Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20rhopaloa_20[refseq_20GCF_5F000236305.1_202013-02-22] 22,819 sequences; 197,375,704 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq22136 367 2e-96 seq1813 260 3e-64 seq8502 255 1e-62 seq8501 233 4e-56 >seq22136 Length=515022 Score = 367 bits (406), Expect = 2e-96 Identities = 576/819 (70%), Gaps = 19/819 (2%) Strand=Plus/Minus Query 42335 CTGGACCGCCGAGGAGATTGACCTGGCCAAGGACACGGCCGGCTGGGAGTCACTGTCTGA 42394 |||||| | |||||| |||||||| |||||||| | ||| |||| | || |||| | Sbjct 290440 CTGGACTGTGGAGGAGGTTGACCTGTCCAAGGACTTGACCGACTGGCA-TC---GTCTCA 290385 Query 42395 -GAACGAAAAGTTT---TTCCTCAAAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCA 42450 | |||| || | ||| || || | |||||||||||||||||||| || |||| Sbjct 290384 AGGACGATGAGCGTCACTTCATCTCGCACGTGCTGGCCTTCTTCGCCGCCTCCGATGGCA 290325 Query 42451 TAGTCAATGAGAACCTGGCCACCAGGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCT 42510 | || ||||||||||| | | |||| | ||||||||| | ||||| |||| Sbjct 290324 TTGTTAATGAGAACCTCGTGGAGCGCTTCAGTCAGGAGGTGCAGATCACGGAGGCCCGCT 290265 Query 42511 GCTTCTACGGCTTCCAGATAGCCATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGC 42570 |||||||||| |||||||| ||||| |||||||||||||| ||| ||||| | ||| Sbjct 290264 GCTTCTACGGATTCCAGATCGCCATGGAGAACGTGCACTCGGAGATGTACAGCGTGCTGA 290205 Query 42571 TCAACACGTACATCCTGGATCCCGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGA 42630 || |||| ||||||| |||||| | |||| || |||||||| ||||| ||||||| Sbjct 290204 TCGACACTTACATCCGGGATCCGCACCAGCGAGACTATCTGTTCAACGCCATCGAGACGA 290145 Query 42631 TGCCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGATC----GAGAGTCCCGAC 42686 |||| | ||| |||||||||||||| || ||||||| |||| | Sbjct 290144 TGCCAGCGGTGAAGCGCAAGGCGGACTGGGCCCTGTCCTGGATCTCCTCCAAGTC----C 290089 Query 42687 GCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGC 42746 || | ||||| ||| | | | |||||| ||||||| ||||||||||||||| ||| Sbjct 290088 GCCAATTTCGGGGAGCGCATCATCGCCTTTGCCGCCGTGGAGGGCATCTTCTTCAGCGGC 290029 Query 42747 GCCTTCGCCTCCATCTTCTGGCTCAAGCAGAAGGTGTCGATGCCCGGACTCACCTTCTCG 42806 ||||||||||| |||||||| ||| | | | |||||| || || |||||||| Sbjct 290028 AGTTTCGCCTCCATTTTCTGGCTAAAGAAACGCGGTTTGATGCCGGGCCTGACCTTCTCC 289969 Query 42807 AACGAACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCG 42866 |||||||| ||| | |||||||||| |||| | ||||| ||| || ||||| | Sbjct 289968 AACGAACTGATCTCCCGGGACGAGGGATTGCACTGTGACTTCGCCGTGCTGATGTTCCAG 289909 Query 42867 AGCCACCTCAGGCACAAGCCCTCGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTG 42926 || || || ||| | ||||| || | |||||| || || ||| Sbjct 289908 ---CATCTGGTTCAGCGACCCAGGCGCGAGCGCATCATCGAGATCATCCGTGATGCGGTG 289852 Query 42927 GAGATCGAGAAGGAGTTCCTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCAC 42986 | || ||| ||||||||||||| | | |||||||| ||| | ||||||||| | Sbjct 289851 GCCATTGAGCAGGAGTTCCTCACCGATGCCCTGCCCGTAAACCTTATTGGCATGAACTGC 289792 Query 42987 GACCTCATGTGCAAGTACATCCAGTACGTCGCCGACCATCTCCTGTGCCAGATGGGTCTC 43046 |||||||||| ||||||| ||| ||| || |||| | | ||| | |||| | Sbjct 289791 GACCTCATGTCGCAGTACATTGAGTTCGTGGCGGACCGTTTGCTGGTGGAATTGGGCGTT 289732 Query 43047 AGCCGCCTCTACAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGC 43106 | |||||||||| | ||| ||| |||| ||||||| ||||| |||| ||| Sbjct 289731 GGAAAGATCTACAACACCAAGAACCCGTTCAACTTCATGGAGATGATCTCCCTGGACGGC 289672 Query 43107 AAGACCAACTTTTTCGAGAAGCGCGTCGCCGACTACCAG 43145 ||||||||||| ||||||||| || | ||| |||||| Sbjct 289671 AAGACCAACTTCTTCGAGAAGAAGGTGGGCGAGTACCAG 289633 >seq1813 Length=4749 Score = 260 bits (288), Expect = 3e-64 Identities = 924/1424 (65%), Gaps = 56/1424 (4%) Strand=Plus/Plus Query 243759 CGGCGGCCTTGGTCCTCAGGTAGTACATGCCGGTCTTGAGTCCACTGGACCAGGCGTGGA 243818 |||| | ||| || | |||||||||||| |||||||| |||||| ||| | || | Sbjct 1183 CGGCTGGCTTTGTGCGCAGGTAGTACATTCCGGTCTTAAGTCCAGCTTTCCAAGAGTAAA 1242 Query 243819 GGTGCATGGCCGTCAGCTTCTTCATCTTGAGCTTTGGGTCGTCCTCGCACAGAAAGAGGT 243878 ||| |||| ||||| || | ||| || ||||| || || ||| || | | Sbjct 1243 AGTGAATGGACGTCAATTT-TCCAT----AG-TTTGGCTCAGCC----ACATGAATA--T 1290 Query 243879 TGAGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCTCTGCGGCCATGGTGATGAGGTCCT 243938 ||| ||||| || ||||| | || | | | || || |||||||| | || | || Sbjct 1291 TGAACGACTGACTTTGGTCTATAAACGCCCCACGATCAGCGGCCATTTTAATTGTGGACT 1350 Query 243939 TC--TGAGATATCTCATACGCCGTCTTGTAGATGGGCTTGAGGTGCTCGGGGAACCCT-T 243995 || |||||| || || || || ||||| | | | || | |||||| | | Sbjct 1351 TCACTGAGATTTCCCACACA--GTTTTGTAAA-GATCGCGAACTTTCTGGGGAATGGTCT 1407 Query 243996 CGATGTTCTGCACCGAGCCCTTG-TGGACGATGAGCTGGGTGCGCATGTTATCGTTCCAC 244054 | || || | |||||| || |||| |||| |||| | ||||| || | |||| Sbjct 1408 CAATACCTTGGATGGAGCCCCTGCTGGAA-ATGATCTGGTTCTTCATGTCGTCATCCCAC 1466 Query 244055 AGGCCCAAGCGC--TCCAGCGCCTCGACCAGGTGCCTGTTCACCACCTGAAACTCTCCCG 244112 | | | | || | | || |||| || | || ||| |||||||| || || || | Sbjct 1467 AAGTCGA-GCTCAGTTAAGTCCCTCAACAAA-TGATGGTTGACCACCTGGAATTCACCAG 1524 Query 244113 ACAGCACGCGGCGCTGGTAGAG--GTTGCTGCTGAGCGGCTCGATGCTCTCCGTGTTGCC 244170 |||| || || | ||||| | ||| || | ||||||| || |||| || Sbjct 1525 ACAGAACTCGTC--TGGTATAAATGTTCGTGGTATAGGGCTCGAAAGATTCGTTGTTTCC 1582 Query 244171 CAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGCAGACTGTTCCTCACGCC 244230 || || || || || |||||| ||||| || | || ||||| ||||| || || Sbjct 1583 CATAATTTGAGCAGTAGACGCAGTAGGCATAGGGGCAACAAGCAGGGAGTTCCGGACACC 1642 Query 244231 GTGCCTCTGGATGCGGAGTC--TGAGCTCGTTCCAGTCCCACATGCCCGAGAGGTCCTCG 244288 |||| | | |||| || || | || | | ||| ||||||| | || | | Sbjct 1643 GTGCTTTTTGATG--GACTCCTTTAGTTTTTGCCAATCCCACAGGTTCGTTGGCT----- 1695 Query 244289 CGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCTGACGGGGCTGCCCTCGTAG 244348 ||||| |||||||||| ||||||| | || ||||| |||||||| ||||| ||| Sbjct 1696 -GTTTGT---CCCACATGTCGTACTGCAGAATTCCTTTGCTCACGGGGCTTCCCTCATAG 1751 Query 244349 GTCGGGTAGGGACCGTCGCGCTGGGCCAGCTTACAGCTCTCGTCGAGGGCGGCGTAGTAG 244408 ||| |||||||| ||| ||| ||||| | |||||| | || ||||| ||||||| Sbjct 1752 GTCTCATAGGGACCTTCGACCTGCGCCAGTTCACAGCTGGCTTCCAGGGCACCGTAGTAA 1811 Query 244409 ATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCGCAGGTGAAGGGGATGCCC 244468 || || || || ||| || |||| | ||||| | | | |||| | | Sbjct 1812 ATCGTTTCAAATATCTGCTGATTCAAAAGACCGGCCTCTTCACTTTCATATGGGAATCGC 1871 Query 244469 ATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGATGGGTCTGTGTCGCTTG 244528 || | || ||| |||| || | ||||| || |||||||| | ||| | |||| | Sbjct 1872 ATGAGAATCAAGGCGTCAGCGAAACCCTGAACACCGATGCCCACGGGACGATGTCTCAAA 1931 Query 244529 TTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGATCACCTTGTTGAGGTTG 244588 ||||| | | || || || | ||| ||||||||| || || | ||||||||| || Sbjct 1932 TTGGATTTCTTTGCCTCTGGGAGGGGATAAAAGTTGATATCAATTATCTTGTTGAGATTT 1991 Query 244589 CGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGTCGTACTCGTAGGGATCCTCG 244648 ||| | | | | || || || ||| || || | | | |||| Sbjct 1992 TTGGTAACCGTCTTGGTAACTTCCTTAAGTTTCTGGAAATCAAATTTTTT------CTCG 2045 Query 244649 GCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGCTGGCCAGGTTGCAGACGGCCACC 244708 | ||| | |||||| ||| || |||| | ||||||||||| || || | | Sbjct 2046 G-----GTG----TGACAAACATGTTAAGAGCGATGGATGCCAGGTTGCACACTGCAATC 2096 Query 244709 TCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACTGCACTTGATGGTGCCC 244768 || |||| || || | || || || ||||| | ||| |||||||| |||||||| Sbjct 2097 TCATCCGGCGAGGAATATTCAACGATTTCTGTGCACAAGTTGCTGCACTTAATGGTGCCA 2156 Query 244769 AGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGCATGAAGGGCCCCCCG 244828 | || ||| || ||| || ||||||||| |||||| ||||||| | || || Sbjct 2157 ACGTTCTGCTGGTTGCTTTTCCTGTTGCAGGCATCCTTGAAGAGCATATACGGGTTGCCA 2216 Query 244829 GTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCTAGCCTTGACCGTCCTGCGA 244888 || || | ||| | | | | | ||| | | | |||||||||||| | | Sbjct 2217 GTTTCCACCTGCGACTCAATAATGGCAAACCACAAGGACTGAGCCTTGACCGTTCGGTTC 2276 Query 244889 GCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAACTCGGGGCCCCAGACCTCG 244948 || |||||| |||||| |||||||| |||||| || ||||||||| ||| Sbjct 2277 GCACGACCCTCTTGCTCGTATTTAGTGTACAGCTTCTCGAATTCATCGCCCCAGACATCG 2336 Query 244949 TCTAGGCCGGGGCACGACGCCGGGCACATGAGACTCCACTCGCCGCCGTCCTTGACCCTC 245008 | ||||| ||||| ||||||||| || ||| | | | ||| ||| | Sbjct 2337 TGCAGGCCCGGGCATTTGTGCGGGCACATCAGCGACCAATTCTCATTGGCCTCGACGCGT 2396 Query 245009 TGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTGCTCGTCC 245068 | ||||||||| ||||| ||||| ||||| | || || || | || | | ||| ||| Sbjct 2397 TTCATGAAGAGATCGGGTATCCAAAGGGCGTAAAACAGATCGCGGGCGCGATTCTCCTCC 2456 Query 245069 GAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGCTCCATG 245128 ||||||||| ||| | || |||| ||| |||||||| || |||||||||||||| | Sbjct 2457 TTGCCAGTGTTTTTCTTGAGTTCCAGAAACTCAAAGACATCCGAGTGCCAGGGCTCCAGG 2516 Query 245129 TAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCAC 245172 || | || | ||| ||||| |||||| ||| ||||| ||||| Sbjct 2517 TAAATGGCAAAGGCACCGGGACGCTTGCCGCCACCCTGATCCAC 2560 >seq8502 Length=4749 Score = 255 bits (282), Expect = 1e-62 Identities = 924/1425 (65%), Gaps = 57/1425 (4%) Strand=Plus/Plus Query 243759 CGGCGGCCTTGGTCCTCAGGTAGTACATGCCGGTCTTGAGTCCACTGGACCAGGCGTGGA 243818 |||| | ||| || | |||||||||||| |||||||| |||||| ||| | || | Sbjct 1183 CGGCTGGCTTTGTGCGCAGGTAGTACATTCCGGTCTTAAGTCCAGCTTTCCAAGAGTAAA 1242 Query 243819 GGTGCATGGCCGTCAGCTTCTTCATCTTGAGCTTTGGGTCGTCCTCGCACAGAAAGAGGT 243878 ||| |||| ||||| || | ||| || ||||| || || ||| || | | Sbjct 1243 AGTGAATGGACGTCAATTT-TCCAT----AG-TTTGGCTCAGCC----ACATGAATA--T 1290 Query 243879 TGAGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCTCTGCGGCCATGGTGATGAGGTCCT 243938 ||| ||||| || ||||| | || | | | || || |||||||| | || | || Sbjct 1291 TGAACGACTGACTTTGGTCTATAAACGCCCCACGATCAGCGGCCATTTTAATTGTGGACT 1350 Query 243939 TC--TGAGATATCTCATACGCCGTCTTGTAGATGGGCTTGAGGTGCTCGGGGAACCCT-T 243995 || |||||| || || || || ||||| | | | || | |||||| | | Sbjct 1351 TCACTGAGATTTCCCACACA--GTTTTGTAAA-GATCGCGAACTTTCTGGGGAATGGTCT 1407 Query 243996 CGATGTTCTGCACCGAGCCCTTG-TGGACGATGAGCTGGGTGCGCATGTTATCGTTCCAC 244054 | || || | |||||| || |||| |||| |||| | ||||| || | |||| Sbjct 1408 CAATACCTTGGATGGAGCCCCTGCTGGAA-ATGATCTGGTTCTTCATGTCGTCATCCCAC 1466 Query 244055 AGGCCCAAGCGC--TCCAGCGCCTCGACCAGGTGCCTGTTCACCACCTGAAACTCTCCCG 244112 | | | | || | | || |||| || | || ||| |||||||| || || || | Sbjct 1467 AAGTCGA-GCTCAGTTAAGTCCCTCAACAAA-TGATGGTTGACCACCTGGAATTCACCAG 1524 Query 244113 ACAGCACGCGGCGCTGGTAGAG--GTTGCTGCTGAGCGGCTCGATGCTCTCCGTGTTGCC 244170 |||| || || | ||||| | ||| || | ||||||| || |||| || Sbjct 1525 ACAGAACTCGTC--TGGTATAAATGTTCGTGGTATAGGGCTCGAAAGATTCGTTGTTTCC 1582 Query 244171 CAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGCAGACTGTTCCTCACGCC 244230 || || || || || |||||| ||||| || | || ||||| ||||| || || Sbjct 1583 CATAATTTGAGCAGTAGACGCAGTAGGCATAGGGGCAACAAGCAGGGAGTTCCGGACACC 1642 Query 244231 GTGCCTCTGGATGCGGAGTC--TGAGCTCGTTCCAGTCCCACATGCCCGAGAGGTCCTCG 244288 |||| | | |||| || || | || | | ||| ||||||| | || | | Sbjct 1643 GTGCTTTTTGATG--GACTCCTTTAGTTTTTGCCAATCCCACAGGTTCGTTGGCT----- 1695 Query 244289 CGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCTGACGGGGCTGCCCTCGTAG 244348 ||||| |||||||||| ||||||| | || ||||| |||||||| ||||| ||| Sbjct 1696 -GTTTGT---CCCACATGTCGTACTGCAGAATTCCTTTGCTCACGGGGCTTCCCTCATAG 1751 Query 244349 GTCGGGTAGGGACCGTCGCGCTGGGCCAGCTTACAGCTCTCGTCGAGGGCGGCGTAGTAG 244408 ||| |||||||| ||| ||| ||||| | |||||| | || ||||| ||||||| Sbjct 1752 GTCTCATAGGGACCTTCGACCTGCGCCAGTTCACAGCTGGCTTCCAGGGCACCGTAGTAA 1811 Query 244409 ATGGTCTCGAAGATCATCTTGTTCATGTCG-CGGGCCTTGCCGCAGGTGAAGGGGATGCC 244467 || || || || ||| || |||| | | ||| | | | | |||| | Sbjct 1812 ATCGTTTCAAATATCTGCTGATTCAAAAAGACCGGCTTCTTCACTTTCATATGGGAATCG 1871 Query 244468 CATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGATGGGTCTGTGTCGCTT 244527 ||| | || ||| |||| || | ||||| || |||||||| | ||| | |||| | Sbjct 1872 CATGAGAATCAAGGCGTCAGCGAAACCCTGAACACCGATGCCCACGGGACGATGTCTCAA 1931 Query 244528 GTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGATCACCTTGTTGAGGTT 244587 ||||| | | || || || | ||| ||||||||| || || | ||||||||| || Sbjct 1932 ATTGGATTTCTTTGCCTCTGGGAGGGGATAAAAGTTGATATCAATTATCTTGTTGAGATT 1991 Query 244588 GCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGTCGTACTCGTAGGGATCCTC 244647 ||| | | | | || || || ||| || || | | | ||| Sbjct 1992 TTTGGTAACCGTCTTGGTAACTTCCTTAAGTTTCTGGAAATCAAATTTTTT------CTC 2045 Query 244648 GGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGCTGGCCAGGTTGCAGACGGCCAC 244707 || ||| | |||||| ||| || |||| | ||||||||||| || || | Sbjct 2046 GG-----GTG----TGACAAACATGTTAAGAGCGATGGATGCCAGGTTGCACACTGCAAT 2096 Query 244708 CTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACTGCACTTGATGGTGCC 244767 ||| |||| || || | || || || ||||| | ||| |||||||| |||||||| Sbjct 2097 CTCATCCGGCGAGGAATATTCAACGATTTCTGTGCACAAGTTGCTGCACTTAATGGTGCC 2156 Query 244768 CAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGCATGAAGGGCCCCCC 244827 | || ||| || ||| || ||||||||| |||||| ||||||| | || || Sbjct 2157 AACGTTCTGCTGGTTGCTTTTCCTGTTGCAGGCATCCTTGAAGAGCATATACGGGTTGCC 2216 Query 244828 GGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCTAGCCTTGACCGTCCTGCG 244887 || || | ||| | | | | | ||| | | | |||||||||||| | | Sbjct 2217 AGTTTCCACCTGCGACTCAATAATGGCAAACCACAAGGACTGAGCCTTGACCGTTCGGTT 2276 Query 244888 AGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAACTCGGGGCCCCAGACCTC 244947 || |||||| |||||| |||||||| |||||| || ||||||||| || Sbjct 2277 CGCACGACCCTCTTGCTCGTATTTAGTGTACAGCTTCTCGAATTCATCGCCCCAGACATC 2336 Query 244948 GTCTAGGCCGGGGCACGACGCCGGGCACATGAGACTCCACTCGCCGCCGTCCTTGACCCT 245007 || ||||| ||||| ||||||||| || ||| | | | ||| ||| | Sbjct 2337 GTGCAGGCCCGGGCATTTGTGCGGGCACATCAGCGACCAATTCTCATTGGCCTCGACGCG 2396 Query 245008 CTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTGCTCGTC 245067 | ||||||||| ||||| ||||| ||||| | || || || | || | | ||| || Sbjct 2397 TTTCATGAAGAGATCGGGTATCCAAAGGGCGTAAAACAGATCGCGGGCGCGATTCTCCTC 2456 Query 245068 CGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGCTCCAT 245127 | ||||||||| ||| | || |||| ||| |||||||| || |||||||||||||| Sbjct 2457 CTTGCCAGTGTTTTTCTTGAGTTCCAGAAACTCAAAGACATCCGAGTGCCAGGGCTCCAG 2516 Query 245128 GTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCAC 245172 ||| | || | ||| ||||| |||||| ||| ||||| ||||| Sbjct 2517 GTAAATGGCAAAGGCACCGGGACGCTTGCCGCCACCCTGATCCAC 2561 >seq8501 Length=20033 Score = 233 bits (258), Expect = 4e-56 Identities = 923/1427 (65%), Gaps = 60/1427 (4%) Strand=Plus/Minus Query 243759 CGGCGGCCTTGGTCCTCAGGTAGTACATGCCGGTCTTGAGTCCACTGGACCAGGCGTGGA 243818 |||| | ||| || | |||||||||||| |||||||| |||||| ||| | || | Sbjct 2773 CGGCTGGCTTTGTGCGCAGGTAGTACATTCCGGTCTTAAGTCCAGCTTTCCAAGAGTAAA 2714 Query 243819 GGTGCATGGCCGTCAGCTTCTTCATCTTGAGCTTTGGGTCGTCCTCGCACAGAAAGAGGT 243878 ||| |||| ||||| || | ||| || ||||| || || ||| || | | Sbjct 2713 AGTGAATGGACGTCAATTT-TCCAT----AG-TTTGGCTCAGCC----ACATGAATA--T 2666 Query 243879 TGAGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCTCTGCGGCCATGGTGATGAGGTCCT 243938 ||| ||||| || ||||| | || | | | || || |||||||| | || | || Sbjct 2665 TGAACGACTGACTTTGGTCTATAAACGCCCCACGATCAGCGGCCATTTTAATTGTGGACT 2606 Query 243939 TC--TGAGATATCTCATACGCCGTCTTGTAGATGGGCTTGAGGTGCTCGGGGAACCCT-T 243995 || |||||| || || || || ||||| | | | || | |||||| | | Sbjct 2605 TCACTGAGATTTCCCACACA--GTTTTGTAAA-GATCGCGAACTTTCTGGGGAATGGTCT 2549 Query 243996 CGATGTTCTGCACCGAGCCCTTG-TGGACGATGAGCTGGGTGCGCATGTTATCGTTCCAC 244054 | || || | |||||| || |||| |||| |||| | ||||| || | |||| Sbjct 2548 CAATACCTTGGATGGAGCCCCTGCTGGAA-ATGATCTGGTTCTTCATGTCGTCATCCCAC 2490 Query 244055 AGGCCCAAGCGC--TCCAGCGCCTCGACCAGGTGCCTGTTCACCACCTGAAACTCTCCCG 244112 | | | | || | | || |||| || | || ||| |||||||| || || || | Sbjct 2489 AAGTCGA-GCTCAGTTAAGTCCCTCAACAAA-TGATGGTTGACCACCTGGAATTCACCAG 2432 Query 244113 ACAGCACGCGGCGCTGGTAGAG--GTTGCTGCTGAGCGGCTCGATGCTCTCCGTGTTGCC 244170 |||| || || | ||||| | ||| || | ||||||| || |||| || Sbjct 2431 ACAGAACTCGTC--TGGTATAAATGTTCGTGGTATAGGGCTCGAAAGATTCGTTGTTTCC 2374 Query 244171 CAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGCAGACTGTTCCTCACGCC 244230 || || || || || |||||| ||||| || | || ||||| ||||| || || Sbjct 2373 CATAATTTGAGCAGTAGACGCAGTAGGCATAGGGGCAACAAGCAGGGAGTTCCGGACACC 2314 Query 244231 GTGCCTCTGGATGCGGAGTC--TGAGCTCGTTCCAGTCCCACATGCCCGAGAGGTCCTCG 244288 |||| | | |||| || || | || | | ||| ||||||| | || | | Sbjct 2313 GTGCTTTTTGATG--GACTCCTTTAGTTTTTGCCAATCCCACAGGTTCGTTGGCT----- 2261 Query 244289 CGTTTGAGGCCCCACATGTCAAACTGC-AGCAGCCCCTTGCTGACGGGGCTG-CCCTCGT 244346 ||||| |||||||||| ||||| || | || ||||| |||||||| ||||| | Sbjct 2260 -GTTTGT---CCCACATGTCGTACTGCTAGAATTCCTTTGCTCACGGGGCTTACCCTCAT 2205 Query 244347 AGGT-CGGGTAGGGACCGTCGCGCTGGGCCAGCTTACAGCTCTCGTCGAGGGCGGCGTAG 244405 |||| | |||||||| ||| ||| ||||| | |||||| | || ||||| ||||| Sbjct 2204 AGGTACTCATAGGGACCTTCGACCTGCGCCAGTTCACAGCTGGCTTCCAGGGCACCGTAG 2145 Query 244406 TAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCGCAGGTGAAGGGGATG 244465 || || || || || ||| || |||| | ||| | | | | |||| Sbjct 2144 TAAATCGTTTCAAATATCTGCTGATTCAAAAGACCGGCTTCTTCACTTTCATATGGGAAT 2085 Query 244466 CCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGATGGGTCTGTGTCGC 244525 | ||| | || ||| |||| || | ||||| || |||||||| | ||| | |||| | Sbjct 2084 CGCATGAGAATCAAGGCGTCAGCGAAACCCTGAACACCGATGCCCACGGGACGATGTCTC 2025 Query 244526 TTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGATCACCTTGTTGAGG 244585 ||||| | | || || || | ||| ||||||||| || || | ||||||||| Sbjct 2024 AAATTGGATTTCTTTGCCTCTGGGAGGGGATAAAAGTTGATATCAATTATCTTGTTGAGA 1965 Query 244586 TTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGTCGTACTCGTAGGGATCC 244645 || ||| | | | | || || || ||| || || | | | | Sbjct 1964 TTTTTGGTAACCGTCTTGGTAACTTCCTTAAGTTTCTGGAAATCAAATTTTTT------C 1911 Query 244646 TCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGCTGGCCAGGTTGCAGACGGCC 244705 |||| ||| | |||||| ||| || |||| | ||||||||||| || || Sbjct 1910 TCGG-----GTG----TGACAAACATGTTAAGAGCGATGGATGCCAGGTTGCACACTGCA 1860 Query 244706 ACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACTGCACTTGATGGTG 244765 | ||| |||| || || | || || || ||||| | ||| |||||||| |||||| Sbjct 1859 ATCTCATCCGGCGAGGAATATTCAACGATTTCTGTGCACAAGTTGCTGCACTTAATGGTG 1800 Query 244766 CCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGCATGAAGGGCCCC 244825 || | || ||| || ||| || ||||||||| |||||| ||||||| | || Sbjct 1799 CCAACGTTCTGCTGGTTGCTTTTCCTGTTGCAGGCATCCTTGAAGAGCATATACGGGTTG 1740 Query 244826 CCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCTAGCCTTGACCGTCCTG 244885 || || || | ||| | | | | | ||| | | | |||||||||||| | | Sbjct 1739 CCAGTTTCCACCTGCGACTCAATAATGGCAAACCACAAGGACTGAGCCTTGACCGTTCGG 1680 Query 244886 CGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAACTCGGGGCCCCAGACC 244945 || |||||| |||||| |||||||| |||||| || ||||||||| Sbjct 1679 TTCGCACGACCCTCTTGCTCGTATTTAGTGTACAGCTTCTCGAATTCATCGCCCCAGACA 1620 Query 244946 TCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACTCCACTCGCCGCCGTCCTTGACC 245005 |||| ||||| ||||| ||||||||| || ||| | | | ||| ||| Sbjct 1619 TCGTGCAGGCCCGGGCATTTGTGCGGGCACATCAGCGACCAATTCTCATTGGCCTCGACG 1560 Query 245006 CTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTGCTCG 245065 | | ||||||||| ||||| ||||| ||||| | || || || | || | | ||| Sbjct 1559 CGTTTCATGAAGAGATCGGGTATCCAAAGGGCGTAAAACAGATCGCGGGCGCGATTCTCC 1500 Query 245066 TCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGCTCC 245125 ||| ||||||||| || || || |||| ||| |||||||| || ||||||||||||| Sbjct 1499 TCCTTGCCAGTGTT-TTTCTGAGTTCCAGAAACTCAAAGACATCCGAGTGCCAGGGCTCC 1441 Query 245126 ATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCAC 245172 | ||| | || | ||| ||||| |||||| ||| ||||| ||||| Sbjct 1440 AGGTAAATGGCAAAGGCACCGGGACGCTTGCCGCCACCCTGATCCAC 1394 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944069839047440