Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20rhopaloa_20[refseq_20GCF_5F000236305.1_202013-02-22]
22,819 sequences; 197,375,704 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq8502 448 7e-121
seq1813 448 7e-121
seq8501 439 4e-118
seq22136 159 5e-34
>seq8502
Length=4749
Score = 448 bits (496), Expect = 7e-121
Identities = 1224/1861 (66%), Gaps = 25/1861 (1%)
Strand=Plus/Plus
Query 78718 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 78777
||||| ||||| | | || || || || || || || ||||||||||| || || ||
Sbjct 1164 GTGAACTGAATTGCATTGGCGGCTGGCTTTGTGCGCAGGTAGTACATTCCGGTCTTAAGT 1223
Query 78778 CCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 78837
|| |||| ||| || || || ||| | ||| ||| | || || || | |
Sbjct 1224 CCAGCTTTCCAAGAGTAAAAGTGAATGGACGTCAATTTTCCATAGTTTGGCTCAGCCACA 1283
Query 78838 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 78897
|| ||||| | || |||||||| || || || || || | || || |||||||| ||
Sbjct 1284 TGAATATTGAACGACTGACTTTGGTCTATAAACGCCCCACGATCAGCGGCCATTTTAATT 1343
Query 78898 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAAC-TCGCTTAATATCTTCTGGAAG 78956
| | ||| || |||||||| | |||||| |||| |||| | | ||| | | |
Sbjct 1344 GTGGACTTCACTGAGATTTCCCACACAGTTTTGTAAAGATCGCGAACTTTCTGGGGAATG 1403
Query 78957 GTTTGTATTC--TGAATGGATCCACCATCTGCCA-TAATCCTATTCTTGATCTCTTCATT 79013
|| | || | || ||||| || || ||| | | ||| ||||| || || ||||
Sbjct 1404 GTCTCAATACCTTGGATGGAGCC-CCTGCTGGAAATGATCTGGTTCTTCATGTCGTCATC 1462
Query 79014 CCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCC 79073
||| || | ||| ||||| | || | | ||| | || || || || ||||| ||
Sbjct 1463 CCACAAGTCGAGCTCAGTTAAGTCCCTCAACAAATGATGGTTGACCACCTGGAATTCACC 1522
Query 79074 AGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCGATTCATTATTTCC 79133
||||| |||| | || ||||| || ||||||| || || | ||||| || |||||
Sbjct 1523 AGACAGAACTCGTCTGGTATAAATGTTCGTGGTATAGGGCTCGAAAGATTCGTTGTTTCC 1582
Query 79134 CAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACC 79193
|| |||||||||||| || || || |||||||| || || | | || | | |||
Sbjct 1583 CATAATTTGAGCAGTAGACGCAGTAGGCATAGGGGCAACAAGCAGGGAGTTCCGGACACC 1642
Query 79194 GTATGATCTGATTTTATCTTTTAGAGATTCCCAATCCCAAAGATCAGACGGGACAACATT 79253
|| | |||| || ||||| || ||||||||| || | | || |
Sbjct 1643 GTGCTTTTTGATGGACTCCTTTAGTTTTTGCCAATCCCACAGGTTCGTTGGCTGTTTGTC 1702
Query 79254 CCAAAGATCATATTGTAGAATACCGTTACTAGCGTATGATCCTGTGTATGTTTCATAAGG 79313
||| | || || || ||||| || || || || ||| || || ||||| ||
Sbjct 1703 CCACATGTCGTACTGCAGAATTCCTTTGCTCACGGGGCTTCCCTCATAGGTCTCATAGGG 1762
Query 79314 TCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGCTCCGTAATAAATGGTTTCGAA 79373
||||| | || | |||||| || || || | || ||||| ||||| ||||| ||
Sbjct 1763 ACCTTCGACCTGCGCCAGTTCACAGCTGGCTTCCAGGGCACCGTAGTAAATCGTTTCAAA 1822
Query 79374 AATCTTCTTATTGA----GATCTTGTGCTTCTAGGCTATCAAATGGATAATTTAAGAGAA 79429
|||| || ||| | || | |||||| || ||| |||| | | |||||
Sbjct 1823 TATCTGCTGATTCAAAAAGACCG---GCTTCTTCACTTTCATATGGGAATCGCATGAGAA 1879
Query 79430 TAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAAA 79489
| || ||||| || || || |||||||| || || | || | ||||||| ||| ||
Sbjct 1880 TCAAGGCGTCAGCGAAACCCTGAACACCGATGCCCACGGGACGATGTCTCAAATTGGATT 1939
Query 79490 TTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTCCTGACTA 79549
| | || ||||| | |||||| | || ||||| || || || |||||||| || |
Sbjct 1940 TCTTTGCCTCTGGGAGGGGATAAAAGTTGATATCAATTATCTTGTTGAGATTTTTGGTAA 1999
Query 79550 TTACTTTGACCACATCCTTTAGTTTGAGAAAATCAAATCGTCCATC---TATTACAAACA 79606
||| || ||||| ||||| | ||||||||| | || | | |||||||
Sbjct 2000 CCGTCTTGGTAACTTCCTTAAGTTTCTGGAAATCAAATTTTTTCTCGGGTGTGACAAACA 2059
Query 79607 TGTTCAACGCGACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTA 79666
|||| | |||| |||||||| || || || || | ||||| | | ||||| |
Sbjct 2060 TGTTAAGAGCGATGGATGCCAGGTTGCACACTGCAATCTCATCCGGCGAGGAATATTCAA 2119
Query 79667 TTATTTCAGTGCAGAGGTTACTACACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTT 79726
||||| ||||| | ||| || ||||||||||| || | || || || || || ||
Sbjct 2120 CGATTTCTGTGCACAAGTTGCTGCACTTAATGGTGCCAACGTTCTGCTGGTTGCTTTTCC 2179
Query 79727 TGTTACACGCATCCTTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAA 79786
|||| || |||||||| | || || |||| | |||||||| | ||| || || ||||
Sbjct 2180 TGTTGCAGGCATCCTTGAAGAGCATATACGGGTTGCCAGTTTCCACCTGCGACTCAATAA 2239
Query 79787 TCGCTTTCCAGACG-ACTCGAGCCTTTATTATAGACTTGTATCTCTTTTCTCTT--TCGT 79843
| || ||| | | ||| ||||||| | | || | | ||||| ||||
Sbjct 2240 TGGCAAACCACAAGGACT-GAGCCTTGACCGTTCGGTTCG--CACGACCCTCTTGCTCGT 2296
Query 79844 ATT--GTGTATATAATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTC 79901
||| ||||| | || ||||| || || ||||| ||||||| | || || ||||
Sbjct 2297 ATTTAGTGTACAGCTTC--TCGAATTCATCGCCCCAGACATCGTGCAGGCCCGGGCATTT 2354
Query 79902 GTCAGGACACATCAACGACCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGG 79961
|| || ||||||| |||||| | ||| ||| || |||||||| |||||||| ||
Sbjct 2355 GTGCGGGCACATCAGCGACCAATTCTCATTGGCCTCGACGCGTTTCATGAAGAGATCGGG 2414
Query 79962 AATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTT 80021
|||||||| || ||| ||||| | || | || |||||| || || || || || ||
Sbjct 2415 TATCCAAAGGGCGTAAAACAGATCGCGGGCGCGATTCTCCTCCTTGCCAGTGTTTTTCTT 2474
Query 80022 AAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCC 80081
|| || || ||| | | | ||| || ||||| || |||| ||| ||||| | | ||
Sbjct 2475 GAGTTCCAGAAACTCAAAGACATCCGAGTGCCAGGGCTCCAGGTAAATGGCAAAGGCACC 2534
Query 80082 CGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACAT 80141
|| || ||| || |||||||| | || | || || || | || |||| |||
Sbjct 2535 GGGACGCTTGCCGCCACCCTGATCCACATAGCGTGCCACATTGTTGAAGACCCTCAGCAT 2594
Query 80142 TGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAAT 80201
|||| | |||||||| || ||||| || ||| | ||| || | || | || || ||
Sbjct 2595 GGGAACTAGGCCATTGGAAGTGCCATTCGTGCCGCAAATAGAGGTGCCTTTTGCCCGGAT 2654
Query 80202 ATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAA 80261
| || || || || || |||||| ||| ||||| | ||||| ||| |
Sbjct 2655 GCAATGAACATTCAGTCCAATGCCACCTGCCGATTTCGAGATCATGGCGCAGTGTTCCAC 2714
Query 80262 CGTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACAT 80321
|| | | |||||||||| || ||| | ||||| | | || |||||| |||||
Sbjct 2715 CGATTTAAAGATGCCCTCGATCGAGTCAGCCGTCATGGTCAAAAGGAAACAGGAAGACAG 2774
Query 80322 TTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTC 80381
|| | ||| | || | || ||| | || || || ||||| || || || ||
Sbjct 2775 CTGCGGGCGATTTGTGGCAGCGGCAAAAAGCGTTGGCGATGCGTGGGTGAAGAATCGCTC 2834
Query 80382 AGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGAATTCCTACCGC 80441
||||| || ||||| || || | || | || |||||| | ||| ||||||| ||
Sbjct 2835 AGACAAAAGGTTGTAGGTTTCCACGGCCGCATCAATATCCTCTCCATGGATTCCTATTGC 2894
Query 80442 GACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTA 80501
|| ||||| |||||||| || || | || ||||||| |||| | |||| || ||
Sbjct 2895 CACGCGCATCAACATGTGTTGCGGACGCTCGGCGATCTTTCCATTTCTCTTCAGCAGATA 2954
Query 80502 AGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAAT 80561
||| ||| | ||||| || |||||||||||||| ||| || || || ||||| ||
Sbjct 2955 AGAACGTTCGAGGGTTTTGAATCCAAAATAGTTGTACCCAAAATCACGATCATAAATTAT 3014
Query 80562 A 80562
|
Sbjct 3015 A 3015
>seq1813
Length=4749
Score = 448 bits (496), Expect = 7e-121
Identities = 1221/1857 (66%), Gaps = 18/1857 (1%)
Strand=Plus/Plus
Query 78718 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 78777
||||| ||||| | | || || || || || || || ||||||||||| || || ||
Sbjct 1164 GTGAACTGAATTGCATTGGCGGCTGGCTTTGTGCGCAGGTAGTACATTCCGGTCTTAAGT 1223
Query 78778 CCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 78837
|| |||| ||| || || || ||| | ||| ||| | || || || | |
Sbjct 1224 CCAGCTTTCCAAGAGTAAAAGTGAATGGACGTCAATTTTCCATAGTTTGGCTCAGCCACA 1283
Query 78838 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 78897
|| ||||| | || |||||||| || || || || || | || || |||||||| ||
Sbjct 1284 TGAATATTGAACGACTGACTTTGGTCTATAAACGCCCCACGATCAGCGGCCATTTTAATT 1343
Query 78898 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAAC-TCGCTTAATATCTTCTGGAAG 78956
| | ||| || |||||||| | |||||| |||| |||| | | ||| | | |
Sbjct 1344 GTGGACTTCACTGAGATTTCCCACACAGTTTTGTAAAGATCGCGAACTTTCTGGGGAATG 1403
Query 78957 GTTTGTATTC--TGAATGGATCCACCATCTGCCA-TAATCCTATTCTTGATCTCTTCATT 79013
|| | || | || ||||| || || ||| | | ||| ||||| || || ||||
Sbjct 1404 GTCTCAATACCTTGGATGGAGCC-CCTGCTGGAAATGATCTGGTTCTTCATGTCGTCATC 1462
Query 79014 CCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCC 79073
||| || | ||| ||||| | || | | ||| | || || || || ||||| ||
Sbjct 1463 CCACAAGTCGAGCTCAGTTAAGTCCCTCAACAAATGATGGTTGACCACCTGGAATTCACC 1522
Query 79074 AGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCGATTCATTATTTCC 79133
||||| |||| | || ||||| || ||||||| || || | ||||| || |||||
Sbjct 1523 AGACAGAACTCGTCTGGTATAAATGTTCGTGGTATAGGGCTCGAAAGATTCGTTGTTTCC 1582
Query 79134 CAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACC 79193
|| |||||||||||| || || || |||||||| || || | | || | | |||
Sbjct 1583 CATAATTTGAGCAGTAGACGCAGTAGGCATAGGGGCAACAAGCAGGGAGTTCCGGACACC 1642
Query 79194 GTATGATCTGATTTTATCTTTTAGAGATTCCCAATCCCAAAGATCAGACGGGACAACATT 79253
|| | |||| || ||||| || ||||||||| || | | || |
Sbjct 1643 GTGCTTTTTGATGGACTCCTTTAGTTTTTGCCAATCCCACAGGTTCGTTGGCTGTTTGTC 1702
Query 79254 CCAAAGATCATATTGTAGAATACCGTTACTAGCGTATGATCCTGTGTATGTTTCATAAGG 79313
||| | || || || ||||| || || || || ||| || || ||||| ||
Sbjct 1703 CCACATGTCGTACTGCAGAATTCCTTTGCTCACGGGGCTTCCCTCATAGGTCTCATAGGG 1762
Query 79314 TCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGCTCCGTAATAAATGGTTTCGAA 79373
||||| | || | |||||| || || || | || ||||| ||||| ||||| ||
Sbjct 1763 ACCTTCGACCTGCGCCAGTTCACAGCTGGCTTCCAGGGCACCGTAGTAAATCGTTTCAAA 1822
Query 79374 AATCTTCTTATTGAGATCTTGTGCTTCTAGGCTATCAAATGGATAATTTAAGAGAATAAA 79433
|||| || ||| | | || ||| || ||| |||| | | |||||| ||
Sbjct 1823 TATCTGCTGATTCAAAAGACCGGCCTCTTCACTTTCATATGGGAATCGCATGAGAATCAA 1882
Query 79434 CGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAAATTTC 79493
||||| || || || |||||||| || || | || | ||||||| ||| || | |
Sbjct 1883 GGCGTCAGCGAAACCCTGAACACCGATGCCCACGGGACGATGTCTCAAATTGGATTTCTT 1942
Query 79494 AGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTCCTGACTATTAC 79553
|| ||||| | |||||| | || ||||| || || || |||||||| || |
Sbjct 1943 TGCCTCTGGGAGGGGATAAAAGTTGATATCAATTATCTTGTTGAGATTTTTGGTAACCGT 2002
Query 79554 TTTGACCACATCCTTTAGTTTGAGAAAATCAAATCGTCCATC---TATTACAAACATGTT 79610
||| || ||||| ||||| | ||||||||| | || | | |||||||||||
Sbjct 2003 CTTGGTAACTTCCTTAAGTTTCTGGAAATCAAATTTTTTCTCGGGTGTGACAAACATGTT 2062
Query 79611 CAACGCGACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTAT 79670
| |||| |||||||| || || || || | ||||| | | ||||| | ||
Sbjct 2063 AAGAGCGATGGATGCCAGGTTGCACACTGCAATCTCATCCGGCGAGGAATATTCAACGAT 2122
Query 79671 TTCAGTGCAGAGGTTACTACACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTT 79730
||| ||||| | ||| || ||||||||||| || | || || || || || || ||||
Sbjct 2123 TTCTGTGCACAAGTTGCTGCACTTAATGGTGCCAACGTTCTGCTGGTTGCTTTTCCTGTT 2182
Query 79731 ACACGCATCCTTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGC 79790
|| |||||||| | || || |||| | |||||||| | ||| || || ||||| ||
Sbjct 2183 GCAGGCATCCTTGAAGAGCATATACGGGTTGCCAGTTTCCACCTGCGACTCAATAATGGC 2242
Query 79791 TTTCCAGACG-ACTCGAGCCTTTATTATAGACTTGTATCTCTTTTCTCTT--TCGTATT- 79846
||| | | ||| ||||||| | | || | | ||||| |||||||
Sbjct 2243 AAACCACAAGGACT-GAGCCTTGACCGTTCGGTTCG--CACGACCCTCTTGCTCGTATTT 2299
Query 79847 -GTGTATATAATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCA 79905
||||| | || ||||| || || ||||| ||||||| | || || |||| ||
Sbjct 2300 AGTGTACAGCTTC--TCGAATTCATCGCCCCAGACATCGTGCAGGCCCGGGCATTTGTGC 2357
Query 79906 GGACACATCAACGACCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATC 79965
|| ||||||| |||||| | ||| ||| || |||||||| |||||||| || |||
Sbjct 2358 GGGCACATCAGCGACCAATTCTCATTGGCCTCGACGCGTTTCATGAAGAGATCGGGTATC 2417
Query 79966 CAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGA 80025
||||| || ||| ||||| | || | || |||||| || || || || || || ||
Sbjct 2418 CAAAGGGCGTAAAACAGATCGCGGGCGCGATTCTCCTCCTTGCCAGTGTTTTTCTTGAGT 2477
Query 80026 TCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGT 80085
|| || ||| | | | ||| || ||||| || |||| ||| ||||| | | || ||
Sbjct 2478 TCCAGAAACTCAAAGACATCCGAGTGCCAGGGCTCCAGGTAAATGGCAAAGGCACCGGGA 2537
Query 80086 CGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGA 80145
|| ||| || |||||||| | || | || || || | || |||| ||| |||
Sbjct 2538 CGCTTGCCGCCACCCTGATCCACATAGCGTGCCACATTGTTGAAGACCCTCAGCATGGGA 2597
Query 80146 ATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTA 80205
| | |||||||| || ||||| || ||| | ||| || | || | || || || |
Sbjct 2598 ACTAGGCCATTGGAAGTGCCATTCGTGCCGCAAATAGAGGTGCCTTTTGCCCGGATGCAA 2657
Query 80206 CTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTA 80265
|| || || || || |||||| ||| ||||| | ||||| ||| | ||
Sbjct 2658 TGAACATTCAGTCCAATGCCACCTGCCGATTTCGAGATCATGGCGCAGTGTTCCACCGAT 2717
Query 80266 TCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGG 80325
| | |||||||||| || ||| | ||||| | | || |||||| ||||| ||
Sbjct 2718 TTAAAGATGCCCTCGATCGAGTCAGCCGTCATGGTCAAAAGGAAACAGGAAGACAGCTGC 2777
Query 80326 TGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAC 80385
| ||| | || | || ||| | || || || ||||| || || || ||||||
Sbjct 2778 GGGCGATTTGTGGCAGCGGCAAAAAGCGTTGGCGATGCGTGGGTGAAGAATCGCTCAGAC 2837
Query 80386 AGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCGACA 80445
| || ||||| || || | || | || |||||| | ||| ||||||| || ||
Sbjct 2838 AAAAGGTTGTAGGTTTCCACGGCCGCATCAATATCCTCTCCATGGATTCCTATTGCCACG 2897
Query 80446 CGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGAT 80505
||||| |||||||| || || | || ||||||| |||| | |||| || |||||
Sbjct 2898 CGCATCAACATGTGTTGCGGACGCTCGGCGATCTTTCCATTTCTCTTCAGCAGATAAGAA 2957
Query 80506 TTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATA 80562
||| | ||||| || |||||||||||||| ||| || || || ||||| |||
Sbjct 2958 CGTTCGAGGGTTTTGAATCCAAAATAGTTGTACCCAAAATCACGATCATAAATTATA 3014
>seq8501
Length=20033
Score = 439 bits (486), Expect = 4e-118
Identities = 1225/1861 (66%), Gaps = 24/1861 (1%)
Strand=Plus/Minus
Query 78718 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 78777
||||| ||||| | | || || || || || || || ||||||||||| || || ||
Sbjct 2792 GTGAACTGAATTGCATTGGCGGCTGGCTTTGTGCGCAGGTAGTACATTCCGGTCTTAAGT 2733
Query 78778 CCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 78837
|| |||| ||| || || || ||| | ||| ||| | || || || | |
Sbjct 2732 CCAGCTTTCCAAGAGTAAAAGTGAATGGACGTCAATTTTCCATAGTTTGGCTCAGCCACA 2673
Query 78838 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 78897
|| ||||| | || |||||||| || || || || || | || || |||||||| ||
Sbjct 2672 TGAATATTGAACGACTGACTTTGGTCTATAAACGCCCCACGATCAGCGGCCATTTTAATT 2613
Query 78898 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAAC-TCGCTTAATATCTTCTGGAAG 78956
| | ||| || |||||||| | |||||| |||| |||| | | ||| | | |
Sbjct 2612 GTGGACTTCACTGAGATTTCCCACACAGTTTTGTAAAGATCGCGAACTTTCTGGGGAATG 2553
Query 78957 GTTTGTATTC--TGAATGGATCCACCATCTGCCA-TAATCCTATTCTTGATCTCTTCATT 79013
|| | || | || ||||| || || ||| | | ||| ||||| || || ||||
Sbjct 2552 GTCTCAATACCTTGGATGGAGCC-CCTGCTGGAAATGATCTGGTTCTTCATGTCGTCATC 2494
Query 79014 CCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCC 79073
||| || | ||| ||||| | || | | ||| | || || || || ||||| ||
Sbjct 2493 CCACAAGTCGAGCTCAGTTAAGTCCCTCAACAAATGATGGTTGACCACCTGGAATTCACC 2434
Query 79074 AGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCGATTCATTATTTCC 79133
||||| |||| | || ||||| || ||||||| || || | ||||| || |||||
Sbjct 2433 AGACAGAACTCGTCTGGTATAAATGTTCGTGGTATAGGGCTCGAAAGATTCGTTGTTTCC 2374
Query 79134 CAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACC 79193
|| |||||||||||| || || || |||||||| || || | | || | | |||
Sbjct 2373 CATAATTTGAGCAGTAGACGCAGTAGGCATAGGGGCAACAAGCAGGGAGTTCCGGACACC 2314
Query 79194 GTATGATCTGATTTTATCTTTTAGAGATTCCCAATCCCAAAGATCAGACGGGACAACATT 79253
|| | |||| || ||||| || ||||||||| || | | || |
Sbjct 2313 GTGCTTTTTGATGGACTCCTTTAGTTTTTGCCAATCCCACAGGTTCGTTGGCTGTTTGTC 2254
Query 79254 CCAAAGATCATATTG-TAGAATACCGTTACTAGCGTA--TGATCCTGTGTATGTT-TCAT 79309
||| | || || || |||||| || || || || | | ||| || || ||||
Sbjct 2253 CCACATGTCGTACTGCTAGAATTCCTTTGCTCACGGGGCTTACCCTCA-TAGGTACTCAT 2195
Query 79310 AAGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGCTCCGTAATAAATGGTTT 79369
| || ||||| | || | |||||| || || || | || ||||| ||||| ||||
Sbjct 2194 AGGGACCTTCGACCTGCGCCAGTTCACAGCTGGCTTCCAGGGCACCGTAGTAAATCGTTT 2135
Query 79370 CGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTATCAAATGGATAATTTAAGAGAA 79429
| || |||| || ||| | | |||||| || ||| |||| | | |||||
Sbjct 2134 CAAATATCTGCTGATTCAAAAGACCGGCTTCTTCACTTTCATATGGGAATCGCATGAGAA 2075
Query 79430 TAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAAA 79489
| || ||||| || || || |||||||| || || | || | ||||||| ||| ||
Sbjct 2074 TCAAGGCGTCAGCGAAACCCTGAACACCGATGCCCACGGGACGATGTCTCAAATTGGATT 2015
Query 79490 TTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTCCTGACTA 79549
| | || ||||| | |||||| | || ||||| || || || |||||||| || |
Sbjct 2014 TCTTTGCCTCTGGGAGGGGATAAAAGTTGATATCAATTATCTTGTTGAGATTTTTGGTAA 1955
Query 79550 TTACTTTGACCACATCCTTTAGTTTGAGAAAATCAAATCGTCCATC---TATTACAAACA 79606
||| || ||||| ||||| | ||||||||| | || | | |||||||
Sbjct 1954 CCGTCTTGGTAACTTCCTTAAGTTTCTGGAAATCAAATTTTTTCTCGGGTGTGACAAACA 1895
Query 79607 TGTTCAACGCGACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTA 79666
|||| | |||| |||||||| || || || || | ||||| | | ||||| |
Sbjct 1894 TGTTAAGAGCGATGGATGCCAGGTTGCACACTGCAATCTCATCCGGCGAGGAATATTCAA 1835
Query 79667 TTATTTCAGTGCAGAGGTTACTACACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTT 79726
||||| ||||| | ||| || ||||||||||| || | || || || || || ||
Sbjct 1834 CGATTTCTGTGCACAAGTTGCTGCACTTAATGGTGCCAACGTTCTGCTGGTTGCTTTTCC 1775
Query 79727 TGTTACACGCATCCTTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAA 79786
|||| || |||||||| | || || |||| | |||||||| | ||| || || ||||
Sbjct 1774 TGTTGCAGGCATCCTTGAAGAGCATATACGGGTTGCCAGTTTCCACCTGCGACTCAATAA 1715
Query 79787 TCGCTTTCCAGACG-ACTCGAGCCTTTATTATAGACTTGTATCTCTTTTCTCTT--TCGT 79843
| || ||| | | ||| ||||||| | | || | | ||||| ||||
Sbjct 1714 TGGCAAACCACAAGGACT-GAGCCTTGACCGTTCGGTTCG--CACGACCCTCTTGCTCGT 1658
Query 79844 ATT--GTGTATATAATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTC 79901
||| ||||| | || ||||| || || ||||| ||||||| | || || ||||
Sbjct 1657 ATTTAGTGTACAGCTTC--TCGAATTCATCGCCCCAGACATCGTGCAGGCCCGGGCATTT 1600
Query 79902 GTCAGGACACATCAACGACCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGG 79961
|| || ||||||| |||||| | ||| ||| || |||||||| |||||||| ||
Sbjct 1599 GTGCGGGCACATCAGCGACCAATTCTCATTGGCCTCGACGCGTTTCATGAAGAGATCGGG 1540
Query 79962 AATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTT 80021
|||||||| || ||| ||||| | || | || |||||| || || || || ||| |
Sbjct 1539 TATCCAAAGGGCGTAAAACAGATCGCGGGCGCGATTCTCCTCCTTGCCAGTGTT-TTTCT 1481
Query 80022 AAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCC 80081
|| || || ||| | | | ||| || ||||| || |||| ||| ||||| | | ||
Sbjct 1480 GAGTTCCAGAAACTCAAAGACATCCGAGTGCCAGGGCTCCAGGTAAATGGCAAAGGCACC 1421
Query 80082 CGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACAT 80141
|| || ||| || |||||||| | || | || || || | || |||| |||
Sbjct 1420 GGGACGCTTGCCGCCACCCTGATCCACATAGCGTGCCACATTGTTGAAGACCCTCAGCAT 1361
Query 80142 TGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAAT 80201
|||| | |||||||| || ||||| || ||| | ||| || | || | || || ||
Sbjct 1360 GGGAACTAGGCCATTGGAAGTGCCATTCGTGCCGCAAATAGAGGTGCCTTTTGCCCGGAT 1301
Query 80202 ATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAA 80261
| || || || || || |||||| ||| ||||| | ||||| ||| |
Sbjct 1300 GCAATGAACATTCAGTCCAATGCCACCTGCCGATTTCGAGATCATGGCGCAGTGTTCCAC 1241
Query 80262 CGTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACAT 80321
|| | | |||||||||| || ||| | ||||| | | || |||||| |||||
Sbjct 1240 CGATTTAAAGATGCCCTCGATCGAGTCAGCCGTCATGGTCAAAAGGAAACAGGAAGACAG 1181
Query 80322 TTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTC 80381
|| | ||| | || | || ||| | || || || ||||| || || || ||
Sbjct 1180 CTGCGGGCGATTTGTGGCAGCGGCAAAAAGCGTTGGCGATGCGTGGGTGAAGAATCGCTC 1121
Query 80382 AGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGAATTCCTACCGC 80441
||||| || ||||| || || | || | || |||||| | ||| ||||||| ||
Sbjct 1120 AGACAAAAGGTTGTAGGTTTCCACGGCCGCATCAATATCCTCTCCATGGATTCCTATTGC 1061
Query 80442 GACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTA 80501
|| ||||| |||||||| || || | || ||||||| |||| | |||| || ||
Sbjct 1060 CACGCGCATCAACATGTGTTGCGGACGCTCGGCGATCTTTCCATTTCTCTTCAGCAGATA 1001
Query 80502 AGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAAT 80561
||| ||| | ||||| || |||||||||||||| ||| || || || ||||| ||
Sbjct 1000 AGAACGTTCGAGGGTTTTGAATCCAAAATAGTTGTACCCAAAATCACGATCATAAATTAT 941
Query 80562 A 80562
|
Sbjct 940 A 940
>seq22136
Length=515022
Score = 159 bits (176), Expect = 5e-34
Identities = 470/720 (65%), Gaps = 7/720 (1%)
Strand=Plus/Plus
Query 49672 TGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTTCC 49731
||||| || ||||| || ||||| || || || || || |||| || || | |||
Sbjct 289634 TGGTACTCGCCCACCTTCTTCTCGAAGAAGTTGGTCTTGCCGTCCAGGGAGATCATCTCC 289693
Query 49732 ATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATCAAT 49791
||||| | ||||| || | || || || ||| || |||||||| | |||
Sbjct 289694 ATGAAGTTGAACGGGTTCTTGGTGTTGTAGATCTTTCCAACGCCCAATTCCACCAGCAAA 289753
Query 49792 CTATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTTA 49851
| ||||| || || || || || ||| | || || ||||| || ||||| ||
Sbjct 289754 CGGTCCGCCACGAACTCAATGTACTGCGACATGAGGTCGCAGTTCATGCCAATAAGGTTT 289813
Query 49852 ACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAATAGAT 49911
|| || || || | || || || || || ||||||| |||||||| || ||
Sbjct 289814 ACGGGCAGGGCATCGGTGAGGAACTCCTGCTCAATGGCCACCGCATCACGGATGATCTCG 289873
Query 49912 CTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGAAATCG 49971
| | | || || ||| | || | | ||| | ||||||| ||||| ||
Sbjct 289874 ATGATGCGCTCGCGCCTGGGTCGCTGAACCAGATGCTGGAACATCAGCACGGCGAAGTCA 289933
Query 49972 CAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGG 50031
||||||| |||||||| | || ||||||||||| || || || || ||||| |
Sbjct 289934 CAGTGCAATCCCTCGTCCCGGGAGATCAGTTCGTTGGAGAAGGTCAGGCCCGGCATCAAA 289993
Query 50032 CCACGCTTTTTAAGCCAAAATATGGA--CGCAAATGACCCAGAAAAGAAGATTCCTTCTA 50089
|| || || || ||||| || ||||| || || || | | | |||||||| || || |
Sbjct 289994 CCGCGTTTCTTTAGCCAGAAAATGGAGGCGAAACTGCCGCTG--AAGAAGATGCCCTCCA 290051
Query 50090 CTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCG--CTGTCATG-TATCCACTTTT 50146
| ||||||||||| | | | ||| || || ||||| || | | |||||
Sbjct 290052 CGGCGGCAAAGGCGATGATGCGCTCCCCGAAATTGGCGGACTTGGAGGAGATCCAGGACA 290111
Query 50147 GAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGt 50206
| ||||| || ||||| || || |||||||| || ||||| || || |||||||
Sbjct 290112 GGGCCCAGTCCGCCTTGCGCTTCACCGCTGGCATCGTCTCGATGGCGTTGAACAGATAGT 290171
Query 50207 ttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAA 50266
| | | ||| | ||||| ||||||| | || ||||| ||||| || |
Sbjct 290172 CTCGCTGGTGCGGATCCCGGATGTAAGTGTCGATCAGCACGCTGTACATCTCCGAGTGCA 290231
Query 50267 TGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTG 50326
||| || ||||| ||||| ||||||||||| || | ||||| || |||||||| ||
Sbjct 290232 CGTTCTCCATGGCGATCTGGAATCCGTAGAAGCAGCGGGCCTCCGTGATCTGCACCTCCT 290291
Query 50327 TACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCA 50386
|| || || || | | || ||||| || || || || ||| || || || ||||
Sbjct 290292 GACTGAAGCGCTCCACGAGGTTCTCATTAACAATGCCATCGGAGGCGGCGAAGAAGGCCA 290351
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718063922803160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |