Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20rhopaloa_20[refseq_20GCF_5F000236305.1_202013-02-22] 22,819 sequences; 197,375,704 total letters Query= AC_000013.1 Length=45063 Score E Sequences producing significant alignments: (Bits) Value seq22465 82.4 2e-11 >seq22465 Length=63631 Score = 82.4 bits (90), Expect = 2e-11 Identities = 122/173 (71%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 1048 TACGGGCGCATAGCCCCTCGTTCGGGCTTGGCCGTAAAGTTTTTTATCGATGTGGGAGCC 1107 ||||| || | ||||| || || || ||||||| ||| || ||||||||||| ||| Sbjct 17240 TACGGCCGTGTGGCCCCACGGTCCGGACTGGCCGTGAAGAACTTCATCGATGTGGGCGCC 17299 Query 1108 GGTGTTATCGATAGCGATTACCGGGGCATCGTTAGCGTCCTCCTTTTCAATTTTTCGGAC 1167 ||||| | ||| |||||||| |||| | | ||||| | || |||||| |||||| Sbjct 17300 GGTGTGGTGGATGAGGATTACCGCGGCAACCTCGGCGTCGTTCTGTTCAATCACTCGGAC 17359 Query 1168 CACAATTTCAACGTCCGTCGGGGCGATCGCATAGCTCAGTTAATTTTGGAGCG 1220 | || | || || ||||| ||||| ||||| || |||| ||||| Sbjct 17360 GTGGAGTTTGAGGTGAAGCGCGGCGACCGCATCGCTCAATTCATTTGCGAGCG 17412 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 144040957831950