Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20rhopaloa_20[refseq_20GCF_5F000236305.1_202013-02-22] 22,819 sequences; 197,375,704 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq8502 448 7e-121 seq1813 448 7e-121 seq8501 439 4e-118 seq22136 159 5e-34 >seq8502 Length=4749 Score = 448 bits (496), Expect = 7e-121 Identities = 1224/1861 (66%), Gaps = 25/1861 (1%) Strand=Plus/Plus Query 78718 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 78777 ||||| ||||| | | || || || || || || || ||||||||||| || || || Sbjct 1164 GTGAACTGAATTGCATTGGCGGCTGGCTTTGTGCGCAGGTAGTACATTCCGGTCTTAAGT 1223 Query 78778 CCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 78837 || |||| ||| || || || ||| | ||| ||| | || || || | | Sbjct 1224 CCAGCTTTCCAAGAGTAAAAGTGAATGGACGTCAATTTTCCATAGTTTGGCTCAGCCACA 1283 Query 78838 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 78897 || ||||| | || |||||||| || || || || || | || || |||||||| || Sbjct 1284 TGAATATTGAACGACTGACTTTGGTCTATAAACGCCCCACGATCAGCGGCCATTTTAATT 1343 Query 78898 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAAC-TCGCTTAATATCTTCTGGAAG 78956 | | ||| || |||||||| | |||||| |||| |||| | | ||| | | | Sbjct 1344 GTGGACTTCACTGAGATTTCCCACACAGTTTTGTAAAGATCGCGAACTTTCTGGGGAATG 1403 Query 78957 GTTTGTATTC--TGAATGGATCCACCATCTGCCA-TAATCCTATTCTTGATCTCTTCATT 79013 || | || | || ||||| || || ||| | | ||| ||||| || || |||| Sbjct 1404 GTCTCAATACCTTGGATGGAGCC-CCTGCTGGAAATGATCTGGTTCTTCATGTCGTCATC 1462 Query 79014 CCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCC 79073 ||| || | ||| ||||| | || | | ||| | || || || || ||||| || Sbjct 1463 CCACAAGTCGAGCTCAGTTAAGTCCCTCAACAAATGATGGTTGACCACCTGGAATTCACC 1522 Query 79074 AGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCGATTCATTATTTCC 79133 ||||| |||| | || ||||| || ||||||| || || | ||||| || ||||| Sbjct 1523 AGACAGAACTCGTCTGGTATAAATGTTCGTGGTATAGGGCTCGAAAGATTCGTTGTTTCC 1582 Query 79134 CAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACC 79193 || |||||||||||| || || || |||||||| || || | | || | | ||| Sbjct 1583 CATAATTTGAGCAGTAGACGCAGTAGGCATAGGGGCAACAAGCAGGGAGTTCCGGACACC 1642 Query 79194 GTATGATCTGATTTTATCTTTTAGAGATTCCCAATCCCAAAGATCAGACGGGACAACATT 79253 || | |||| || ||||| || ||||||||| || | | || | Sbjct 1643 GTGCTTTTTGATGGACTCCTTTAGTTTTTGCCAATCCCACAGGTTCGTTGGCTGTTTGTC 1702 Query 79254 CCAAAGATCATATTGTAGAATACCGTTACTAGCGTATGATCCTGTGTATGTTTCATAAGG 79313 ||| | || || || ||||| || || || || ||| || || ||||| || Sbjct 1703 CCACATGTCGTACTGCAGAATTCCTTTGCTCACGGGGCTTCCCTCATAGGTCTCATAGGG 1762 Query 79314 TCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGCTCCGTAATAAATGGTTTCGAA 79373 ||||| | || | |||||| || || || | || ||||| ||||| ||||| || Sbjct 1763 ACCTTCGACCTGCGCCAGTTCACAGCTGGCTTCCAGGGCACCGTAGTAAATCGTTTCAAA 1822 Query 79374 AATCTTCTTATTGA----GATCTTGTGCTTCTAGGCTATCAAATGGATAATTTAAGAGAA 79429 |||| || ||| | || | |||||| || ||| |||| | | ||||| Sbjct 1823 TATCTGCTGATTCAAAAAGACCG---GCTTCTTCACTTTCATATGGGAATCGCATGAGAA 1879 Query 79430 TAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAAA 79489 | || ||||| || || || |||||||| || || | || | ||||||| ||| || Sbjct 1880 TCAAGGCGTCAGCGAAACCCTGAACACCGATGCCCACGGGACGATGTCTCAAATTGGATT 1939 Query 79490 TTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTCCTGACTA 79549 | | || ||||| | |||||| | || ||||| || || || |||||||| || | Sbjct 1940 TCTTTGCCTCTGGGAGGGGATAAAAGTTGATATCAATTATCTTGTTGAGATTTTTGGTAA 1999 Query 79550 TTACTTTGACCACATCCTTTAGTTTGAGAAAATCAAATCGTCCATC---TATTACAAACA 79606 ||| || ||||| ||||| | ||||||||| | || | | ||||||| Sbjct 2000 CCGTCTTGGTAACTTCCTTAAGTTTCTGGAAATCAAATTTTTTCTCGGGTGTGACAAACA 2059 Query 79607 TGTTCAACGCGACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTA 79666 |||| | |||| |||||||| || || || || | ||||| | | ||||| | Sbjct 2060 TGTTAAGAGCGATGGATGCCAGGTTGCACACTGCAATCTCATCCGGCGAGGAATATTCAA 2119 Query 79667 TTATTTCAGTGCAGAGGTTACTACACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTT 79726 ||||| ||||| | ||| || ||||||||||| || | || || || || || || Sbjct 2120 CGATTTCTGTGCACAAGTTGCTGCACTTAATGGTGCCAACGTTCTGCTGGTTGCTTTTCC 2179 Query 79727 TGTTACACGCATCCTTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAA 79786 |||| || |||||||| | || || |||| | |||||||| | ||| || || |||| Sbjct 2180 TGTTGCAGGCATCCTTGAAGAGCATATACGGGTTGCCAGTTTCCACCTGCGACTCAATAA 2239 Query 79787 TCGCTTTCCAGACG-ACTCGAGCCTTTATTATAGACTTGTATCTCTTTTCTCTT--TCGT 79843 | || ||| | | ||| ||||||| | | || | | ||||| |||| Sbjct 2240 TGGCAAACCACAAGGACT-GAGCCTTGACCGTTCGGTTCG--CACGACCCTCTTGCTCGT 2296 Query 79844 ATT--GTGTATATAATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTC 79901 ||| ||||| | || ||||| || || ||||| ||||||| | || || |||| Sbjct 2297 ATTTAGTGTACAGCTTC--TCGAATTCATCGCCCCAGACATCGTGCAGGCCCGGGCATTT 2354 Query 79902 GTCAGGACACATCAACGACCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGG 79961 || || ||||||| |||||| | ||| ||| || |||||||| |||||||| || Sbjct 2355 GTGCGGGCACATCAGCGACCAATTCTCATTGGCCTCGACGCGTTTCATGAAGAGATCGGG 2414 Query 79962 AATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTT 80021 |||||||| || ||| ||||| | || | || |||||| || || || || || || Sbjct 2415 TATCCAAAGGGCGTAAAACAGATCGCGGGCGCGATTCTCCTCCTTGCCAGTGTTTTTCTT 2474 Query 80022 AAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCC 80081 || || || ||| | | | ||| || ||||| || |||| ||| ||||| | | || Sbjct 2475 GAGTTCCAGAAACTCAAAGACATCCGAGTGCCAGGGCTCCAGGTAAATGGCAAAGGCACC 2534 Query 80082 CGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACAT 80141 || || ||| || |||||||| | || | || || || | || |||| ||| Sbjct 2535 GGGACGCTTGCCGCCACCCTGATCCACATAGCGTGCCACATTGTTGAAGACCCTCAGCAT 2594 Query 80142 TGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAAT 80201 |||| | |||||||| || ||||| || ||| | ||| || | || | || || || Sbjct 2595 GGGAACTAGGCCATTGGAAGTGCCATTCGTGCCGCAAATAGAGGTGCCTTTTGCCCGGAT 2654 Query 80202 ATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAA 80261 | || || || || || |||||| ||| ||||| | ||||| ||| | Sbjct 2655 GCAATGAACATTCAGTCCAATGCCACCTGCCGATTTCGAGATCATGGCGCAGTGTTCCAC 2714 Query 80262 CGTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACAT 80321 || | | |||||||||| || ||| | ||||| | | || |||||| ||||| Sbjct 2715 CGATTTAAAGATGCCCTCGATCGAGTCAGCCGTCATGGTCAAAAGGAAACAGGAAGACAG 2774 Query 80322 TTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTC 80381 || | ||| | || | || ||| | || || || ||||| || || || || Sbjct 2775 CTGCGGGCGATTTGTGGCAGCGGCAAAAAGCGTTGGCGATGCGTGGGTGAAGAATCGCTC 2834 Query 80382 AGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGAATTCCTACCGC 80441 ||||| || ||||| || || | || | || |||||| | ||| ||||||| || Sbjct 2835 AGACAAAAGGTTGTAGGTTTCCACGGCCGCATCAATATCCTCTCCATGGATTCCTATTGC 2894 Query 80442 GACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTA 80501 || ||||| |||||||| || || | || ||||||| |||| | |||| || || Sbjct 2895 CACGCGCATCAACATGTGTTGCGGACGCTCGGCGATCTTTCCATTTCTCTTCAGCAGATA 2954 Query 80502 AGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAAT 80561 ||| ||| | ||||| || |||||||||||||| ||| || || || ||||| || Sbjct 2955 AGAACGTTCGAGGGTTTTGAATCCAAAATAGTTGTACCCAAAATCACGATCATAAATTAT 3014 Query 80562 A 80562 | Sbjct 3015 A 3015 >seq1813 Length=4749 Score = 448 bits (496), Expect = 7e-121 Identities = 1221/1857 (66%), Gaps = 18/1857 (1%) Strand=Plus/Plus Query 78718 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 78777 ||||| ||||| | | || || || || || || || ||||||||||| || || || Sbjct 1164 GTGAACTGAATTGCATTGGCGGCTGGCTTTGTGCGCAGGTAGTACATTCCGGTCTTAAGT 1223 Query 78778 CCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 78837 || |||| ||| || || || ||| | ||| ||| | || || || | | Sbjct 1224 CCAGCTTTCCAAGAGTAAAAGTGAATGGACGTCAATTTTCCATAGTTTGGCTCAGCCACA 1283 Query 78838 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 78897 || ||||| | || |||||||| || || || || || | || || |||||||| || Sbjct 1284 TGAATATTGAACGACTGACTTTGGTCTATAAACGCCCCACGATCAGCGGCCATTTTAATT 1343 Query 78898 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAAC-TCGCTTAATATCTTCTGGAAG 78956 | | ||| || |||||||| | |||||| |||| |||| | | ||| | | | Sbjct 1344 GTGGACTTCACTGAGATTTCCCACACAGTTTTGTAAAGATCGCGAACTTTCTGGGGAATG 1403 Query 78957 GTTTGTATTC--TGAATGGATCCACCATCTGCCA-TAATCCTATTCTTGATCTCTTCATT 79013 || | || | || ||||| || || ||| | | ||| ||||| || || |||| Sbjct 1404 GTCTCAATACCTTGGATGGAGCC-CCTGCTGGAAATGATCTGGTTCTTCATGTCGTCATC 1462 Query 79014 CCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCC 79073 ||| || | ||| ||||| | || | | ||| | || || || || ||||| || Sbjct 1463 CCACAAGTCGAGCTCAGTTAAGTCCCTCAACAAATGATGGTTGACCACCTGGAATTCACC 1522 Query 79074 AGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCGATTCATTATTTCC 79133 ||||| |||| | || ||||| || ||||||| || || | ||||| || ||||| Sbjct 1523 AGACAGAACTCGTCTGGTATAAATGTTCGTGGTATAGGGCTCGAAAGATTCGTTGTTTCC 1582 Query 79134 CAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACC 79193 || |||||||||||| || || || |||||||| || || | | || | | ||| Sbjct 1583 CATAATTTGAGCAGTAGACGCAGTAGGCATAGGGGCAACAAGCAGGGAGTTCCGGACACC 1642 Query 79194 GTATGATCTGATTTTATCTTTTAGAGATTCCCAATCCCAAAGATCAGACGGGACAACATT 79253 || | |||| || ||||| || ||||||||| || | | || | Sbjct 1643 GTGCTTTTTGATGGACTCCTTTAGTTTTTGCCAATCCCACAGGTTCGTTGGCTGTTTGTC 1702 Query 79254 CCAAAGATCATATTGTAGAATACCGTTACTAGCGTATGATCCTGTGTATGTTTCATAAGG 79313 ||| | || || || ||||| || || || || ||| || || ||||| || Sbjct 1703 CCACATGTCGTACTGCAGAATTCCTTTGCTCACGGGGCTTCCCTCATAGGTCTCATAGGG 1762 Query 79314 TCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGCTCCGTAATAAATGGTTTCGAA 79373 ||||| | || | |||||| || || || | || ||||| ||||| ||||| || Sbjct 1763 ACCTTCGACCTGCGCCAGTTCACAGCTGGCTTCCAGGGCACCGTAGTAAATCGTTTCAAA 1822 Query 79374 AATCTTCTTATTGAGATCTTGTGCTTCTAGGCTATCAAATGGATAATTTAAGAGAATAAA 79433 |||| || ||| | | || ||| || ||| |||| | | |||||| || Sbjct 1823 TATCTGCTGATTCAAAAGACCGGCCTCTTCACTTTCATATGGGAATCGCATGAGAATCAA 1882 Query 79434 CGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAAATTTC 79493 ||||| || || || |||||||| || || | || | ||||||| ||| || | | Sbjct 1883 GGCGTCAGCGAAACCCTGAACACCGATGCCCACGGGACGATGTCTCAAATTGGATTTCTT 1942 Query 79494 AGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTCCTGACTATTAC 79553 || ||||| | |||||| | || ||||| || || || |||||||| || | Sbjct 1943 TGCCTCTGGGAGGGGATAAAAGTTGATATCAATTATCTTGTTGAGATTTTTGGTAACCGT 2002 Query 79554 TTTGACCACATCCTTTAGTTTGAGAAAATCAAATCGTCCATC---TATTACAAACATGTT 79610 ||| || ||||| ||||| | ||||||||| | || | | ||||||||||| Sbjct 2003 CTTGGTAACTTCCTTAAGTTTCTGGAAATCAAATTTTTTCTCGGGTGTGACAAACATGTT 2062 Query 79611 CAACGCGACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTAT 79670 | |||| |||||||| || || || || | ||||| | | ||||| | || Sbjct 2063 AAGAGCGATGGATGCCAGGTTGCACACTGCAATCTCATCCGGCGAGGAATATTCAACGAT 2122 Query 79671 TTCAGTGCAGAGGTTACTACACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTT 79730 ||| ||||| | ||| || ||||||||||| || | || || || || || || |||| Sbjct 2123 TTCTGTGCACAAGTTGCTGCACTTAATGGTGCCAACGTTCTGCTGGTTGCTTTTCCTGTT 2182 Query 79731 ACACGCATCCTTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGC 79790 || |||||||| | || || |||| | |||||||| | ||| || || ||||| || Sbjct 2183 GCAGGCATCCTTGAAGAGCATATACGGGTTGCCAGTTTCCACCTGCGACTCAATAATGGC 2242 Query 79791 TTTCCAGACG-ACTCGAGCCTTTATTATAGACTTGTATCTCTTTTCTCTT--TCGTATT- 79846 ||| | | ||| ||||||| | | || | | ||||| ||||||| Sbjct 2243 AAACCACAAGGACT-GAGCCTTGACCGTTCGGTTCG--CACGACCCTCTTGCTCGTATTT 2299 Query 79847 -GTGTATATAATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCA 79905 ||||| | || ||||| || || ||||| ||||||| | || || |||| || Sbjct 2300 AGTGTACAGCTTC--TCGAATTCATCGCCCCAGACATCGTGCAGGCCCGGGCATTTGTGC 2357 Query 79906 GGACACATCAACGACCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATC 79965 || ||||||| |||||| | ||| ||| || |||||||| |||||||| || ||| Sbjct 2358 GGGCACATCAGCGACCAATTCTCATTGGCCTCGACGCGTTTCATGAAGAGATCGGGTATC 2417 Query 79966 CAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGA 80025 ||||| || ||| ||||| | || | || |||||| || || || || || || || Sbjct 2418 CAAAGGGCGTAAAACAGATCGCGGGCGCGATTCTCCTCCTTGCCAGTGTTTTTCTTGAGT 2477 Query 80026 TCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGT 80085 || || ||| | | | ||| || ||||| || |||| ||| ||||| | | || || Sbjct 2478 TCCAGAAACTCAAAGACATCCGAGTGCCAGGGCTCCAGGTAAATGGCAAAGGCACCGGGA 2537 Query 80086 CGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGA 80145 || ||| || |||||||| | || | || || || | || |||| ||| ||| Sbjct 2538 CGCTTGCCGCCACCCTGATCCACATAGCGTGCCACATTGTTGAAGACCCTCAGCATGGGA 2597 Query 80146 ATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTA 80205 | | |||||||| || ||||| || ||| | ||| || | || | || || || | Sbjct 2598 ACTAGGCCATTGGAAGTGCCATTCGTGCCGCAAATAGAGGTGCCTTTTGCCCGGATGCAA 2657 Query 80206 CTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTA 80265 || || || || || |||||| ||| ||||| | ||||| ||| | || Sbjct 2658 TGAACATTCAGTCCAATGCCACCTGCCGATTTCGAGATCATGGCGCAGTGTTCCACCGAT 2717 Query 80266 TCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGG 80325 | | |||||||||| || ||| | ||||| | | || |||||| ||||| || Sbjct 2718 TTAAAGATGCCCTCGATCGAGTCAGCCGTCATGGTCAAAAGGAAACAGGAAGACAGCTGC 2777 Query 80326 TGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAC 80385 | ||| | || | || ||| | || || || ||||| || || || |||||| Sbjct 2778 GGGCGATTTGTGGCAGCGGCAAAAAGCGTTGGCGATGCGTGGGTGAAGAATCGCTCAGAC 2837 Query 80386 AGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCGACA 80445 | || ||||| || || | || | || |||||| | ||| ||||||| || || Sbjct 2838 AAAAGGTTGTAGGTTTCCACGGCCGCATCAATATCCTCTCCATGGATTCCTATTGCCACG 2897 Query 80446 CGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGAT 80505 ||||| |||||||| || || | || ||||||| |||| | |||| || ||||| Sbjct 2898 CGCATCAACATGTGTTGCGGACGCTCGGCGATCTTTCCATTTCTCTTCAGCAGATAAGAA 2957 Query 80506 TTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATA 80562 ||| | ||||| || |||||||||||||| ||| || || || ||||| ||| Sbjct 2958 CGTTCGAGGGTTTTGAATCCAAAATAGTTGTACCCAAAATCACGATCATAAATTATA 3014 >seq8501 Length=20033 Score = 439 bits (486), Expect = 4e-118 Identities = 1225/1861 (66%), Gaps = 24/1861 (1%) Strand=Plus/Minus Query 78718 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 78777 ||||| ||||| | | || || || || || || || ||||||||||| || || || Sbjct 2792 GTGAACTGAATTGCATTGGCGGCTGGCTTTGTGCGCAGGTAGTACATTCCGGTCTTAAGT 2733 Query 78778 CCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 78837 || |||| ||| || || || ||| | ||| ||| | || || || | | Sbjct 2732 CCAGCTTTCCAAGAGTAAAAGTGAATGGACGTCAATTTTCCATAGTTTGGCTCAGCCACA 2673 Query 78838 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 78897 || ||||| | || |||||||| || || || || || | || || |||||||| || Sbjct 2672 TGAATATTGAACGACTGACTTTGGTCTATAAACGCCCCACGATCAGCGGCCATTTTAATT 2613 Query 78898 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAAC-TCGCTTAATATCTTCTGGAAG 78956 | | ||| || |||||||| | |||||| |||| |||| | | ||| | | | Sbjct 2612 GTGGACTTCACTGAGATTTCCCACACAGTTTTGTAAAGATCGCGAACTTTCTGGGGAATG 2553 Query 78957 GTTTGTATTC--TGAATGGATCCACCATCTGCCA-TAATCCTATTCTTGATCTCTTCATT 79013 || | || | || ||||| || || ||| | | ||| ||||| || || |||| Sbjct 2552 GTCTCAATACCTTGGATGGAGCC-CCTGCTGGAAATGATCTGGTTCTTCATGTCGTCATC 2494 Query 79014 CCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCC 79073 ||| || | ||| ||||| | || | | ||| | || || || || ||||| || Sbjct 2493 CCACAAGTCGAGCTCAGTTAAGTCCCTCAACAAATGATGGTTGACCACCTGGAATTCACC 2434 Query 79074 AGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCGATTCATTATTTCC 79133 ||||| |||| | || ||||| || ||||||| || || | ||||| || ||||| Sbjct 2433 AGACAGAACTCGTCTGGTATAAATGTTCGTGGTATAGGGCTCGAAAGATTCGTTGTTTCC 2374 Query 79134 CAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACC 79193 || |||||||||||| || || || |||||||| || || | | || | | ||| Sbjct 2373 CATAATTTGAGCAGTAGACGCAGTAGGCATAGGGGCAACAAGCAGGGAGTTCCGGACACC 2314 Query 79194 GTATGATCTGATTTTATCTTTTAGAGATTCCCAATCCCAAAGATCAGACGGGACAACATT 79253 || | |||| || ||||| || ||||||||| || | | || | Sbjct 2313 GTGCTTTTTGATGGACTCCTTTAGTTTTTGCCAATCCCACAGGTTCGTTGGCTGTTTGTC 2254 Query 79254 CCAAAGATCATATTG-TAGAATACCGTTACTAGCGTA--TGATCCTGTGTATGTT-TCAT 79309 ||| | || || || |||||| || || || || | | ||| || || |||| Sbjct 2253 CCACATGTCGTACTGCTAGAATTCCTTTGCTCACGGGGCTTACCCTCA-TAGGTACTCAT 2195 Query 79310 AAGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGCTCCGTAATAAATGGTTT 79369 | || ||||| | || | |||||| || || || | || ||||| ||||| |||| Sbjct 2194 AGGGACCTTCGACCTGCGCCAGTTCACAGCTGGCTTCCAGGGCACCGTAGTAAATCGTTT 2135 Query 79370 CGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTATCAAATGGATAATTTAAGAGAA 79429 | || |||| || ||| | | |||||| || ||| |||| | | ||||| Sbjct 2134 CAAATATCTGCTGATTCAAAAGACCGGCTTCTTCACTTTCATATGGGAATCGCATGAGAA 2075 Query 79430 TAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAAA 79489 | || ||||| || || || |||||||| || || | || | ||||||| ||| || Sbjct 2074 TCAAGGCGTCAGCGAAACCCTGAACACCGATGCCCACGGGACGATGTCTCAAATTGGATT 2015 Query 79490 TTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTCCTGACTA 79549 | | || ||||| | |||||| | || ||||| || || || |||||||| || | Sbjct 2014 TCTTTGCCTCTGGGAGGGGATAAAAGTTGATATCAATTATCTTGTTGAGATTTTTGGTAA 1955 Query 79550 TTACTTTGACCACATCCTTTAGTTTGAGAAAATCAAATCGTCCATC---TATTACAAACA 79606 ||| || ||||| ||||| | ||||||||| | || | | ||||||| Sbjct 1954 CCGTCTTGGTAACTTCCTTAAGTTTCTGGAAATCAAATTTTTTCTCGGGTGTGACAAACA 1895 Query 79607 TGTTCAACGCGACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTA 79666 |||| | |||| |||||||| || || || || | ||||| | | ||||| | Sbjct 1894 TGTTAAGAGCGATGGATGCCAGGTTGCACACTGCAATCTCATCCGGCGAGGAATATTCAA 1835 Query 79667 TTATTTCAGTGCAGAGGTTACTACACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTT 79726 ||||| ||||| | ||| || ||||||||||| || | || || || || || || Sbjct 1834 CGATTTCTGTGCACAAGTTGCTGCACTTAATGGTGCCAACGTTCTGCTGGTTGCTTTTCC 1775 Query 79727 TGTTACACGCATCCTTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAA 79786 |||| || |||||||| | || || |||| | |||||||| | ||| || || |||| Sbjct 1774 TGTTGCAGGCATCCTTGAAGAGCATATACGGGTTGCCAGTTTCCACCTGCGACTCAATAA 1715 Query 79787 TCGCTTTCCAGACG-ACTCGAGCCTTTATTATAGACTTGTATCTCTTTTCTCTT--TCGT 79843 | || ||| | | ||| ||||||| | | || | | ||||| |||| Sbjct 1714 TGGCAAACCACAAGGACT-GAGCCTTGACCGTTCGGTTCG--CACGACCCTCTTGCTCGT 1658 Query 79844 ATT--GTGTATATAATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTC 79901 ||| ||||| | || ||||| || || ||||| ||||||| | || || |||| Sbjct 1657 ATTTAGTGTACAGCTTC--TCGAATTCATCGCCCCAGACATCGTGCAGGCCCGGGCATTT 1600 Query 79902 GTCAGGACACATCAACGACCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGG 79961 || || ||||||| |||||| | ||| ||| || |||||||| |||||||| || Sbjct 1599 GTGCGGGCACATCAGCGACCAATTCTCATTGGCCTCGACGCGTTTCATGAAGAGATCGGG 1540 Query 79962 AATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTT 80021 |||||||| || ||| ||||| | || | || |||||| || || || || ||| | Sbjct 1539 TATCCAAAGGGCGTAAAACAGATCGCGGGCGCGATTCTCCTCCTTGCCAGTGTT-TTTCT 1481 Query 80022 AAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCC 80081 || || || ||| | | | ||| || ||||| || |||| ||| ||||| | | || Sbjct 1480 GAGTTCCAGAAACTCAAAGACATCCGAGTGCCAGGGCTCCAGGTAAATGGCAAAGGCACC 1421 Query 80082 CGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACAT 80141 || || ||| || |||||||| | || | || || || | || |||| ||| Sbjct 1420 GGGACGCTTGCCGCCACCCTGATCCACATAGCGTGCCACATTGTTGAAGACCCTCAGCAT 1361 Query 80142 TGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAAT 80201 |||| | |||||||| || ||||| || ||| | ||| || | || | || || || Sbjct 1360 GGGAACTAGGCCATTGGAAGTGCCATTCGTGCCGCAAATAGAGGTGCCTTTTGCCCGGAT 1301 Query 80202 ATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAA 80261 | || || || || || |||||| ||| ||||| | ||||| ||| | Sbjct 1300 GCAATGAACATTCAGTCCAATGCCACCTGCCGATTTCGAGATCATGGCGCAGTGTTCCAC 1241 Query 80262 CGTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACAT 80321 || | | |||||||||| || ||| | ||||| | | || |||||| ||||| Sbjct 1240 CGATTTAAAGATGCCCTCGATCGAGTCAGCCGTCATGGTCAAAAGGAAACAGGAAGACAG 1181 Query 80322 TTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTC 80381 || | ||| | || | || ||| | || || || ||||| || || || || Sbjct 1180 CTGCGGGCGATTTGTGGCAGCGGCAAAAAGCGTTGGCGATGCGTGGGTGAAGAATCGCTC 1121 Query 80382 AGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGAATTCCTACCGC 80441 ||||| || ||||| || || | || | || |||||| | ||| ||||||| || Sbjct 1120 AGACAAAAGGTTGTAGGTTTCCACGGCCGCATCAATATCCTCTCCATGGATTCCTATTGC 1061 Query 80442 GACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTA 80501 || ||||| |||||||| || || | || ||||||| |||| | |||| || || Sbjct 1060 CACGCGCATCAACATGTGTTGCGGACGCTCGGCGATCTTTCCATTTCTCTTCAGCAGATA 1001 Query 80502 AGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAAT 80561 ||| ||| | ||||| || |||||||||||||| ||| || || || ||||| || Sbjct 1000 AGAACGTTCGAGGGTTTTGAATCCAAAATAGTTGTACCCAAAATCACGATCATAAATTAT 941 Query 80562 A 80562 | Sbjct 940 A 940 >seq22136 Length=515022 Score = 159 bits (176), Expect = 5e-34 Identities = 470/720 (65%), Gaps = 7/720 (1%) Strand=Plus/Plus Query 49672 TGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTTCC 49731 ||||| || ||||| || ||||| || || || || || |||| || || | ||| Sbjct 289634 TGGTACTCGCCCACCTTCTTCTCGAAGAAGTTGGTCTTGCCGTCCAGGGAGATCATCTCC 289693 Query 49732 ATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATCAAT 49791 ||||| | ||||| || | || || || ||| || |||||||| | ||| Sbjct 289694 ATGAAGTTGAACGGGTTCTTGGTGTTGTAGATCTTTCCAACGCCCAATTCCACCAGCAAA 289753 Query 49792 CTATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTTA 49851 | ||||| || || || || || ||| | || || ||||| || ||||| || Sbjct 289754 CGGTCCGCCACGAACTCAATGTACTGCGACATGAGGTCGCAGTTCATGCCAATAAGGTTT 289813 Query 49852 ACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAATAGAT 49911 || || || || | || || || || || ||||||| |||||||| || || Sbjct 289814 ACGGGCAGGGCATCGGTGAGGAACTCCTGCTCAATGGCCACCGCATCACGGATGATCTCG 289873 Query 49912 CTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGAAATCG 49971 | | | || || ||| | || | | ||| | ||||||| ||||| || Sbjct 289874 ATGATGCGCTCGCGCCTGGGTCGCTGAACCAGATGCTGGAACATCAGCACGGCGAAGTCA 289933 Query 49972 CAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGG 50031 ||||||| |||||||| | || ||||||||||| || || || || ||||| | Sbjct 289934 CAGTGCAATCCCTCGTCCCGGGAGATCAGTTCGTTGGAGAAGGTCAGGCCCGGCATCAAA 289993 Query 50032 CCACGCTTTTTAAGCCAAAATATGGA--CGCAAATGACCCAGAAAAGAAGATTCCTTCTA 50089 || || || || ||||| || ||||| || || || | | | |||||||| || || | Sbjct 289994 CCGCGTTTCTTTAGCCAGAAAATGGAGGCGAAACTGCCGCTG--AAGAAGATGCCCTCCA 290051 Query 50090 CTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCG--CTGTCATG-TATCCACTTTT 50146 | ||||||||||| | | | ||| || || ||||| || | | ||||| Sbjct 290052 CGGCGGCAAAGGCGATGATGCGCTCCCCGAAATTGGCGGACTTGGAGGAGATCCAGGACA 290111 Query 50147 GAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGt 50206 | ||||| || ||||| || || |||||||| || ||||| || || ||||||| Sbjct 290112 GGGCCCAGTCCGCCTTGCGCTTCACCGCTGGCATCGTCTCGATGGCGTTGAACAGATAGT 290171 Query 50207 ttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAA 50266 | | | ||| | ||||| ||||||| | || ||||| ||||| || | Sbjct 290172 CTCGCTGGTGCGGATCCCGGATGTAAGTGTCGATCAGCACGCTGTACATCTCCGAGTGCA 290231 Query 50267 TGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTG 50326 ||| || ||||| ||||| ||||||||||| || | ||||| || |||||||| || Sbjct 290232 CGTTCTCCATGGCGATCTGGAATCCGTAGAAGCAGCGGGCCTCCGTGATCTGCACCTCCT 290291 Query 50327 TACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCA 50386 || || || || | | || ||||| || || || || ||| || || || |||| Sbjct 290292 GACTGAAGCGCTCCACGAGGTTCTCATTAACAATGCCATCGGAGGCGGCGAAGAAGGCCA 290351 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718063922803160