Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20rhopaloa_20[refseq_20GCF_5F000236305.1_202013-02-22] 22,819 sequences; 197,375,704 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq1813 168 8e-37 seq8502 161 1e-34 seq8501 147 3e-30 seq22136 141 1e-28 seq20124 104 3e-17 >seq1813 Length=4749 Score = 168 bits (186), Expect = 8e-37 Identities = 885/1398 (63%), Gaps = 26/1398 (2%) Strand=Plus/Plus Query 113933 CGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGG 113992 ||||| ||| || || || || || ||||| || | || ||||| |||| ||||| Sbjct 1533 CGTCTGGTATAAATGTTCGTGGTATAGGGCTCGAAAGATTCGTTGTTTCCCATAATTTGA 1592 Query 113993 GCGGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACC---CTTTTCC 114049 || || || || || ||||| || || | || ||| ||| |||| ||| ||||| Sbjct 1593 GCAGTAGACGCAGTAGGCATAGGGGCAACAAGCAGGGAGTTCCGGACACCGTGCTTTT-- 1650 Query 114050 CTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTGCCACATA 114109 | ||| ||||| || | ||| || | | | ||| || | |||||| Sbjct 1651 -TGATGGACTCCTTTAGTTTTTGCCAATCCCACAGGTTCGTTGGCTGTTTGTCCCACATG 1709 Query 114110 TCAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCA 114169 || |||| || || |||| | | || ||||||| | ||||| || || || || Sbjct 1710 TCGTACTGCAGAATTCCTTTGCTCACGGGGCTTCCCTCATAGGTCTCATAGGGACCTTCG 1769 Query 114170 ACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGA 114229 |||| ||||| ||| |||| || || ||||| ||| || || || ||||| || | Sbjct 1770 ACCTGCGCCAGTTCACAGCTGGCTTCCAGGGCACCGTAGTAAATCGTTTCAAATATCTGC 1829 Query 114230 GCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCC 114289 ||||| |||||| || ||| | | || ||| | ||| || | || Sbjct 1830 TGATTCAAAAGACCGGCCTCTTCACTTTCATATGGGAATCGCATGAGAATCAAGGCGTCA 1889 Query 114290 GCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTC 114349 |||| ||| || ||||||| ||| | || |||||||||| ||| || || || || Sbjct 1890 GCGAAACCCTGAACACCGATGCCCACGGGACGATGTCTCAAATTGGATTTCTTTGCC-TC 1948 Query 114350 TCC-ACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGT 114408 | | ||||||||| || |||| || | | | || ||||||||||| || ||| || Sbjct 1949 TGGGAGGGGATAAAAGTTGATATCAATTATCTTGTTGAGATTTTTGGTAACCGTCTTGGT 2008 Query 114409 GATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAG 114468 | ||| | ||| || | | ||||||| | |||| ||||| || | ||| Sbjct 2009 AACTTCCTTAAGTTTCTGGAAATCAAATTTTT---TCTCGGGTGTGACAAACATGTTAAG 2065 Query 114469 GGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTC 114528 ||||| || ||||| || ||||| | |||||||| | || || | ||||| Sbjct 2066 AGCGATGGATGCCAGGTTGCACACTGCAATCTCATCCGGCGAGGAATATTCAACGATTTC 2125 Query 114529 CGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACA 114588 || ||||| || | |||||||||||| | ||||| || || || |||| || Sbjct 2126 TGTGCACAAGTTGCTGCACTTAATGGTGCCAACGTTCTGCTGGTTGCTTTTCCTGTTGCA 2185 Query 114589 CGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTT 114648 ||||||||| | ||||| || || | || || ||| || |||| | ||| || Sbjct 2186 GGCATCCTTGAAGAGCATATACGGGTTGCCAGTTTCCACCTGCGACTCAATAATGGCAAA 2245 Query 114649 CCA-GACATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGT 114707 ||| | | | | || | || || ||| || || ||||| | |||||| || |||| Sbjct 2246 CCACAAGGACTGAGCCTTG-ACCGTTCGGTTCGCACGACCCTCTTGCTCGTATTTAGTGT 2304 Query 114708 AGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGA 114767 | || || || || || ||| | | || || || || || | ||||| | Sbjct 2305 ACAGCTTCTCGAATTCATCGCCCCAGACATCGTGCAGGCCCGGGCATTTGTGCGGGCACA 2364 Query 114768 AGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAG 114827 || ||||| | || |||| || || ||||||||||| || || ||||| || | Sbjct 2365 TCAGCGACCAATTCTCATTGGCCTCGACGCGTTTCATGAAGAGATCGGGTATCCAAAGGG 2424 Query 114828 CTGAGAAGAGATCCCGACAGCGA-GCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAA 114886 | | || ||||| || |||| || || | | || || || | | |||| | Sbjct 2425 CGTAAAACAGATCGCGGGCGCGATTCTCCTCCTTGCCAGTGTTTTTCTTG-AGTTCCAGA 2483 Query 114887 AAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACG---A 114943 || || | || ||||| |||||| || |||||||| | || | | || ||| Sbjct 2484 AACTCAAAGACATCCGAGTGCCAGGGCTCCAGGTAAATGGCAAAGGCACCGGGACGCTTG 2543 Query 114944 CGACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGATA 115003 | ||| |||| | ||||| | || || || || | ||||| |||| | Sbjct 2544 CCGCCACCCTGATCCACATAGCGTGCCACATTGTTGAAGACCCTCAGCATGGGAACTAGG 2603 Query 115004 CCATCAGATTGGCCATTTGTCCCCCGAAT--ACGAGACTTATTGGCTCTGACATCATGGA 115061 |||| || |||||| || || | ||| | | | || || || | || ||| | Sbjct 2604 CCATTGGAAGTGCCATTCGTGCCGCAAATAGAGGTGCCT--TTTGCCCGGATGCAATGAA 2661 Query 115062 TGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGT 115121 | || ||||| || |||||| | || ||||| ||||| | || || | | Sbjct 2662 CATTCAGTCCAATGCCACCTGCCGATTTCGAGATCATGGCGCAGT--GTTCCACCGATTT 2719 Query 115122 --AGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGG 115179 |||| || |||||||||||| || | | | | |||||| ||| |||| || || Sbjct 2720 AAAGATGCCCTCGATCGAGTCAGCCGTCATGGTCAAAAGGAAACAGGAAGACAGCTGCGG 2779 Query 115180 CCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGGGACAT 115239 | ||| ||||| || || ||||| | |||||| |||| | | | |||| Sbjct 2780 GCGATTTGTGGCAGCGGCAAAAAGCGTTGGCGATGCGTGGGTGAAGAATCGCTCAGACAA 2839 Query 115240 CTTATCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCG 115299 | |||||| |||| | | || ||| || || || || || || || | || || Sbjct 2840 AAGGTTGTAGGTTTCCACGGCCGCATCAATATCCTCTCCATGGATTCCTATTGCCACGCG 2899 Query 115300 CATAAACATGTATTGGGG 115317 ||| ||||||| ||| || Sbjct 2900 CATCAACATGTGTTGCGG 2917 >seq8502 Length=4749 Score = 161 bits (178), Expect = 1e-34 Identities = 886/1400 (63%), Gaps = 29/1400 (2%) Strand=Plus/Plus Query 113933 CGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGG 113992 ||||| ||| || || || || || ||||| || | || ||||| |||| ||||| Sbjct 1533 CGTCTGGTATAAATGTTCGTGGTATAGGGCTCGAAAGATTCGTTGTTTCCCATAATTTGA 1592 Query 113993 GCGGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACC---CTTTTCC 114049 || || || || || ||||| || || | || ||| ||| |||| ||| ||||| Sbjct 1593 GCAGTAGACGCAGTAGGCATAGGGGCAACAAGCAGGGAGTTCCGGACACCGTGCTTTT-- 1650 Query 114050 CTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTGCCACATA 114109 | ||| ||||| || | ||| || | | | ||| || | |||||| Sbjct 1651 -TGATGGACTCCTTTAGTTTTTGCCAATCCCACAGGTTCGTTGGCTGTTTGTCCCACATG 1709 Query 114110 TCAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCA 114169 || |||| || || |||| | | || ||||||| | ||||| || || || || Sbjct 1710 TCGTACTGCAGAATTCCTTTGCTCACGGGGCTTCCCTCATAGGTCTCATAGGGACCTTCG 1769 Query 114170 ACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGA 114229 |||| ||||| ||| |||| || || ||||| ||| || || || ||||| || | Sbjct 1770 ACCTGCGCCAGTTCACAGCTGGCTTCCAGGGCACCGTAGTAAATCGTTTCAAATATCTGC 1829 Query 114230 GCATTCATT--GCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACAT 114287 ||||| | | ||| || || ||| | | || ||| | ||| || | | Sbjct 1830 TGATTCAAAAAGACC-GGCTTCTTCACTTTCATATGGGAATCGCATGAGAATCAAGGCGT 1888 Query 114288 CCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGG 114347 | |||| ||| || ||||||| ||| | || |||||||||| ||| || || || Sbjct 1889 CAGCGAAACCCTGAACACCGATGCCCACGGGACGATGTCTCAAATTGGATTTCTTTGCC- 1947 Query 114348 TCTCC-ACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTT 114406 ||| | ||||||||| || |||| || | | | || ||||||||||| || ||| Sbjct 1948 TCTGGGAGGGGATAAAAGTTGATATCAATTATCTTGTTGAGATTTTTGGTAACCGTCTTG 2007 Query 114407 GTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGA 114466 || | ||| | ||| || | | ||||||| | |||| ||||| || | | Sbjct 2008 GTAACTTCCTTAAGTTTCTGGAAATCAAATTTTT---TCTCGGGTGTGACAAACATGTTA 2064 Query 114467 AGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATT 114526 || ||||| || ||||| || ||||| | |||||||| | || || | ||| Sbjct 2065 AGAGCGATGGATGCCAGGTTGCACACTGCAATCTCATCCGGCGAGGAATATTCAACGATT 2124 Query 114527 TCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTA 114586 || || ||||| || | |||||||||||| | ||||| || || || |||| Sbjct 2125 TCTGTGCACAAGTTGCTGCACTTAATGGTGCCAACGTTCTGCTGGTTGCTTTTCCTGTTG 2184 Query 114587 CACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCC 114646 || ||||||||| | ||||| || || | || || ||| || |||| | ||| || Sbjct 2185 CAGGCATCCTTGAAGAGCATATACGGGTTGCCAGTTTCCACCTGCGACTCAATAATGGCA 2244 Query 114647 TTCCA-GACATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGT 114705 ||| | | | | || | || || ||| || || ||||| | |||||| || || Sbjct 2245 AACCACAAGGACTGAGCCTTG-ACCGTTCGGTTCGCACGACCCTCTTGCTCGTATTTAGT 2303 Query 114706 GTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCA 114765 ||| || || || || || ||| | | || || || || || | ||||| Sbjct 2304 GTACAGCTTCTCGAATTCATCGCCCCAGACATCGTGCAGGCCCGGGCATTTGTGCGGGCA 2363 Query 114766 GAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAG 114825 | || ||||| | || |||| || || ||||||||||| || || ||||| || Sbjct 2364 CATCAGCGACCAATTCTCATTGGCCTCGACGCGTTTCATGAAGAGATCGGGTATCCAAAG 2423 Query 114826 AGCTGAGAAGAGATCCCGACAGCGA-GCTTCTTCATCCCCCTGATTGAGACGCAACTCCA 114884 || | || ||||| || |||| || || | | || || || | | |||| Sbjct 2424 GGCGTAAAACAGATCGCGGGCGCGATTCTCCTCCTTGCCAGTGTTTTTCTTG-AGTTCCA 2482 Query 114885 AAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACG-- 114942 ||| || | || ||||| |||||| || |||||||| | || | | || ||| Sbjct 2483 GAAACTCAAAGACATCCGAGTGCCAGGGCTCCAGGTAAATGGCAAAGGCACCGGGACGCT 2542 Query 114943 -ACGACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGA 115001 | ||| |||| | ||||| | || || || || | ||||| |||| | Sbjct 2543 TGCCGCCACCCTGATCCACATAGCGTGCCACATTGTTGAAGACCCTCAGCATGGGAACTA 2602 Query 115002 TACCATCAGATTGGCCATTTGTCCCCCGAAT--ACGAGACTTATTGGCTCTGACATCATG 115059 |||| || |||||| || || | ||| | | | || || || | || ||| Sbjct 2603 GGCCATTGGAAGTGCCATTCGTGCCGCAAATAGAGGTGCCT--TTTGCCCGGATGCAATG 2660 Query 115060 GATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCC 115119 | | || ||||| || |||||| | || ||||| ||||| | || || | Sbjct 2661 AACATTCAGTCCAATGCCACCTGCCGATTTCGAGATCATGGCGCAGT--GTTCCACCGAT 2718 Query 115120 GT--AGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGT 115177 | |||| || |||||||||||| || | | | | |||||| ||| |||| || Sbjct 2719 TTAAAGATGCCCTCGATCGAGTCAGCCGTCATGGTCAAAAGGAAACAGGAAGACAGCTGC 2778 Query 115178 GGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGGGAC 115237 || | ||| ||||| || || ||||| | |||||| |||| | | | ||| Sbjct 2779 GGGCGATTTGTGGCAGCGGCAAAAAGCGTTGGCGATGCGTGGGTGAAGAATCGCTCAGAC 2838 Query 115238 ATCTTATCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACC 115297 | | |||||| |||| | | || ||| || || || || || || || | || Sbjct 2839 AAAAGGTTGTAGGTTTCCACGGCCGCATCAATATCCTCTCCATGGATTCCTATTGCCACG 2898 Query 115298 CGCATAAACATGTATTGGGG 115317 ||||| ||||||| ||| || Sbjct 2899 CGCATCAACATGTGTTGCGG 2918 >seq8501 Length=20033 Score = 147 bits (162), Expect = 3e-30 Identities = 884/1401 (63%), Gaps = 30/1401 (2%) Strand=Plus/Minus Query 113933 CGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGG 113992 ||||| ||| || || || || || ||||| || | || ||||| |||| ||||| Sbjct 2423 CGTCTGGTATAAATGTTCGTGGTATAGGGCTCGAAAGATTCGTTGTTTCCCATAATTTGA 2364 Query 113993 GCGGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACC---CTTTTCC 114049 || || || || || ||||| || || | || ||| ||| |||| ||| ||||| Sbjct 2363 GCAGTAGACGCAGTAGGCATAGGGGCAACAAGCAGGGAGTTCCGGACACCGTGCTTTT-- 2306 Query 114050 CTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTGCCACATA 114109 | ||| ||||| || | ||| || | | | ||| || | |||||| Sbjct 2305 -TGATGGACTCCTTTAGTTTTTGCCAATCCCACAGGTTCGTTGGCTGTTTGTCCCACATG 2247 Query 114110 TCAAACTGG-AGGATACCTTGGGAGGCTGGCGAT-CCCTCAAATGT-CTCGTATGGGCCC 114166 || |||| || || |||| | | || | |||||| | || ||| || || || Sbjct 2246 TCGTACTGCTAGAATTCCTTTGCTCACGGGGCTTACCCTCATAGGTACTCATAGGGACCT 2187 Query 114167 TCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATG 114226 || |||| ||||| ||| |||| || || ||||| ||| || || || ||||| || Sbjct 2186 TCGACCTGCGCCAGTTCACAGCTGGCTTCCAGGGCACCGTAGTAAATCGTTTCAAATATC 2127 Query 114227 CGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACA 114286 | ||||| ||| || || ||| | | || ||| | ||| || | Sbjct 2126 TGCTGATTCAAAAGACCGGCTTCTTCACTTTCATATGGGAATCGCATGAGAATCAAGGCG 2067 Query 114287 TCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCG 114346 || |||| ||| || ||||||| ||| | || |||||||||| ||| || || || Sbjct 2066 TCAGCGAAACCCTGAACACCGATGCCCACGGGACGATGTCTCAAATTGGATTTCTTTGCC 2007 Query 114347 GTCTCC-ACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTT 114405 ||| | ||||||||| || |||| || | | | || ||||||||||| || ||| Sbjct 2006 -TCTGGGAGGGGATAAAAGTTGATATCAATTATCTTGTTGAGATTTTTGGTAACCGTCTT 1948 Query 114406 TGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGG 114465 || | ||| | ||| || | | ||||||| | |||| ||||| || | Sbjct 1947 GGTAACTTCCTTAAGTTTCTGGAAATCAAATTTTT---TCTCGGGTGTGACAAACATGTT 1891 Query 114466 AAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAAT 114525 ||| ||||| || ||||| || ||||| | |||||||| | || || | || Sbjct 1890 AAGAGCGATGGATGCCAGGTTGCACACTGCAATCTCATCCGGCGAGGAATATTCAACGAT 1831 Query 114526 TTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTT 114585 ||| || ||||| || | |||||||||||| | ||||| || || || |||| Sbjct 1830 TTCTGTGCACAAGTTGCTGCACTTAATGGTGCCAACGTTCTGCTGGTTGCTTTTCCTGTT 1771 Query 114586 ACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGC 114645 || ||||||||| | ||||| || || | || || ||| || |||| | ||| || Sbjct 1770 GCAGGCATCCTTGAAGAGCATATACGGGTTGCCAGTTTCCACCTGCGACTCAATAATGGC 1711 Query 114646 CTTCCA-GACATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTG 114704 ||| | | | | || | || || ||| || || ||||| | |||||| || | Sbjct 1710 AAACCACAAGGACTGAGCCTTG-ACCGTTCGGTTCGCACGACCCTCTTGCTCGTATTTAG 1652 Query 114705 TGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGC 114764 |||| || || || || || ||| | | || || || || || | |||| Sbjct 1651 TGTACAGCTTCTCGAATTCATCGCCCCAGACATCGTGCAGGCCCGGGCATTTGTGCGGGC 1592 Query 114765 AGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGA 114824 | | || ||||| | || |||| || || ||||||||||| || || ||||| | Sbjct 1591 ACATCAGCGACCAATTCTCATTGGCCTCGACGCGTTTCATGAAGAGATCGGGTATCCAAA 1532 Query 114825 GAGCTGAGAAGAGATCCCGACAGCGA-GCTTCTTCATCCCCCTGATTGAGACGCAACTCC 114883 | || | || ||||| || |||| || || | | || || || | | ||| Sbjct 1531 GGGCGTAAAACAGATCGCGGGCGCGATTCTCCTCCTTGCCAGTGTTT--TTCTGAGTTCC 1474 Query 114884 AAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACG- 114942 | ||| || | || ||||| |||||| || |||||||| | || | | || ||| Sbjct 1473 AGAAACTCAAAGACATCCGAGTGCCAGGGCTCCAGGTAAATGGCAAAGGCACCGGGACGC 1414 Query 114943 --ACGACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATG 115000 | ||| |||| | ||||| | || || || || | ||||| |||| Sbjct 1413 TTGCCGCCACCCTGATCCACATAGCGTGCCACATTGTTGAAGACCCTCAGCATGGGAACT 1354 Query 115001 ATACCATCAGATTGGCCATTTGTCCCCCGAAT--ACGAGACTTATTGGCTCTGACATCAT 115058 | |||| || |||||| || || | ||| | | | || || || | || || Sbjct 1353 AGGCCATTGGAAGTGCCATTCGTGCCGCAAATAGAGGTGCCT--TTTGCCCGGATGCAAT 1296 Query 115059 GGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGC 115118 | | | || ||||| || |||||| | || ||||| ||||| | || || | Sbjct 1295 GAACATTCAGTCCAATGCCACCTGCCGATTTCGAGATCATGGCGCAGT--GTTCCACCGA 1238 Query 115119 CGT--AGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTG 115176 | |||| || |||||||||||| || | | | | |||||| ||| |||| || Sbjct 1237 TTTAAAGATGCCCTCGATCGAGTCAGCCGTCATGGTCAAAAGGAAACAGGAAGACAGCTG 1178 Query 115177 TGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGGGA 115236 || | ||| ||||| || || ||||| | |||||| |||| | | | || Sbjct 1177 CGGGCGATTTGTGGCAGCGGCAAAAAGCGTTGGCGATGCGTGGGTGAAGAATCGCTCAGA 1118 Query 115237 CATCTTATCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGAC 115296 || | |||||| |||| | | || ||| || || || || || || || | || Sbjct 1117 CAAAAGGTTGTAGGTTTCCACGGCCGCATCAATATCCTCTCCATGGATTCCTATTGCCAC 1058 Query 115297 CCGCATAAACATGTATTGGGG 115317 ||||| ||||||| ||| || Sbjct 1057 GCGCATCAACATGTGTTGCGG 1037 >seq22136 Length=515022 Score = 141 bits (156), Expect = 1e-28 Identities = 286/420 (68%), Gaps = 6/420 (1%) Strand=Plus/Plus Query 125758 GTAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCAT 125817 ||| || || ||| ||||||||||||||| ||||| ||||||| | ||| ||||||| Sbjct 289636 GTACTCGCCCACCTTCTTCTCGAAGAAGTTGGTCTTGCCGTCCAGGGAGATCATCTCCAT 289695 Query 125818 AAAATCAAATGGGTTCTTTGAGTTCCAAATTGTTGGCAC-CCCAATCTGTTTGAGGAGAC 125876 || | || |||||||| | ||| | || || || |||||| | || | || Sbjct 289696 GAAGTTGAACGGGTTCTTGGTGTTGTAGATCTTTCCAACGCCCAAT-TCCACCAGCAAAC 289754 Query 125877 GATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTAC 125936 | |||| ||| |||||||||||| ||||| || ||||||| || || ||||| Sbjct 289755 GGTCCGCCACGAACTCAATGTACTGCGACATGAGGTCGCAGTTCATGCCAATAAGGTTTA 289814 Query 125937 ATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACGATGGCGT 125996 || || || || || |||| ||| |||||| |||| || || || | ||| || Sbjct 289815 CGGGCAGGGCATCGGTGAGGAACTCCTGCTCAATGGCCACCGCATCACGGATGATCTCGA 289874 Query 125997 GAATGGTGTCCACCCCAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACGGCAAACTCTT 126056 ||| || || |||| | || | || ||| | |||||| || || Sbjct 289875 TGATGCGCTCGCGCCTGGGTCGCTGAACCAGATGCTGGAACATCAGCACGGCGAAGTCAC 289934 Query 126057 GGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGAC 126116 ||| | |||||||| |||||||| ||||| || |||||| ||| || ||||| | || Sbjct 289935 AGTGCAATCCCTCGTCCCGGGAGATCAGTTCGTTGGAGAAGGTCAGGCCCGGCATCAAAC 289994 Query 126117 CCCGCTTCTTCAACCAGAAAAT--CGCACAAAATGAACCCGAGAAGAAGATTCCCTCCAC 126174 | || ||||| | ||||||||| | ||| || || ||||||||| |||||||| Sbjct 289995 CGCGTTTCTTTAGCCAGAAAATGGAGGCGAAACTG--CCGCTGAAGAAGATGCCCTCCAC 290052 >seq20124 Length=133112 Score = 104 bits (114), Expect = 3e-17 Identities = 169/241 (70%), Gaps = 2/241 (1%) Strand=Plus/Plus Query 171907 ATCTTTGCCACCCATGAGACGCGTCCCAAATTGACCACACGGTTCAAGGAGATTGATATT 171966 ||||||||||||| | | ||| || || || ||||| | ||||| || |||||||| || Sbjct 43836 ATCTTTGCCACCCGTCAAACGAGTACCGAACTGACCGCGTGGTTCCAGCAGATTGATGTT 43895 Query 171967 GTTTGAACCCATGTAGTCATTGGCCAACTTGACAATCGT-ATCCGCGAGGGAGACTTCAC 172025 ||||| |||| ||| | ||| | || ||||| || ||| || | ||||| || | Sbjct 43896 GTTTGCGCCCACAAAGTTCTGGGCGAGATTCACAATGGTCATCTGC-AACGAGACCTCGC 43954 Query 172026 CGTGATGGTAGGCCGACTTGTCCGCGACATACGCCGCCAACTGTGCCACCTTCATCTCAT 172085 |||| |||||||| ||| | || || || | | | | ||| || ||||||| ||| Sbjct 43955 CGTGGTGGTAGGCGGACATCTCGGCCACCGATCCGGATAGCTGGGCGACCTTCACCTCGC 44014 Query 172086 CCTTGAGGTTCTTGTGGAAGCACGCATACATGACCTTTCTCTGTGAAGGCTTGAGGCCGT 172145 |||| |||| | | |||||| | |||| ||||| | ||| ||||| || || | Sbjct 44015 GCTTGTCGTTCCTCTTGAAGCAGGTGAACATTACCTTGCGCTGACCCGGCTTAAGTCCAT 44074 Query 172146 C 172146 | Sbjct 44075 C 44075 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597183212352520