Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20rhopaloa_20[refseq_20GCF_5F000236305.1_202013-02-22] 22,819 sequences; 197,375,704 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq8502 396 3e-105 seq1813 396 3e-105 seq8501 392 4e-104 seq22136 161 1e-34 >seq8502 Length=4749 Score = 396 bits (438), Expect = 3e-105 Identities = 1214/1865 (65%), Gaps = 33/1865 (2%) Strand=Plus/Plus Query 61995 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 62054 ||||| ||||| | | || || || || || || || ||||||||||| || || || Sbjct 1164 GTGAACTGAATTGCATTGGCGGCTGGCTTTGTGCGCAGGTAGTACATTCCGGTCTTAAGT 1223 Query 62055 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 62114 || |||| |||||| || || ||| | ||| ||| | || || || | | Sbjct 1224 CCAGCTTTCCAAGAGTAAAAGTGAATGGACGTCAATTTTCCATAGTTTGGCTCAGCCACA 1283 Query 62115 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 62174 || ||||| | || |||||||| || || || || || | || || |||||||| || Sbjct 1284 TGAATATTGAACGACTGACTTTGGTCTATAAACGCCCCACGATCAGCGGCCATTTTAATT 1343 Query 62175 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAAC-TCGCTTAATATCTTCTGGAAG 62233 | | ||| || |||||||| | |||||| |||| |||| | | ||| | | | Sbjct 1344 GTGGACTTCACTGAGATTTCCCACACAGTTTTGTAAAGATCGCGAACTTTCTGGGGAATG 1403 Query 62234 GTTTGTATTC--TGAATGGATCCACCATCTGCCA-TAATCCTATTCTTGATCTCATCATT 62290 || | || | || ||||| || || ||| | | ||| ||||| || || |||| Sbjct 1404 GTCTCAATACCTTGGATGGAGCC-CCTGCTGGAAATGATCTGGTTCTTCATGTCGTCATC 1462 Query 62291 CCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCC 62350 ||| || | ||| ||||| | || | | ||| | || || || || ||||| || Sbjct 1463 CCACAAGTCGAGCTCAGTTAAGTCCCTCAACAAATGATGGTTGACCACCTGGAATTCACC 1522 Query 62351 AGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATTATTTCC 62410 ||||| |||| | || ||||| || ||||||| || || | || || || ||||| Sbjct 1523 AGACAGAACTCGTCTGGTATAAATGTTCGTGGTATAGGGCTCGAAAGATTCGTTGTTTCC 1582 Query 62411 CAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACC 62470 || |||||||||||| || ||||| |||||||| || || | | || | | ||| Sbjct 1583 CATAATTTGAGCAGTAGACGCAGTAGGCATAGGGGCAACAAGCAGGGAGTTCCGGACACC 1642 Query 62471 GTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACNNN 62530 || || |||| || ||||| || ||||| ||| || | || || Sbjct 1643 GTGCTTTTTGATGGACTCCTTTAGTTTTTGCCAATCCCACAGGTTCGTTGGCTGTTTGTC 1702 Query 62531 NNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTATCGTATGG 62590 || ||||| || || || || ||| |||| || || || || Sbjct 1703 CCACATGTCGTACTGCAGAATTCCTTTGCTCACGGGGCTTCCCTCATAGGTCTCATAGGG 1762 Query 62591 TCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAA 62650 ||||| || || |||||||| || || || | |||||||| ||||| ||||| || Sbjct 1763 ACCTTCGACCTGCGCCAGTTCACAGCTGGCTTCCAGGGCACCGTAGTAAATCGTTTCAAA 1822 Query 62651 GATCTTCTTATTTA----GATCTTGTGCTTCCAGGCTATCAAATGGATAATTTAAGAGAA 62706 |||| || ||| | || | | |||| || ||| |||| | | ||||| Sbjct 1823 TATCTGCTGATTCAAAAAGACCGGCTTCTTCA---CTTTCATATGGGAATCGCATGAGAA 1879 Query 62707 TAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGA 62766 | || ||||| || || || |||||||| || || | || | ||||||| ||| || Sbjct 1880 TCAAGGCGTCAGCGAAACCCTGAACACCGATGCCCACGGGACGATGTCTCAAATTGGATT 1939 Query 62767 TTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACAA 62826 | | || ||||| | |||||| | || ||||| || || || ||||||||| || || Sbjct 1940 TCTTTGCCTCTGGGAGGGGATAAAAGTTGATATCAATTATCTTGTTGAGATTTTTGGTAA 1999 Query 62827 TTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGCCCATC---TATTACAAACA 62883 ||| || ||||| ||||| | ||||||||| || | | ||||||| Sbjct 2000 CCGTCTTGGTAACTTCCTTAAGTTTCTGGAAATCAAATTTTTTCTCGGGTGTGACAAACA 2059 Query 62884 TGTTCAAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTA 62943 |||| | || | |||||||| || || || || | ||||| | | ||||| | Sbjct 2060 TGTTAAGAGCGATGGATGCCAGGTTGCACACTGCAATCTCATCCGGCGAGGAATATTCAA 2119 Query 62944 TTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTT 63003 || || ||||| | || || ||||| || || || | || || || || || || Sbjct 2120 CGATTTCTGTGCACAAGTTGCTGCACTTAATGGTGCCAACGTTCTGCTGGTTGCTTTTCC 2179 Query 63004 TGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAA 63063 |||| || |||||||| | || || | || | |||||||| | ||| || || |||| Sbjct 2180 TGTTGCAGGCATCCTTGAAGAGCATATACGGGTTGCCAGTTTCCACCTGCGACTCAATAA 2239 Query 63064 TCGCTTTCCAGACG-ACTCGAGCCTTTATTATA-GATTTGTATCTCCTTTCTCTT--TCG 63119 | || ||| | | ||| ||||||| | | | || | | || ||||| ||| Sbjct 2240 TGGCAAACCACAAGGACT-GAGCCTTGACCGTTCGGTTCGCACGACC---CTCTTGCTCG 2295 Query 63120 TAT--AGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATT 63177 ||| |||||| | || ||||| || || ||||| |||| || || || || |||| Sbjct 2296 TATTTAGTGTACAGCTTC--TCGAATTCATCGCCCCAGACATCGTGCAGGCCCGGGCATT 2353 Query 63178 CATCCGGACACATCAACGACCACTCTCCGTCAT---CCTTCACTCGTTTCATAAAGAGAT 63234 | ||| ||||||| |||||| | || |||| ||| || |||||||| ||||||| Sbjct 2354 TGTGCGGGCACATCAGCGACCAAT-TC--TCATTGGCCTCGACGCGTTTCATGAAGAGAT 2410 Query 63235 CAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCT 63294 | || |||||||| || ||| ||||| | || | || ||||| || || || || | Sbjct 2411 CGGGTATCCAAAGGGCGTAAAACAGATCGCGGGCGCGATTCTCCTCCTTGCCAGTGTTTT 2470 Query 63295 TTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAA 63354 | || || || || ||| | | | ||| || ||||| || |||| ||| ||||| | Sbjct 2471 TCTTGAGTTCCAGAAACTCAAAGACATCCGAGTGCCAGGGCTCCAGGTAAATGGCAAAGG 2530 Query 63355 CTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCA 63414 | || || || ||| || |||||||| | || | || || || | || |||| Sbjct 2531 CACCGGGACGCTTGCCGCCACCCTGATCCACATAGCGTGCCACATTGTTGAAGACCCTCA 2590 Query 63415 ACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCAC 63474 ||| |||| | || || || | ||||| || ||| | ||| || | || | || | Sbjct 2591 GCATGGGAACTAGGCCATTGGAAGTGCCATTCGTGCCGCAAATAGAGGTGCCTTTTGCCC 2650 Query 63475 GAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTT 63534 | || | || || || || || |||||| ||| ||||| | ||||| ||| Sbjct 2651 GGATGCAATGAACATTCAGTCCAATGCCACCTGCCGATTTCGAGATCATGGCGCAGTGTT 2710 Query 63535 TTAACGTGTCATAGATACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAG 63594 | || | | |||| ||||| || ||| | ||||| | | || |||||| || Sbjct 2711 CCACCGATTTAAAGATGCCCTCGATCGAGTCAGCCGTCATGGTCAAAAGGAAACAGGAAG 2770 Query 63595 ACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATT 63654 ||| || | ||| | || | || ||| | || || || ||||| || || || Sbjct 2771 ACAGCTGCGGGCGATTTGTGGCAGCGGCAAAAAGCGTTGGCGATGCGTGGGTGAAGAATC 2830 Query 63655 TTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTA 63714 ||||| | || ||||| || || | || | || |||||| | ||| ||||||| Sbjct 2831 GCTCAGACAAAAGGTTGTAGGTTTCCACGGCCGCATCAATATCCTCTCCATGGATTCCTA 2890 Query 63715 CTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACA 63774 ||| || ||||| |||||||| || || | || ||||||| ||| | |||| || Sbjct 2891 TTGCCACGCGCATCAACATGTGTTGCGGACGCTCGGCGATCTTTCCATTTCTCTTCAGCA 2950 Query 63775 AGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAA 63834 || || ||| | ||||| || |||||||||||||| ||| || || || |||| Sbjct 2951 GATAAGAACGTTCGAGGGTTTTGAATCCAAAATAGTTGTACCCAAAATCACGATCATAAA 3010 Query 63835 TAATA 63839 | ||| Sbjct 3011 TTATA 3015 >seq1813 Length=4749 Score = 396 bits (438), Expect = 3e-105 Identities = 1211/1861 (65%), Gaps = 26/1861 (1%) Strand=Plus/Plus Query 61995 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 62054 ||||| ||||| | | || || || || || || || ||||||||||| || || || Sbjct 1164 GTGAACTGAATTGCATTGGCGGCTGGCTTTGTGCGCAGGTAGTACATTCCGGTCTTAAGT 1223 Query 62055 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 62114 || |||| |||||| || || ||| | ||| ||| | || || || | | Sbjct 1224 CCAGCTTTCCAAGAGTAAAAGTGAATGGACGTCAATTTTCCATAGTTTGGCTCAGCCACA 1283 Query 62115 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 62174 || ||||| | || |||||||| || || || || || | || || |||||||| || Sbjct 1284 TGAATATTGAACGACTGACTTTGGTCTATAAACGCCCCACGATCAGCGGCCATTTTAATT 1343 Query 62175 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAAC-TCGCTTAATATCTTCTGGAAG 62233 | | ||| || |||||||| | |||||| |||| |||| | | ||| | | | Sbjct 1344 GTGGACTTCACTGAGATTTCCCACACAGTTTTGTAAAGATCGCGAACTTTCTGGGGAATG 1403 Query 62234 GTTTGTATTC--TGAATGGATCCACCATCTGCCA-TAATCCTATTCTTGATCTCATCATT 62290 || | || | || ||||| || || ||| | | ||| ||||| || || |||| Sbjct 1404 GTCTCAATACCTTGGATGGAGCC-CCTGCTGGAAATGATCTGGTTCTTCATGTCGTCATC 1462 Query 62291 CCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCC 62350 ||| || | ||| ||||| | || | | ||| | || || || || ||||| || Sbjct 1463 CCACAAGTCGAGCTCAGTTAAGTCCCTCAACAAATGATGGTTGACCACCTGGAATTCACC 1522 Query 62351 AGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATTATTTCC 62410 ||||| |||| | || ||||| || ||||||| || || | || || || ||||| Sbjct 1523 AGACAGAACTCGTCTGGTATAAATGTTCGTGGTATAGGGCTCGAAAGATTCGTTGTTTCC 1582 Query 62411 CAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACC 62470 || |||||||||||| || ||||| |||||||| || || | | || | | ||| Sbjct 1583 CATAATTTGAGCAGTAGACGCAGTAGGCATAGGGGCAACAAGCAGGGAGTTCCGGACACC 1642 Query 62471 GTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACNNN 62530 || || |||| || ||||| || ||||| ||| || | || || Sbjct 1643 GTGCTTTTTGATGGACTCCTTTAGTTTTTGCCAATCCCACAGGTTCGTTGGCTGTTTGTC 1702 Query 62531 NNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTATCGTATGG 62590 || ||||| || || || || ||| |||| || || || || Sbjct 1703 CCACATGTCGTACTGCAGAATTCCTTTGCTCACGGGGCTTCCCTCATAGGTCTCATAGGG 1762 Query 62591 TCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAA 62650 ||||| || || |||||||| || || || | |||||||| ||||| ||||| || Sbjct 1763 ACCTTCGACCTGCGCCAGTTCACAGCTGGCTTCCAGGGCACCGTAGTAAATCGTTTCAAA 1822 Query 62651 GATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAATTTAAGAGAATAAA 62710 |||| || ||| | | || || || ||| |||| | | |||||| || Sbjct 1823 TATCTGCTGATTCAAAAGACCGGCCTCTTCACTTTCATATGGGAATCGCATGAGAATCAA 1882 Query 62711 CGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTC 62770 ||||| || || || |||||||| || || | || | ||||||| ||| || | | Sbjct 1883 GGCGTCAGCGAAACCCTGAACACCGATGCCCACGGGACGATGTCTCAAATTGGATTTCTT 1942 Query 62771 AGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACAATTAC 62830 || ||||| | |||||| | || ||||| || || || ||||||||| || || Sbjct 1943 TGCCTCTGGGAGGGGATAAAAGTTGATATCAATTATCTTGTTGAGATTTTTGGTAACCGT 2002 Query 62831 TTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGCCCATC---TATTACAAACATGTT 62887 ||| || ||||| ||||| | ||||||||| || | | ||||||||||| Sbjct 2003 CTTGGTAACTTCCTTAAGTTTCTGGAAATCAAATTTTTTCTCGGGTGTGACAAACATGTT 2062 Query 62888 CAAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTAT 62947 | || | |||||||| || || || || | ||||| | | ||||| | || Sbjct 2063 AAGAGCGATGGATGCCAGGTTGCACACTGCAATCTCATCCGGCGAGGAATATTCAACGAT 2122 Query 62948 CTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTT 63007 || ||||| | || || ||||| || || || | || || || || || || |||| Sbjct 2123 TTCTGTGCACAAGTTGCTGCACTTAATGGTGCCAACGTTCTGCTGGTTGCTTTTCCTGTT 2182 Query 63008 ACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGC 63067 || |||||||| | || || | || | |||||||| | ||| || || ||||| || Sbjct 2183 GCAGGCATCCTTGAAGAGCATATACGGGTTGCCAGTTTCCACCTGCGACTCAATAATGGC 2242 Query 63068 TTTCCAGACG-ACTCGAGCCTTTATTATA-GATTTGTATCTCCTTTCTCTT--TCGTAT- 63122 ||| | | ||| ||||||| | | | || | | || ||||| |||||| Sbjct 2243 AAACCACAAGGACT-GAGCCTTGACCGTTCGGTTCGCACGACC---CTCTTGCTCGTATT 2298 Query 63123 -AGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATC 63181 |||||| | || ||||| || || ||||| |||| || || || || |||| | Sbjct 2299 TAGTGTACAGCTTC--TCGAATTCATCGCCCCAGACATCGTGCAGGCCCGGGCATTTGTG 2356 Query 63182 CGGACACATCAACGACCACTCTCCGTCAT---CCTTCACTCGTTTCATAAAGAGATCAGG 63238 ||| ||||||| |||||| | || |||| ||| || |||||||| |||||||| || Sbjct 2357 CGGGCACATCAGCGACCAAT-TC--TCATTGGCCTCGACGCGTTTCATGAAGAGATCGGG 2413 Query 63239 AATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTT 63298 |||||||| || ||| ||||| | || | || ||||| || || || || || || Sbjct 2414 TATCCAAAGGGCGTAAAACAGATCGCGGGCGCGATTCTCCTCCTTGCCAGTGTTTTTCTT 2473 Query 63299 AAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCC 63358 || || || ||| | | | ||| || ||||| || |||| ||| ||||| | | || Sbjct 2474 GAGTTCCAGAAACTCAAAGACATCCGAGTGCCAGGGCTCCAGGTAAATGGCAAAGGCACC 2533 Query 63359 AGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACAT 63418 || || ||| || |||||||| | || | || || || | || |||| ||| Sbjct 2534 GGGACGCTTGCCGCCACCCTGATCCACATAGCGTGCCACATTGTTGAAGACCCTCAGCAT 2593 Query 63419 TGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAAT 63478 |||| | || || || | ||||| || ||| | ||| || | || | || || || Sbjct 2594 GGGAACTAGGCCATTGGAAGTGCCATTCGTGCCGCAAATAGAGGTGCCTTTTGCCCGGAT 2653 Query 63479 ATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAA 63538 | || || || || || |||||| ||| ||||| | ||||| ||| | Sbjct 2654 GCAATGAACATTCAGTCCAATGCCACCTGCCGATTTCGAGATCATGGCGCAGTGTTCCAC 2713 Query 63539 CGTGTCATAGATACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACAT 63598 || | | |||| ||||| || ||| | ||||| | | || |||||| ||||| Sbjct 2714 CGATTTAAAGATGCCCTCGATCGAGTCAGCCGTCATGGTCAAAAGGAAACAGGAAGACAG 2773 Query 63599 TTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTC 63658 || | ||| | || | || ||| | || || || ||||| || || || || Sbjct 2774 CTGCGGGCGATTTGTGGCAGCGGCAAAAAGCGTTGGCGATGCGTGGGTGAAGAATCGCTC 2833 Query 63659 AGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGC 63718 ||| | || ||||| || || | || | || |||||| | ||| ||||||| ||| Sbjct 2834 AGACAAAAGGTTGTAGGTTTCCACGGCCGCATCAATATCCTCTCCATGGATTCCTATTGC 2893 Query 63719 GACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTA 63778 || ||||| |||||||| || || | || ||||||| ||| | |||| || || Sbjct 2894 CACGCGCATCAACATGTGTTGCGGACGCTCGGCGATCTTTCCATTTCTCTTCAGCAGATA 2953 Query 63779 GGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAAT 63838 || ||| | ||||| || |||||||||||||| ||| || || || ||||| || Sbjct 2954 AGAACGTTCGAGGGTTTTGAATCCAAAATAGTTGTACCCAAAATCACGATCATAAATTAT 3013 Query 63839 A 63839 | Sbjct 3014 A 3014 >seq8501 Length=20033 Score = 392 bits (434), Expect = 4e-104 Identities = 1218/1868 (65%), Gaps = 38/1868 (2%) Strand=Plus/Minus Query 61995 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 62054 ||||| ||||| | | || || || || || || || ||||||||||| || || || Sbjct 2792 GTGAACTGAATTGCATTGGCGGCTGGCTTTGTGCGCAGGTAGTACATTCCGGTCTTAAGT 2733 Query 62055 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 62114 || |||| |||||| || || ||| | ||| ||| | || || || | | Sbjct 2732 CCAGCTTTCCAAGAGTAAAAGTGAATGGACGTCAATTTTCCATAGTTTGGCTCAGCCACA 2673 Query 62115 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 62174 || ||||| | || |||||||| || || || || || | || || |||||||| || Sbjct 2672 TGAATATTGAACGACTGACTTTGGTCTATAAACGCCCCACGATCAGCGGCCATTTTAATT 2613 Query 62175 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAAC-TCGCTTAATATCTTCTGGAAG 62233 | | ||| || |||||||| | |||||| |||| |||| | | ||| | | | Sbjct 2612 GTGGACTTCACTGAGATTTCCCACACAGTTTTGTAAAGATCGCGAACTTTCTGGGGAATG 2553 Query 62234 GTTTGTATTC--TGAATGGATCCACCATCTGCCA-TAATCCTATTCTTGATCTCATCATT 62290 || | || | || ||||| || || ||| | | ||| ||||| || || |||| Sbjct 2552 GTCTCAATACCTTGGATGGAGCC-CCTGCTGGAAATGATCTGGTTCTTCATGTCGTCATC 2494 Query 62291 CCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCC 62350 ||| || | ||| ||||| | || | | ||| | || || || || ||||| || Sbjct 2493 CCACAAGTCGAGCTCAGTTAAGTCCCTCAACAAATGATGGTTGACCACCTGGAATTCACC 2434 Query 62351 AGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATTATTTCC 62410 ||||| |||| | || ||||| || ||||||| || || | || || || ||||| Sbjct 2433 AGACAGAACTCGTCTGGTATAAATGTTCGTGGTATAGGGCTCGAAAGATTCGTTGTTTCC 2374 Query 62411 CAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACC 62470 || |||||||||||| || ||||| |||||||| || || | | || | | ||| Sbjct 2373 CATAATTTGAGCAGTAGACGCAGTAGGCATAGGGGCAACAAGCAGGGAGTTCCGGACACC 2314 Query 62471 GTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACNNN 62530 || || |||| || ||||| || ||||| ||| || | || || Sbjct 2313 GTGCTTTTTGATGGACTCCTTTAGTTTTTGCCAATCCCACAGGTTCGTTGGCTGTTTGTC 2254 Query 62531 NNNNNNNNNNNNTTG-TAGAATACCGTTACT-----GGCGTACGATCCTACATATGTA-T 62583 || |||||| || || || ||| ||| ||| |||| ||| | Sbjct 2253 CCACATGTCGTACTGCTAGAATTCCTTTGCTCACGGGGCTTAC---CCT-CATAGGTACT 2198 Query 62584 CGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGG 62643 | || || ||||| || || |||||||| || || || | |||||||| ||||| | Sbjct 2197 CATAGGGACCTTCGACCTGCGCCAGTTCACAGCTGGCTTCCAGGGCACCGTAGTAAATCG 2138 Query 62644 TTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAATTTAAGA 62703 |||| || |||| || ||| | | ||||| || ||| |||| | | || Sbjct 2137 TTTCAAATATCTGCTGATTCAAAAGACCGGCTTCTTCACTTTCATATGGGAATCGCATGA 2078 Query 62704 GAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAG 62763 |||| || ||||| || || || |||||||| || || | || | ||||||| ||| | Sbjct 2077 GAATCAAGGCGTCAGCGAAACCCTGAACACCGATGCCCACGGGACGATGTCTCAAATTGG 2018 Query 62764 AGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGA 62823 | | | || ||||| | |||||| | || ||||| || || || ||||||||| || Sbjct 2017 ATTTCTTTGCCTCTGGGAGGGGATAAAAGTTGATATCAATTATCTTGTTGAGATTTTTGG 1958 Query 62824 CAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGCCCATC---TATTACAA 62880 || ||| || ||||| ||||| | ||||||||| || | | |||| Sbjct 1957 TAACCGTCTTGGTAACTTCCTTAAGTTTCTGGAAATCAAATTTTTTCTCGGGTGTGACAA 1898 Query 62881 ACATGTTCAAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATT 62940 ||||||| | || | |||||||| || || || || | ||||| | | ||||| Sbjct 1897 ACATGTTAAGAGCGATGGATGCCAGGTTGCACACTGCAATCTCATCCGGCGAGGAATATT 1838 Query 62941 GTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCT 63000 | || || ||||| | || || ||||| || || || | || || || || || | Sbjct 1837 CAACGATTTCTGTGCACAAGTTGCTGCACTTAATGGTGCCAACGTTCTGCTGGTTGCTTT 1778 Query 63001 TTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTA 63060 | |||| || |||||||| | || || | || | |||||||| | ||| || || | Sbjct 1777 TCCTGTTGCAGGCATCCTTGAAGAGCATATACGGGTTGCCAGTTTCCACCTGCGACTCAA 1718 Query 63061 TAATCGCTTTCCAGACG-ACTCGAGCCTTTATTATA-GATTTGTATCTCCTTTCTCTT-- 63116 |||| || ||| | | ||| ||||||| | | | || | | || ||||| Sbjct 1717 TAATGGCAAACCACAAGGACT-GAGCCTTGACCGTTCGGTTCGCACGACC---CTCTTGC 1662 Query 63117 TCGTAT--AGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGAC 63174 |||||| |||||| | || ||||| || || ||||| |||| || || || || | Sbjct 1661 TCGTATTTAGTGTACAGCTTC--TCGAATTCATCGCCCCAGACATCGTGCAGGCCCGGGC 1604 Query 63175 ATTCATCCGGACACATCAACGACCACTCTCCGTCAT---CCTTCACTCGTTTCATAAAGA 63231 ||| | ||| ||||||| |||||| | || |||| ||| || |||||||| |||| Sbjct 1603 ATTTGTGCGGGCACATCAGCGACCAAT-TC--TCATTGGCCTCGACGCGTTTCATGAAGA 1547 Query 63232 GATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTAT 63291 |||| || |||||||| || ||| ||||| | || | || ||||| || || || | Sbjct 1546 GATCGGGTATCCAAAGGGCGTAAAACAGATCGCGGGCGCGATTCTCCTCCTTGCCAGTGT 1487 Query 63292 TCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCA 63351 | ||| | || || || ||| | | | ||| || ||||| || |||| ||| ||||| | Sbjct 1486 T-TTTCTGAGTTCCAGAAACTCAAAGACATCCGAGTGCCAGGGCTCCAGGTAAATGGCAA 1428 Query 63352 TAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTC 63411 | || || || ||| || |||||||| | || | || || || | || | Sbjct 1427 AGGCACCGGGACGCTTGCCGCCACCCTGATCCACATAGCGTGCCACATTGTTGAAGACCC 1368 Query 63412 TCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGG 63471 ||| ||| |||| | || || || | ||||| || ||| | ||| || | || | | Sbjct 1367 TCAGCATGGGAACTAGGCCATTGGAAGTGCCATTCGTGCCGCAAATAGAGGTGCCTTTTG 1308 Query 63472 CACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATC 63531 | || || | || || || || || |||||| ||| ||||| | ||||| Sbjct 1307 CCCGGATGCAATGAACATTCAGTCCAATGCCACCTGCCGATTTCGAGATCATGGCGCAGT 1248 Query 63532 GTTTTAACGTGTCATAGATACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGC 63591 ||| | || | | |||| ||||| || ||| | ||||| | | || |||||| Sbjct 1247 GTTCCACCGATTTAAAGATGCCCTCGATCGAGTCAGCCGTCATGGTCAAAAGGAAACAGG 1188 Query 63592 TAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACC 63651 ||||| || | ||| | || | || ||| | || || || ||||| || || Sbjct 1187 AAGACAGCTGCGGGCGATTTGTGGCAGCGGCAAAAAGCGTTGGCGATGCGTGGGTGAAGA 1128 Query 63652 ATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTC 63711 || ||||| | || ||||| || || | || | || |||||| | ||| |||| Sbjct 1127 ATCGCTCAGACAAAAGGTTGTAGGTTTCCACGGCCGCATCAATATCCTCTCCATGGATTC 1068 Query 63712 CTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCA 63771 ||| ||| || ||||| |||||||| || || | || ||||||| ||| | |||| Sbjct 1067 CTATTGCCACGCGCATCAACATGTGTTGCGGACGCTCGGCGATCTTTCCATTTCTCTTCA 1008 Query 63772 ACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGT 63831 || || || ||| | ||||| || |||||||||||||| ||| || || || | Sbjct 1007 GCAGATAAGAACGTTCGAGGGTTTTGAATCCAAAATAGTTGTACCCAAAATCACGATCAT 948 Query 63832 AAATAATA 63839 |||| ||| Sbjct 947 AAATTATA 940 >seq22136 Length=515022 Score = 161 bits (178), Expect = 1e-34 Identities = 468/718 (65%), Gaps = 3/718 (0%) Strand=Plus/Plus Query 33016 TGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTTCC 33075 ||||| || ||||| || ||||| || || || || || |||| || || | ||| Sbjct 289634 TGGTACTCGCCCACCTTCTTCTCGAAGAAGTTGGTCTTGCCGTCCAGGGAGATCATCTCC 289693 Query 33076 ATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATCAAT 33135 ||||| | ||||| || | || || || ||| || |||||||| | ||| Sbjct 289694 ATGAAGTTGAACGGGTTCTTGGTGTTGTAGATCTTTCCAACGCCCAATTCCACCAGCAAA 289753 Query 33136 CTATCCGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTTA 33195 | ||||| ||||| || || || ||| | || || ||||| || ||||| || Sbjct 289754 CGGTCCGCCACGAACTCAATGTACTGCGACATGAGGTCGCAGTTCATGCCAATAAGGTTT 289813 Query 33196 ACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAATAGAT 33255 || || || || | || || || || || ||||||| |||||||| || || Sbjct 289814 ACGGGCAGGGCATCGGTGAGGAACTCCTGCTCAATGGCCACCGCATCACGGATGATCTCG 289873 Query 33256 CTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGAAATCG 33315 | | | || || ||| | || | | ||| | ||||||| ||||| || Sbjct 289874 ATGATGCGCTCGCGCCTGGGTCGCTGAACCAGATGCTGGAACATCAGCACGGCGAAGTCA 289933 Query 33316 CAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGG 33375 ||||||| |||||||| | || ||||||||||| || || || || ||||| | Sbjct 289934 CAGTGCAATCCCTCGTCCCGGGAGATCAGTTCGTTGGAGAAGGTCAGGCCCGGCATCAAA 289993 Query 33376 CCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACT 33435 || || || || ||||| || ||||| ||||| || |||||||| || || || Sbjct 289994 CCGCGTTTCTTTAGCCAGAAAATGGAGGCGAAACTGCCGCTGAAGAAGATGCCCTCCACG 290053 Query 33436 GCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCG--CTGTCATG-TATCCACTTTTGA 33492 || |||||||| || | | ||| || || |||| || | | ||||| | Sbjct 290054 GCGGCAAAGGCGATGATGCGCTCCCCGAAATTGGCGGACTTGGAGGAGATCCAGGACAGG 290113 Query 33493 GCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGttt 33552 ||||| || ||||| || || |||||||| || ||||| || || ||||||| | Sbjct 290114 GCCCAGTCCGCCTTGCGCTTCACCGCTGGCATCGTCTCGATGGCGTTGAACAGATAGTCT 290173 Query 33553 ttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATG 33612 | | ||| | ||||| ||||||| | || ||||| ||||| || | | Sbjct 290174 CGCTGGTGCGGATCCCGGATGTAAGTGTCGATCAGCACGCTGTACATCTCCGAGTGCACG 290233 Query 33613 TTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTA 33672 || || ||||| ||||| ||||||||||| || | ||||| || ||||| || || | Sbjct 290234 TTCTCCATGGCGATCTGGAATCCGTAGAAGCAGCGGGCCTCCGTGATCTGCACCTCCTGA 290293 Query 33673 CAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCA 33730 | || || ||| | | || ||||| || || || || ||| || || || |||| Sbjct 290294 CTGAAGCGCTCCACGAGGTTCTCATTAACAATGCCATCGGAGGCGGCGAAGAAGGCCA 290351 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622769512098040