Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20rhopaloa_20[refseq_20GCF_5F000236305.1_202013-02-22]
22,819 sequences; 197,375,704 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq8502 396 3e-105
seq1813 396 3e-105
seq8501 392 4e-104
seq22136 161 1e-34
>seq8502
Length=4749
Score = 396 bits (438), Expect = 3e-105
Identities = 1214/1865 (65%), Gaps = 33/1865 (2%)
Strand=Plus/Plus
Query 61995 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 62054
||||| ||||| | | || || || || || || || ||||||||||| || || ||
Sbjct 1164 GTGAACTGAATTGCATTGGCGGCTGGCTTTGTGCGCAGGTAGTACATTCCGGTCTTAAGT 1223
Query 62055 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 62114
|| |||| |||||| || || ||| | ||| ||| | || || || | |
Sbjct 1224 CCAGCTTTCCAAGAGTAAAAGTGAATGGACGTCAATTTTCCATAGTTTGGCTCAGCCACA 1283
Query 62115 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 62174
|| ||||| | || |||||||| || || || || || | || || |||||||| ||
Sbjct 1284 TGAATATTGAACGACTGACTTTGGTCTATAAACGCCCCACGATCAGCGGCCATTTTAATT 1343
Query 62175 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAAC-TCGCTTAATATCTTCTGGAAG 62233
| | ||| || |||||||| | |||||| |||| |||| | | ||| | | |
Sbjct 1344 GTGGACTTCACTGAGATTTCCCACACAGTTTTGTAAAGATCGCGAACTTTCTGGGGAATG 1403
Query 62234 GTTTGTATTC--TGAATGGATCCACCATCTGCCA-TAATCCTATTCTTGATCTCATCATT 62290
|| | || | || ||||| || || ||| | | ||| ||||| || || ||||
Sbjct 1404 GTCTCAATACCTTGGATGGAGCC-CCTGCTGGAAATGATCTGGTTCTTCATGTCGTCATC 1462
Query 62291 CCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCC 62350
||| || | ||| ||||| | || | | ||| | || || || || ||||| ||
Sbjct 1463 CCACAAGTCGAGCTCAGTTAAGTCCCTCAACAAATGATGGTTGACCACCTGGAATTCACC 1522
Query 62351 AGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATTATTTCC 62410
||||| |||| | || ||||| || ||||||| || || | || || || |||||
Sbjct 1523 AGACAGAACTCGTCTGGTATAAATGTTCGTGGTATAGGGCTCGAAAGATTCGTTGTTTCC 1582
Query 62411 CAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACC 62470
|| |||||||||||| || ||||| |||||||| || || | | || | | |||
Sbjct 1583 CATAATTTGAGCAGTAGACGCAGTAGGCATAGGGGCAACAAGCAGGGAGTTCCGGACACC 1642
Query 62471 GTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACNNN 62530
|| || |||| || ||||| || ||||| ||| || | || ||
Sbjct 1643 GTGCTTTTTGATGGACTCCTTTAGTTTTTGCCAATCCCACAGGTTCGTTGGCTGTTTGTC 1702
Query 62531 NNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTATCGTATGG 62590
|| ||||| || || || || ||| |||| || || || ||
Sbjct 1703 CCACATGTCGTACTGCAGAATTCCTTTGCTCACGGGGCTTCCCTCATAGGTCTCATAGGG 1762
Query 62591 TCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAA 62650
||||| || || |||||||| || || || | |||||||| ||||| ||||| ||
Sbjct 1763 ACCTTCGACCTGCGCCAGTTCACAGCTGGCTTCCAGGGCACCGTAGTAAATCGTTTCAAA 1822
Query 62651 GATCTTCTTATTTA----GATCTTGTGCTTCCAGGCTATCAAATGGATAATTTAAGAGAA 62706
|||| || ||| | || | | |||| || ||| |||| | | |||||
Sbjct 1823 TATCTGCTGATTCAAAAAGACCGGCTTCTTCA---CTTTCATATGGGAATCGCATGAGAA 1879
Query 62707 TAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGA 62766
| || ||||| || || || |||||||| || || | || | ||||||| ||| ||
Sbjct 1880 TCAAGGCGTCAGCGAAACCCTGAACACCGATGCCCACGGGACGATGTCTCAAATTGGATT 1939
Query 62767 TTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACAA 62826
| | || ||||| | |||||| | || ||||| || || || ||||||||| || ||
Sbjct 1940 TCTTTGCCTCTGGGAGGGGATAAAAGTTGATATCAATTATCTTGTTGAGATTTTTGGTAA 1999
Query 62827 TTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGCCCATC---TATTACAAACA 62883
||| || ||||| ||||| | ||||||||| || | | |||||||
Sbjct 2000 CCGTCTTGGTAACTTCCTTAAGTTTCTGGAAATCAAATTTTTTCTCGGGTGTGACAAACA 2059
Query 62884 TGTTCAAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTA 62943
|||| | || | |||||||| || || || || | ||||| | | ||||| |
Sbjct 2060 TGTTAAGAGCGATGGATGCCAGGTTGCACACTGCAATCTCATCCGGCGAGGAATATTCAA 2119
Query 62944 TTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTT 63003
|| || ||||| | || || ||||| || || || | || || || || || ||
Sbjct 2120 CGATTTCTGTGCACAAGTTGCTGCACTTAATGGTGCCAACGTTCTGCTGGTTGCTTTTCC 2179
Query 63004 TGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAA 63063
|||| || |||||||| | || || | || | |||||||| | ||| || || ||||
Sbjct 2180 TGTTGCAGGCATCCTTGAAGAGCATATACGGGTTGCCAGTTTCCACCTGCGACTCAATAA 2239
Query 63064 TCGCTTTCCAGACG-ACTCGAGCCTTTATTATA-GATTTGTATCTCCTTTCTCTT--TCG 63119
| || ||| | | ||| ||||||| | | | || | | || ||||| |||
Sbjct 2240 TGGCAAACCACAAGGACT-GAGCCTTGACCGTTCGGTTCGCACGACC---CTCTTGCTCG 2295
Query 63120 TAT--AGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATT 63177
||| |||||| | || ||||| || || ||||| |||| || || || || ||||
Sbjct 2296 TATTTAGTGTACAGCTTC--TCGAATTCATCGCCCCAGACATCGTGCAGGCCCGGGCATT 2353
Query 63178 CATCCGGACACATCAACGACCACTCTCCGTCAT---CCTTCACTCGTTTCATAAAGAGAT 63234
| ||| ||||||| |||||| | || |||| ||| || |||||||| |||||||
Sbjct 2354 TGTGCGGGCACATCAGCGACCAAT-TC--TCATTGGCCTCGACGCGTTTCATGAAGAGAT 2410
Query 63235 CAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCT 63294
| || |||||||| || ||| ||||| | || | || ||||| || || || || |
Sbjct 2411 CGGGTATCCAAAGGGCGTAAAACAGATCGCGGGCGCGATTCTCCTCCTTGCCAGTGTTTT 2470
Query 63295 TTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAA 63354
| || || || || ||| | | | ||| || ||||| || |||| ||| ||||| |
Sbjct 2471 TCTTGAGTTCCAGAAACTCAAAGACATCCGAGTGCCAGGGCTCCAGGTAAATGGCAAAGG 2530
Query 63355 CTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCA 63414
| || || || ||| || |||||||| | || | || || || | || ||||
Sbjct 2531 CACCGGGACGCTTGCCGCCACCCTGATCCACATAGCGTGCCACATTGTTGAAGACCCTCA 2590
Query 63415 ACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCAC 63474
||| |||| | || || || | ||||| || ||| | ||| || | || | || |
Sbjct 2591 GCATGGGAACTAGGCCATTGGAAGTGCCATTCGTGCCGCAAATAGAGGTGCCTTTTGCCC 2650
Query 63475 GAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTT 63534
| || | || || || || || |||||| ||| ||||| | ||||| |||
Sbjct 2651 GGATGCAATGAACATTCAGTCCAATGCCACCTGCCGATTTCGAGATCATGGCGCAGTGTT 2710
Query 63535 TTAACGTGTCATAGATACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAG 63594
| || | | |||| ||||| || ||| | ||||| | | || |||||| ||
Sbjct 2711 CCACCGATTTAAAGATGCCCTCGATCGAGTCAGCCGTCATGGTCAAAAGGAAACAGGAAG 2770
Query 63595 ACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATT 63654
||| || | ||| | || | || ||| | || || || ||||| || || ||
Sbjct 2771 ACAGCTGCGGGCGATTTGTGGCAGCGGCAAAAAGCGTTGGCGATGCGTGGGTGAAGAATC 2830
Query 63655 TTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTA 63714
||||| | || ||||| || || | || | || |||||| | ||| |||||||
Sbjct 2831 GCTCAGACAAAAGGTTGTAGGTTTCCACGGCCGCATCAATATCCTCTCCATGGATTCCTA 2890
Query 63715 CTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACA 63774
||| || ||||| |||||||| || || | || ||||||| ||| | |||| ||
Sbjct 2891 TTGCCACGCGCATCAACATGTGTTGCGGACGCTCGGCGATCTTTCCATTTCTCTTCAGCA 2950
Query 63775 AGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAA 63834
|| || ||| | ||||| || |||||||||||||| ||| || || || ||||
Sbjct 2951 GATAAGAACGTTCGAGGGTTTTGAATCCAAAATAGTTGTACCCAAAATCACGATCATAAA 3010
Query 63835 TAATA 63839
| |||
Sbjct 3011 TTATA 3015
>seq1813
Length=4749
Score = 396 bits (438), Expect = 3e-105
Identities = 1211/1861 (65%), Gaps = 26/1861 (1%)
Strand=Plus/Plus
Query 61995 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 62054
||||| ||||| | | || || || || || || || ||||||||||| || || ||
Sbjct 1164 GTGAACTGAATTGCATTGGCGGCTGGCTTTGTGCGCAGGTAGTACATTCCGGTCTTAAGT 1223
Query 62055 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 62114
|| |||| |||||| || || ||| | ||| ||| | || || || | |
Sbjct 1224 CCAGCTTTCCAAGAGTAAAAGTGAATGGACGTCAATTTTCCATAGTTTGGCTCAGCCACA 1283
Query 62115 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 62174
|| ||||| | || |||||||| || || || || || | || || |||||||| ||
Sbjct 1284 TGAATATTGAACGACTGACTTTGGTCTATAAACGCCCCACGATCAGCGGCCATTTTAATT 1343
Query 62175 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAAC-TCGCTTAATATCTTCTGGAAG 62233
| | ||| || |||||||| | |||||| |||| |||| | | ||| | | |
Sbjct 1344 GTGGACTTCACTGAGATTTCCCACACAGTTTTGTAAAGATCGCGAACTTTCTGGGGAATG 1403
Query 62234 GTTTGTATTC--TGAATGGATCCACCATCTGCCA-TAATCCTATTCTTGATCTCATCATT 62290
|| | || | || ||||| || || ||| | | ||| ||||| || || ||||
Sbjct 1404 GTCTCAATACCTTGGATGGAGCC-CCTGCTGGAAATGATCTGGTTCTTCATGTCGTCATC 1462
Query 62291 CCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCC 62350
||| || | ||| ||||| | || | | ||| | || || || || ||||| ||
Sbjct 1463 CCACAAGTCGAGCTCAGTTAAGTCCCTCAACAAATGATGGTTGACCACCTGGAATTCACC 1522
Query 62351 AGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATTATTTCC 62410
||||| |||| | || ||||| || ||||||| || || | || || || |||||
Sbjct 1523 AGACAGAACTCGTCTGGTATAAATGTTCGTGGTATAGGGCTCGAAAGATTCGTTGTTTCC 1582
Query 62411 CAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACC 62470
|| |||||||||||| || ||||| |||||||| || || | | || | | |||
Sbjct 1583 CATAATTTGAGCAGTAGACGCAGTAGGCATAGGGGCAACAAGCAGGGAGTTCCGGACACC 1642
Query 62471 GTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACNNN 62530
|| || |||| || ||||| || ||||| ||| || | || ||
Sbjct 1643 GTGCTTTTTGATGGACTCCTTTAGTTTTTGCCAATCCCACAGGTTCGTTGGCTGTTTGTC 1702
Query 62531 NNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTATCGTATGG 62590
|| ||||| || || || || ||| |||| || || || ||
Sbjct 1703 CCACATGTCGTACTGCAGAATTCCTTTGCTCACGGGGCTTCCCTCATAGGTCTCATAGGG 1762
Query 62591 TCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAA 62650
||||| || || |||||||| || || || | |||||||| ||||| ||||| ||
Sbjct 1763 ACCTTCGACCTGCGCCAGTTCACAGCTGGCTTCCAGGGCACCGTAGTAAATCGTTTCAAA 1822
Query 62651 GATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAATTTAAGAGAATAAA 62710
|||| || ||| | | || || || ||| |||| | | |||||| ||
Sbjct 1823 TATCTGCTGATTCAAAAGACCGGCCTCTTCACTTTCATATGGGAATCGCATGAGAATCAA 1882
Query 62711 CGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTC 62770
||||| || || || |||||||| || || | || | ||||||| ||| || | |
Sbjct 1883 GGCGTCAGCGAAACCCTGAACACCGATGCCCACGGGACGATGTCTCAAATTGGATTTCTT 1942
Query 62771 AGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACAATTAC 62830
|| ||||| | |||||| | || ||||| || || || ||||||||| || ||
Sbjct 1943 TGCCTCTGGGAGGGGATAAAAGTTGATATCAATTATCTTGTTGAGATTTTTGGTAACCGT 2002
Query 62831 TTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGCCCATC---TATTACAAACATGTT 62887
||| || ||||| ||||| | ||||||||| || | | |||||||||||
Sbjct 2003 CTTGGTAACTTCCTTAAGTTTCTGGAAATCAAATTTTTTCTCGGGTGTGACAAACATGTT 2062
Query 62888 CAAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTAT 62947
| || | |||||||| || || || || | ||||| | | ||||| | ||
Sbjct 2063 AAGAGCGATGGATGCCAGGTTGCACACTGCAATCTCATCCGGCGAGGAATATTCAACGAT 2122
Query 62948 CTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTT 63007
|| ||||| | || || ||||| || || || | || || || || || || ||||
Sbjct 2123 TTCTGTGCACAAGTTGCTGCACTTAATGGTGCCAACGTTCTGCTGGTTGCTTTTCCTGTT 2182
Query 63008 ACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGC 63067
|| |||||||| | || || | || | |||||||| | ||| || || ||||| ||
Sbjct 2183 GCAGGCATCCTTGAAGAGCATATACGGGTTGCCAGTTTCCACCTGCGACTCAATAATGGC 2242
Query 63068 TTTCCAGACG-ACTCGAGCCTTTATTATA-GATTTGTATCTCCTTTCTCTT--TCGTAT- 63122
||| | | ||| ||||||| | | | || | | || ||||| ||||||
Sbjct 2243 AAACCACAAGGACT-GAGCCTTGACCGTTCGGTTCGCACGACC---CTCTTGCTCGTATT 2298
Query 63123 -AGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATC 63181
|||||| | || ||||| || || ||||| |||| || || || || |||| |
Sbjct 2299 TAGTGTACAGCTTC--TCGAATTCATCGCCCCAGACATCGTGCAGGCCCGGGCATTTGTG 2356
Query 63182 CGGACACATCAACGACCACTCTCCGTCAT---CCTTCACTCGTTTCATAAAGAGATCAGG 63238
||| ||||||| |||||| | || |||| ||| || |||||||| |||||||| ||
Sbjct 2357 CGGGCACATCAGCGACCAAT-TC--TCATTGGCCTCGACGCGTTTCATGAAGAGATCGGG 2413
Query 63239 AATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTT 63298
|||||||| || ||| ||||| | || | || ||||| || || || || || ||
Sbjct 2414 TATCCAAAGGGCGTAAAACAGATCGCGGGCGCGATTCTCCTCCTTGCCAGTGTTTTTCTT 2473
Query 63299 AAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCC 63358
|| || || ||| | | | ||| || ||||| || |||| ||| ||||| | | ||
Sbjct 2474 GAGTTCCAGAAACTCAAAGACATCCGAGTGCCAGGGCTCCAGGTAAATGGCAAAGGCACC 2533
Query 63359 AGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACAT 63418
|| || ||| || |||||||| | || | || || || | || |||| |||
Sbjct 2534 GGGACGCTTGCCGCCACCCTGATCCACATAGCGTGCCACATTGTTGAAGACCCTCAGCAT 2593
Query 63419 TGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAAT 63478
|||| | || || || | ||||| || ||| | ||| || | || | || || ||
Sbjct 2594 GGGAACTAGGCCATTGGAAGTGCCATTCGTGCCGCAAATAGAGGTGCCTTTTGCCCGGAT 2653
Query 63479 ATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAA 63538
| || || || || || |||||| ||| ||||| | ||||| ||| |
Sbjct 2654 GCAATGAACATTCAGTCCAATGCCACCTGCCGATTTCGAGATCATGGCGCAGTGTTCCAC 2713
Query 63539 CGTGTCATAGATACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACAT 63598
|| | | |||| ||||| || ||| | ||||| | | || |||||| |||||
Sbjct 2714 CGATTTAAAGATGCCCTCGATCGAGTCAGCCGTCATGGTCAAAAGGAAACAGGAAGACAG 2773
Query 63599 TTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTC 63658
|| | ||| | || | || ||| | || || || ||||| || || || ||
Sbjct 2774 CTGCGGGCGATTTGTGGCAGCGGCAAAAAGCGTTGGCGATGCGTGGGTGAAGAATCGCTC 2833
Query 63659 AGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGC 63718
||| | || ||||| || || | || | || |||||| | ||| ||||||| |||
Sbjct 2834 AGACAAAAGGTTGTAGGTTTCCACGGCCGCATCAATATCCTCTCCATGGATTCCTATTGC 2893
Query 63719 GACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTA 63778
|| ||||| |||||||| || || | || ||||||| ||| | |||| || ||
Sbjct 2894 CACGCGCATCAACATGTGTTGCGGACGCTCGGCGATCTTTCCATTTCTCTTCAGCAGATA 2953
Query 63779 GGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAAT 63838
|| ||| | ||||| || |||||||||||||| ||| || || || ||||| ||
Sbjct 2954 AGAACGTTCGAGGGTTTTGAATCCAAAATAGTTGTACCCAAAATCACGATCATAAATTAT 3013
Query 63839 A 63839
|
Sbjct 3014 A 3014
>seq8501
Length=20033
Score = 392 bits (434), Expect = 4e-104
Identities = 1218/1868 (65%), Gaps = 38/1868 (2%)
Strand=Plus/Minus
Query 61995 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 62054
||||| ||||| | | || || || || || || || ||||||||||| || || ||
Sbjct 2792 GTGAACTGAATTGCATTGGCGGCTGGCTTTGTGCGCAGGTAGTACATTCCGGTCTTAAGT 2733
Query 62055 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 62114
|| |||| |||||| || || ||| | ||| ||| | || || || | |
Sbjct 2732 CCAGCTTTCCAAGAGTAAAAGTGAATGGACGTCAATTTTCCATAGTTTGGCTCAGCCACA 2673
Query 62115 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 62174
|| ||||| | || |||||||| || || || || || | || || |||||||| ||
Sbjct 2672 TGAATATTGAACGACTGACTTTGGTCTATAAACGCCCCACGATCAGCGGCCATTTTAATT 2613
Query 62175 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAAC-TCGCTTAATATCTTCTGGAAG 62233
| | ||| || |||||||| | |||||| |||| |||| | | ||| | | |
Sbjct 2612 GTGGACTTCACTGAGATTTCCCACACAGTTTTGTAAAGATCGCGAACTTTCTGGGGAATG 2553
Query 62234 GTTTGTATTC--TGAATGGATCCACCATCTGCCA-TAATCCTATTCTTGATCTCATCATT 62290
|| | || | || ||||| || || ||| | | ||| ||||| || || ||||
Sbjct 2552 GTCTCAATACCTTGGATGGAGCC-CCTGCTGGAAATGATCTGGTTCTTCATGTCGTCATC 2494
Query 62291 CCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCC 62350
||| || | ||| ||||| | || | | ||| | || || || || ||||| ||
Sbjct 2493 CCACAAGTCGAGCTCAGTTAAGTCCCTCAACAAATGATGGTTGACCACCTGGAATTCACC 2434
Query 62351 AGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATTATTTCC 62410
||||| |||| | || ||||| || ||||||| || || | || || || |||||
Sbjct 2433 AGACAGAACTCGTCTGGTATAAATGTTCGTGGTATAGGGCTCGAAAGATTCGTTGTTTCC 2374
Query 62411 CAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACC 62470
|| |||||||||||| || ||||| |||||||| || || | | || | | |||
Sbjct 2373 CATAATTTGAGCAGTAGACGCAGTAGGCATAGGGGCAACAAGCAGGGAGTTCCGGACACC 2314
Query 62471 GTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACNNN 62530
|| || |||| || ||||| || ||||| ||| || | || ||
Sbjct 2313 GTGCTTTTTGATGGACTCCTTTAGTTTTTGCCAATCCCACAGGTTCGTTGGCTGTTTGTC 2254
Query 62531 NNNNNNNNNNNNTTG-TAGAATACCGTTACT-----GGCGTACGATCCTACATATGTA-T 62583
|| |||||| || || || ||| ||| ||| |||| ||| |
Sbjct 2253 CCACATGTCGTACTGCTAGAATTCCTTTGCTCACGGGGCTTAC---CCT-CATAGGTACT 2198
Query 62584 CGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGG 62643
| || || ||||| || || |||||||| || || || | |||||||| ||||| |
Sbjct 2197 CATAGGGACCTTCGACCTGCGCCAGTTCACAGCTGGCTTCCAGGGCACCGTAGTAAATCG 2138
Query 62644 TTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAATTTAAGA 62703
|||| || |||| || ||| | | ||||| || ||| |||| | | ||
Sbjct 2137 TTTCAAATATCTGCTGATTCAAAAGACCGGCTTCTTCACTTTCATATGGGAATCGCATGA 2078
Query 62704 GAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAG 62763
|||| || ||||| || || || |||||||| || || | || | ||||||| ||| |
Sbjct 2077 GAATCAAGGCGTCAGCGAAACCCTGAACACCGATGCCCACGGGACGATGTCTCAAATTGG 2018
Query 62764 AGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGA 62823
| | | || ||||| | |||||| | || ||||| || || || ||||||||| ||
Sbjct 2017 ATTTCTTTGCCTCTGGGAGGGGATAAAAGTTGATATCAATTATCTTGTTGAGATTTTTGG 1958
Query 62824 CAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGCCCATC---TATTACAA 62880
|| ||| || ||||| ||||| | ||||||||| || | | ||||
Sbjct 1957 TAACCGTCTTGGTAACTTCCTTAAGTTTCTGGAAATCAAATTTTTTCTCGGGTGTGACAA 1898
Query 62881 ACATGTTCAAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATT 62940
||||||| | || | |||||||| || || || || | ||||| | | |||||
Sbjct 1897 ACATGTTAAGAGCGATGGATGCCAGGTTGCACACTGCAATCTCATCCGGCGAGGAATATT 1838
Query 62941 GTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCT 63000
| || || ||||| | || || ||||| || || || | || || || || || |
Sbjct 1837 CAACGATTTCTGTGCACAAGTTGCTGCACTTAATGGTGCCAACGTTCTGCTGGTTGCTTT 1778
Query 63001 TTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTA 63060
| |||| || |||||||| | || || | || | |||||||| | ||| || || |
Sbjct 1777 TCCTGTTGCAGGCATCCTTGAAGAGCATATACGGGTTGCCAGTTTCCACCTGCGACTCAA 1718
Query 63061 TAATCGCTTTCCAGACG-ACTCGAGCCTTTATTATA-GATTTGTATCTCCTTTCTCTT-- 63116
|||| || ||| | | ||| ||||||| | | | || | | || |||||
Sbjct 1717 TAATGGCAAACCACAAGGACT-GAGCCTTGACCGTTCGGTTCGCACGACC---CTCTTGC 1662
Query 63117 TCGTAT--AGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGAC 63174
|||||| |||||| | || ||||| || || ||||| |||| || || || || |
Sbjct 1661 TCGTATTTAGTGTACAGCTTC--TCGAATTCATCGCCCCAGACATCGTGCAGGCCCGGGC 1604
Query 63175 ATTCATCCGGACACATCAACGACCACTCTCCGTCAT---CCTTCACTCGTTTCATAAAGA 63231
||| | ||| ||||||| |||||| | || |||| ||| || |||||||| ||||
Sbjct 1603 ATTTGTGCGGGCACATCAGCGACCAAT-TC--TCATTGGCCTCGACGCGTTTCATGAAGA 1547
Query 63232 GATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTAT 63291
|||| || |||||||| || ||| ||||| | || | || ||||| || || || |
Sbjct 1546 GATCGGGTATCCAAAGGGCGTAAAACAGATCGCGGGCGCGATTCTCCTCCTTGCCAGTGT 1487
Query 63292 TCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCA 63351
| ||| | || || || ||| | | | ||| || ||||| || |||| ||| ||||| |
Sbjct 1486 T-TTTCTGAGTTCCAGAAACTCAAAGACATCCGAGTGCCAGGGCTCCAGGTAAATGGCAA 1428
Query 63352 TAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTC 63411
| || || || ||| || |||||||| | || | || || || | || |
Sbjct 1427 AGGCACCGGGACGCTTGCCGCCACCCTGATCCACATAGCGTGCCACATTGTTGAAGACCC 1368
Query 63412 TCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGG 63471
||| ||| |||| | || || || | ||||| || ||| | ||| || | || | |
Sbjct 1367 TCAGCATGGGAACTAGGCCATTGGAAGTGCCATTCGTGCCGCAAATAGAGGTGCCTTTTG 1308
Query 63472 CACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATC 63531
| || || | || || || || || |||||| ||| ||||| | |||||
Sbjct 1307 CCCGGATGCAATGAACATTCAGTCCAATGCCACCTGCCGATTTCGAGATCATGGCGCAGT 1248
Query 63532 GTTTTAACGTGTCATAGATACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGC 63591
||| | || | | |||| ||||| || ||| | ||||| | | || ||||||
Sbjct 1247 GTTCCACCGATTTAAAGATGCCCTCGATCGAGTCAGCCGTCATGGTCAAAAGGAAACAGG 1188
Query 63592 TAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACC 63651
||||| || | ||| | || | || ||| | || || || ||||| || ||
Sbjct 1187 AAGACAGCTGCGGGCGATTTGTGGCAGCGGCAAAAAGCGTTGGCGATGCGTGGGTGAAGA 1128
Query 63652 ATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTC 63711
|| ||||| | || ||||| || || | || | || |||||| | ||| ||||
Sbjct 1127 ATCGCTCAGACAAAAGGTTGTAGGTTTCCACGGCCGCATCAATATCCTCTCCATGGATTC 1068
Query 63712 CTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCA 63771
||| ||| || ||||| |||||||| || || | || ||||||| ||| | ||||
Sbjct 1067 CTATTGCCACGCGCATCAACATGTGTTGCGGACGCTCGGCGATCTTTCCATTTCTCTTCA 1008
Query 63772 ACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGT 63831
|| || || ||| | ||||| || |||||||||||||| ||| || || || |
Sbjct 1007 GCAGATAAGAACGTTCGAGGGTTTTGAATCCAAAATAGTTGTACCCAAAATCACGATCAT 948
Query 63832 AAATAATA 63839
|||| |||
Sbjct 947 AAATTATA 940
>seq22136
Length=515022
Score = 161 bits (178), Expect = 1e-34
Identities = 468/718 (65%), Gaps = 3/718 (0%)
Strand=Plus/Plus
Query 33016 TGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTTCC 33075
||||| || ||||| || ||||| || || || || || |||| || || | |||
Sbjct 289634 TGGTACTCGCCCACCTTCTTCTCGAAGAAGTTGGTCTTGCCGTCCAGGGAGATCATCTCC 289693
Query 33076 ATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATCAAT 33135
||||| | ||||| || | || || || ||| || |||||||| | |||
Sbjct 289694 ATGAAGTTGAACGGGTTCTTGGTGTTGTAGATCTTTCCAACGCCCAATTCCACCAGCAAA 289753
Query 33136 CTATCCGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTTA 33195
| ||||| ||||| || || || ||| | || || ||||| || ||||| ||
Sbjct 289754 CGGTCCGCCACGAACTCAATGTACTGCGACATGAGGTCGCAGTTCATGCCAATAAGGTTT 289813
Query 33196 ACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAATAGAT 33255
|| || || || | || || || || || ||||||| |||||||| || ||
Sbjct 289814 ACGGGCAGGGCATCGGTGAGGAACTCCTGCTCAATGGCCACCGCATCACGGATGATCTCG 289873
Query 33256 CTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGAAATCG 33315
| | | || || ||| | || | | ||| | ||||||| ||||| ||
Sbjct 289874 ATGATGCGCTCGCGCCTGGGTCGCTGAACCAGATGCTGGAACATCAGCACGGCGAAGTCA 289933
Query 33316 CAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGG 33375
||||||| |||||||| | || ||||||||||| || || || || ||||| |
Sbjct 289934 CAGTGCAATCCCTCGTCCCGGGAGATCAGTTCGTTGGAGAAGGTCAGGCCCGGCATCAAA 289993
Query 33376 CCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACT 33435
|| || || || ||||| || ||||| ||||| || |||||||| || || ||
Sbjct 289994 CCGCGTTTCTTTAGCCAGAAAATGGAGGCGAAACTGCCGCTGAAGAAGATGCCCTCCACG 290053
Query 33436 GCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCG--CTGTCATG-TATCCACTTTTGA 33492
|| |||||||| || | | ||| || || |||| || | | ||||| |
Sbjct 290054 GCGGCAAAGGCGATGATGCGCTCCCCGAAATTGGCGGACTTGGAGGAGATCCAGGACAGG 290113
Query 33493 GCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGttt 33552
||||| || ||||| || || |||||||| || ||||| || || ||||||| |
Sbjct 290114 GCCCAGTCCGCCTTGCGCTTCACCGCTGGCATCGTCTCGATGGCGTTGAACAGATAGTCT 290173
Query 33553 ttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATG 33612
| | ||| | ||||| ||||||| | || ||||| ||||| || | |
Sbjct 290174 CGCTGGTGCGGATCCCGGATGTAAGTGTCGATCAGCACGCTGTACATCTCCGAGTGCACG 290233
Query 33613 TTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTA 33672
|| || ||||| ||||| ||||||||||| || | ||||| || ||||| || || |
Sbjct 290234 TTCTCCATGGCGATCTGGAATCCGTAGAAGCAGCGGGCCTCCGTGATCTGCACCTCCTGA 290293
Query 33673 CAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCA 33730
| || || ||| | | || ||||| || || || || ||| || || || ||||
Sbjct 290294 CTGAAGCGCTCCACGAGGTTCTCATTAACAATGCCATCGGAGGCGGCGAAGAAGGCCA 290351
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622769512098040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |