Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20rhopaloa_20[refseq_20GCF_5F000236305.1_202013-02-22] 22,819 sequences; 197,375,704 total letters Query= NC_006658.1 Length=30655 Score E Sequences producing significant alignments: (Bits) Value seq6191 80.6 5e-11 >seq6191 Length=1184 Score = 80.6 bits (88), Expect = 5e-11 Identities = 72/89 (81%), Gaps = 1/89 (1%) Strand=Plus/Plus Query 4614 AAAACTAGCTAAGAATGAGTTCGaaaaaaaCTTTTATAAATTAATGAATAATGCGGTTTT 4673 |||| ||||||| ||||| || |||||||| |||| ||||||||||||||| || || | Sbjct 724 AAAATTAGCTAAAAATGAATTTGAAAAAAATTTTTTTAAATTAATGAATAACGCTGTGTA 783 Query 4674 TGGAAAGACGATGGAGAATGTAC-GAAAA 4701 || || || ||||| ||||| | ||||| Sbjct 784 CGGGAAAACAATGGAAAATGTCCAGAAAA 812 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 97947851325726