjct 3174283 GGACAAAGTACGTCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGG 3174224
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286
|| | || ||||| ||| ||||| ||| | | | |||||||| | || ||
Sbjct 3174223 GGGAATGCCCTCCTTGTCCTGGATCTTAGCCTTGACATTCTCGATGGTGTCCGAGGGCTC 3174164
Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
||||| | || || ||||| || || || ||||| || ||||| ||||||
Sbjct 3174163 GACCTCGAGGGTGATAGTCTTGCCAGTCAGAGTCTTGACAAAGATCTGCATG 3174112
Score = 122 bits (134), Expect = 6e-23
Identities = 166/232 (72%), Gaps = 0/232 (0%)
Strand=Plus/Minus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || | ||| | | ||||| || | ||| |||||| ||||||||||| ||
Sbjct 3175027 CATGCCACCGCGCAGGCGGAGCACCAAATGCAAGGTGGACTCCTTCTGGATGTTGTAGTC 3174968
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
|| | || |||| ||||||||||| ||||| ||||||||||||||||||||||
Sbjct 3174967 GGACAAAGTACGTCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGG 3174908
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286
|| | || ||||| ||| ||||| ||| | | | |||||||| | || ||
Sbjct 3174907 GGGAATGCCCTCCTTGTCCTGGATCTTAGCCTTGACATTCTCGATGGTGTCCGAGGGCTC 3174848
Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
||||| | || || ||||| || || || ||||| || ||||| ||||||
Sbjct 3174847 GACCTCGAGGGTGATGGTCTTGCCAGTCAGAGTCTTGACAAAGATCTGCATG 3174796
Score = 122 bits (134), Expect = 6e-23
Identities = 166/232 (72%), Gaps = 0/232 (0%)
Strand=Plus/Minus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || | ||| | | ||||| || | ||| |||||| ||||||||||| ||
Sbjct 3175711 CATGCCACCGCGCAGGCGGAGCACCAAATGCAAGGTGGACTCCTTCTGGATGTTGTAGTC 3175652
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
|| | || |||| ||||||||||| ||||| ||||||||||||||||||||||
Sbjct 3175651 GGACAAAGTACGTCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGG 3175592
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286
|| | || ||||| ||| ||||| ||| | | | |||||||| | || ||
Sbjct 3175591 GGGAATGCCCTCCTTGTCCTGGATCTTAGCCTTGACATTCTCGATGGTGTCCGAGGGCTC 3175532
Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
||||| | || || ||||| || || || ||||| || ||||| ||||||
Sbjct 3175531 GACCTCGAGGGTGATGGTCTTGCCAGTCAGAGTCTTGACAAAGATCTGCATG 3175480
>seq12
Length=1235759
Score = 140 bits (154), Expect = 2e-28
Identities = 157/210 (75%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187
||||| ||| || || |||||| ||||||||||| |||| || ||| | || ||
Sbjct 219377 CACCAAGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGGCCATCCTC 219318
Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247
||||||||| ||||| ||||||| |||||||||||||| || | || ||||| |||
Sbjct 219317 CAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGGGGAATGCCCTCCTTGTCCTG 219258
Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307
||||| ||| | | | |||||||| | || || ||||||| || || |||||
Sbjct 219257 GATCTTAGCCTTGACATTCTCGATGGTGTCAGAGGGCTCGACCTCCAAGGTGATGGTCTT 219198
Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| ||||| || |||||||||||||||||
Sbjct 219197 GCCAGTGAGAGTTTTCACGAAGATTTGCAT 219168
>seq6
Length=9197557
Score = 129 bits (142), Expect = 4e-25
Identities = 171/235 (73%), Gaps = 2/235 (1%)
Strand=Plus/Plus
Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163
|| ||| || || | || | || ||||| || || || |||||| |||||||||||
Sbjct 543444 TTGCATACCACCGCGGAGACGCAGCACCAAATGGAGAGTCGACTCCTTCTGGATGTTGTA 543503
Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223
|| | || ||| | || ||||||||||| ||||| ||||| | ||||||||| ||
Sbjct 543504 GTCCGAAAGAGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTC 543563
Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGG 44282
| || | || ||||| ||| ||||| |||| | |||| | |||||||||| |
Sbjct 543564 AGGGGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTC-ACGTTCTCAATGGTGTCGGATG 543622
Query 44283 ATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|||||||||| || || || ||||| || || |||||||||||||| |||||
Sbjct 543623 GCTCCACCTCCAGGGTGATGGTTTTTCCAGTCAGAGTCTTCACGAAGATCTGCAT 543677
Score = 129 bits (142), Expect = 4e-25
Identities = 171/235 (73%), Gaps = 2/235 (1%)
Strand=Plus/Plus
Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163
|| ||| || || | || | || ||||| || || || |||||| |||||||||||
Sbjct 543900 TTGCATACCACCGCGGAGACGCAGCACCAAATGGAGAGTCGACTCCTTCTGGATGTTGTA 543959
Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223
|| | || ||| | || ||||||||||| ||||| ||||| | ||||||||| ||
Sbjct 543960 GTCAGAAAGAGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTC 544019
Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGG 44282
|| ||| | || ||||| ||| ||||| || | | |||| | |||||||||| |
Sbjct 544020 TGGAGGGATTCCCTCCTTGTCCTGGATCTT-GGCCTTTACGTTCTCAATGGTGTCGGATG 544078
Query 44283 ATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|||||||||| || || || ||||| || | ||| ||||| |||||||||||
Sbjct 544079 GCTCCACCTCCAGGGTGATGGTTTTTCCGGTCAAGGTTTTCACAAAGATTTGCAT 544133
Score = 127 bits (140), Expect = 1e-24
Identities = 158/214 (74%), Gaps = 2/214 (1%)
Strand=Plus/Plus
Query 44125 CAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTC 44184
|| ||||| || || || |||||| ||||||||||| || | || ||| | ||
Sbjct 542325 CAGCACCAAATGGAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTGCGGCCATC 542384
Query 44185 GTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTC 44244
||||||||||| || || ||||| | ||||||||| |||| || | || ||||| ||
Sbjct 542385 TTCCAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCTGGGGGGATTCCCTCCTTGTC 542444
Query 44245 CGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCG 44303
| ||||| |||| | |||| | |||||||| | | ||| ||||||| ||||| |
Sbjct 542445 CTGAATCTT-GGCTTTCACGTTCTCAATGGTGTCAGAAGGTTCGACCTCCAGGGTAATAG 542503
Query 44304 TCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
| ||||| || || ||||||||||| ||||||||
Sbjct 542504 TTTTTCCAGTCAGAGTCTTCACGAAAATTTGCAT 542537
Score = 125 bits (138), Expect = 5e-24
Identities = 156/211 (74%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187
||||| || || || |||||| ||||||||||| || | || ||| | || ||
Sbjct 543012 CACCAAATGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTGCGGCCATCCTC 543071
Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247
||||||||| ||||| ||||| | ||||||||| |||| || | || ||||| |||
Sbjct 543072 CAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCTGGGGGGATTCCCTCCTTGTCCTG 543131
Query 44248 TATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306
||||| |||| | |||| | |||||||||| | |||||||||| || || || |
Sbjct 543132 GATCTTGGCCTTC-ACGTTCTCAATGGTGTCGGATGGCTCCACCTCCAGGGTGATGGTTT 543190
Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|||| || | ||| ||||| |||||||||||
Sbjct 543191 TTCCGGTCAAGGTTTTCACAAAGATTTGCAT 543221
Score = 123 bits (136), Expect = 2e-23
Identities = 170/235 (72%), Gaps = 2/235 (1%)
Strand=Plus/Plus
Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163
|| ||| || || | || | || ||||| || || || |||||| |||||||||||
Sbjct 542532 TTGCATACCACCGCGGAGACGCAGCACCAAATGGAGAGTCGACTCCTTCTGGATGTTGTA 542591
Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223
|| | || ||| | || ||||||||||| ||||| ||||| | ||||||||| ||
Sbjct 542592 GTCCGAAAGAGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTC 542651
Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGG 44282
| || | || ||||| ||| ||||| |||| | |||| | |||||||||| |
Sbjct 542652 AGGGGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTC-ACGTTCTCAATGGTGTCGGATG 542710
Query 44283 ATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|||||||||| || || || ||||| || | ||| ||||| |||||||||||
Sbjct 542711 GCTCCACCTCCAGGGTGATGGTTTTTCCGGTCAAGGTTTTCACAAAGATTTGCAT 542765
Score = 123 bits (136), Expect = 2e-23
Identities = 168/232 (72%), Gaps = 2/232 (1%)
Strand=Plus/Plus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || | || | || ||||| || || || |||||| ||||||||||| ||
Sbjct 543675 CATACCACCGCGGAGACGCAGCACCAAATGGAGAGTCGACTCCTTCTGGATGTTGTAGTC 543734
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
| || ||| | || ||||||||||| ||||| ||||| | ||||||||| || |
Sbjct 543735 CGAAAGAGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCAGG 543794
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285
|| | || ||||| ||| ||||| |||| | |||| | |||||||||| | |
Sbjct 543795 GGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTC-ACGTTCTCAATGGTGTCGGATGGCT 543853
Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||||||| || || || ||||| || | ||| ||||| |||||||||||
Sbjct 543854 CCACCTCCAGGGTGATGGTTTTTCCGGTCAAGGTTTTCACAAAGATTTGCAT 543905
Score = 122 bits (134), Expect = 6e-23
Identities = 155/211 (73%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187
||||| || || || |||||| ||||||||||| || | || ||| | || ||
Sbjct 542784 CACCAAATGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTGCGGCCATCCTC 542843
Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247
||||||||| ||||| ||||| | ||||||||| |||| || | || ||||| |||
Sbjct 542844 CAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCTGGGGGGATTCCCTCCTTGTCCTG 542903
Query 44248 TATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306
||||| |||| | |||| | |||||||||| | |||||||||| || || || |
Sbjct 542904 GATCTTGGCCTTC-ACGTTCTCAATGGTGTCGGATGGCTCCACCTCCAGGGTGATGGTTT 542962
Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|||| || | ||| ||||| || ||||||||
Sbjct 542963 TTCCGGTCAAGGTTTTCACAAAAATTTGCAT 542993
Score = 120 bits (132), Expect = 2e-22
Identities = 169/235 (72%), Gaps = 2/235 (1%)
Strand=Plus/Plus
Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163
|| ||| || || | || | || ||||| || || || |||||| |||||||||||
Sbjct 544128 TTGCATACCACCGCGGAGACGCAGCACCAAATGGAGAGTCGACTCCTTCTGGATGTTGTA 544187
Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223
|| | || ||| | || ||||| ||||| ||||| ||||| | ||||||||| ||
Sbjct 544188 GTCCGAAAGAGTGCGGCCATCCTCCAGTTGCTTGCCGGCGAAGATGAGACGCTGCTGGTC 544247
Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGG 44282
|| || | || ||||| ||| ||||| |||| | |||| | |||||||||| |
Sbjct 544248 TGGGGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTC-ACGTTCTCAATGGTGTCGGATG 544306
Query 44283 ATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|||||||||| || || || ||||| || | ||| ||||| ||||| |||||
Sbjct 544307 GCTCCACCTCCAGGGTGATGGTTTTTCCAGTCAAGGTTTTCACAAAGATCTGCAT 544361
Score = 116 bits (128), Expect = 3e-21
Identities = 154/211 (73%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187
||||| || || || |||||| ||||||||||| || | || ||| | || ||
Sbjct 543240 CACCAAATGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTGCGGCCATCCTC 543299
Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247
||||||||| ||||| ||||| | ||||||||| || | || | || ||||| |||
Sbjct 543300 CAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCAGGGGGGATTCCCTCCTTGTCCTG 543359
Query 44248 TATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306
||||| |||| | |||| | |||||||||| | |||||||||| || || || |
Sbjct 543360 GATCTTGGCCTTC-ACGTTCTCAATGGTGTCGGATGGCTCCACCTCCAGGGTGATGGTTT 543418
Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|||| || | ||| ||||| || ||||||||
Sbjct 543419 TTCCGGTCAAGGTTTTCACAAAAATTTGCAT 543449
>seq4631
Length=7852
Score = 105 bits (116), Expect = 5e-18
Identities = 139/193 (72%), Gaps = 0/193 (0%)
Strand=Plus/Minus
Query 44146 CTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAA 44205
|||||| || ||||| ||||| | ||| || | || |||| ||||| || || ||
Sbjct 680 CTCCTTCTGAATGTTATAATCAGACAGTGTTCGGCCATCTTCCAATTGCTTGCCAGCGAA 621
Query 44206 GATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGT 44265
|||||||||||| ||||||| ||| | ||||| || ||| ||||| || | |
Sbjct 620 GATCAAACGCTGTTGATCTGGAGGAATTCCTTCTTTGTCCTGGATCTTGGCTTTGACATT 561
Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325
| | ||||| || | | ||| ||||| | || || ||||| ||||| |||||||| ||
Sbjct 560 TTCGATGGTATCCGACGGTTCGACCTCAAGAGTTATGGTCTTGCCCGTTAGGGTCTTTAC 501
Query 44326 GAAGATTTGCATG 44338
||||| ||||||
Sbjct 500 AAAGATCTGCATG 488
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359969384435430
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |