Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20rhopaloa_20[refseq_20GCF_5F000236305.1_202013-02-22] 22,819 sequences; 197,375,704 total letters Query= NC_005946.1 Length=105903 Score E Sequences producing significant alignments: (Bits) Value seq22465 96.9 2e-15 >seq22465 Length=63631 Score = 96.9 bits (106), Expect = 2e-15 Identities = 115/156 (74%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 75023 GGCCCTGGTAAAGACAGACCTGGCCGTTAAGATGCCCCCGGGCCTCTACGGCAGGGTGGC 75082 |||| | || ||||| |||||| || || | || |||| ||||||| | ||||| Sbjct 17194 GGCCATCGTGAAGACCGACCTGCAGGTGCAGGTTCCGGAGGGCTCCTACGGCCGTGTGGC 17253 Query 75083 TCCCAGGTCCGGCCTGGCCCTGAAAAAATTTATAGACGTCGGTGCCGGGGTGGTGGACCC 75142 || ||||||| |||||| |||| || || || || || || ||||| |||||||| Sbjct 17254 CCCACGGTCCGGACTGGCCGTGAAGAACTTCATCGATGTGGGCGCCGGTGTGGTGGATGA 17313 Query 75143 CGACTACAGGGGCAACCTCGGCGTCATACTGTTTAA 75178 || ||| | ||||||||||||||| | ||||| || Sbjct 17314 GGATTACCGCGGCAACCTCGGCGTCGTTCTGTTCAA 17349 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338670587285976