Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20rhopaloa_20[refseq_20GCF_5F000236305.1_202013-02-22]
22,819 sequences; 197,375,704 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq8502 398 1e-105
seq1813 398 1e-105
seq8501 392 4e-104
>seq8502
Length=4749
Score = 398 bits (440), Expect = 1e-105
Identities = 1228/1889 (65%), Gaps = 31/1889 (2%)
Strand=Plus/Plus
Query 70784 TTTTTTCCTTGTCCAATGTAAACTGAATGGGAGAGGATGC-GGCTTTCGTACGTAGATAG 70842
||| || ||| || | || |||||||| | | || || |||||| || || || |||
Sbjct 1147 TTTGTTTCTTATCTACGGTGAACTGAATTGCATTGGCGGCTGGCTTT-GTGCGCAGGTAG 1205
Query 70843 TACATGCCTGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAA 70902
||||| || || || || || |||| |||||| || || ||| | ||| |
Sbjct 1206 TACATTCCGGTCTTAAGTCCAGCTTTCCAAGAGTAAAAGTGAATGGACGTCAATTTTCCA 1265
Query 70903 TAGCTAGGATCGGCTATGTGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTG 70962
||| | || || || | |||||||| | |||||||||||| || || || || || |
Sbjct 1266 TAGTTTGGCTCAGCCACATGAATATTGAACGACTGACTTTGGTCTATAAACGCCCCACGA 1325
Query 70963 TCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAAC-TCG 71021
|| || |||||||| || | | ||| || |||||||| | |||||| |||| |||
Sbjct 1326 TCAGCGGCCATTTTAATTGTGGACTTCACTGAGATTTCCCACACAGTTTTGTAAAGATCG 1385
Query 71022 CTTAATATCTTCTGGAAGGTTTGTATTC--TGAATGGATCCACCATCTGCAA-TAATCCT 71078
| | | ||| | | ||| | || | || ||||| || || ||| || | |||
Sbjct 1386 CGAACTTTCTGGGGAATGGTCTCAATACCTTGGATGGAGCC-CCTGCTGGAAATGATCTG 1444
Query 71079 ATTTTTGATCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATT 71138
|| || || || |||| ||| || | ||| ||||| | || | | |||| | ||
Sbjct 1445 GTTCTTCATGTCGTCATCCCACAAGTCGAGCTCAGTTAAGTCCCTCAACAAATGATGGTT 1504
Query 71139 AACTACTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTC 71198
|| || || ||||| ||||||| |||| | || ||||| || ||||||| || ||
Sbjct 1505 GACCACCTGGAATTCACCAGACAGAACTCGTCTGGTATAAATGTTCGTGGTATAGGGCTC 1564
Query 71199 CACTGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAA 71258
| || || || ||||||| |||||||||||| || ||||| |||||||| || || |
Sbjct 1565 GAAAGATTCGTTGTTTCCCATAATTTGAGCAGTAGACGCAGTAGGCATAGGGGCAACAAG 1624
Query 71259 TAGACTATTTCTAAGACCATGTGATCGGATTTTATCTTTTAGAGATTCCCAATTCCAAAG 71318
|| || | | ||| || | ||| || ||||| || ||||| ||| ||
Sbjct 1625 CAGGGAGTTCCGGACACCGTGCTTTTTGATGGACTCCTTTAGTTTTTGCCAATCCCACAG 1684
Query 71319 ATCCGATGGTACAACNNNNNNNNNNNNNNNNNNNNNNATGCCGTTACTAGCGTATGATCC 71378
| || ||| || || || || || |||
Sbjct 1685 GTTCGTTGGCTGTTTGTCCCACATGTCGTACTGCAGAATTCCTTTGCTCACGGGGCTTCC 1744
Query 71379 TGCATATGTATCGTATGGTCCTTCTTTTTCGGCTAGTTCACAACTCGCCTCTAATGCTCC 71438
|||| || || || || ||||| | || |||||||| || || || | || ||
Sbjct 1745 CTCATAGGTCTCATAGGGACCTTCGACCTGCGCCAGTTCACAGCTGGCTTCCAGGGCACC 1804
Query 71439 ATAATAAATGGTTTCGAAAATCTTCTTATTGA----GATCTTGTGCTTCCGGGCTATCAA 71494
|| ||||| ||||| || |||| || ||| | || | | |||| || |||
Sbjct 1805 GTAGTAAATCGTTTCAAATATCTGCTGATTCAAAAAGACCGGCTTCTTCA---CTTTCAT 1861
Query 71495 ATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACGCCAATACCGATAGGTC 71554
|||| | | |||||| || ||||| || || || ||||| || || || | || |
Sbjct 1862 ATGGGAATCGCATGAGAATCAAGGCGTCAGCGAAACCCTGAACACCGATGCCCACGGGAC 1921
Query 71555 TGTGTCTCTTATTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTT 71614
|||||| ||| || | | || ||||| | |||||| | || ||||| || || |
Sbjct 1922 GATGTCTCAAATTGGATTTCTTTGCCTCTGGGAGGGGATAAAAGTTGATATCAATTATCT 1981
Query 71615 TATTGAGATTTCTGACTATTACTTTGACCACATCCTTTAGTTTGAGAAAATCAAATCTCC 71674
| ||||||||| || | ||| || ||||| ||||| | ||||||||| |
Sbjct 1982 TGTTGAGATTTTTGGTAACCGTCTTGGTAACTTCCTTAAGTTTCTGGAAATCAAATTTTT 2041
Query 71675 CATC---TATTACAAACACGTTCAAGGCAACAGATGCCAGATTACAAACGGCTACCTCAT 71731
|| | | ||||||| ||| | || | |||||||| || || || || | |||||
Sbjct 2042 TCTCGGGTGTGACAAACATGTTAAGAGCGATGGATGCCAGGTTGCACACTGCAATCTCAT 2101
Query 71732 TAGCATCGGCATATTGTATAATTTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAAT 71791
| || ||||| | ||||| ||||| | || || ||||| ||||| || | |
Sbjct 2102 CCGGCGAGGAATATTCAACGATTTCTGTGCACAAGTTGCTGCACTTAATGGTGCCAACGT 2161
Query 71792 TTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATAAACGGAGTACCAGTTT 71851
| || || || || || |||| || |||||||| | || ||| |||| | |||||||
Sbjct 2162 TCTGCTGGTTGCTTTTCCTGTTGCAGGCATCCTTGAAGAGCATATACGGGTTGCCAGTTT 2221
Query 71852 CAATCTGAGATTCTATAATCGCTTTCCAGACG-ACTCGAGCCTTTATTATATTCTTGTAT 71910
| | ||| || || ||||| || ||| | | ||| ||||||| | | || |
Sbjct 2222 CCACCTGCGACTCAATAATGGCAAACCACAAGGACT-GAGCCTTGACCGT--TCGGTTCG 2278
Query 71911 CTCTTTTCTCTT--TCGTATT--GTGTATATAATCGTTCGAACTCGTCTCCCCAAGCATT 71966
| | ||||| ||||||| ||||| | || ||||| || || ||||| |||
Sbjct 2279 CACGACCCTCTTGCTCGTATTTAGTGTACAGCTTC--TCGAATTCATCGCCCCAGACATC 2336
Query 71967 GTCTAATCCAGGACATTCATTCGGACACATCAATGACCACTCTCCATCATCATTTACTCG 72026
|| | || || |||| | ||| ||||||| ||||| | ||| | | || ||
Sbjct 2337 GTGCAGGCCCGGGCATTTGTGCGGGCACATCAGCGACCAATTCTCATTGGCCTCGACGCG 2396
Query 72027 TTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTC 72086
|||||| |||||||| || |||||||| || ||| ||||| | || | || ||||||
Sbjct 2397 TTTCATGAAGAGATCGGGTATCCAAAGGGCGTAAAACAGATCGCGGGCGCGATTCTCCTC 2456
Query 72087 GTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAA 72146
|| || || || || || || || || ||| | | | ||| || ||||| || ||||
Sbjct 2457 CTTGCCAGTGTTTTTCTTGAGTTCCAGAAACTCAAAGACATCCGAGTGCCAGGGCTCCAG 2516
Query 72147 GTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTT 72206
||| ||||| | | || || || ||| || |||||||| | || | || ||
Sbjct 2517 GTAAATGGCAAAGGCACCGGGACGCTTGCCGCCACCCTGATCCACATAGCGTGCCACATT 2576
Query 72207 ATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATA 72266
|| | || |||| ||| |||| | |||||||| | ||||| || ||| | ||| |
Sbjct 2577 GTTGAAGACCCTCAGCATGGGAACTAGGCCATTGGAAGTGCCATTCGTGCCGCAAATAGA 2636
Query 72267 GCTTCCACTGGCACGAAT--ATTGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAG 72324
| | || | || || || | || ||| | | || || || |||||| ||| |||
Sbjct 2637 GGTGCCTTTTGCCCGGATGCAATGAACATTCA--GTCCAATGCCACCTGCCGATTTCGAG 2694
Query 72325 ATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTA 72384
|| | ||||| ||| | || | | |||||||||| || ||| || ||||| |
Sbjct 2695 ATCATGGCGCAGTGTTCCACCGATTTAAAGATGCCCTCGATCGAGTCAGCCGTCATGGTC 2754
Query 72385 AGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAA 72444
| || |||||| ||||| || | ||| | || | || ||| | || || ||
Sbjct 2755 AAAAGGAAACAGGAAGACAGCTGCGGGCGATTTGTGGCAGCGGCAAAAAGCGTTGGCGAT 2814
Query 72445 GCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCC 72504
||||| || || || ||||||| || ||||| || || | || | || ||||||
Sbjct 2815 GCGTGGGTGAAGAATCGCTCAGACAAAAGGTTGTAGGTTTCCACGGCCGCATCAATATCC 2874
Query 72505 CATTGATGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTG 72564
| ||| ||||||| || || ||||| ||||| || || || | || |||||||
Sbjct 2875 TCTCCATGGATTCCTATTGCCACGCGCATCAACATGTGTTGCGGACGCTCGGCGATCTTT 2934
Query 72565 TTATTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAA 72624
|||| | |||| || || || ||| | ||||| || |||||||||||||| |
Sbjct 2935 CCATTTCTCTTCAGCAGATAAGAACGTTCGAGGGTTTTGAATCCAAAATAGTTGTACCCA 2994
Query 72625 AAGTCTCGTTCGTAAATAATAACCGAATT 72653
|| || || || ||||| ||| |||||
Sbjct 2995 AAATCACGATCATAAATTATAGAGGAATT 3023
>seq1813
Length=4749
Score = 398 bits (440), Expect = 1e-105
Identities = 1225/1885 (65%), Gaps = 24/1885 (1%)
Strand=Plus/Plus
Query 70784 TTTTTTCCTTGTCCAATGTAAACTGAATGGGAGAGGATGC-GGCTTTCGTACGTAGATAG 70842
||| || ||| || | || |||||||| | | || || |||||| || || || |||
Sbjct 1147 TTTGTTTCTTATCTACGGTGAACTGAATTGCATTGGCGGCTGGCTTT-GTGCGCAGGTAG 1205
Query 70843 TACATGCCTGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAA 70902
||||| || || || || || |||| |||||| || || ||| | ||| |
Sbjct 1206 TACATTCCGGTCTTAAGTCCAGCTTTCCAAGAGTAAAAGTGAATGGACGTCAATTTTCCA 1265
Query 70903 TAGCTAGGATCGGCTATGTGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTG 70962
||| | || || || | |||||||| | |||||||||||| || || || || || |
Sbjct 1266 TAGTTTGGCTCAGCCACATGAATATTGAACGACTGACTTTGGTCTATAAACGCCCCACGA 1325
Query 70963 TCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAAC-TCG 71021
|| || |||||||| || | | ||| || |||||||| | |||||| |||| |||
Sbjct 1326 TCAGCGGCCATTTTAATTGTGGACTTCACTGAGATTTCCCACACAGTTTTGTAAAGATCG 1385
Query 71022 CTTAATATCTTCTGGAAGGTTTGTATTC--TGAATGGATCCACCATCTGCAA-TAATCCT 71078
| | | ||| | | ||| | || | || ||||| || || ||| || | |||
Sbjct 1386 CGAACTTTCTGGGGAATGGTCTCAATACCTTGGATGGAGCC-CCTGCTGGAAATGATCTG 1444
Query 71079 ATTTTTGATCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATT 71138
|| || || || |||| ||| || | ||| ||||| | || | | |||| | ||
Sbjct 1445 GTTCTTCATGTCGTCATCCCACAAGTCGAGCTCAGTTAAGTCCCTCAACAAATGATGGTT 1504
Query 71139 AACTACTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTC 71198
|| || || ||||| ||||||| |||| | || ||||| || ||||||| || ||
Sbjct 1505 GACCACCTGGAATTCACCAGACAGAACTCGTCTGGTATAAATGTTCGTGGTATAGGGCTC 1564
Query 71199 CACTGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAA 71258
| || || || ||||||| |||||||||||| || ||||| |||||||| || || |
Sbjct 1565 GAAAGATTCGTTGTTTCCCATAATTTGAGCAGTAGACGCAGTAGGCATAGGGGCAACAAG 1624
Query 71259 TAGACTATTTCTAAGACCATGTGATCGGATTTTATCTTTTAGAGATTCCCAATTCCAAAG 71318
|| || | | ||| || | ||| || ||||| || ||||| ||| ||
Sbjct 1625 CAGGGAGTTCCGGACACCGTGCTTTTTGATGGACTCCTTTAGTTTTTGCCAATCCCACAG 1684
Query 71319 ATCCGATGGTACAACNNNNNNNNNNNNNNNNNNNNNNATGCCGTTACTAGCGTATGATCC 71378
| || ||| || || || || || |||
Sbjct 1685 GTTCGTTGGCTGTTTGTCCCACATGTCGTACTGCAGAATTCCTTTGCTCACGGGGCTTCC 1744
Query 71379 TGCATATGTATCGTATGGTCCTTCTTTTTCGGCTAGTTCACAACTCGCCTCTAATGCTCC 71438
|||| || || || || ||||| | || |||||||| || || || | || ||
Sbjct 1745 CTCATAGGTCTCATAGGGACCTTCGACCTGCGCCAGTTCACAGCTGGCTTCCAGGGCACC 1804
Query 71439 ATAATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCCGGGCTATCAAATGG 71498
|| ||||| ||||| || |||| || ||| | | || || || ||| ||||
Sbjct 1805 GTAGTAAATCGTTTCAAATATCTGCTGATTCAAAAGACCGGCCTCTTCACTTTCATATGG 1864
Query 71499 ATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACGCCAATACCGATAGGTCTGTG 71558
| | |||||| || ||||| || || || ||||| || || || | || | ||
Sbjct 1865 GAATCGCATGAGAATCAAGGCGTCAGCGAAACCCTGAACACCGATGCCCACGGGACGATG 1924
Query 71559 TCTCTTATTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATT 71618
|||| ||| || | | || ||||| | |||||| | || ||||| || || || ||
Sbjct 1925 TCTCAAATTGGATTTCTTTGCCTCTGGGAGGGGATAAAAGTTGATATCAATTATCTTGTT 1984
Query 71619 GAGATTTCTGACTATTACTTTGACCACATCCTTTAGTTTGAGAAAATCAAATCTCCCATC 71678
||||||| || | ||| || ||||| ||||| | ||||||||| | ||
Sbjct 1985 GAGATTTTTGGTAACCGTCTTGGTAACTTCCTTAAGTTTCTGGAAATCAAATTTTTTCTC 2044
Query 71679 ---TATTACAAACACGTTCAAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGC 71735
| | ||||||| ||| | || | |||||||| || || || || | ||||| |
Sbjct 2045 GGGTGTGACAAACATGTTAAGAGCGATGGATGCCAGGTTGCACACTGCAATCTCATCCGG 2104
Query 71736 ATCGGCATATTGTATAATTTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTG 71795
|| ||||| | ||||| ||||| | || || ||||| ||||| || | || ||
Sbjct 2105 CGAGGAATATTCAACGATTTCTGTGCACAAGTTGCTGCACTTAATGGTGCCAACGTTCTG 2164
Query 71796 TTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATAAACGGAGTACCAGTTTCAAT 71855
|| || || || |||| || |||||||| | || ||| |||| | |||||||| |
Sbjct 2165 CTGGTTGCTTTTCCTGTTGCAGGCATCCTTGAAGAGCATATACGGGTTGCCAGTTTCCAC 2224
Query 71856 CTGAGATTCTATAATCGCTTTCCAGACG-ACTCGAGCCTTTATTATATTCTTGTATCTCT 71914
||| || || ||||| || ||| | | ||| ||||||| | | || | | |
Sbjct 2225 CTGCGACTCAATAATGGCAAACCACAAGGACT-GAGCCTTGACCGT--TCGGTTCGCACG 2281
Query 71915 TTTCTCTT--TCGTATT--GTGTATATAATCGTTCGAACTCGTCTCCCCAAGCATTGTCT 71970
||||| ||||||| ||||| | || ||||| || || ||||| ||| ||
Sbjct 2282 ACCCTCTTGCTCGTATTTAGTGTACAGCTTC--TCGAATTCATCGCCCCAGACATCGTGC 2339
Query 71971 AATCCAGGACATTCATTCGGACACATCAATGACCACTCTCCATCATCATTTACTCGTTTC 72030
| || || |||| | ||| ||||||| ||||| | ||| | | || ||||||
Sbjct 2340 AGGCCCGGGCATTTGTGCGGGCACATCAGCGACCAATTCTCATTGGCCTCGACGCGTTTC 2399
Query 72031 ATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTT 72090
|| |||||||| || |||||||| || ||| ||||| | || | || |||||| ||
Sbjct 2400 ATGAAGAGATCGGGTATCCAAAGGGCGTAAAACAGATCGCGGGCGCGATTCTCCTCCTTG 2459
Query 72091 CCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTAT 72150
|| || || || || || || || ||| | | | ||| || ||||| || |||| |||
Sbjct 2460 CCAGTGTTTTTCTTGAGTTCCAGAAACTCAAAGACATCCGAGTGCCAGGGCTCCAGGTAA 2519
Query 72151 ATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTA 72210
||||| | | || || || ||| || |||||||| | || | || || ||
Sbjct 2520 ATGGCAAAGGCACCGGGACGCTTGCCGCCACCCTGATCCACATAGCGTGCCACATTGTTG 2579
Query 72211 TAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTT 72270
| || |||| ||| |||| | |||||||| | ||||| || ||| | ||| || |
Sbjct 2580 AAGACCCTCAGCATGGGAACTAGGCCATTGGAAGTGCCATTCGTGCCGCAAATAGAGGTG 2639
Query 72271 CCACTGGCACGAAT--ATTGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTA 72328
|| | || || || | || ||| | | || || || |||||| ||| ||||| |
Sbjct 2640 CCTTTTGCCCGGATGCAATGAACATTCA--GTCCAATGCCACCTGCCGATTTCGAGATCA 2697
Query 72329 ATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTA 72388
||||| ||| | || | | |||||||||| || ||| || ||||| | | |
Sbjct 2698 TGGCGCAGTGTTCCACCGATTTAAAGATGCCCTCGATCGAGTCAGCCGTCATGGTCAAAA 2757
Query 72389 GAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGT 72448
| |||||| ||||| || | ||| | || | || ||| | || || || ||||
Sbjct 2758 GGAAACAGGAAGACAGCTGCGGGCGATTTGTGGCAGCGGCAAAAAGCGTTGGCGATGCGT 2817
Query 72449 GCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATT 72508
| || || || ||||||| || ||||| || || | || | || |||||| |
Sbjct 2818 GGGTGAAGAATCGCTCAGACAAAAGGTTGTAGGTTTCCACGGCCGCATCAATATCCTCTC 2877
Query 72509 GATGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTAT 72568
||| ||||||| || || ||||| ||||| || || || | || ||||||| ||
Sbjct 2878 CATGGATTCCTATTGCCACGCGCATCAACATGTGTTGCGGACGCTCGGCGATCTTTCCAT 2937
Query 72569 TTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGT 72628
|| | |||| || || || ||| | ||||| || |||||||||||||| ||| |
Sbjct 2938 TTCTCTTCAGCAGATAAGAACGTTCGAGGGTTTTGAATCCAAAATAGTTGTACCCAAAAT 2997
Query 72629 CTCGTTCGTAAATAATAACCGAATT 72653
| || || ||||| ||| |||||
Sbjct 2998 CACGATCATAAATTATAGAGGAATT 3022
>seq8501
Length=20033
Score = 392 bits (434), Expect = 4e-104
Identities = 1230/1889 (65%), Gaps = 30/1889 (2%)
Strand=Plus/Minus
Query 70784 TTTTTTCCTTGTCCAATGTAAACTGAATGGGAGAGGATGC-GGCTTTCGTACGTAGATAG 70842
||| || ||| || | || |||||||| | | || || |||||| || || || |||
Sbjct 2809 TTTGTTTCTTATCTACGGTGAACTGAATTGCATTGGCGGCTGGCTTT-GTGCGCAGGTAG 2751
Query 70843 TACATGCCTGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAA 70902
||||| || || || || || |||| |||||| || || ||| | ||| |
Sbjct 2750 TACATTCCGGTCTTAAGTCCAGCTTTCCAAGAGTAAAAGTGAATGGACGTCAATTTTCCA 2691
Query 70903 TAGCTAGGATCGGCTATGTGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTG 70962
||| | || || || | |||||||| | |||||||||||| || || || || || |
Sbjct 2690 TAGTTTGGCTCAGCCACATGAATATTGAACGACTGACTTTGGTCTATAAACGCCCCACGA 2631
Query 70963 TCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAAC-TCG 71021
|| || |||||||| || | | ||| || |||||||| | |||||| |||| |||
Sbjct 2630 TCAGCGGCCATTTTAATTGTGGACTTCACTGAGATTTCCCACACAGTTTTGTAAAGATCG 2571
Query 71022 CTTAATATCTTCTGGAAGGTTTGTATTC--TGAATGGATCCACCATCTGCAA-TAATCCT 71078
| | | ||| | | ||| | || | || ||||| || || ||| || | |||
Sbjct 2570 CGAACTTTCTGGGGAATGGTCTCAATACCTTGGATGGAGCC-CCTGCTGGAAATGATCTG 2512
Query 71079 ATTTTTGATCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATT 71138
|| || || || |||| ||| || | ||| ||||| | || | | |||| | ||
Sbjct 2511 GTTCTTCATGTCGTCATCCCACAAGTCGAGCTCAGTTAAGTCCCTCAACAAATGATGGTT 2452
Query 71139 AACTACTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTC 71198
|| || || ||||| ||||||| |||| | || ||||| || ||||||| || ||
Sbjct 2451 GACCACCTGGAATTCACCAGACAGAACTCGTCTGGTATAAATGTTCGTGGTATAGGGCTC 2392
Query 71199 CACTGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAA 71258
| || || || ||||||| |||||||||||| || ||||| |||||||| || || |
Sbjct 2391 GAAAGATTCGTTGTTTCCCATAATTTGAGCAGTAGACGCAGTAGGCATAGGGGCAACAAG 2332
Query 71259 TAGACTATTTCTAAGACCATGTGATCGGATTTTATCTTTTAGAGATTCCCAATTCCAAAG 71318
|| || | | ||| || | ||| || ||||| || ||||| ||| ||
Sbjct 2331 CAGGGAGTTCCGGACACCGTGCTTTTTGATGGACTCCTTTAGTTTTTGCCAATCCCACAG 2272
Query 71319 ATCCGATGG-TACAACNNNNNNNNNNNNNNNNNNNNNNATGCCGTTACTAGCGTA--TGA 71375
| || ||| | || || || || || | |
Sbjct 2271 GTTCGTTGGCTGTTTGTCCCACATGTCGTACTGCTAGAATTCCTTTGCTCACGGGGCTTA 2212
Query 71376 TCCTGCATATGTA-TCGTATGGTCCTTCTTTTTCGGCTAGTTCACAACTCGCCTCTAATG 71434
||| |||| ||| || || || ||||| | || |||||||| || || || | |
Sbjct 2211 CCCT-CATAGGTACTCATAGGGACCTTCGACCTGCGCCAGTTCACAGCTGGCTTCCAGGG 2153
Query 71435 CTCCATAATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCCGGGCTATCAA 71494
| || || ||||| ||||| || |||| || ||| | | ||||| || |||
Sbjct 2152 CACCGTAGTAAATCGTTTCAAATATCTGCTGATTCAAAAGACCGGCTTCTTCACTTTCAT 2093
Query 71495 ATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACGCCAATACCGATAGGTC 71554
|||| | | |||||| || ||||| || || || ||||| || || || | || |
Sbjct 2092 ATGGGAATCGCATGAGAATCAAGGCGTCAGCGAAACCCTGAACACCGATGCCCACGGGAC 2033
Query 71555 TGTGTCTCTTATTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTT 71614
|||||| ||| || | | || ||||| | |||||| | || ||||| || || |
Sbjct 2032 GATGTCTCAAATTGGATTTCTTTGCCTCTGGGAGGGGATAAAAGTTGATATCAATTATCT 1973
Query 71615 TATTGAGATTTCTGACTATTACTTTGACCACATCCTTTAGTTTGAGAAAATCAAATCTCC 71674
| ||||||||| || | ||| || ||||| ||||| | ||||||||| |
Sbjct 1972 TGTTGAGATTTTTGGTAACCGTCTTGGTAACTTCCTTAAGTTTCTGGAAATCAAATTTTT 1913
Query 71675 CATC---TATTACAAACACGTTCAAGGCAACAGATGCCAGATTACAAACGGCTACCTCAT 71731
|| | | ||||||| ||| | || | |||||||| || || || || | |||||
Sbjct 1912 TCTCGGGTGTGACAAACATGTTAAGAGCGATGGATGCCAGGTTGCACACTGCAATCTCAT 1853
Query 71732 TAGCATCGGCATATTGTATAATTTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAAT 71791
| || ||||| | ||||| ||||| | || || ||||| ||||| || | |
Sbjct 1852 CCGGCGAGGAATATTCAACGATTTCTGTGCACAAGTTGCTGCACTTAATGGTGCCAACGT 1793
Query 71792 TTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATAAACGGAGTACCAGTTT 71851
| || || || || || |||| || |||||||| | || ||| |||| | |||||||
Sbjct 1792 TCTGCTGGTTGCTTTTCCTGTTGCAGGCATCCTTGAAGAGCATATACGGGTTGCCAGTTT 1733
Query 71852 CAATCTGAGATTCTATAATCGCTTTCCAGACG-ACTCGAGCCTTTATTATATTCTTGTAT 71910
| | ||| || || ||||| || ||| | | ||| ||||||| | | || |
Sbjct 1732 CCACCTGCGACTCAATAATGGCAAACCACAAGGACT-GAGCCTTGACCGT--TCGGTTCG 1676
Query 71911 CTCTTTTCTCTT--TCGTATT--GTGTATATAATCGTTCGAACTCGTCTCCCCAAGCATT 71966
| | ||||| ||||||| ||||| | || ||||| || || ||||| |||
Sbjct 1675 CACGACCCTCTTGCTCGTATTTAGTGTACAGCTTC--TCGAATTCATCGCCCCAGACATC 1618
Query 71967 GTCTAATCCAGGACATTCATTCGGACACATCAATGACCACTCTCCATCATCATTTACTCG 72026
|| | || || |||| | ||| ||||||| ||||| | ||| | | || ||
Sbjct 1617 GTGCAGGCCCGGGCATTTGTGCGGGCACATCAGCGACCAATTCTCATTGGCCTCGACGCG 1558
Query 72027 TTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTC 72086
|||||| |||||||| || |||||||| || ||| ||||| | || | || ||||||
Sbjct 1557 TTTCATGAAGAGATCGGGTATCCAAAGGGCGTAAAACAGATCGCGGGCGCGATTCTCCTC 1498
Query 72087 GTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAA 72146
|| || || || ||| | || || || ||| | | | ||| || ||||| || ||||
Sbjct 1497 CTTGCCAGTGTT-TTTCTGAGTTCCAGAAACTCAAAGACATCCGAGTGCCAGGGCTCCAG 1439
Query 72147 GTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTT 72206
||| ||||| | | || || || ||| || |||||||| | || | || ||
Sbjct 1438 GTAAATGGCAAAGGCACCGGGACGCTTGCCGCCACCCTGATCCACATAGCGTGCCACATT 1379
Query 72207 ATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATA 72266
|| | || |||| ||| |||| | |||||||| | ||||| || ||| | ||| |
Sbjct 1378 GTTGAAGACCCTCAGCATGGGAACTAGGCCATTGGAAGTGCCATTCGTGCCGCAAATAGA 1319
Query 72267 GCTTCCACTGGCACGAAT--ATTGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAG 72324
| | || | || || || | || ||| | | || || || |||||| ||| |||
Sbjct 1318 GGTGCCTTTTGCCCGGATGCAATGAACATTCA--GTCCAATGCCACCTGCCGATTTCGAG 1261
Query 72325 ATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTA 72384
|| | ||||| ||| | || | | |||||||||| || ||| || ||||| |
Sbjct 1260 ATCATGGCGCAGTGTTCCACCGATTTAAAGATGCCCTCGATCGAGTCAGCCGTCATGGTC 1201
Query 72385 AGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAA 72444
| || |||||| ||||| || | ||| | || | || ||| | || || ||
Sbjct 1200 AAAAGGAAACAGGAAGACAGCTGCGGGCGATTTGTGGCAGCGGCAAAAAGCGTTGGCGAT 1141
Query 72445 GCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCC 72504
||||| || || || ||||||| || ||||| || || | || | || ||||||
Sbjct 1140 GCGTGGGTGAAGAATCGCTCAGACAAAAGGTTGTAGGTTTCCACGGCCGCATCAATATCC 1081
Query 72505 CATTGATGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTG 72564
| ||| ||||||| || || ||||| ||||| || || || | || |||||||
Sbjct 1080 TCTCCATGGATTCCTATTGCCACGCGCATCAACATGTGTTGCGGACGCTCGGCGATCTTT 1021
Query 72565 TTATTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAA 72624
|||| | |||| || || || ||| | ||||| || |||||||||||||| |
Sbjct 1020 CCATTTCTCTTCAGCAGATAAGAACGTTCGAGGGTTTTGAATCCAAAATAGTTGTACCCA 961
Query 72625 AAGTCTCGTTCGTAAATAATAACCGAATT 72653
|| || || || ||||| ||| |||||
Sbjct 960 AAATCACGATCATAAATTATAGAGGAATT 932
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 670947765932440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |