Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20rhopaloa_20[refseq_20GCF_5F000236305.1_202013-02-22]
22,819 sequences; 197,375,704 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq8502 401 8e-107
seq1813 401 8e-107
seq8501 398 1e-105
seq22136 152 6e-32
>seq8502
Length=4749
Score = 401 bits (444), Expect = 8e-107
Identities = 1223/1878 (65%), Gaps = 43/1878 (2%)
Strand=Plus/Plus
Query 62046 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 62105
||||| ||||| | | || || || || || || || ||||||||||| || || ||
Sbjct 1164 GTGAACTGAATTGCATTGGCGGCTGGCTTTGTGCGCAGGTAGTACATTCCGGTCTTAAGT 1223
Query 62106 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 62165
|| |||| |||||| || || ||| | ||| ||| | || || || | |
Sbjct 1224 CCAGCTTTCCAAGAGTAAAAGTGAATGGACGTCAATTTTCCATAGTTTGGCTCAGCCACA 1283
Query 62166 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 62225
|| ||||| | || |||||||| || || || || || | || || |||||||| ||
Sbjct 1284 TGAATATTGAACGACTGACTTTGGTCTATAAACGCCCCACGATCAGCGGCCATTTTAATT 1343
Query 62226 ATCGTCTTTTGTGCAATTTCCCAAATAGTTTTATAAAC-TCGCTTAATATCTTCTGGAAG 62284
| | ||| || |||||||| | |||||| |||| |||| | | ||| | | |
Sbjct 1344 GTGGACTTCACTGAGATTTCCCACACAGTTTTGTAAAGATCGCGAACTTTCTGGGGAATG 1403
Query 62285 GTTTGTATTC--TGAATGGATCCACCATCTACCA-TAATCCTATTCTTGATCTCATCATT 62341
|| | || | || ||||| || || || | | ||| ||||| || || ||||
Sbjct 1404 GTCTCAATACCTTGGATGGAGCC-CCTGCTGGAAATGATCTGGTTCTTCATGTCGTCATC 1462
Query 62342 CCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGGTTAACTACTTGGAATTCTCC 62401
||| || | ||| ||||| | || | | ||| |||| || || |||||||| ||
Sbjct 1463 CCACAAGTCGAGCTCAGTTAAGTCCCTCAACAAATGATGGTTGACCACCTGGAATTCACC 1522
Query 62402 AGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATTATTTCC 62461
||||| |||| | || ||||| || ||||||| || || | || || || |||||
Sbjct 1523 AGACAGAACTCGTCTGGTATAAATGTTCGTGGTATAGGGCTCGAAAGATTCGTTGTTTCC 1582
Query 62462 CAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACC 62521
|| |||||||||||| || ||||| |||||||| || || | | || | | |||
Sbjct 1583 CATAATTTGAGCAGTAGACGCAGTAGGCATAGGGGCAACAAGCAGGGAGTTCCGGACACC 1642
Query 62522 GTATGTTCTGATTTTATCTTTTAGATGTTCCCAATTCCAAAGATCCGACGG-------TA 62574
|| || |||| || ||||| | || ||||| ||| || | || || |
Sbjct 1643 GTGCTTTTTGATGGACTCCTTTAGTTTTTGCCAATCCCACAGGTTCGTTGGCTGTTTGTC 1702
Query 62575 CAACANNNNNNNNNNNATATTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTAT 62634
| ||| || || ||||| || || || || ||| |||| || |
Sbjct 1703 CCACATGTCG-------TACTGCAGAATTCCTTTGCTCACGGGGCTTCCCTCATAGGTCT 1755
Query 62635 CATATGGTCCTTCCTTCTCAGCTAGTTTACAACTCGCCTCTAATGCACCGTAATAAATGG 62694
|||| || ||||| || || |||| ||| || || || | |||||||| ||||| |
Sbjct 1756 CATAGGGACCTTCGACCTGCGCCAGTTCACAGCTGGCTTCCAGGGCACCGTAGTAAATCG 1815
Query 62695 TTTCAAAGATCTTCTTATTTA----GATCTTGTGCTTCCGGGCTATCAAATGGATAATTT 62750
||||||| |||| || ||| | || | | |||| || ||| |||| |
Sbjct 1816 TTTCAAATATCTGCTGATTCAAAAAGACCGGCTTCTTCA---CTTTCATATGGGAATCGC 1872
Query 62751 AAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTA 62810
| |||||| || ||||| || || || |||||||| || || | || | ||||||| |
Sbjct 1873 ATGAGAATCAAGGCGTCAGCGAAACCCTGAACACCGATGCCCACGGGACGATGTCTCAAA 1932
Query 62811 TTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTT 62870
|| || | | || ||||| | |||||| | || ||||| || || || |||||||||
Sbjct 1933 TTGGATTTCTTTGCCTCTGGGAGGGGATAAAAGTTGATATCAATTATCTTGTTGAGATTT 1992
Query 62871 CTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGCCCATC---TATT 62927
|| || ||| || ||||| ||||| | ||||||||| || | |
Sbjct 1993 TTGGTAACCGTCTTGGTAACTTCCTTAAGTTTCTGGAAATCAAATTTTTTCTCGGGTGTG 2052
Query 62928 ACAAACATGTTCAATGCAACAGATGCCAGATTACACACGGCTACCTCATTAGCATCCGCA 62987
||||||||||| | || | |||||||| || ||||| || | ||||| | | |
Sbjct 2053 ACAAACATGTTAAGAGCGATGGATGCCAGGTTGCACACTGCAATCTCATCCGGCGAGGAA 2112
Query 62988 TATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTA 63047
|||| | || || ||||| | || || ||||| || || || | || || || ||
Sbjct 2113 TATTCAACGATTTCTGTGCACAAGTTGCTGCACTTAATGGTGCCAACGTTCTGCTGGTTG 2172
Query 63048 CTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGAT 63107
|| || |||| || |||||||| | || || | || | |||||||| | ||| ||
Sbjct 2173 CTTTTCCTGTTGCAGGCATCCTTGAAGAGCATATACGGGTTGCCAGTTTCCACCTGCGAC 2232
Query 63108 TCTATAATCGCTTTCCAGACG-ACTCGAGCCTTTATTATA-GATTTGTATCTCCTTTCTC 63165
|| ||||| || ||| | | ||| ||||||| | | | || | | || |||
Sbjct 2233 TCAATAATGGCAAACCACAAGGACT-GAGCCTTGACCGTTCGGTTCGCACGACC---CTC 2288
Query 63166 TT--TCGTATAGAGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCTAGG 63223
|| |||||| ||| |||| ||||| || || ||||| |||| || || | ||
Sbjct 2289 TTGCTCGTATTTAGTGTACAGCTTCTCGAATTCATCGCCCCAGACATCGTGCAGGCCCGG 2348
Query 63224 ACATTCATCCGGACACATCAACGACCACTCTCCGTCAT---CCTTCACTCGTTTCATAAA 63280
|||| | ||| ||||||| |||||| | || |||| ||| || |||||||| ||
Sbjct 2349 GCATTTGTGCGGGCACATCAGCGACCAAT-TC--TCATTGGCCTCGACGCGTTTCATGAA 2405
Query 63281 GAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGT 63340
|||||| || |||||||| || ||| ||||| | | | || ||||| || || ||
Sbjct 2406 GAGATCGGGTATCCAAAGGGCGTAAAACAGATCGCGGGCGCGATTCTCCTCCTTGCCAGT 2465
Query 63341 ATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGC 63400
|| || || || || || ||| | | | ||| || ||||| || |||| ||| |||||
Sbjct 2466 GTTTTTCTTGAGTTCCAGAAACTCAAAGACATCCGAGTGCCAGGGCTCCAGGTAAATGGC 2525
Query 63401 CATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAAC 63460
| | || || || ||| || |||||||| | || | || || || | ||
Sbjct 2526 AAAGGCACCGGGACGCTTGCCGCCACCCTGATCCACATAGCGTGCCACATTGTTGAAGAC 2585
Query 63461 TCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCCTCCACT 63520
|||| ||| |||| | || || || | ||||| || ||| | ||| || || |
Sbjct 2586 CCTCAGCATGGGAACTAGGCCATTGGAAGTGCCATTCGTGCCGCAAATAGAGGTGCCTTT 2645
Query 63521 GGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCA 63580
|| || || | || || || || || |||||| ||| ||||| | |||||
Sbjct 2646 TGCCCGGATGCAATGAACATTCAGTCCAATGCCACCTGCCGATTTCGAGATCATGGCGCA 2705
Query 63581 TCGTTTTAACGTGTCATAGATGCCTTCTATGCTATCATCGATCATGTTAAGTAGAAAACA 63640
||| | || | | ||||||| || || ||| | ||||| | | || |||||
Sbjct 2706 GTGTTCCACCGATTTAAAGATGCCCTCGATCGAGTCAGCCGTCATGGTCAAAAGGAAACA 2765
Query 63641 GCTAGACATTTGGTGACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAA 63700
| ||||| || | ||| | || | || ||| | || || || ||||| || ||
Sbjct 2766 GGAAGACAGCTGCGGGCGATTTGTGGCAGCGGCAAAAAGCGTTGGCGATGCGTGGGTGAA 2825
Query 63701 CCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAAT 63760
|| ||||| | || ||||| || || | || | || |||||| | ||| ||
Sbjct 2826 GAATCGCTCAGACAAAAGGTTGTAGGTTTCCACGGCCGCATCAATATCCTCTCCATGGAT 2885
Query 63761 TCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTT 63820
||||| ||| || ||||| |||||||| || || | || | || || ||| | ||
Sbjct 2886 TCCTATTGCCACGCGCATCAACATGTGTTGCGGACGCTCGGCGATCTTTCCATTTCTCTT 2945
Query 63821 CAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTC 63880
|| || || || ||| | ||||| || |||||||||||||| ||| || || ||
Sbjct 2946 CAGCAGATAAGAACGTTCGAGGGTTTTGAATCCAAAATAGTTGTACCCAAAATCACGATC 3005
Query 63881 GTAAATAATAACCGAATT 63898
||||| ||| |||||
Sbjct 3006 ATAAATTATAGAGGAATT 3023
>seq1813
Length=4749
Score = 401 bits (444), Expect = 8e-107
Identities = 1220/1874 (65%), Gaps = 36/1874 (2%)
Strand=Plus/Plus
Query 62046 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 62105
||||| ||||| | | || || || || || || || ||||||||||| || || ||
Sbjct 1164 GTGAACTGAATTGCATTGGCGGCTGGCTTTGTGCGCAGGTAGTACATTCCGGTCTTAAGT 1223
Query 62106 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 62165
|| |||| |||||| || || ||| | ||| ||| | || || || | |
Sbjct 1224 CCAGCTTTCCAAGAGTAAAAGTGAATGGACGTCAATTTTCCATAGTTTGGCTCAGCCACA 1283
Query 62166 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 62225
|| ||||| | || |||||||| || || || || || | || || |||||||| ||
Sbjct 1284 TGAATATTGAACGACTGACTTTGGTCTATAAACGCCCCACGATCAGCGGCCATTTTAATT 1343
Query 62226 ATCGTCTTTTGTGCAATTTCCCAAATAGTTTTATAAAC-TCGCTTAATATCTTCTGGAAG 62284
| | ||| || |||||||| | |||||| |||| |||| | | ||| | | |
Sbjct 1344 GTGGACTTCACTGAGATTTCCCACACAGTTTTGTAAAGATCGCGAACTTTCTGGGGAATG 1403
Query 62285 GTTTGTATTC--TGAATGGATCCACCATCTACCA-TAATCCTATTCTTGATCTCATCATT 62341
|| | || | || ||||| || || || | | ||| ||||| || || ||||
Sbjct 1404 GTCTCAATACCTTGGATGGAGCC-CCTGCTGGAAATGATCTGGTTCTTCATGTCGTCATC 1462
Query 62342 CCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGGTTAACTACTTGGAATTCTCC 62401
||| || | ||| ||||| | || | | ||| |||| || || |||||||| ||
Sbjct 1463 CCACAAGTCGAGCTCAGTTAAGTCCCTCAACAAATGATGGTTGACCACCTGGAATTCACC 1522
Query 62402 AGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATTATTTCC 62461
||||| |||| | || ||||| || ||||||| || || | || || || |||||
Sbjct 1523 AGACAGAACTCGTCTGGTATAAATGTTCGTGGTATAGGGCTCGAAAGATTCGTTGTTTCC 1582
Query 62462 CAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACC 62521
|| |||||||||||| || ||||| |||||||| || || | | || | | |||
Sbjct 1583 CATAATTTGAGCAGTAGACGCAGTAGGCATAGGGGCAACAAGCAGGGAGTTCCGGACACC 1642
Query 62522 GTATGTTCTGATTTTATCTTTTAGATGTTCCCAATTCCAAAGATCCGACGG-------TA 62574
|| || |||| || ||||| | || ||||| ||| || | || || |
Sbjct 1643 GTGCTTTTTGATGGACTCCTTTAGTTTTTGCCAATCCCACAGGTTCGTTGGCTGTTTGTC 1702
Query 62575 CAACANNNNNNNNNNNATATTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTAT 62634
| ||| || || ||||| || || || || ||| |||| || |
Sbjct 1703 CCACATGTCG-------TACTGCAGAATTCCTTTGCTCACGGGGCTTCCCTCATAGGTCT 1755
Query 62635 CATATGGTCCTTCCTTCTCAGCTAGTTTACAACTCGCCTCTAATGCACCGTAATAAATGG 62694
|||| || ||||| || || |||| ||| || || || | |||||||| ||||| |
Sbjct 1756 CATAGGGACCTTCGACCTGCGCCAGTTCACAGCTGGCTTCCAGGGCACCGTAGTAAATCG 1815
Query 62695 TTTCAAAGATCTTCTTATTTAGATCTTGTGCTTCCGGGCTATCAAATGGATAATTTAAGA 62754
||||||| |||| || ||| | | || || || ||| |||| | | ||
Sbjct 1816 TTTCAAATATCTGCTGATTCAAAAGACCGGCCTCTTCACTTTCATATGGGAATCGCATGA 1875
Query 62755 GAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAG 62814
|||| || ||||| || || || |||||||| || || | || | ||||||| ||| |
Sbjct 1876 GAATCAAGGCGTCAGCGAAACCCTGAACACCGATGCCCACGGGACGATGTCTCAAATTGG 1935
Query 62815 AGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGA 62874
| | | || ||||| | |||||| | || ||||| || || || ||||||||| ||
Sbjct 1936 ATTTCTTTGCCTCTGGGAGGGGATAAAAGTTGATATCAATTATCTTGTTGAGATTTTTGG 1995
Query 62875 CAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGCCCATC---TATTACAA 62931
|| ||| || ||||| ||||| | ||||||||| || | | ||||
Sbjct 1996 TAACCGTCTTGGTAACTTCCTTAAGTTTCTGGAAATCAAATTTTTTCTCGGGTGTGACAA 2055
Query 62932 ACATGTTCAATGCAACAGATGCCAGATTACACACGGCTACCTCATTAGCATCCGCATATT 62991
||||||| | || | |||||||| || ||||| || | ||||| | | |||||
Sbjct 2056 ACATGTTAAGAGCGATGGATGCCAGGTTGCACACTGCAATCTCATCCGGCGAGGAATATT 2115
Query 62992 GTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCT 63051
| || || ||||| | || || ||||| || || || | || || || || || |
Sbjct 2116 CAACGATTTCTGTGCACAAGTTGCTGCACTTAATGGTGCCAACGTTCTGCTGGTTGCTTT 2175
Query 63052 TTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTA 63111
| |||| || |||||||| | || || | || | |||||||| | ||| || || |
Sbjct 2176 TCCTGTTGCAGGCATCCTTGAAGAGCATATACGGGTTGCCAGTTTCCACCTGCGACTCAA 2235
Query 63112 TAATCGCTTTCCAGACG-ACTCGAGCCTTTATTATA-GATTTGTATCTCCTTTCTCTT-- 63167
|||| || ||| | | ||| ||||||| | | | || | | || |||||
Sbjct 2236 TAATGGCAAACCACAAGGACT-GAGCCTTGACCGTTCGGTTCGCACGACC---CTCTTGC 2291
Query 63168 TCGTATAGAGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCTAGGACAT 63227
|||||| ||| |||| ||||| || || ||||| |||| || || | || |||
Sbjct 2292 TCGTATTTAGTGTACAGCTTCTCGAATTCATCGCCCCAGACATCGTGCAGGCCCGGGCAT 2351
Query 63228 TCATCCGGACACATCAACGACCACTCTCCGTCAT---CCTTCACTCGTTTCATAAAGAGA 63284
| | ||| ||||||| |||||| | || |||| ||| || |||||||| ||||||
Sbjct 2352 TTGTGCGGGCACATCAGCGACCAAT-TC--TCATTGGCCTCGACGCGTTTCATGAAGAGA 2408
Query 63285 TCAGGAATCCAAAGAGCTATAAATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTC 63344
|| || |||||||| || ||| ||||| | | | || ||||| || || || ||
Sbjct 2409 TCGGGTATCCAAAGGGCGTAAAACAGATCGCGGGCGCGATTCTCCTCCTTGCCAGTGTTT 2468
Query 63345 TTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATA 63404
|| || || || || ||| | | | ||| || ||||| || |||| ||| ||||| |
Sbjct 2469 TTCTTGAGTTCCAGAAACTCAAAGACATCCGAGTGCCAGGGCTCCAGGTAAATGGCAAAG 2528
Query 63405 ACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTC 63464
| || || || ||| || |||||||| | || | || || || | || |||
Sbjct 2529 GCACCGGGACGCTTGCCGCCACCCTGATCCACATAGCGTGCCACATTGTTGAAGACCCTC 2588
Query 63465 AACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCCTCCACTGGCA 63524
| ||| |||| | || || || | ||||| || ||| | ||| || || | ||
Sbjct 2589 AGCATGGGAACTAGGCCATTGGAAGTGCCATTCGTGCCGCAAATAGAGGTGCCTTTTGCC 2648
Query 63525 CGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGT 63584
|| || | || || || || || |||||| ||| ||||| | ||||| ||
Sbjct 2649 CGGATGCAATGAACATTCAGTCCAATGCCACCTGCCGATTTCGAGATCATGGCGCAGTGT 2708
Query 63585 TTTAACGTGTCATAGATGCCTTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTA 63644
| | || | | ||||||| || || ||| | ||||| | | || |||||| |
Sbjct 2709 TCCACCGATTTAAAGATGCCCTCGATCGAGTCAGCCGTCATGGTCAAAAGGAAACAGGAA 2768
Query 63645 GACATTTGGTGACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCAT 63704
|||| || | ||| | || | || ||| | || || || ||||| || || ||
Sbjct 2769 GACAGCTGCGGGCGATTTGTGGCAGCGGCAAAAAGCGTTGGCGATGCGTGGGTGAAGAAT 2828
Query 63705 TTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCT 63764
||||| | || ||||| || || | || | || |||||| | ||| ||||||
Sbjct 2829 CGCTCAGACAAAAGGTTGTAGGTTTCCACGGCCGCATCAATATCCTCTCCATGGATTCCT 2888
Query 63765 ACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAAC 63824
| ||| || ||||| |||||||| || || | || | || || ||| | |||| |
Sbjct 2889 ATTGCCACGCGCATCAACATGTGTTGCGGACGCTCGGCGATCTTTCCATTTCTCTTCAGC 2948
Query 63825 AAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAA 63884
| || || ||| | ||||| || |||||||||||||| ||| || || || |||
Sbjct 2949 AGATAAGAACGTTCGAGGGTTTTGAATCCAAAATAGTTGTACCCAAAATCACGATCATAA 3008
Query 63885 ATAATAACCGAATT 63898
|| ||| |||||
Sbjct 3009 ATTATAGAGGAATT 3022
>seq8501
Length=20033
Score = 398 bits (440), Expect = 1e-105
Identities = 1227/1881 (65%), Gaps = 48/1881 (3%)
Strand=Plus/Minus
Query 62046 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 62105
||||| ||||| | | || || || || || || || ||||||||||| || || ||
Sbjct 2792 GTGAACTGAATTGCATTGGCGGCTGGCTTTGTGCGCAGGTAGTACATTCCGGTCTTAAGT 2733
Query 62106 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 62165
|| |||| |||||| || || ||| | ||| ||| | || || || | |
Sbjct 2732 CCAGCTTTCCAAGAGTAAAAGTGAATGGACGTCAATTTTCCATAGTTTGGCTCAGCCACA 2673
Query 62166 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 62225
|| ||||| | || |||||||| || || || || || | || || |||||||| ||
Sbjct 2672 TGAATATTGAACGACTGACTTTGGTCTATAAACGCCCCACGATCAGCGGCCATTTTAATT 2613
Query 62226 ATCGTCTTTTGTGCAATTTCCCAAATAGTTTTATAAAC-TCGCTTAATATCTTCTGGAAG 62284
| | ||| || |||||||| | |||||| |||| |||| | | ||| | | |
Sbjct 2612 GTGGACTTCACTGAGATTTCCCACACAGTTTTGTAAAGATCGCGAACTTTCTGGGGAATG 2553
Query 62285 GTTTGTATTC--TGAATGGATCCACCATCTACCA-TAATCCTATTCTTGATCTCATCATT 62341
|| | || | || ||||| || || || | | ||| ||||| || || ||||
Sbjct 2552 GTCTCAATACCTTGGATGGAGCC-CCTGCTGGAAATGATCTGGTTCTTCATGTCGTCATC 2494
Query 62342 CCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGGTTAACTACTTGGAATTCTCC 62401
||| || | ||| ||||| | || | | ||| |||| || || |||||||| ||
Sbjct 2493 CCACAAGTCGAGCTCAGTTAAGTCCCTCAACAAATGATGGTTGACCACCTGGAATTCACC 2434
Query 62402 AGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATTATTTCC 62461
||||| |||| | || ||||| || ||||||| || || | || || || |||||
Sbjct 2433 AGACAGAACTCGTCTGGTATAAATGTTCGTGGTATAGGGCTCGAAAGATTCGTTGTTTCC 2374
Query 62462 CAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACC 62521
|| |||||||||||| || ||||| |||||||| || || | | || | | |||
Sbjct 2373 CATAATTTGAGCAGTAGACGCAGTAGGCATAGGGGCAACAAGCAGGGAGTTCCGGACACC 2314
Query 62522 GTATGTTCTGATTTTATCTTTTAGATGTTCCCAATTCCAAAGATCCGACGG-------TA 62574
|| || |||| || ||||| | || ||||| ||| || | || || |
Sbjct 2313 GTGCTTTTTGATGGACTCCTTTAGTTTTTGCCAATCCCACAGGTTCGTTGGCTGTTTGTC 2254
Query 62575 CAACANNNNNNNNNNNATATTG-TAGAATACCGTTACT-----GGCGTACGATCCTACAT 62628
| ||| || || |||||| || || || ||| ||| ||| |||
Sbjct 2253 CCACATGTCG-------TACTGCTAGAATTCCTTTGCTCACGGGGCTTAC---CCT-CAT 2205
Query 62629 ATGTA-TCATATGGTCCTTCCTTCTCAGCTAGTTTACAACTCGCCTCTAATGCACCGTAA 62687
| ||| ||||| || ||||| || || |||| ||| || || || | ||||||||
Sbjct 2204 AGGTACTCATAGGGACCTTCGACCTGCGCCAGTTCACAGCTGGCTTCCAGGGCACCGTAG 2145
Query 62688 TAAATGGTTTCAAAGATCTTCTTATTTAGATCTTGTGCTTCCGGGCTATCAAATGGATAA 62747
||||| |||||||| |||| || ||| | | ||||| || ||| |||| |
Sbjct 2144 TAAATCGTTTCAAATATCTGCTGATTCAAAAGACCGGCTTCTTCACTTTCATATGGGAAT 2085
Query 62748 TTTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTC 62807
| |||||| || ||||| || || || |||||||| || || | || | |||||||
Sbjct 2084 CGCATGAGAATCAAGGCGTCAGCGAAACCCTGAACACCGATGCCCACGGGACGATGTCTC 2025
Query 62808 TTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGA 62867
||| || | | || ||||| | |||||| | || ||||| || || || ||||||
Sbjct 2024 AAATTGGATTTCTTTGCCTCTGGGAGGGGATAAAAGTTGATATCAATTATCTTGTTGAGA 1965
Query 62868 TTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGCCCATC---T 62924
||| || || ||| || ||||| ||||| | ||||||||| || |
Sbjct 1964 TTTTTGGTAACCGTCTTGGTAACTTCCTTAAGTTTCTGGAAATCAAATTTTTTCTCGGGT 1905
Query 62925 ATTACAAACATGTTCAATGCAACAGATGCCAGATTACACACGGCTACCTCATTAGCATCC 62984
| ||||||||||| | || | |||||||| || ||||| || | ||||| |
Sbjct 1904 GTGACAAACATGTTAAGAGCGATGGATGCCAGGTTGCACACTGCAATCTCATCCGGCGAG 1845
Query 62985 GCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGA 63044
| ||||| | || || ||||| | || || ||||| || || || | || || ||
Sbjct 1844 GAATATTCAACGATTTCTGTGCACAAGTTGCTGCACTTAATGGTGCCAACGTTCTGCTGG 1785
Query 63045 TTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGA 63104
|| || || |||| || |||||||| | || || | || | |||||||| | |||
Sbjct 1784 TTGCTTTTCCTGTTGCAGGCATCCTTGAAGAGCATATACGGGTTGCCAGTTTCCACCTGC 1725
Query 63105 GATTCTATAATCGCTTTCCAGACG-ACTCGAGCCTTTATTATA-GATTTGTATCTCCTTT 63162
|| || ||||| || ||| | | ||| ||||||| | | | || | | ||
Sbjct 1724 GACTCAATAATGGCAAACCACAAGGACT-GAGCCTTGACCGTTCGGTTCGCACGACC--- 1669
Query 63163 CTCTT--TCGTATAGAGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCT 63220
||||| |||||| ||| |||| ||||| || || ||||| |||| || || |
Sbjct 1668 CTCTTGCTCGTATTTAGTGTACAGCTTCTCGAATTCATCGCCCCAGACATCGTGCAGGCC 1609
Query 63221 AGGACATTCATCCGGACACATCAACGACCACTCTCCGTCAT---CCTTCACTCGTTTCAT 63277
|| |||| | ||| ||||||| |||||| | || |||| ||| || ||||||||
Sbjct 1608 CGGGCATTTGTGCGGGCACATCAGCGACCAAT-TC--TCATTGGCCTCGACGCGTTTCAT 1552
Query 63278 AAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTTGTTCTATGTTCCTCGTTTCC 63337
|||||||| || |||||||| || ||| ||||| | | | || ||||| || ||
Sbjct 1551 GAAGAGATCGGGTATCCAAAGGGCGTAAAACAGATCGCGGGCGCGATTCTCCTCCTTGCC 1492
Query 63338 TGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATAT 63397
|| || ||| | || || || ||| | | | ||| || ||||| || |||| ||| ||
Sbjct 1491 AGTGTT-TTTCTGAGTTCCAGAAACTCAAAGACATCCGAGTGCCAGGGCTCCAGGTAAAT 1433
Query 63398 GGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATA 63457
||| | | || || || ||| || |||||||| | || | || || || |
Sbjct 1432 GGCAAAGGCACCGGGACGCTTGCCGCCACCCTGATCCACATAGCGTGCCACATTGTTGAA 1373
Query 63458 AACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCCTCC 63517
|| |||| ||| |||| | || || || | ||||| || ||| | ||| || ||
Sbjct 1372 GACCCTCAGCATGGGAACTAGGCCATTGGAAGTGCCATTCGTGCCGCAAATAGAGGTGCC 1313
Query 63518 ACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGC 63577
| || || || | || || || || || |||||| ||| ||||| | ||
Sbjct 1312 TTTTGCCCGGATGCAATGAACATTCAGTCCAATGCCACCTGCCGATTTCGAGATCATGGC 1253
Query 63578 GCATCGTTTTAACGTGTCATAGATGCCTTCTATGCTATCATCGATCATGTTAAGTAGAAA 63637
||| ||| | || | | ||||||| || || ||| | ||||| | | || ||
Sbjct 1252 GCAGTGTTCCACCGATTTAAAGATGCCCTCGATCGAGTCAGCCGTCATGGTCAAAAGGAA 1193
Query 63638 ACAGCTAGACATTTGGTGACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGT 63697
|||| ||||| || | ||| | || | || ||| | || || || ||||| ||
Sbjct 1192 ACAGGAAGACAGCTGCGGGCGATTTGTGGCAGCGGCAAAAAGCGTTGGCGATGCGTGGGT 1133
Query 63698 AAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATG 63757
|| || ||||| | || ||||| || || | || | || |||||| | |||
Sbjct 1132 GAAGAATCGCTCAGACAAAAGGTTGTAGGTTTCCACGGCCGCATCAATATCCTCTCCATG 1073
Query 63758 AATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTAT 63817
||||||| ||| || ||||| |||||||| || || | || | || || ||| |
Sbjct 1072 GATTCCTATTGCCACGCGCATCAACATGTGTTGCGGACGCTCGGCGATCTTTCCATTTCT 1013
Query 63818 TTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCG 63877
|||| || || || ||| | ||||| || |||||||||||||| ||| || ||
Sbjct 1012 CTTCAGCAGATAAGAACGTTCGAGGGTTTTGAATCCAAAATAGTTGTACCCAAAATCACG 953
Query 63878 TTCGTAAATAATAACCGAATT 63898
|| ||||| ||| |||||
Sbjct 952 ATCATAAATTATAGAGGAATT 932
>seq22136
Length=515022
Score = 152 bits (168), Expect = 6e-32
Identities = 466/718 (65%), Gaps = 3/718 (0%)
Strand=Plus/Plus
Query 33294 TGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTTCC 33353
||||| || ||||| || ||||| || || || || || |||| || || | |||
Sbjct 289634 TGGTACTCGCCCACCTTCTTCTCGAAGAAGTTGGTCTTGCCGTCCAGGGAGATCATCTCC 289693
Query 33354 ATGAAATCAAACGGATTGGTAACATTGTAAAtttttttAAATCCCAATTCAGAAATCAAT 33413
||||| | ||||| || | ||||| || ||| || |||||||| | |||
Sbjct 289694 ATGAAGTTGAACGGGTTCTTGGTGTTGTAGATCTTTCCAACGCCCAATTCCACCAGCAAA 289753
Query 33414 CTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATGAGTTTA 33473
| || || ||||| || || || ||| | || || ||||| || || || ||
Sbjct 289754 CGGTCCGCCACGAACTCAATGTACTGCGACATGAGGTCGCAGTTCATGCCAATAAGGTTT 289813
Query 33474 ACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATGGATACCGCATTTGTTATAATAAAT 33533
|| || || || | || || || || || ||||||| ||||||| || ||
Sbjct 289814 ACGGGCAGGGCATCGGTGAGGAACTCCTGCTCAATGGCCACCGCATCACGGATGATCTCG 289873
Query 33534 CTAACGGTTTCTTCACTCGGTGGATGTAATAAATGTTTAAACATCAAACATGCGAAATCG 33593
| | | || || ||| | || | | ||| | ||||||| ||||| ||
Sbjct 289874 ATGATGCGCTCGCGCCTGGGTCGCTGAACCAGATGCTGGAACATCAGCACGGCGAAGTCA 289933
Query 33594 CAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATTAGG 33653
||||||| |||||||| | || | |||||| || || || || || ||||| |
Sbjct 289934 CAGTGCAATCCCTCGTCCCGGGAGATCAGTTCGTTGGAGAAGGTCAGGCCCGGCATCAAA 289993
Query 33654 CCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCTACT 33713
|| || || || ||||| || ||||| ||||| ||| |||||||| || || ||
Sbjct 289994 CCGCGTTTCTTTAGCCAGAAAATGGAGGCGAAACTGCCGCTGAAGAAGATGCCCTCCACG 290053
Query 33714 GCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCG--CTGTCATGT-ATCCACTTTTGA 33770
|| |||||||| || | | ||| || || |||| || | | ||||| |
Sbjct 290054 GCGGCAAAGGCGATGATGCGCTCCCCGAAATTGGCGGACTTGGAGGAGATCCAGGACAGG 290113
Query 33771 GCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGttt 33830
||||| || ||||| || || |||||||| || ||||| || || ||||||| |
Sbjct 290114 GCCCAGTCCGCCTTGCGCTTCACCGCTGGCATCGTCTCGATGGCGTTGAACAGATAGTCT 290173
Query 33831 ttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATG 33890
| | ||| | ||||| ||||||| | || ||||| ||||| || | |
Sbjct 290174 CGCTGGTGCGGATCCCGGATGTAAGTGTCGATCAGCACGCTGTACATCTCCGAGTGCACG 290233
Query 33891 TTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTGTA 33950
|| || ||||| ||||| ||||||||||| || | ||||| || |||||||| || |
Sbjct 290234 TTCTCCATGGCGATCTGGAATCCGTAGAAGCAGCGGGCCTCCGTGATCTGCACCTCCTGA 290293
Query 33951 CAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGGCTGCAAAAAACGCCA 34008
| || || || | | || ||||| || || ||||| ||| || || || ||||
Sbjct 290294 CTGAAGCGCTCCACGAGGTTCTCATTAACAATGCCATCGGAGGCGGCGAAGAAGGCCA 290351
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629637952402320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |