Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20pseudoobscura_20pseudoobscura_20[refseq_20GCF_5F0000017
65.3_202013-04-11] 4,790 sequences; 152,696,384 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq6 178 3e-39
seq12 159 8e-34
seq3 147 5e-30
seq4631 114 3e-20
>seq6
Length=9197557
Score = 178 bits (196), Expect = 3e-39
Identities = 160/201 (80%), Gaps = 0/201 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|||||||||||||| ||||| || |||||||| || ||||| ||||| ||| || |||
Sbjct 542534 CAAATTTTCGTGAAGACTCTGACTGGAAAAACTATTACCCTGGAGGTCGAACCTTCTGAC 542475
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| |||||||| ||| |||||||||||||| || |||||||| || ||||||||
Sbjct 542474 ACCATTGAGAACGTGAAAGCCAAGATTCAGGACAAGGAGGGAATCCCCCCAGACCAGCAG 542415
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || |||||||| || || ||||| |||||||| | |||||| | || || ||| ||
Sbjct 542414 CGTCTCATCTTCGCTGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCGGACTACAACATC 542355
Query 178104 CAAAAAGAATCAACACTGCAT 178124
|| || || || || || |||
Sbjct 542354 CAGAAGGAGTCGACTCTCCAT 542334
Score = 168 bits (186), Expect = 2e-36
Identities = 158/201 (79%), Gaps = 0/201 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|||||||| |||||||| | || |||||||| |||||||| |||||||| || |||
Sbjct 542990 CAAATTTTTGTGAAAACCTTGACCGGAAAAACCATCACCCTGGAGGTGGAGCCATCCGAC 542931
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| |||||||| || ||||| |||||||| || |||||||| || ||||||||
Sbjct 542930 ACCATTGAGAACGTGAAGGCCAAGATCCAGGACAAGGAGGGAATCCCCCCAGACCAGCAG 542871
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || ||||||||||| || ||||| || ||||| | |||||| | || || ||| ||
Sbjct 542870 CGTCTCATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGCACTCTTTCGGACTACAACATC 542811
Query 178104 CAAAAAGAATCAACACTGCAT 178124
|| || || || || ||||||
Sbjct 542810 CAGAAGGAGTCGACTCTGCAT 542790
Score = 168 bits (186), Expect = 2e-36
Identities = 158/201 (79%), Gaps = 0/201 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| || |||||||| | || |||||||| |||||||| |||||||| || |||
Sbjct 543218 CAAATCTTTGTGAAAACCTTGACCGGAAAAACCATCACCCTGGAGGTGGAGCCATCCGAC 543159
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| |||||||| || ||||| |||||||| || |||||||| || ||||||||
Sbjct 543158 ACCATTGAGAACGTGAAGGCCAAGATCCAGGACAAGGAGGGAATCCCCCCAGACCAGCAG 543099
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || |||||||||||||| ||||| || ||||| | |||||| | || || ||| ||
Sbjct 543098 CGTCTCATCTTCGCCGGAAAGCAGCTGGAGGATGGCCGCACTCTTTCGGACTACAACATC 543039
Query 178104 CAAAAAGAATCAACACTGCAT 178124
|| || || || || ||||||
Sbjct 543038 CAGAAGGAGTCGACTCTGCAT 543018
Score = 168 bits (186), Expect = 2e-36
Identities = 158/201 (79%), Gaps = 0/201 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|||||||| |||||||| | || |||||||| |||||||| |||||||| || |||
Sbjct 543446 CAAATTTTTGTGAAAACCTTGACCGGAAAAACCATCACCCTGGAGGTGGAGCCATCCGAC 543387
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| |||||||| || ||||| |||||||| || |||||||| || ||||||||
Sbjct 543386 ACCATTGAGAACGTGAAGGCCAAGATCCAGGACAAGGAGGGAATCCCCCCTGACCAGCAG 543327
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || ||||||||||| || ||||| || ||||| | |||||| | || || ||| ||
Sbjct 543326 CGTCTCATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGCACTCTTTCGGACTACAACATC 543267
Query 178104 CAAAAAGAATCAACACTGCAT 178124
|| || || || || ||||||
Sbjct 543266 CAGAAGGAGTCGACTCTGCAT 543246
Score = 165 bits (182), Expect = 2e-35
Identities = 157/201 (78%), Gaps = 0/201 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || |||||||| ||||| || |||||||| |||||||| |||||||| || |||
Sbjct 543674 CAGATCTTCGTGAAGACTCTGACTGGAAAAACCATCACCCTGGAGGTGGAGCCATCCGAC 543615
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| |||||||| || ||||| |||||||| || |||||||| || ||||||||
Sbjct 543614 ACCATTGAGAACGTGAAGGCCAAGATCCAGGACAAGGAGGGAATCCCCCCTGACCAGCAG 543555
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || ||||||||||| || ||||| || ||||| | |||||| | || || ||| ||
Sbjct 543554 CGTCTCATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGCACTCTTTCGGACTACAACATC 543495
Query 178104 CAAAAAGAATCAACACTGCAT 178124
|| || || || || || |||
Sbjct 543494 CAGAAGGAGTCGACTCTCCAT 543474
Score = 165 bits (182), Expect = 2e-35
Identities = 157/201 (78%), Gaps = 0/201 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| || |||||||| | || |||||||| |||||||| |||||||| || |||
Sbjct 544130 CAAATCTTTGTGAAAACCTTGACCGGAAAAACCATCACCCTGGAGGTGGAGCCATCCGAC 544071
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| |||||||| || ||||| |||||||| || ||||||||||| ||||||||
Sbjct 544070 ACCATTGAGAACGTAAAGGCCAAGATCCAGGACAAGGAGGGAATCCCTCCAGACCAGCAG 544011
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || ||||||||||| || ||||| || ||||| | |||||| | || || ||| ||
Sbjct 544010 CGTCTCATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGCACTCTTTCTGACTACAACATC 543951
Query 178104 CAAAAAGAATCAACACTGCAT 178124
|| || || || || || |||
Sbjct 543950 CAGAAGGAGTCGACTCTCCAT 543930
Score = 159 bits (176), Expect = 8e-34
Identities = 156/201 (78%), Gaps = 0/201 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| || |||||||| | || |||||||| |||||||| |||||||| || |||
Sbjct 542762 CAAATCTTTGTGAAAACCTTGACCGGAAAAACCATCACCCTGGAGGTGGAGCCATCCGAC 542703
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| |||||||| || ||||| |||||||| || |||||||| || ||||||||
Sbjct 542702 ACCATTGAGAACGTGAAGGCCAAGATCCAGGACAAGGAGGGAATCCCCCCTGACCAGCAG 542643
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || ||||||||||| || ||||| || ||||| | |||||| | || || ||| ||
Sbjct 542642 CGTCTCATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGCACTCTTTCGGACTACAACATC 542583
Query 178104 CAAAAAGAATCAACACTGCAT 178124
|| || || || || || |||
Sbjct 542582 CAGAAGGAGTCGACTCTCCAT 542562
Score = 159 bits (176), Expect = 8e-34
Identities = 156/201 (78%), Gaps = 0/201 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| || |||||||| | || |||||||| |||||||| |||||||| || |||
Sbjct 543902 CAAATCTTTGTGAAAACCTTGACCGGAAAAACCATCACCCTGGAGGTGGAGCCATCCGAC 543843
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| |||||||| || ||||| |||||||| || |||||||| || ||||||||
Sbjct 543842 ACCATTGAGAACGTGAAGGCCAAGATCCAGGACAAGGAGGGAATCCCCCCTGACCAGCAG 543783
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || ||||||||||| || ||||| || ||||| | |||||| | || || ||| ||
Sbjct 543782 CGTCTCATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGCACTCTTTCGGACTACAACATC 543723
Query 178104 CAAAAAGAATCAACACTGCAT 178124
|| || || || || || |||
Sbjct 543722 CAGAAGGAGTCGACTCTCCAT 543702
Score = 152 bits (168), Expect = 1e-31
Identities = 160/210 (76%), Gaps = 3/210 (1%)
Strand=Plus/Minus
Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974
||||||| | || || |||||||| | || |||||||| |||||||| ||||||||
Sbjct 544364 AAAATGC---AGATCTTTGTGAAAACCTTGACTGGAAAAACCATCACCCTGGAGGTGGAG 544308
Query 177975 AGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCG 178034
|| |||||||| |||||||| || ||||| |||||||| || |||||||| ||
Sbjct 544307 CCATCCGACACCATTGAGAACGTGAAGGCCAAGATCCAGGACAAGGAGGGAATCCCCCCA 544248
Query 178035 GACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGAT 178094
|||||||| || || ||||||||||| || || || || ||||| | |||||| | ||
Sbjct 544247 GACCAGCAGCGTCTCATCTTCGCCGGCAAGCAACTGGAGGATGGCCGCACTCTTTCGGAC 544188
Query 178095 TATAACGTCCAAAAAGAATCAACACTGCAT 178124
|| ||| |||| || || || || || |||
Sbjct 544187 TACAACATCCAGAAGGAGTCGACTCTCCAT 544158
>seq12
Length=1235759
Score = 159 bits (176), Expect = 8e-34
Identities = 165/214 (77%), Gaps = 4/214 (2%)
Strand=Plus/Plus
Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974
||||||| |||| ||||||||||||||||| || || || |||||| | ||||| ||
Sbjct 219165 AAAATGC---AAATCTTCGTGAAAACTCTCACTGGCAAGACCATCACCTTGGAGGTCGAG 219221
Query 177975 AGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCG 178034
||| |||||||||||||| ||||| ||||| |||||||| || || || || ||
Sbjct 219222 CCCTCTGACACCATCGAGAATGTCAAGGCTAAGATCCAGGACAAGGAGGGCATTCCCCCA 219281
Query 178035 GACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGAT 178094
|| ||||| || || ||||||||||| || ||||| || ||||| | ||||| ||||
Sbjct 219282 GATCAGCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGCACTCTGTCCGAC 219341
Query 178095 TATAACGTCCAAAAAGAATCAACACTGCATCTTG 178128
|| ||| |||| || || || || ||||| ||||
Sbjct 219342 TACAACATCCAGAAGGAGTCGACCCTGCA-CTTG 219374
>seq3
Length=12541198
Score = 147 bits (162), Expect = 5e-30
Identities = 153/201 (76%), Gaps = 0/201 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || |||||||| ||||| || || || || |||||||||||||| || ||| |||
Sbjct 3175256 CAGATCTTCGTGAAGACTCTGACTGGCAAGACCATCACCCTCGAGGTCGAGCCCTCGGAC 3175315
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||||||||| ||||| ||||| |||||||| || || || || || || |||||
Sbjct 3175316 ACCATCGAGAATGTCAAGGCTAAGATCCAGGACAAGGAGGGCATTCCCCCAGATCAGCAG 3175375
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | ||||||||||| || ||||| || || ||| | ||| | ||||||| ||| ||
Sbjct 3175376 CGTTTGATCTTCGCCGGCAAGCAGCTGGAGGACGGACGTACTTTGTCCGATTACAACATC 3175435
Query 178104 CAAAAAGAATCAACACTGCAT 178124
|| || || || || |||||
Sbjct 3175436 CAGAAGGAGTCCACCTTGCAT 3175456
Score = 141 bits (156), Expect = 2e-28
Identities = 160/211 (76%), Gaps = 5/211 (2%)
Strand=Plus/Plus
Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974
||||||| | || |||||||| || || || || || || |||||||||||||| ||
Sbjct 3173882 AAAATGC---AGATCTTCGTGAAGACCCTGACTGGCAAGACCATCACCCTCGAGGTTGAG 3173938
Query 177975 AGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCG 178034
||| |||||||||||||| ||||| ||||| |||||||| || || || || ||
Sbjct 3173939 CCCTCGGACACCATCGAGAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCA 3173998
Query 178035 GACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGA 178093
|| ||||| || | ||||||||||| || ||||| || || ||| | || |||| ||||
Sbjct 3173999 GATCAGCAGCGTTTGATCTTCGCCGGCAAGCAGCTGGAGGACGGACGTAC-CTTGTCCGA 3174057
Query 178094 TTATAACGTCCAAAAAGAATCAACACTGCAT 178124
||| ||| |||| || || || || |||||
Sbjct 3174058 TTACAACATCCAGAAGGAGTCCACCTTGCAT 3174088
Score = 138 bits (152), Expect = 3e-27
Identities = 151/201 (75%), Gaps = 0/201 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || || || || ||||| || || || || |||||||||||||| || ||| |||
Sbjct 3174344 CAGATCTTTGTCAAGACTCTGACTGGCAAGACCATCACCCTCGAGGTCGAGCCCTCGGAC 3174403
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||||||||| ||||| ||||| |||||||| || || || || || || |||||
Sbjct 3174404 ACCATCGAGAATGTCAAGGCTAAGATCCAGGACAAGGAGGGCATTCCCCCAGATCAGCAG 3174463
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | ||||||||||| || ||||| || || ||| | ||| | ||||||| ||| ||
Sbjct 3174464 CGTTTGATCTTCGCCGGCAAGCAGCTGGAGGACGGACGTACTTTGTCCGATTACAACATC 3174523
Query 178104 CAAAAAGAATCAACACTGCAT 178124
|| || || || || |||||
Sbjct 3174524 CAGAAGGAGTCCACCTTGCAT 3174544
Score = 138 bits (152), Expect = 3e-27
Identities = 151/201 (75%), Gaps = 0/201 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || || || || ||||| || || || || |||||||||||||| || ||| |||
Sbjct 3174572 CAGATCTTTGTCAAGACTCTGACTGGCAAGACCATCACCCTCGAGGTCGAGCCCTCGGAC 3174631
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||||||||| ||||| ||||| |||||||| || || || || || || |||||
Sbjct 3174632 ACCATCGAGAATGTCAAGGCTAAGATCCAGGACAAGGAGGGCATTCCCCCAGATCAGCAG 3174691
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | ||||||||||| || ||||| || || ||| | ||| | ||||||| ||| ||
Sbjct 3174692 CGTTTGATCTTCGCCGGCAAGCAGCTGGAGGACGGACGTACTTTGTCCGATTACAACATC 3174751
Query 178104 CAAAAAGAATCAACACTGCAT 178124
|| || || || || |||||
Sbjct 3174752 CAGAAGGAGTCCACCTTGCAT 3174772
Score = 136 bits (150), Expect = 1e-26
Identities = 154/205 (75%), Gaps = 1/205 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || || || || ||||| || || || || |||||||||||||| || ||| |||
Sbjct 3175712 CAGATCTTTGTCAAGACTCTGACTGGCAAGACCATCACCCTCGAGGTCGAGCCCTCGGAC 3175771
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||||||||| ||||| ||||| |||||||| || || || || || || |||||
Sbjct 3175772 ACCATCGAGAATGTCAAGGCTAAGATCCAGGACAAGGAGGGCATTCCCCCAGATCAGCAG 3175831
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | ||||||||||| || ||||| || || ||| | ||| | ||||||| ||| ||
Sbjct 3175832 CGTTTGATCTTCGCCGGCAAGCAGCTGGAGGACGGACGTACTTTGTCCGATTACAACATC 3175891
Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128
|| || || || || |||| ||||
Sbjct 3175892 CAGAAGGAGTCCACTTTGCA-CTTG 3175915
Score = 132 bits (146), Expect = 1e-25
Identities = 150/201 (75%), Gaps = 0/201 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || || || || ||||| || || || || |||||||||||||| || ||| |||
Sbjct 3174116 CAGATCTTTGTCAAGACTCTGACTGGCAAGACTATCACCCTCGAGGTCGAGCCCTCGGAC 3174175
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||||||||| ||||| ||||| |||||||| || || || || || || |||||
Sbjct 3174176 ACCATCGAGAATGTCAAGGCTAAGATCCAGGACAAGGAGGGCATTCCCCCAGATCAGCAG 3174235
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | ||||||||||| || ||||| || || ||| | ||| | |||| || ||| ||
Sbjct 3174236 CGTTTGATCTTCGCCGGCAAGCAGCTGGAGGACGGACGTACTTTGTCCGACTACAACATC 3174295
Query 178104 CAAAAAGAATCAACACTGCAT 178124
|| || || || || |||||
Sbjct 3174296 CAGAAGGAGTCCACCTTGCAT 3174316
Score = 132 bits (146), Expect = 1e-25
Identities = 150/201 (75%), Gaps = 0/201 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || || || || ||||| || || || || |||||||||||||| || ||| |||
Sbjct 3174800 CAGATCTTTGTCAAGACTCTGACTGGCAAGACCATCACCCTCGAGGTCGAGCCCTCGGAC 3174859
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||||||||| ||||| ||||| |||||||| || || || || || || |||||
Sbjct 3174860 ACCATCGAGAATGTCAAGGCTAAGATCCAGGACAAGGAGGGCATTCCCCCAGATCAGCAG 3174919
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | ||||||||||| || ||||| || || ||| | ||| | |||| || ||| ||
Sbjct 3174920 CGTTTGATCTTCGCCGGCAAGCAGCTGGAGGACGGACGTACTTTGTCCGACTACAACATC 3174979
Query 178104 CAAAAAGAATCAACACTGCAT 178124
|| || || || || |||||
Sbjct 3174980 CAGAAGGAGTCCACCTTGCAT 3175000
Score = 132 bits (146), Expect = 1e-25
Identities = 153/205 (75%), Gaps = 1/205 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || || || || ||||| || || || || |||||||||||||| || ||| |||
Sbjct 3175028 CAGATCTTTGTCAAGACTCTGACTGGCAAGACCATCACCCTCGAGGTCGAGCCCTCGGAC 3175087
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||||||||| ||||| ||||| |||||||| || || || || || || |||||
Sbjct 3175088 ACCATCGAGAATGTCAAGGCTAAGATCCAGGACAAGGAGGGCATTCCCCCAGATCAGCAG 3175147
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | ||||||||||| || ||||| || || ||| | ||| | |||| || ||| ||
Sbjct 3175148 CGTTTGATCTTCGCCGGCAAGCAGCTGGAGGACGGACGTACTTTGTCCGACTACAACATC 3175207
Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128
|| || || || || || || ||||
Sbjct 3175208 CAGAAGGAGTCGACCCTCCA-CTTG 3175231
Score = 132 bits (146), Expect = 1e-25
Identities = 150/201 (75%), Gaps = 0/201 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || || || || ||||| || || || || |||||||||||||| || ||| |||
Sbjct 3175484 CAGATCTTTGTCAAGACTCTGACTGGCAAGACCATCACCCTCGAGGTCGAGCCCTCGGAC 3175543
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||||||||| ||||| ||||| |||||||| || || || || || || |||||
Sbjct 3175544 ACCATCGAGAATGTCAAGGCTAAGATCCAGGACAAGGAGGGCATTCCCCCAGATCAGCAG 3175603
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | ||||||||||| || ||||| || || ||| | ||| | |||| || ||| ||
Sbjct 3175604 CGTTTGATCTTCGCCGGCAAGCAGCTGGAGGACGGACGTACTTTGTCCGACTACAACATC 3175663
Query 178104 CAAAAAGAATCAACACTGCAT 178124
|| || || || || |||||
Sbjct 3175664 CAGAAGGAGTCCACCTTGCAT 3175684
>seq4631
Length=7852
Score = 114 bits (126), Expect = 3e-20
Identities = 146/201 (73%), Gaps = 0/201 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || || || || || || || || || || || || || ||||| ||| || ||
Sbjct 492 CAGATCTTTGTAAAGACCCTAACGGGCAAGACCATAACTCTTGAGGTCGAACCGTCGGAT 551
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| || |||||| ||||| ||||||||||||||||| ||||| || || ||
Sbjct 552 ACCATCGAAAATGTCAAAGCCAAGATCCAGGACAAAGAAGGAATTCCTCCAGATCAACAG 611
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | |||||||| || || || | |||||||| | || || | ||||||||| |
Sbjct 612 CGTTTGATCTTCGCTGGCAAGCAATTGGAAGATGGCCGAACACTGTCTGATTATAACATT 671
Query 178104 CAAAAAGAATCAACACTGCAT 178124
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Sbjct 672 CAGAAGGAGTCTACCTTGCAT 692
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203657324759260
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |