Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20rhopaloa_20[refseq_20GCF_5F000236305.1_202013-02-22] 22,819 sequences; 197,375,704 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq22136 508 6e-139 seq22266 143 3e-29 seq22190 134 1e-26 seq20501 127 2e-24 seq22228 122 9e-23 seq5502 122 9e-23 seq19000 84.2 2e-11 >seq22136 Length=515022 Score = 508 bits (562), Expect = 6e-139 Identities = 588/786 (75%), Gaps = 10/786 (1%) Strand=Plus/Minus Query 116655 AGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTGTCCAAGGACACGAGCGACT 116714 |||| ||||| || |||||||| || |||||||| ||||||||||||||| || ||||| Sbjct 290456 AGGCTGAGGCCTCTTTCTGGACTGTGGAGGAGGTTGACCTGTCCAAGGACTTGACCGACT 290397 Query 116715 GGGAGCGCTTGAACGACAACGAGCGCCATTTCATCAAGCACGTGCTGGCCTTTTTCGCCG 116774 || | || | || ||| | ||||| || |||||| ||||||||||||||| ||||||| Sbjct 290396 GGCATCGTCTCAAGGACGATGAGCGTCACTTCATCTCGCACGTGCTGGCCTTCTTCGCCG 290337 Query 116775 CCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGTTTCGCTCAGGAGGTGCAGGTGG 116834 || ||| ||||| || || ||||| || || ||||| ||| ||||||||||||| | Sbjct 290336 CCTCCGATGGCATTGTTAATGAGAACCTCGTGGAGCGCTTCAGTCAGGAGGTGCAGATCA 290277 Query 116835 CCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATGGAGAACGTGCACTCGGAAATGT 116894 | ||||| || ||||||||||| || ||||||||||||||||||||||||||||| |||| Sbjct 290276 CGGAGGCCCGCTGCTTCTACGGATTCCAGATCGCCATGGAGAACGTGCACTCGGAGATGT 290217 Query 116895 ATTCGACCCTCATCGACACGTACGTGCGCTCTTCGGAGGAGAAGCTCCGTTTGTTGAACG 116954 | || |||||||| ||| | || | || | || | | |||| |||| Sbjct 290216 ACAGCGTGCTGATCGACACTTACATCCGGGATCCGCACCAGCGAGACTATCTGTTCAACG 290157 Query 116955 CCATCGAGACGATGCCGTGCGTCAAAGAG-AAGGCCGAGTGGGCGCTGCGCTGGATCGCC 117013 |||||||||||||||| ||| ||| | ||||| || ||||| ||| ||||||| || Sbjct 290156 CCATCGAGACGATGCCA-GCGGTGAAGCGCAAGGCGGACTGGGCCCTGTCCTGGATCTCC 290098 Query 117014 GGCAGAGAGGCCGCC---TTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGAGGGCGTC 117070 || || ||||| ||||| |||||| | | ||||| || ||||| |||||| || Sbjct 290097 TCCA---AGTCCGCCAATTTCGGGGAGCGCATCATCGCCTTTGCCGCCGTGGAGGGCATC 290041 Query 117071 TTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGCCCGGC 117130 ||||| |||||||||||| |||| || ||||| ||||||||||| | ||||| ||| Sbjct 290040 TTCTTCAGCGGCAGTTTCGCCTCCATTTTCTGGCTAAAGAAACGCGGTTTGATGCCGGGC 289981 Query 117131 CTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTCTGCATTGCGACTTTGCCTGT 117190 ||||| ||| |||||| || |||||| |||||||||| |||| || ||||| ||| Sbjct 289980 CTGACCTTCTCCAACGAACTGATCTCCCGGGACGAGGGATTGCACTGTGACTTCGCCGTG 289921 Query 117191 TTGCTGTTCAAGCATTTGGTGCAGCGACCGAGCGCG-GCGCGCGTCAGGGAGATCGTCAC 117249 || ||||| ||||| |||| |||||||| || ||| | |||| ||| |||||| || Sbjct 289920 CTGATGTTCCAGCATCTGGTTCAGCGACCCAG-GCGCGAGCGCATCATCGAGATCATCCG 289862 Query 117250 CGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAAGCGCTGCCGGTGCGTCTGCTGGG 117309 || ||||| ||||| |||||| ||||||||||| || ||||| || || | || Sbjct 289861 TGATGCGGTGGCCATTGAGCAGGAGTTCCTCACCGATGCCCTGCCCGTAAACCTTATTGG 289802 Query 117310 ACTCAATTGCGAAACGATGTCGCAATACATCGAGTTCGTCGCCGACAGGCTGCTGCTCGA 117369 | || ||||| |||||||| ||||| |||||||| || ||| | ||||| | || Sbjct 289801 CATGAACTGCGACCTCATGTCGCAGTACATTGAGTTCGTGGCGGACCGTTTGCTGGTGGA 289742 Query 117370 GCTGGTCGGCGCCAAGCACTACAACACGCCCAACCCGCTGGACTTTATGAACCTCATCTC 117429 ||| || | ||| ||||||||| |||||| | |||| ||| | | ||||| Sbjct 289741 ATTGGGCGTTGGAAAGATCTACAACACCAAGAACCCGTTCAACTTCATGGAGATGATCTC 289682 Query 117430 CTTGGA 117435 | |||| Sbjct 289681 CCTGGA 289676 >seq22266 Length=384576 Score = 143 bits (158), Expect = 3e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| ||||| ||||| ||||| ||||||||| | || || || | | Sbjct 109383 ATGCAAATTTTCGTGAAAACCCTCACCGGCAAGACCATCACCTTGGAGGTGGAGCCTTCG 109324 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | | |||| || || | ||||| |||||||| ||| | || ||| Sbjct 109323 GACACCATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCAGATCAG 109264 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || || |||| ||| ||||| |||||||| || | |||||||| ||||||||| Sbjct 109263 CAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGCACCCTGTCGGACTACAAC 109204 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||||||||||| | || || ||||| ||| | ||| || | || || Sbjct 109203 ATCCAGAAGGAGTCGACCCTTCATCTGGTGCTCCGCCTGCGTGGTGG 109157 >seq22190 Length=927835 Score = 134 bits (148), Expect = 1e-26 Identities = 161/216 (75%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || ||||| ||||| ||||||||| | || ||||| || || Sbjct 837525 ATGCAGATCTTTGTCAAGACTCTCACTGGCAAGACCATCACCCTTGAGGTCGAGCCCTCC 837584 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | | | |||| | |||| ||||| | ||||| || ||||| ||| | ||||| Sbjct 837585 GATACCATTGAGAACG-TGAAGGCTAAAATCCAGGACAAGGAAGGCATTCCCCCAGACCA 837643 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || | |||| || ||||| ||| |||| |||| |||||| | ||||||||| Sbjct 837644 GCAGCGTTTGATCTTTGCTGGCAAGCAGTTGGAGGACGGACGCACCTTGTCCGACTACAA 837703 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 ||||||||||||| |||| ||||| | || |||| Sbjct 837704 CATCCAGAAGGAGTCCACTTTGCATTTGGTCCTGCG 837739 Score = 123 bits (136), Expect = 3e-23 Identities = 152/204 (75%), Gaps = 3/204 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || ||||| ||||| ||||||||| | || ||||| || || Sbjct 837298 ATGCAGATCTTTGTCAAGACTCTCACTGGCAAGACCATCACCTT-GAGGTCGAGCCCTCC 837356 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | | | |||| | |||| ||||| | ||||| || ||||| ||| | ||||| Sbjct 837357 GATACCATCGAGAACG-TGAAGGCTAAAATCCAGGACAAGGAAGGCATTCCCCCAGACCA 837415 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || | |||| || ||||| ||| |||| |||| |||||| | ||||||||| Sbjct 837416 GCAGCGTTTGATCTTTGCTGGCAAGCAGTTGGAGGACGGACGCACCTTGTCCGACTACAA 837475 Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892 ||||||||||||| | || || || Sbjct 837476 CATCCAGAAGGAGTCTACCCTCCA 837499 Score = 118 bits (130), Expect = 1e-21 Identities = 167/232 (72%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 || |||||||| || || || || | || ||||| |||||||| | || || || | Sbjct 837067 AACATGCAAATTTTTGTGAAGACTTTGACCGGCAAGACCATCACTTTGGAGGTTGAGCCT 837126 Query 40747 ACCGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805 |||| | | | | |||| | |||| || || | ||||| ||||| || ||| | || Sbjct 837127 TCCGATACCATTGAGAACG-TGAAGGCCAAGATCCAGGACAAGGAGGGAATTCCCCCAGA 837185 Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865 |||||| ||| | |||| ||| || ||||||||||| || | |||||| | |||||| Sbjct 837186 CCAGCAGCGATTGATCTTCGCCGGAAAACAGCTGGAAGATGGACGCACCTTGTCCGACTA 837245 Query 40866 CAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 |||||||||||||||| | || || || | ||| | ||| || | || ||| Sbjct 837246 CAACATCCAGAAGGAGTCTACCCTCCACTTGGTGCTCCGCCTGCGTGGTGGC 837297 >seq20501 Length=31302 Score = 127 bits (140), Expect = 2e-24 Identities = 159/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 || ||||| || ||||| || || ||||||||||| |||||||| | || |||||| | Sbjct 11346 AAGATGCAGATCTTCGTTAAGACCCTCACGGGCAAGACCATCACTCTTGAGGTCGAACCG 11287 Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806 | |||| | ||| |||| | || |||| |||||||| || || || | || Sbjct 11286 TCGGACACTATCGAAAATGTCAAAGCCAAGATTCAGGACAAAGAAGGAATTCCTCCAGAT 11227 Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866 ||||| || || |||| ||| ||||| |||||||| || | || |||||| ||||| Sbjct 11226 CAGCAGCGTCTGATCTTCGCTGGCAAGCAGCTGGAAGATGGCCGTACCCTCTCTGACTAT 11167 Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 ||||| ||||||||| |||| |||| | ||| |||| Sbjct 11166 AACATTCAGAAGGAGTCCACTTTGCACTTGGTGCTGCG 11129 >seq22228 Length=358660 Score = 122 bits (134), Expect = 9e-23 Identities = 254/375 (68%), Gaps = 5/375 (1%) Strand=Plus/Plus Query 139334 CCCGTGCGGATAAGCGGCTACGTGCTCGGCCTGCCGCGCGGCCTGCACGGCTTCCACGTG 139393 |||||| | | | |||| | ||| ||| ||| | || |||||||| ||||||||| Sbjct 287975 CCCGTGACGGTCACCGGCGAGGTGTGCGGTCTGGCCAAGGGTCTGCACGGATTCCACGTG 288034 Query 139394 CACGAGTTCGGCGACGCGAGCAACGGGTGCACGTCGGCCGGCGAGCACTTCAACCCCGCG 139453 ||||||||||| ||| | |||||| |||| ||| |||| ||||||||| || Sbjct 288035 CACGAGTTCGGTGACAACACCAACGGCTGCATGTCATCCGGGCCGCACTTCAATCCTTAC 288094 Query 139454 CGCCGGGACCACGGCGCGCCCGACGCCGAGATCAGGCACGTCGGCGACCTGGGCAACCTC 139513 || ||| |||||||| |||| || |||| | | ||| | ||||| ||||||||| | Sbjct 288095 GGCAAGGAGCACGGCGCCCCCGCCGACGAGGACCGCCACCTGGGCGATCTGGGCAACATT 288154 Query 139514 GAGTCGGCGGGCCGCGACGCGCTCACCGAGGTGAGCCTGACGGACGGCGTCG-TGTCCCT 139572 ||| | | ||| ||| | ||| |||| | | | || ||| || | | | || Sbjct 288155 GAGGCCACCGGC---GACTGCCCCACGAAGGTCACCATCACCGACT-CGAGGATCACGCT 288210 Query 139573 GTACGGTCCGCACAGCATCATCGGACGGAGTCTGGTCGTGCACACGGACAGGGACGATCT 139632 | ||| | |||||||||||||||| | |||| || ||| | || || ||||| Sbjct 288211 CTTCGGCGCCGACAGCATCATCGGACGCACCGTGGTGGTCCACGCCGATGCCGATGATCT 288270 Query 139633 GGGCCTCACCGACCATCCATTGAGCAAGACCACCGGCAACTCGGGCGGCCGGCTCGCGTG 139692 ||| || ||| |||||||| |||| |||||| | |||| || | | || Sbjct 288271 CGGCAAGGGCGGCCACGAGCTGAGCAAGTCCACGGGCAACGCTGGCGCTCGCATTGGATG 288330 Query 139693 CGGCATCATCGGGAT 139707 |||| |||| || || Sbjct 288331 CGGCGTCATTGGCAT 288345 >seq5502 Length=68615 Score = 122 bits (134), Expect = 9e-23 Identities = 151/204 (74%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| |||||||| || | || || ||||||||||| |||| || || |||| | Sbjct 6730 ATGCAAATCTTCGTAAAGACCTTGACCGGAAAAACCATCACTCTCGAAGTGGA-GCCATC 6672 Query 40750 -GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | ||| | |||| || |||| || || ||||| || ||| | || || Sbjct 6671 TGACACCATTGAAAATGTGAAGGCTAAGATTCAGGATAAGGAGGGAATTCCCCCAGATCA 6612 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || ||||| | ||| || || ||| |||| || | |||||||| ||||||||| Sbjct 6611 GCAGCGTCTCATTTTCGCTGGAAAGCAGTTGGAAGATGGCCGCACCCTTTCCGACTACAA 6552 Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892 |||||||||||| |||| || || Sbjct 6551 CATCCAGAAGGAATCCACCCTTCA 6528 Score = 118 bits (130), Expect = 1e-21 Identities = 150/204 (74%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| |||||||| || | || || |||||||||||| | || |||||| || | Sbjct 6046 ATGCAAATCTTCGTAAAGACCTTGACCGGAAAAACCATCACCTTGGAAGTCGAACCCTCT 5987 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | | | |||| | |||| || || | ||||| ||||| || ||| | || || Sbjct 5986 GATACCATTGAGAACG-TGAAGGCCAAGATCCAGGACAAGGAGGGAATTCCCCCAGATCA 5928 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || | |||| ||| ||||| ||| |||| || | ||||| || ||| || || Sbjct 5927 GCAGCGTTTGATCTTCGCCGGCAAGCAGTTGGAAGATGGACGCACTCTGTCCGATTATAA 5868 Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892 ||||||||||||| |||| |||| Sbjct 5867 CATCCAGAAGGAGTCCACTTTGCA 5844 Score = 118 bits (130), Expect = 1e-21 Identities = 148/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || |||||||| || || || ||||| ||||| || | || || || || || Sbjct 6502 ATGCAGATCTTCGTAAAGACCCTGACTGGCAAGACCATTACGCTGGAGGTTGAGCCCTCC 6443 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | ||| | |||| || || | ||||| ||||||||||| | || ||| Sbjct 6442 GACACCATTGAAAATGTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCACCAGATCAG 6383 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 ||||| ||||| | ||| || || || |||| || | |||||||| ||||||||| Sbjct 6382 CAACGTCTCATTTTCGCTGGAAAGCAATTGGAAGATGGCCGCACCCTTTCGGACTACAAC 6323 Query 40870 ATCCAGAAGGAGGCCACGCTGCA 40892 ||||||||||| |||| || || Sbjct 6322 ATCCAGAAGGAATCCACCCTTCA 6300 Score = 118 bits (130), Expect = 1e-21 Identities = 148/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| |||||||| || | || || || ||||||||| | || |||||| | | Sbjct 7186 ATGCAAATCTTCGTAAAGACCTTGACCGGAAAGACCATCACCTTGGAAGTCGAACCATCT 7127 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | ||| | |||| || |||| || || ||||| || ||| | || ||| Sbjct 7126 GACACCATTGAAAATGTGAAGGCTAAGATTCAGGATAAGGAGGGAATTCCCCCAGATCAG 7067 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || ||||| | ||| || || ||| |||| || | |||||||| ||||||||| Sbjct 7066 CAGCGTCTCATTTTCGCTGGAAAGCAGTTGGAAGATGGCCGCACCCTTTCGGACTACAAC 7007 Query 40870 ATCCAGAAGGAGGCCACGCTGCA 40892 ||||||||||| |||| || || Sbjct 7006 ATCCAGAAGGAATCCACCCTTCA 6984 Score = 113 bits (124), Expect = 5e-20 Identities = 149/204 (73%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCA-C 40748 |||||||| ||||| || || || || ||||||||||| ||| | || || || |||| | Sbjct 6274 ATGCAAATCTTCGTGAAGACCCTGACTGGCAAAACCATTACCCTTGAGGTGGA-GCCATC 6216 Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 ||||| | | | | |||| || || | ||||| ||||| || ||| | || || Sbjct 6215 CGACACGATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGTATTCCCCCAGATCA 6156 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || || |||| || ||||| ||||| || || | || ||||| ||||||||| Sbjct 6155 GCAGCGTCTGATCTTTGCCGGCAAGCAGCTTGAAGATGGACGAACCCTTTCCGACTACAA 6096 Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892 |||||||||||| |||| || || Sbjct 6095 CATCCAGAAGGAATCCACCCTTCA 6072 Score = 104 bits (114), Expect = 2e-17 Identities = 154/216 (71%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCA-C 40748 |||||||| ||||| || || || || ||||||||||| ||| | || ||||| |||| | Sbjct 6958 ATGCAAATCTTCGTGAAGACCCTGACTGGCAAAACCATTACCCTTGAGGTCGA-GCCATC 6900 Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 ||||| | | | | |||| || || | ||||| ||||| || ||| | || || Sbjct 6899 CGACACGATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGTATTCCCCCAGATCA 6840 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| ||| | |||| || ||||| || ||||| |||| || || | || ||||| Sbjct 6839 GCAGCGATTAATCTTTGCCGGCAAGCAACTGGAGGACGGACGTACGTTGTCTGATTACAA 6780 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 |||||| |||||| | || || || | || ||||| Sbjct 6779 CATCCAAAAGGAGTCGACCCTTCACTTGGTATTGCG 6744 Score = 96.9 bits (106), Expect = 4e-15 Identities = 145/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 |||||||| || || || || || | || ||||| ||||| || | || || || | Sbjct 7417 AAAATGCAGATCTTTGTGAAGACATTGACTGGCAAGACCATTACTTTGGAGGTGGAGCCT 7358 Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806 |||| | | | | | |||| || |||| || || |||||||| ||| | ||| Sbjct 7357 TCCGATACGATCGAGAATGTAAAGGCCAAGATTCAGGATAAGGAGGGCATTCCCCCAGAC 7298 Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866 ||||| || || |||| || ||||| ||||| || || | || ||||| ||||||| Sbjct 7297 CAGCAGCGTCTGATCTTTGCCGGCAAGCAGCTTGAAGATGGACGAACCCTTTCCGACTAC 7238 Query 40867 AACATCCAGAAGGAGGCCACGCTGCA 40892 |||||||||||||| |||| || || Sbjct 7237 AACATCCAGAAGGAATCCACCCTTCA 7212 >seq19000 Length=111808 Score = 84.2 bits (92), Expect = 2e-11 Identities = 82/106 (77%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 73583 CAACCACGCCGTGCTGCTGGTCGGCTACGGCGTCGAGAACGGAGTGCCCTACTGGGTGTT 73642 |||||||||| | ||| | || |||||||| |||||||| | ||||||| | | Sbjct 109445 CAACCACGCCATCCTGGTCGTGGGCTACGGATCGGAGAACGGCCAGGACTACTGGATCAT 109504 Query 73643 CAAGAACACGTGGGGCGACGACTGGGGCGAGAACGGCTATTTCCGC 73688 ||||||| | |||| |||| |||||||||||| ||||| |||||| Sbjct 109505 CAAGAACTCCTGGGACGACACCTGGGGCGAGAAGGGCTACTTCCGC 109550 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515072240163440