Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20rhopaloa_20[refseq_20GCF_5F000236305.1_202013-02-22]
22,819 sequences; 197,375,704 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq5502 129 6e-25
seq22266 123 2e-23
seq1813 111 2e-19
seq22190 109 5e-19
seq8502 109 5e-19
seq8501 107 2e-18
seq20501 104 2e-17
seq22228 100 3e-16
>seq5502
Length=68615
Score = 129 bits (142), Expect = 6e-25
Identities = 152/206 (74%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 64241 TGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGC 64300
|||| || ||||| || || |||||||| || | | ||| || | ||||||||||||
Sbjct 7212 TGAAGGGTGGATTCCTTCTGGATGTTGTAGTCGGAAAGGGTTCGTCCATCTTCAAGCTGC 7271
Query 64301 TTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTT 64360
||||||||| | || || ||||||||||| || ||||| || || || || || || ||
Sbjct 7272 TTGCCGGCAAAGATCAGACGCTGCTGGTCTGGGGGAATGCCCTCCTTATCCTGAATCTTG 7331
Query 64361 TGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTC 64420
||||||| ||| | ||||| | ||||| || | ||| | ||||||||| |||
Sbjct 7332 GCCTTTACATTCTCGATCGTATCGGAAGGCTCCACCTCCAAAGTAATGGTCTTGCCAGTC 7391
Query 64421 AAAGTTTTTACGAAAATTTGCATTTT 64446
|| || || || || || ||||||||
Sbjct 7392 AATGTCTTCACAAAGATCTGCATTTT 7417
Score = 105 bits (116), Expect = 7e-18
Identities = 145/203 (71%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 64241 TGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGC 64300
|||| || ||||| || || |||||||| || | | ||| || | ||||||||||||
Sbjct 6072 TGAAGGGTGGATTCCTTCTGGATGTTGTAGTCGGAAAGGGTTCGTCCATCTTCAAGCTGC 6131
Query 64301 TTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTT 64360
||||||||| | || || |||||||| || || ||||| || || || || || || ||
Sbjct 6132 TTGCCGGCAAAGATCAGACGCTGCTGATCTGGGGGAATACCCTCCTTGTCCTGGATCTTG 6191
Query 64361 TGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTC 64420
||| ||| ||| | || || | ||||| || | || | ||| ||||| |||
Sbjct 6192 GCCTTCACATTCTCGATCGTGTCGGATGGCTCCACCTCAAGGGTAATGGTTTTGCCAGTC 6251
Query 64421 AAAGTTTTTACGAAAATTTGCAT 64443
| || || ||||| ||||||||
Sbjct 6252 AGGGTCTTCACGAAGATTTGCAT 6274
Score = 104 bits (114), Expect = 2e-17
Identities = 141/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
|| || || || || ||||| ||||| | | ||||| | ||||| | ||||||||||
Sbjct 5850 GTGGACTCCTTCTGGATGTTATAATCGGACAGAGTGCGTCCATCTTCCAACTGCTTGCCG 5909
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366
|| | || | |||||||| || || |||||||| || || || || || || |||
Sbjct 5910 GCGAAGATCAAACGCTGCTGATCTGGGGGAATTCCCTCCTTGTCCTGGATCTTGGCCTTC 5969
Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426
|| ||| | |||||| || || ||||| | || | ||| || |||||||| ||
Sbjct 5970 ACGTTCTCAATGGTATCAGAGGGTTCGACTTCCAAGGTGATGGTTTTTCCGGTCAAGGTC 6029
Query 64427 TTTACGAAAATTTGCAT 64443
|||||||| ||||||||
Sbjct 6030 TTTACGAAGATTTGCAT 6046
Score = 91.5 bits (100), Expect = 1e-13
Identities = 142/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 64241 TGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGC 64300
|||| ||||| || ||||| ||||||||||| | | || || |||| || || |||
Sbjct 6756 TGAAGGGTCGACTCCTTTTGGATGTTGTAATCAGACAACGTACGTCCGTCCTCCAGTTGC 6815
Query 64301 TTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTT 64360
||||||||| | || | |||||||| || || ||||| || || || || || || ||
Sbjct 6816 TTGCCGGCAAAGATTAATCGCTGCTGATCTGGGGGAATACCCTCCTTGTCCTGGATCTTG 6875
Query 64361 TGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTC 64420
||| ||| ||| | || || | || || || | || | ||| ||||| |||
Sbjct 6876 GCCTTCACATTCTCGATCGTGTCGGATGGCTCGACCTCAAGGGTAATGGTTTTGCCAGTC 6935
Query 64421 AAAGTTTTTACGAAAATTTGCAT 64443
| || || ||||| ||||||||
Sbjct 6936 AGGGTCTTCACGAAGATTTGCAT 6958
>seq22266
Length=384576
Score = 123 bits (136), Expect = 2e-23
Identities = 164/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| || |||| | ||||| ||||||| ||||| || || || |||||||| || |
Sbjct 109156 ACCACCACGCAGGCGGAGCACCAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGA 109215
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| |||||| | || || |||||||||||||| | || || |||||||| || || ||
Sbjct 109216 CAGGGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGGGG 109275
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
||| || || || || || || || ||| ||| ||| | || || | |||||
Sbjct 109276 AATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATGGTGTCCGAAGGCTCCAC 109335
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|| | || | |||||||||||| | ||||| ||||||||||||||
Sbjct 109336 CTCCAAGGTGATGGTCTTGCCGGTGAGGGTTTTCACGAAAATTTGCAT 109383
>seq1813
Length=4749
Score = 111 bits (122), Expect = 2e-19
Identities = 533/837 (64%), Gaps = 14/837 (2%)
Strand=Plus/Plus
Query 153672 TTGTCCACGGTAAATGCGATTGCATCCGCGGCCGGTTTAGTTCGCAAATAATACATGCCG 153731
|| || ||||| || ||||||| ||||| || || || |||| || ||||| |||
Sbjct 1155 TTATCTACGGTGAACTGAATTGCATTGGCGGCTGGCTTTGTGCGCAGGTAGTACATTCCG 1214
Query 153732 GTTTTCAAACCACGTTTCCAAGTGTGCATGTGCACGCTAGTTAATAACGCGAAACTGGGC 153791
|| || | ||| |||||||| || | ||| | | || ||| | | | |||
Sbjct 1215 GTCTTAAGTCCAGCTTTCCAAGAGTAAAAGTGAATGGACGTCAATTTTCCATAGTTTGGC 1274
Query 153792 TGCGCTATAAACACGTTAAACGACTGGCTCTGATCGATGAAAGCGCCGCGATCGGCCGCC 153851
| || | | | || |||||||| || || || || || || || ||||| || |||
Sbjct 1275 TCAGCCACATGAATATTGAACGACTGACTTTGGTCTATAAACGCCCCACGATCAGCGGCC 1334
Query 153852 ATGTCAATCAAGTTTTT-ACTGCTCATTTCCCACACAGTTTTGTAGACGGCTTTAATGTC 153910
|| | ||| | || |||| |||||||||||||||||||| | | || |
Sbjct 1335 ATTTTAATTGTGGACTTCACTGAG-ATTTCCCACACAGTTTTGTAAAGATCGCGAACTTT 1393
Query 153911 GTCGGGTATGCGATCAATTTTCTGCACACTGCCTCCGGCCGCTATAATGGAATTGCGCAT 153970
| ||| ||| ||||| || | ||| | | | || || || |||
Sbjct 1394 CTGGGGAATGGTCTCAATACCTTGGATGGAGCCCCTGCTGGAAATGATCTGGTTCTTCAT 1453
Query 153971 GTGGTCGTCGTACAAATTTAGTCGACATAAATCT-TCAACCAAGTGCTGGTTAATTACTT 154029
|| ||| || |||| | || | ||| || ||||| || || ||||| | || |
Sbjct 1454 GTCGTCATCCCACAAGTCGAGCTCAGTTAAGTCCCTCAACAAA-TGATGGTTGACCACCT 1512
Query 154030 GAAAATCGCCGGCCAATACGCGGCGCACATACAAATTGCTGGTGAACGGCTCGAACGATT 154089
| || || || | || || || | ||| | || |||| | |||||||| ||||
Sbjct 1513 GGAATTCACCAGACAGAACTCGTCTGGTATAAATGTTCGTGGTATAGGGCTCGAAAGATT 1572
Query 154090 CGTTGTTGCCTAATATTTGAGCTGTAGTTGCTGTGGGCATATACGCCACCAACAAAGAGT 154149
||||||| || | |||||||| |||| || || |||||| || || | || ||||
Sbjct 1573 CGTTGTTTCCCATAATTTGAGCAGTAGACGCAGTAGGCATAGGGGCAACAAGCAGGGAGT 1632
Query 154150 TTCGCAAACCGTGTTTTGCAATGCGCAATTTTAAATCTGCCCAATTCCACAAGTTGGTAG 154209
| || | |||||| ||| ||| | |||| | | ||||| ||||| ||| || |
Sbjct 1633 TCCGGACACCGTGCTTTTTGATGGACTCCTTTAGTTTTTGCCAATCCCACAGGTTCGTTG 1692
Query 154210 GTTGCACGTTCCACATGTCGTATTGCAAAACACCCAAACTCGCCGGACTGTCACT-ATAA 154268
| || || |||||||||||| |||| || || ||| | || || || || |||
Sbjct 1693 GCTGTTTGTCCCACATGTCGTACTGCAGAATTCCTTTGCTCACGGGGCT-TCCCTCATAG 1751
Query 154269 CTAGAGTACGGCCCGTTCAGTTTTGCCAAGTCGCAACTGGCTTCTAACGCCGCATAGTAT 154328
| || || || | | | |||| || || |||||||| | || | |||||
Sbjct 1752 GTCTCATAGGGACCTTCGACCTGCGCCAGTTCACAGCTGGCTTCCAGGGCACCGTAGTAA 1811
Query 154329 ACGGTTTCGGCAATTTGTTTGTTTAACATTTTGGCTTTGTCACTTTCGTACGGCAATCCC 154388
| ||||| || || | || || | ||| | |||||||| || || |||| |
Sbjct 1812 ATCGTTTCAAATATCTGCTGATTCAAAAGACCGGCCTCTTCACTTTCATATGGGAATCGC 1871
Query 154389 AATATACAAAAAGCATCGGCGAGCCCTTGAATGCCCACTCCAACGGGTCTGTGTTTTAAA 154448
| | | || || || |||| || |||| || | || ||||| | ||| | |||
Sbjct 1872 ATGAGAATCAAGGCGTCAGCGAAACCCTGAACACCGATGCCCACGGGACGATGTCTCAAA 1931
Query 154449 TTCGA-TTCTTTGGCAGCCTC---CAGAGGATAATAATTGATATCGATAATTTTATT 154501
|| || |||||| ||||| || |||||| | |||||||| || || || ||
Sbjct 1932 TTGGATTTCTTT----GCCTCTGGGAGGGGATAAAAGTTGATATCAATTATCTTGTT 1984
>seq22190
Length=927835
Score = 109 bits (120), Expect = 5e-19
Identities = 144/200 (72%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
|| || || || || |||||||| || | | |||||| | ||||| ||||| || |||
Sbjct 837266 GTAGACTCCTTCTGGATGTTGTAGTCGGACAAGGTGCGTCCATCTTCCAGCTGTTTTCCG 837207
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366
|| | || | ||||||||||| || |||||||| || || || || || || |||
Sbjct 837206 GCGAAGATCAATCGCTGCTGGTCTGGGGGAATTCCCTCCTTGTCCTGGATCTTGGCCTTC 837147
Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426
|| ||| | ||||| | || || || | ||| | ||||||||||||||||||
Sbjct 837146 ACGTTCTCAATGGTATCGGAAGGCTCAACCTCCAAAGTGATGGTCTTGCCGGTCAAAGTC 837087
Query 64427 TTTACGAAAATTTGCATTTT 64446
|| || ||||||||||| ||
Sbjct 837086 TTCACAAAAATTTGCATGTT 837067
Score = 95.1 bits (104), Expect = 1e-14
Identities = 139/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
|| || || || || |||||||| || | | |||||| |||| || | |||||||||
Sbjct 837721 GTGGACTCCTTCTGGATGTTGTAGTCGGACAAGGTGCGTCCGTCCTCCAACTGCTTGCCA 837662
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366
||| | || | ||||||||||| || ||||| ||||| || || || ||||| |||
Sbjct 837661 GCAAAGATCAAACGCTGCTGGTCTGGGGGAATGCCTTCCTTGTCCTGGATTTTAGCCTTC 837602
Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426
|| ||| | ||||| || || || || | || | ||||||||| || | |||
Sbjct 837601 ACGTTCTCAATGGTATCGGAGGGCTCGACCTCAAGGGTGATGGTCTTGCCAGTGAGAGTC 837542
Query 64427 TTTACGAAAATTTGCAT 64443
|| || || || |||||
Sbjct 837541 TTGACAAAGATCTGCAT 837525
Score = 91.5 bits (100), Expect = 1e-13
Identities = 139/197 (71%), Gaps = 1/197 (1%)
Strand=Plus/Minus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
|| || || || || |||||||| || | | |||||| |||| || | |||||||||
Sbjct 837493 GTAGACTCCTTCTGGATGTTGTAGTCGGACAAGGTGCGTCCGTCCTCCAACTGCTTGCCA 837434
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366
||| | || | ||||||||||| || ||||| ||||| || || || ||||| |||
Sbjct 837433 GCAAAGATCAAACGCTGCTGGTCTGGGGGAATGCCTTCCTTGTCCTGGATTTTAGCCTTC 837374
Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426
|| ||| | ||||| || || || || | || | ||||||||| || | |||
Sbjct 837373 ACGTTCTCGATGGTATCGGAGGGCTCGACCTC-AAGGTGATGGTCTTGCCAGTGAGAGTC 837315
Query 64427 TTTACGAAAATTTGCAT 64443
|| || || || |||||
Sbjct 837314 TTGACAAAGATCTGCAT 837298
>seq8502
Length=4749
Score = 109 bits (120), Expect = 5e-19
Identities = 534/838 (64%), Gaps = 15/838 (2%)
Strand=Plus/Plus
Query 153672 TTGTCCACGGTAAATGCGATTGCATCCGCGGCCGGTTTAGTTCGCAAATAATACATGCCG 153731
|| || ||||| || ||||||| ||||| || || || |||| || ||||| |||
Sbjct 1155 TTATCTACGGTGAACTGAATTGCATTGGCGGCTGGCTTTGTGCGCAGGTAGTACATTCCG 1214
Query 153732 GTTTTCAAACCACGTTTCCAAGTGTGCATGTGCACGCTAGTTAATAACGCGAAACTGGGC 153791
|| || | ||| |||||||| || | ||| | | || ||| | | | |||
Sbjct 1215 GTCTTAAGTCCAGCTTTCCAAGAGTAAAAGTGAATGGACGTCAATTTTCCATAGTTTGGC 1274
Query 153792 TGCGCTATAAACACGTTAAACGACTGGCTCTGATCGATGAAAGCGCCGCGATCGGCCGCC 153851
| || | | | || |||||||| || || || || || || || ||||| || |||
Sbjct 1275 TCAGCCACATGAATATTGAACGACTGACTTTGGTCTATAAACGCCCCACGATCAGCGGCC 1334
Query 153852 ATGTCAATCAAGTTTTT-ACTGCTCATTTCCCACACAGTTTTGTAGACGGCTTTAATGTC 153910
|| | ||| | || |||| |||||||||||||||||||| | | || |
Sbjct 1335 ATTTTAATTGTGGACTTCACTGAG-ATTTCCCACACAGTTTTGTAAAGATCGCGAACTTT 1393
Query 153911 GTCGGGTATGCGATCAATTTTCTGCACACTGCCTCCGGCCGCTATAATGGAATTGCGCAT 153970
| ||| ||| ||||| || | ||| | | | || || || |||
Sbjct 1394 CTGGGGAATGGTCTCAATACCTTGGATGGAGCCCCTGCTGGAAATGATCTGGTTCTTCAT 1453
Query 153971 GTGGTCGTCGTACAAATTTAGTCGACATAAATCT-TCAACCAAGTGCTGGTTAATTACTT 154029
|| ||| || |||| | || | ||| || ||||| || || ||||| | || |
Sbjct 1454 GTCGTCATCCCACAAGTCGAGCTCAGTTAAGTCCCTCAACAAA-TGATGGTTGACCACCT 1512
Query 154030 GAAAATCGCCGGCCAATACGCGGCGCACATACAAATTGCTGGTGAACGGCTCGAACGATT 154089
| || || || | || || || | ||| | || |||| | |||||||| ||||
Sbjct 1513 GGAATTCACCAGACAGAACTCGTCTGGTATAAATGTTCGTGGTATAGGGCTCGAAAGATT 1572
Query 154090 CGTTGTTGCCTAATATTTGAGCTGTAGTTGCTGTGGGCATATACGCCACCAACAAAGAGT 154149
||||||| || | |||||||| |||| || || |||||| || || | || ||||
Sbjct 1573 CGTTGTTTCCCATAATTTGAGCAGTAGACGCAGTAGGCATAGGGGCAACAAGCAGGGAGT 1632
Query 154150 TTCGCAAACCGTGTTTTGCAATGCGCAATTTTAAATCTGCCCAATTCCACAAGTTGGTAG 154209
| || | |||||| ||| ||| | |||| | | ||||| ||||| ||| || |
Sbjct 1633 TCCGGACACCGTGCTTTTTGATGGACTCCTTTAGTTTTTGCCAATCCCACAGGTTCGTTG 1692
Query 154210 GTTGCACGTTCCACATGTCGTATTGCAAAACACCCAAACTCGCCGGACTGTCACT-ATAA 154268
| || || |||||||||||| |||| || || ||| | || || || || |||
Sbjct 1693 GCTGTTTGTCCCACATGTCGTACTGCAGAATTCCTTTGCTCACGGGGCT-TCCCTCATAG 1751
Query 154269 CTAGAGTACGGCCCGTTCAGTTTTGCCAAGTCGCAACTGGCTTCTAACGCCGCATAGTAT 154328
| || || || | | | |||| || || |||||||| | || | |||||
Sbjct 1752 GTCTCATAGGGACCTTCGACCTGCGCCAGTTCACAGCTGGCTTCCAGGGCACCGTAGTAA 1811
Query 154329 ACGGTTTCGGCAATTTGTTTGTT-TAACATTTTGGCTTTGTCACTTTCGTACGGCAATCC 154387
| ||||| || || | || || | ||||| |||||||| || || ||||
Sbjct 1812 ATCGTTTCAAATATCTGCTGATTCAAAAAGACCGGCTTCTTCACTTTCATATGGGAATCG 1871
Query 154388 CAATATACAAAAAGCATCGGCGAGCCCTTGAATGCCCACTCCAACGGGTCTGTGTTTTAA 154447
|| | | || || || |||| || |||| || | || ||||| | ||| | ||
Sbjct 1872 CATGAGAATCAAGGCGTCAGCGAAACCCTGAACACCGATGCCCACGGGACGATGTCTCAA 1931
Query 154448 ATTCGA-TTCTTTGGCAGCCTC---CAGAGGATAATAATTGATATCGATAATTTTATT 154501
||| || |||||| ||||| || |||||| | |||||||| || || || ||
Sbjct 1932 ATTGGATTTCTTT----GCCTCTGGGAGGGGATAAAAGTTGATATCAATTATCTTGTT 1985
>seq8501
Length=20033
Score = 107 bits (118), Expect = 2e-18
Identities = 534/839 (64%), Gaps = 15/839 (2%)
Strand=Plus/Minus
Query 153672 TTGTCCACGGTAAATGCGATTGCATCCGCGGCCGGTTTAGTTCGCAAATAATACATGCCG 153731
|| || ||||| || ||||||| ||||| || || || |||| || ||||| |||
Sbjct 2801 TTATCTACGGTGAACTGAATTGCATTGGCGGCTGGCTTTGTGCGCAGGTAGTACATTCCG 2742
Query 153732 GTTTTCAAACCACGTTTCCAAGTGTGCATGTGCACGCTAGTTAATAACGCGAAACTGGGC 153791
|| || | ||| |||||||| || | ||| | | || ||| | | | |||
Sbjct 2741 GTCTTAAGTCCAGCTTTCCAAGAGTAAAAGTGAATGGACGTCAATTTTCCATAGTTTGGC 2682
Query 153792 TGCGCTATAAACACGTTAAACGACTGGCTCTGATCGATGAAAGCGCCGCGATCGGCCGCC 153851
| || | | | || |||||||| || || || || || || || ||||| || |||
Sbjct 2681 TCAGCCACATGAATATTGAACGACTGACTTTGGTCTATAAACGCCCCACGATCAGCGGCC 2622
Query 153852 ATGTCAATCAAGTTTTT-ACTGCTCATTTCCCACACAGTTTTGTAGACGGCTTTAATGTC 153910
|| | ||| | || |||| |||||||||||||||||||| | | || |
Sbjct 2621 ATTTTAATTGTGGACTTCACTGAG-ATTTCCCACACAGTTTTGTAAAGATCGCGAACTTT 2563
Query 153911 GTCGGGTATGCGATCAATTTTCTGCACACTGCCTCCGGCCGCTATAATGGAATTGCGCAT 153970
| ||| ||| ||||| || | ||| | | | || || || |||
Sbjct 2562 CTGGGGAATGGTCTCAATACCTTGGATGGAGCCCCTGCTGGAAATGATCTGGTTCTTCAT 2503
Query 153971 GTGGTCGTCGTACAAATTTAGTCGACATAAATCT-TCAACCAAGTGCTGGTTAATTACTT 154029
|| ||| || |||| | || | ||| || ||||| || || ||||| | || |
Sbjct 2502 GTCGTCATCCCACAAGTCGAGCTCAGTTAAGTCCCTCAACAAA-TGATGGTTGACCACCT 2444
Query 154030 GAAAATCGCCGGCCAATACGCGGCGCACATACAAATTGCTGGTGAACGGCTCGAACGATT 154089
| || || || | || || || | ||| | || |||| | |||||||| ||||
Sbjct 2443 GGAATTCACCAGACAGAACTCGTCTGGTATAAATGTTCGTGGTATAGGGCTCGAAAGATT 2384
Query 154090 CGTTGTTGCCTAATATTTGAGCTGTAGTTGCTGTGGGCATATACGCCACCAACAAAGAGT 154149
||||||| || | |||||||| |||| || || |||||| || || | || ||||
Sbjct 2383 CGTTGTTTCCCATAATTTGAGCAGTAGACGCAGTAGGCATAGGGGCAACAAGCAGGGAGT 2324
Query 154150 TTCGCAAACCGTGTTTTGCAATGCGCAATTTTAAATCTGCCCAATTCCACAAGTTGGTAG 154209
| || | |||||| ||| ||| | |||| | | ||||| ||||| ||| || |
Sbjct 2323 TCCGGACACCGTGCTTTTTGATGGACTCCTTTAGTTTTTGCCAATCCCACAGGTTCGTTG 2264
Query 154210 GTTGCACGTTCCACATGTCGTATTGC-AAAACACCCAAACTCGCCGGACTGTCACT-ATA 154267
| || || |||||||||||| ||| | || || ||| | || || | || |||
Sbjct 2263 GCTGTTTGTCCCACATGTCGTACTGCTAGAATTCCTTTGCTCACGGGGCTTACCCTCATA 2204
Query 154268 ACTA-GAGTACGGCCCGTTCAGTTTTGCCAAGTCGCAACTGGCTTCTAACGCCGCATAGT 154326
|| || || || | | | |||| || || |||||||| | || | ||||
Sbjct 2203 GGTACTCATAGGGACCTTCGACCTGCGCCAGTTCACAGCTGGCTTCCAGGGCACCGTAGT 2144
Query 154327 ATACGGTTTCGGCAATTTGTTTGTTTAACATTTTGGCTTTGTCACTTTCGTACGGCAATC 154386
| | ||||| || || | || || | ||||| |||||||| || || ||||
Sbjct 2143 AAATCGTTTCAAATATCTGCTGATTCAAAAGACCGGCTTCTTCACTTTCATATGGGAATC 2084
Query 154387 CCAATATACAAAAAGCATCGGCGAGCCCTTGAATGCCCACTCCAACGGGTCTGTGTTTTA 154446
|| | | || || || |||| || |||| || | || ||||| | ||| | |
Sbjct 2083 GCATGAGAATCAAGGCGTCAGCGAAACCCTGAACACCGATGCCCACGGGACGATGTCTCA 2024
Query 154447 AATTCGA-TTCTTTGGCAGCCTC---CAGAGGATAATAATTGATATCGATAATTTTATT 154501
|||| || |||||| ||||| || |||||| | |||||||| || || || ||
Sbjct 2023 AATTGGATTTCTTT----GCCTCTGGGAGGGGATAAAAGTTGATATCAATTATCTTGTT 1969
>seq20501
Length=31302
Score = 104 bits (114), Expect = 2e-17
Identities = 166/234 (71%), Gaps = 6/234 (3%)
Strand=Plus/Plus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| || |||| | ||||| | || | || || || || |||||||| || || |
Sbjct 11116 ACCACCACGCAGACGCAGCACCAAGTGCAAAGTGGACTCCTTCTGAATGTTATAGTCAGA 11175
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
|| ||| || | ||||| ||||||||||| || | || || |||||||| || |||||
Sbjct 11176 GAGGGTACGGCCATCTTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCTGGAGG 11235
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCG--TC 64392
|||||||||||| || || | | || ||||| ||| || | || | ||| || ||
Sbjct 11236 AATTCCTTCTTTGTCCTG-AATCTTGGCTTTGACATTTTCGATAGTGT--CCGACGGTTC 11292
Query 64393 CACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446
|| || | ||| | ||||||||| || | || || ||||| || ||||| ||
Sbjct 11293 GACCTCAAGAGTGATGGTCTTGCCCGTGAGGGTCTTAACGAAGATCTGCATCTT 11346
>seq22228
Length=358660
Score = 100 bits (110), Expect = 3e-16
Identities = 225/336 (67%), Gaps = 9/336 (3%)
Strand=Plus/Plus
Query 115361 GGACTGCACGGTTTTCATGTTCACGAATTCGGCGACACTAGCAACGGCTGCACGTCCGCC 115420
|| |||||||| || || || ||||| ||||| |||| | ||||||||||| ||| ||
Sbjct 288014 GGTCTGCACGGATTCCACGTGCACGAGTTCGGTGACAACACCAACGGCTGCATGTCATCC 288073
Query 115421 GGCGAGCATTTCAACCCGTTTAACCAAGATCACGGCGCACCGAACGCACCCGTCCGCCAC 115480
|| ||| ||||| || | | | || |||||||| || || | |||||||
Sbjct 288074 GGGCCGCACTTCAATCCTTACGGCAAGGAGCACGGCGCCCCCGCCGACGAGGACCGCCAC 288133
Query 115481 GTCGGTGATCTGGGCAACGTCGAATCTGCGGGCTTCAACTCGCTCACCGACGTCAACATG 115540
| || |||||||||||| | || | | || | ||| | ||| | |||| |||
Sbjct 288134 CTGGGCGATCTGGGCAACATTGAGGCCACCGG---CGACTGCCCCACGAAGGTCACCATC 288190
Query 115541 ACGAGCGACT---TAATGACGTTGTACGGCCCGAACAGTGTGCTCGGCCGCAGCTTAGTG 115597
|| ||||| || ||| | | |||| | |||| | |||| |||| | | |||
Sbjct 288191 AC---CGACTCGAGGATCACGCTCTTCGGCGCCGACAGCATCATCGGACGCACCGTGGTG 288247
Query 115598 GTGCACGCGGACCGCGACGATCTCGGCCTTACCGATCATCCGCTAAGCAAAACCACGGGT 115657
|| ||||| || ||| ||||||||| || || ||| ||||| |||||||
Sbjct 288248 GTCCACGCCGATGCCGATGATCTCGGCAAGGGCGGCCACGAGCTGAGCAAGTCCACGGGC 288307
Query 115658 AACTCGGGCGGGCGCCTGGCCTGCGGCATCATCGGC 115693
||| | |||| ||| | | |||||| |||| |||
Sbjct 288308 AACGCTGGCGCTCGCATTGGATGCGGCGTCATTGGC 288343
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499502282566360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |