Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20rhopaloa_20[refseq_20GCF_5F000236305.1_202013-02-22]
22,819 sequences; 197,375,704 total letters
Query= NC_002188.1
Length=288539
Score E
Sequences producing significant alignments: (Bits) Value
seq22430 125 1e-23
>seq22430
Length=315411
Score = 125 bits (138), Expect = 1e-23
Identities = 202/288 (70%), Gaps = 2/288 (1%)
Strand=Plus/Plus
Query 189449 CTATGGAACGCGTCACAAATGCAGATGGTGAGAGAAGGAAAAATGCATAGTTTTTTACGA 189508
|| |||||| || ||||| ||||| ||||| | || || || ||||| | || |||||
Sbjct 156959 CTGTGGAACTCGGCACAATTGCAGCTGGTGCGCGAGGGTAAGATGCACGGCTTCTTACGC 157018
Query 189509 ATGTATTGGGCTAAGAAGATACTTGAATGGACTAGAACACCTGAAGACGCTTTGAGTTAT 189568
||||||||||| || ||||| || |||||||| || || ||| | || ||| |||
Sbjct 157019 ATGTATTGGGCCAAAAAGATTCTCGAATGGACCGCCACCCCGGAACAGGCGTTGGAGTAT 157078
Query 189569 AGTATCTATTTGAACAACAAGTACGAACTAGACGGCACG-GATCCTAACGGATACGTAGG 189627
||| ||||| ||||||| || || || ||| ||||| ||||| || || ||
Sbjct 157079 GCGATCCTACTGAACGACAAGTATAGCCTCGATGG-ACGCGATCCCAACGGCTATGTGGG 157137
Query 189628 TTGTATGTGGTCTATTTGCGGATTACACGATAGAGCGTGGAAAGAAAGACCGATATTTGG 189687
||||||||||| || |||| | || |||| | ||||| ||| | | || || ||
Sbjct 157138 CTGTATGTGGTCCATCGGCGGTGTCCATGATATGGGATGGAAGGAACGCGCCATTTTCGG 157197
Query 189688 AAAGATAAGATATATGAATTATGAGAGTTCTAAGAAGAAATTTGATGT 189735
|||| | | || ||||| ||| || | | | |||||||||||
Sbjct 157198 AAAGGTTCGGTACATGAACTATCAGGGCTGCCGGCGCAAATTTGATGT 157245
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 922933469652760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |