Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20rhopaloa_20[refseq_20GCF_5F000236305.1_202013-02-22] 22,819 sequences; 197,375,704 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq8502 405 6e-108 seq1813 405 6e-108 seq8501 401 7e-107 >seq8502 Length=4749 Score = 405 bits (448), Expect = 6e-108 Identities = 1214/1864 (65%), Gaps = 31/1864 (2%) Strand=Plus/Plus Query 52808 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 52867 ||||| ||||| | | || || || || || || || ||||||||||| || || || Sbjct 1164 GTGAACTGAATTGCATTGGCGGCTGGCTTTGTGCGCAGGTAGTACATTCCGGTCTTAAGT 1223 Query 52868 CCGAGACTCCATCCGTAAAAATGCATACTTGTTAGTTTGGAATAACTCGGATCTGCTATA 52927 || |||| |||||| || || || | ||| ||| | || || || | | Sbjct 1224 CCAGCTTTCCAAGAGTAAAAGTGAATGGACGTCAATTTTCCATAGTTTGGCTCAGCCACA 1283 Query 52928 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 52987 || ||||| | || |||||||| || || || || || | || || |||||||| || Sbjct 1284 TGAATATTGAACGACTGACTTTGGTCTATAAACGCCCCACGATCAGCGGCCATTTTAATT 1343 Query 52988 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAAC-TCGCTTAATATCTTCTGGAAG 53046 | | ||| || |||||||| | |||||| |||| |||| | | ||| | | | Sbjct 1344 GTGGACTTCACTGAGATTTCCCACACAGTTTTGTAAAGATCGCGAACTTTCTGGGGAATG 1403 Query 53047 GTTTGTATTC--TGAATAGATCCACCATCTACCA-TAATCCTATTCTTGATCTCATCATT 53103 || | || | || || || || || || | | ||| ||||| || || |||| Sbjct 1404 GTCTCAATACCTTGGATGGAGCC-CCTGCTGGAAATGATCTGGTTCTTCATGTCGTCATC 1462 Query 53104 CCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCC 53163 ||| || | ||| ||||| | || | | ||| | || || || || ||||| || Sbjct 1463 CCACAAGTCGAGCTCAGTTAAGTCCCTCAACAAATGATGGTTGACCACCTGGAATTCACC 1522 Query 53164 AGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATTTCC 53223 ||||| |||| | || ||||| || ||||||| || || | ||| || || ||||| Sbjct 1523 AGACAGAACTCGTCTGGTATAAATGTTCGTGGTATAGGGCTCGAAAGATTCGTTGTTTCC 1582 Query 53224 CAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACC 53283 || |||||||||||| || ||||| |||||||| || || | | || | | ||| Sbjct 1583 CATAATTTGAGCAGTAGACGCAGTAGGCATAGGGGCAACAAGCAGGGAGTTCCGGACACC 1642 Query 53284 GTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACNNN 53343 || || |||| || ||||| || ||||| ||| || | || || Sbjct 1643 GTGCTTTTTGATGGACTCCTTTAGTTTTTGCCAATCCCACAGGTTCGTTGGCTGTTTGTC 1702 Query 53344 NNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTATCGTATGG 53403 || ||||| || || || || ||| |||| || || || || Sbjct 1703 CCACATGTCGTACTGCAGAATTCCTTTGCTCACGGGGCTTCCCTCATAGGTCTCATAGGG 1762 Query 53404 TCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAA 53463 ||||| || || |||||||| || || || | |||||||| ||||| ||||| || Sbjct 1763 ACCTTCGACCTGCGCCAGTTCACAGCTGGCTTCCAGGGCACCGTAGTAAATCGTTTCAAA 1822 Query 53464 GATCTTCTTATTTA----GATCTTGTGCTTCCAGGCTATCAAATGGATAATTTAAGAGAA 53519 |||| || ||| | || | | |||| || ||| |||| | | ||||| Sbjct 1823 TATCTGCTGATTCAAAAAGACCGGCTTCTTCA---CTTTCATATGGGAATCGCATGAGAA 1879 Query 53520 TAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGA 53579 | || ||||| || || || |||||||| || || | || | ||||||| ||| || Sbjct 1880 TCAAGGCGTCAGCGAAACCCTGAACACCGATGCCCACGGGACGATGTCTCAAATTGGATT 1939 Query 53580 TTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGGTTTCTGACAA 53639 | | || ||||| | |||||| | || ||||| || || || ||||| ||| || || Sbjct 1940 TCTTTGCCTCTGGGAGGGGATAAAAGTTGATATCAATTATCTTGTTGAGATTTTTGGTAA 1999 Query 53640 TTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATTGTCCATC---TATTACAAACA 53696 ||| || ||||| ||||| | |||||||||| | || | | ||||||| Sbjct 2000 CCGTCTTGGTAACTTCCTTAAGTTTCTGGAAATCAAATTTTTTCTCGGGTGTGACAAACA 2059 Query 53697 TGTTCAATGCAATAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTA 53756 |||| | || || |||||||| || || || || | ||||| | | ||||| | Sbjct 2060 TGTTAAGAGCGATGGATGCCAGGTTGCACACTGCAATCTCATCCGGCGAGGAATATTCAA 2119 Query 53757 TTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTT 53816 || || ||||| | || || ||||| ||||| || | || || || || || || Sbjct 2120 CGATTTCTGTGCACAAGTTGCTGCACTTAATGGTGCCAACGTTCTGCTGGTTGCTTTTCC 2179 Query 53817 TGTTACACGCATCCTTATAAAGAATGAATGGCGTACCAGTTTCAATCTGGGATTCTATAA 53876 |||| || |||||||| | || || | || | |||||||| | ||| || || |||| Sbjct 2180 TGTTGCAGGCATCCTTGAAGAGCATATACGGGTTGCCAGTTTCCACCTGCGACTCAATAA 2239 Query 53877 TCGCTTTCCAGACGACACGAGCCTTTATTATA-GATTTGTATCTCTTTTCTCTT--TCGT 53933 | || ||| | | ||||||| | | | || | | | ||||| |||| Sbjct 2240 TGGCAAACCACAAGGACTGAGCCTTGACCGTTCGGTTCGCACGACC---CTCTTGCTCGT 2296 Query 53934 AT--AGTGTATACAATCGTTCAAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTC 53991 || |||||| | || || || || || ||||| |||| || || || || |||| Sbjct 2297 ATTTAGTGTACAGCTTC--TCGAATTCATCGCCCCAGACATCGTGCAGGCCCGGGCATTT 2354 Query 53992 ATCCGGACACATCAACGACCACTCTCCGTCAT---CCTTCACTCGTTTCATAAAGAGATC 54048 | ||| ||||||| |||||| | || |||| ||| || |||||||| |||||||| Sbjct 2355 GTGCGGGCACATCAGCGACCAAT-TC--TCATTGGCCTCGACGCGTTTCATGAAGAGATC 2411 Query 54049 AGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTT 54108 || |||||||| || ||| ||||| | || | || ||||| || || || || || Sbjct 2412 GGGTATCCAAAGGGCGTAAAACAGATCGCGGGCGCGATTCTCCTCCTTGCCAGTGTTTTT 2471 Query 54109 TTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGTCATAAC 54168 || || || || ||| | | | ||| || ||||| || |||| ||| |||| | | Sbjct 2472 CTTGAGTTCCAGAAACTCAAAGACATCCGAGTGCCAGGGCTCCAGGTAAATGGCAAAGGC 2531 Query 54169 TCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAA 54228 || || || ||| || |||||||| | || | || || || | || |||| Sbjct 2532 ACCGGGACGCTTGCCGCCACCCTGATCCACATAGCGTGCCACATTGTTGAAGACCCTCAG 2591 Query 54229 CATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACG 54288 ||| |||| | |||||||| | ||||| || ||| | ||| || | || | || || Sbjct 2592 CATGGGAACTAGGCCATTGGAAGTGCCATTCGTGCCGCAAATAGAGGTGCCTTTTGCCCG 2651 Query 54289 AATATTACTAATTGATAGACCTATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTT 54348 || | || || || || || |||||| ||| ||||| | ||||| ||| Sbjct 2652 GATGCAATGAACATTCAGTCCAATGCCACCTGCCGATTTCGAGATCATGGCGCAGTGTTC 2711 Query 54349 TAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGA 54408 | || | | |||||||||| || ||| || ||||| | | || |||||| ||| Sbjct 2712 CACCGATTTAAAGATGCCCTCGATCGAGTCAGCCGTCATGGTCAAAAGGAAACAGGAAGA 2771 Query 54409 CATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTT 54468 || || | ||| | || | || ||| | || || || ||||| || || || Sbjct 2772 CAGCTGCGGGCGATTTGTGGCAGCGGCAAAAAGCGTTGGCGATGCGTGGGTGAAGAATCG 2831 Query 54469 TTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCTATATCCCATTGATGAATTCCTAC 54528 ||||| | || ||||| || || | || | || |||||| | ||| ||||||| Sbjct 2832 CTCAGACAAAAGGTTGTAGGTTTCCACGGCCGCATCAATATCCTCTCCATGGATTCCTAT 2891 Query 54529 TGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAGCAA 54588 ||| || ||||| |||||||| || || | || ||||||| ||| | ||||||| Sbjct 2892 TGCCACGCGCATCAACATGTGTTGCGGACGCTCGGCGATCTTTCCATTTCTCTTCAGCAG 2951 Query 54589 GTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAAT 54648 || || ||| | ||||| || |||||||||||||| ||| || || || ||||| Sbjct 2952 ATAAGAACGTTCGAGGGTTTTGAATCCAAAATAGTTGTACCCAAAATCACGATCATAAAT 3011 Query 54649 AATA 54652 ||| Sbjct 3012 TATA 3015 >seq1813 Length=4749 Score = 405 bits (448), Expect = 6e-108 Identities = 1211/1860 (65%), Gaps = 24/1860 (1%) Strand=Plus/Plus Query 52808 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 52867 ||||| ||||| | | || || || || || || || ||||||||||| || || || Sbjct 1164 GTGAACTGAATTGCATTGGCGGCTGGCTTTGTGCGCAGGTAGTACATTCCGGTCTTAAGT 1223 Query 52868 CCGAGACTCCATCCGTAAAAATGCATACTTGTTAGTTTGGAATAACTCGGATCTGCTATA 52927 || |||| |||||| || || || | ||| ||| | || || || | | Sbjct 1224 CCAGCTTTCCAAGAGTAAAAGTGAATGGACGTCAATTTTCCATAGTTTGGCTCAGCCACA 1283 Query 52928 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 52987 || ||||| | || |||||||| || || || || || | || || |||||||| || Sbjct 1284 TGAATATTGAACGACTGACTTTGGTCTATAAACGCCCCACGATCAGCGGCCATTTTAATT 1343 Query 52988 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAAC-TCGCTTAATATCTTCTGGAAG 53046 | | ||| || |||||||| | |||||| |||| |||| | | ||| | | | Sbjct 1344 GTGGACTTCACTGAGATTTCCCACACAGTTTTGTAAAGATCGCGAACTTTCTGGGGAATG 1403 Query 53047 GTTTGTATTC--TGAATAGATCCACCATCTACCA-TAATCCTATTCTTGATCTCATCATT 53103 || | || | || || || || || || | | ||| ||||| || || |||| Sbjct 1404 GTCTCAATACCTTGGATGGAGCC-CCTGCTGGAAATGATCTGGTTCTTCATGTCGTCATC 1462 Query 53104 CCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCC 53163 ||| || | ||| ||||| | || | | ||| | || || || || ||||| || Sbjct 1463 CCACAAGTCGAGCTCAGTTAAGTCCCTCAACAAATGATGGTTGACCACCTGGAATTCACC 1522 Query 53164 AGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATTTCC 53223 ||||| |||| | || ||||| || ||||||| || || | ||| || || ||||| Sbjct 1523 AGACAGAACTCGTCTGGTATAAATGTTCGTGGTATAGGGCTCGAAAGATTCGTTGTTTCC 1582 Query 53224 CAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACC 53283 || |||||||||||| || ||||| |||||||| || || | | || | | ||| Sbjct 1583 CATAATTTGAGCAGTAGACGCAGTAGGCATAGGGGCAACAAGCAGGGAGTTCCGGACACC 1642 Query 53284 GTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACNNN 53343 || || |||| || ||||| || ||||| ||| || | || || Sbjct 1643 GTGCTTTTTGATGGACTCCTTTAGTTTTTGCCAATCCCACAGGTTCGTTGGCTGTTTGTC 1702 Query 53344 NNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTATCGTATGG 53403 || ||||| || || || || ||| |||| || || || || Sbjct 1703 CCACATGTCGTACTGCAGAATTCCTTTGCTCACGGGGCTTCCCTCATAGGTCTCATAGGG 1762 Query 53404 TCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAA 53463 ||||| || || |||||||| || || || | |||||||| ||||| ||||| || Sbjct 1763 ACCTTCGACCTGCGCCAGTTCACAGCTGGCTTCCAGGGCACCGTAGTAAATCGTTTCAAA 1822 Query 53464 GATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAATTTAAGAGAATAAA 53523 |||| || ||| | | || || || ||| |||| | | |||||| || Sbjct 1823 TATCTGCTGATTCAAAAGACCGGCCTCTTCACTTTCATATGGGAATCGCATGAGAATCAA 1882 Query 53524 CGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTC 53583 ||||| || || || |||||||| || || | || | ||||||| ||| || | | Sbjct 1883 GGCGTCAGCGAAACCCTGAACACCGATGCCCACGGGACGATGTCTCAAATTGGATTTCTT 1942 Query 53584 AGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGGTTTCTGACAATTAC 53643 || ||||| | |||||| | || ||||| || || || ||||| ||| || || Sbjct 1943 TGCCTCTGGGAGGGGATAAAAGTTGATATCAATTATCTTGTTGAGATTTTTGGTAACCGT 2002 Query 53644 TTTGACCACATCCTTCAGTTTGAGAAAATCAAATTGTCCATC---TATTACAAACATGTT 53700 ||| || ||||| ||||| | |||||||||| | || | | ||||||||||| Sbjct 2003 CTTGGTAACTTCCTTAAGTTTCTGGAAATCAAATTTTTTCTCGGGTGTGACAAACATGTT 2062 Query 53701 CAATGCAATAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTAT 53760 | || || |||||||| || || || || | ||||| | | ||||| | || Sbjct 2063 AAGAGCGATGGATGCCAGGTTGCACACTGCAATCTCATCCGGCGAGGAATATTCAACGAT 2122 Query 53761 CTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTT 53820 || ||||| | || || ||||| ||||| || | || || || || || || |||| Sbjct 2123 TTCTGTGCACAAGTTGCTGCACTTAATGGTGCCAACGTTCTGCTGGTTGCTTTTCCTGTT 2182 Query 53821 ACACGCATCCTTATAAAGAATGAATGGCGTACCAGTTTCAATCTGGGATTCTATAATCGC 53880 || |||||||| | || || | || | |||||||| | ||| || || ||||| || Sbjct 2183 GCAGGCATCCTTGAAGAGCATATACGGGTTGCCAGTTTCCACCTGCGACTCAATAATGGC 2242 Query 53881 TTTCCAGACGACACGAGCCTTTATTATA-GATTTGTATCTCTTTTCTCTT--TCGTAT-- 53935 ||| | | ||||||| | | | || | | | ||||| |||||| Sbjct 2243 AAACCACAAGGACTGAGCCTTGACCGTTCGGTTCGCACGACC---CTCTTGCTCGTATTT 2299 Query 53936 AGTGTATACAATCGTTCAAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCC 53995 |||||| | || || || || || ||||| |||| || || || || |||| | | Sbjct 2300 AGTGTACAGCTTC--TCGAATTCATCGCCCCAGACATCGTGCAGGCCCGGGCATTTGTGC 2357 Query 53996 GGACACATCAACGACCACTCTCCGTCAT---CCTTCACTCGTTTCATAAAGAGATCAGGA 54052 || ||||||| |||||| | || |||| ||| || |||||||| |||||||| || Sbjct 2358 GGGCACATCAGCGACCAAT-TC--TCATTGGCCTCGACGCGTTTCATGAAGAGATCGGGT 2414 Query 54053 ATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTA 54112 |||||||| || ||| ||||| | || | || ||||| || || || || || || Sbjct 2415 ATCCAAAGGGCGTAAAACAGATCGCGGGCGCGATTCTCCTCCTTGCCAGTGTTTTTCTTG 2474 Query 54113 AGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCA 54172 || || || ||| | | | ||| || ||||| || |||| ||| |||| | | || Sbjct 2475 AGTTCCAGAAACTCAAAGACATCCGAGTGCCAGGGCTCCAGGTAAATGGCAAAGGCACCG 2534 Query 54173 GGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATT 54232 || || ||| || |||||||| | || | || || || | || |||| ||| Sbjct 2535 GGACGCTTGCCGCCACCCTGATCCACATAGCGTGCCACATTGTTGAAGACCCTCAGCATG 2594 Query 54233 GGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATA 54292 |||| | |||||||| | ||||| || ||| | ||| || | || | || || || Sbjct 2595 GGAACTAGGCCATTGGAAGTGCCATTCGTGCCGCAAATAGAGGTGCCTTTTGCCCGGATG 2654 Query 54293 TTACTAATTGATAGACCTATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAAC 54352 | || || || || || |||||| ||| ||||| | ||||| ||| | | Sbjct 2655 CAATGAACATTCAGTCCAATGCCACCTGCCGATTTCGAGATCATGGCGCAGTGTTCCACC 2714 Query 54353 GTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATT 54412 | | | |||||||||| || ||| || ||||| | | || |||||| ||||| Sbjct 2715 GATTTAAAGATGCCCTCGATCGAGTCAGCCGTCATGGTCAAAAGGAAACAGGAAGACAGC 2774 Query 54413 TGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCA 54472 || | ||| | || | || ||| | || || || ||||| || || || ||| Sbjct 2775 TGCGGGCGATTTGTGGCAGCGGCAAAAAGCGTTGGCGATGCGTGGGTGAAGAATCGCTCA 2834 Query 54473 GAAAGTAGATTGTACGTCTCGATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCG 54532 || | || ||||| || || | || | || |||||| | ||| ||||||| ||| Sbjct 2835 GACAAAAGGTTGTAGGTTTCCACGGCCGCATCAATATCCTCTCCATGGATTCCTATTGCC 2894 Query 54533 ACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAGCAAGTAG 54592 || ||||| |||||||| || || | || ||||||| ||| | ||||||| || Sbjct 2895 ACGCGCATCAACATGTGTTGCGGACGCTCGGCGATCTTTCCATTTCTCTTCAGCAGATAA 2954 Query 54593 GATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATA 54652 || ||| | ||||| || |||||||||||||| ||| || || || ||||| ||| Sbjct 2955 GAACGTTCGAGGGTTTTGAATCCAAAATAGTTGTACCCAAAATCACGATCATAAATTATA 3014 >seq8501 Length=20033 Score = 401 bits (444), Expect = 7e-107 Identities = 1218/1867 (65%), Gaps = 36/1867 (2%) Strand=Plus/Minus Query 52808 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 52867 ||||| ||||| | | || || || || || || || ||||||||||| || || || Sbjct 2792 GTGAACTGAATTGCATTGGCGGCTGGCTTTGTGCGCAGGTAGTACATTCCGGTCTTAAGT 2733 Query 52868 CCGAGACTCCATCCGTAAAAATGCATACTTGTTAGTTTGGAATAACTCGGATCTGCTATA 52927 || |||| |||||| || || || | ||| ||| | || || || | | Sbjct 2732 CCAGCTTTCCAAGAGTAAAAGTGAATGGACGTCAATTTTCCATAGTTTGGCTCAGCCACA 2673 Query 52928 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 52987 || ||||| | || |||||||| || || || || || | || || |||||||| || Sbjct 2672 TGAATATTGAACGACTGACTTTGGTCTATAAACGCCCCACGATCAGCGGCCATTTTAATT 2613 Query 52988 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAAC-TCGCTTAATATCTTCTGGAAG 53046 | | ||| || |||||||| | |||||| |||| |||| | | ||| | | | Sbjct 2612 GTGGACTTCACTGAGATTTCCCACACAGTTTTGTAAAGATCGCGAACTTTCTGGGGAATG 2553 Query 53047 GTTTGTATTC--TGAATAGATCCACCATCTACCA-TAATCCTATTCTTGATCTCATCATT 53103 || | || | || || || || || || | | ||| ||||| || || |||| Sbjct 2552 GTCTCAATACCTTGGATGGAGCC-CCTGCTGGAAATGATCTGGTTCTTCATGTCGTCATC 2494 Query 53104 CCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCC 53163 ||| || | ||| ||||| | || | | ||| | || || || || ||||| || Sbjct 2493 CCACAAGTCGAGCTCAGTTAAGTCCCTCAACAAATGATGGTTGACCACCTGGAATTCACC 2434 Query 53164 AGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATTTCC 53223 ||||| |||| | || ||||| || ||||||| || || | ||| || || ||||| Sbjct 2433 AGACAGAACTCGTCTGGTATAAATGTTCGTGGTATAGGGCTCGAAAGATTCGTTGTTTCC 2374 Query 53224 CAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACC 53283 || |||||||||||| || ||||| |||||||| || || | | || | | ||| Sbjct 2373 CATAATTTGAGCAGTAGACGCAGTAGGCATAGGGGCAACAAGCAGGGAGTTCCGGACACC 2314 Query 53284 GTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACNNN 53343 || || |||| || ||||| || ||||| ||| || | || || Sbjct 2313 GTGCTTTTTGATGGACTCCTTTAGTTTTTGCCAATCCCACAGGTTCGTTGGCTGTTTGTC 2254 Query 53344 NNNNNNNNNNNNTTG-TAGAATACCGTTACT-----GGCGTACGATCCTACATATGTA-T 53396 || |||||| || || || ||| ||| ||| |||| ||| | Sbjct 2253 CCACATGTCGTACTGCTAGAATTCCTTTGCTCACGGGGCTTAC---CCT-CATAGGTACT 2198 Query 53397 CGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGG 53456 | || || ||||| || || |||||||| || || || | |||||||| ||||| | Sbjct 2197 CATAGGGACCTTCGACCTGCGCCAGTTCACAGCTGGCTTCCAGGGCACCGTAGTAAATCG 2138 Query 53457 TTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAATTTAAGA 53516 |||| || |||| || ||| | | ||||| || ||| |||| | | || Sbjct 2137 TTTCAAATATCTGCTGATTCAAAAGACCGGCTTCTTCACTTTCATATGGGAATCGCATGA 2078 Query 53517 GAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAG 53576 |||| || ||||| || || || |||||||| || || | || | ||||||| ||| | Sbjct 2077 GAATCAAGGCGTCAGCGAAACCCTGAACACCGATGCCCACGGGACGATGTCTCAAATTGG 2018 Query 53577 AGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGGTTTCTGA 53636 | | | || ||||| | |||||| | || ||||| || || || ||||| ||| || Sbjct 2017 ATTTCTTTGCCTCTGGGAGGGGATAAAAGTTGATATCAATTATCTTGTTGAGATTTTTGG 1958 Query 53637 CAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATTGTCCATC---TATTACAA 53693 || ||| || ||||| ||||| | |||||||||| | || | | |||| Sbjct 1957 TAACCGTCTTGGTAACTTCCTTAAGTTTCTGGAAATCAAATTTTTTCTCGGGTGTGACAA 1898 Query 53694 ACATGTTCAATGCAATAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATT 53753 ||||||| | || || |||||||| || || || || | ||||| | | ||||| Sbjct 1897 ACATGTTAAGAGCGATGGATGCCAGGTTGCACACTGCAATCTCATCCGGCGAGGAATATT 1838 Query 53754 GTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCT 53813 | || || ||||| | || || ||||| ||||| || | || || || || || | Sbjct 1837 CAACGATTTCTGTGCACAAGTTGCTGCACTTAATGGTGCCAACGTTCTGCTGGTTGCTTT 1778 Query 53814 TTTTGTTACACGCATCCTTATAAAGAATGAATGGCGTACCAGTTTCAATCTGGGATTCTA 53873 | |||| || |||||||| | || || | || | |||||||| | ||| || || | Sbjct 1777 TCCTGTTGCAGGCATCCTTGAAGAGCATATACGGGTTGCCAGTTTCCACCTGCGACTCAA 1718 Query 53874 TAATCGCTTTCCAGACGACACGAGCCTTTATTATA-GATTTGTATCTCTTTTCTCTT--T 53930 |||| || ||| | | ||||||| | | | || | | | ||||| | Sbjct 1717 TAATGGCAAACCACAAGGACTGAGCCTTGACCGTTCGGTTCGCACGACC---CTCTTGCT 1661 Query 53931 CGTAT--AGTGTATACAATCGTTCAAACTCGTCTCCCCAAACATTGTCCAATCCAGGACA 53988 ||||| |||||| | || || || || || ||||| |||| || || || || || Sbjct 1660 CGTATTTAGTGTACAGCTTC--TCGAATTCATCGCCCCAGACATCGTGCAGGCCCGGGCA 1603 Query 53989 TTCATCCGGACACATCAACGACCACTCTCCGTCAT---CCTTCACTCGTTTCATAAAGAG 54045 || | ||| ||||||| |||||| | || |||| ||| || |||||||| ||||| Sbjct 1602 TTTGTGCGGGCACATCAGCGACCAAT-TC--TCATTGGCCTCGACGCGTTTCATGAAGAG 1546 Query 54046 ATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATT 54105 ||| || |||||||| || ||| ||||| | || | || ||||| || || || || Sbjct 1545 ATCGGGTATCCAAAGGGCGTAAAACAGATCGCGGGCGCGATTCTCCTCCTTGCCAGTGTT 1486 Query 54106 CTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGTCAT 54165 ||| | || || || ||| | | | ||| || ||||| || |||| ||| |||| | Sbjct 1485 -TTTCTGAGTTCCAGAAACTCAAAGACATCCGAGTGCCAGGGCTCCAGGTAAATGGCAAA 1427 Query 54166 AACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCT 54225 | || || || ||| || |||||||| | || | || || || | || || Sbjct 1426 GGCACCGGGACGCTTGCCGCCACCCTGATCCACATAGCGTGCCACATTGTTGAAGACCCT 1367 Query 54226 CAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGC 54285 || ||| |||| | |||||||| | ||||| || ||| | ||| || | || | || Sbjct 1366 CAGCATGGGAACTAGGCCATTGGAAGTGCCATTCGTGCCGCAAATAGAGGTGCCTTTTGC 1307 Query 54286 ACGAATATTACTAATTGATAGACCTATCCCCCCTGCCATTTTAGAGATTAATGCGCATCG 54345 || || | || || || || || |||||| ||| ||||| | ||||| | Sbjct 1306 CCGGATGCAATGAACATTCAGTCCAATGCCACCTGCCGATTTCGAGATCATGGCGCAGTG 1247 Query 54346 TTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCT 54405 || | || | | |||||||||| || ||| || ||||| | | || |||||| Sbjct 1246 TTCCACCGATTTAAAGATGCCCTCGATCGAGTCAGCCGTCATGGTCAAAAGGAAACAGGA 1187 Query 54406 AGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCA 54465 ||||| || | ||| | || | || ||| | || || || ||||| || || | Sbjct 1186 AGACAGCTGCGGGCGATTTGTGGCAGCGGCAAAAAGCGTTGGCGATGCGTGGGTGAAGAA 1127 Query 54466 TTTTTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCTATATCCCATTGATGAATTCC 54525 | ||||| | || ||||| || || | || | || |||||| | ||| ||||| Sbjct 1126 TCGCTCAGACAAAAGGTTGTAGGTTTCCACGGCCGCATCAATATCCTCTCCATGGATTCC 1067 Query 54526 TACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAG 54585 || ||| || ||||| |||||||| || || | || ||||||| ||| | ||||| Sbjct 1066 TATTGCCACGCGCATCAACATGTGTTGCGGACGCTCGGCGATCTTTCCATTTCTCTTCAG 1007 Query 54586 CAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTA 54645 || || || ||| | ||||| || |||||||||||||| ||| || || || || Sbjct 1006 CAGATAAGAACGTTCGAGGGTTTTGAATCCAAAATAGTTGTACCCAAAATCACGATCATA 947 Query 54646 AATAATA 54652 ||| ||| Sbjct 946 AATTATA 940 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593552248335120