Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20rhopaloa_20[refseq_20GCF_5F000236305.1_202013-02-22]
22,819 sequences; 197,375,704 total letters
Query= NC_011616.1
Length=148634
Score E
Sequences producing significant alignments: (Bits) Value
seq1813 159 3e-34
seq8502 149 6e-31
seq8501 143 3e-29
seq22190 132 5e-26
seq22266 129 6e-25
seq22228 116 4e-21
seq5502 114 1e-20
seq20501 98.7 9e-16
seq22136 91.5 1e-13
>seq1813
Length=4749
Score = 159 bits (176), Expect = 3e-34
Identities = 724/1128 (64%), Gaps = 41/1128 (4%)
Strand=Plus/Plus
Query 146062 TGGTTGACCACCTGAAACTCGCCGGCGAGAACGCGCCTCAGATACACGTTGCTGGTGAAC 146121
|||||||||||||| || || || | ||||| || || ||| | ||| |||| |
Sbjct 1500 TGGTTGACCACCTGGAATTCACCAGACAGAACTCGTCTGGTATAAATGTTCGTGGTATAG 1559
Query 146122 GGCTCGAACGACTCGTTGTTACCGAGTATCTGCGCCGTCGTAGCGGTAGGCATGTACGCC 146181
|||||||| || |||||||| || | || || || || | || |||||||| ||
Sbjct 1560 GGCTCGAAAGATTCGTTGTTTCCCATAATTTGAGCAGTAGACGCAGTAGGCATAGGGGCA 1619
Query 146182 ACCAGCAAAGAGTTTCTCACGCCGTGTCTTTGAATCTTTTCCCGTAGTTTGGACCAATTC 146241
|| |||| ||||| | || ||||| ||| || ||| |||||| ||||| |
Sbjct 1620 ACAAGCAGGGAGTTCCGGACACCGTGCTTTTTGATGGACTCCTTTAGTTTTTGCCAATCC 1679
Query 146242 CACAAATGATCCGTGGGATAGATATTGTAGTTGTCGTAATGCATAGTGCCGCGGAACAGG 146301
|||| | | ||| || | | | | ||||||| |||| | | || | || |
Sbjct 1680 CACA---GGTTCGTTGGCTGTTTGTCCCACATGTCGTACTGCAGAATTCCTTTGCTCACG 1736
Query 146302 GGGCTATTCTCGTACGATTCATAAGGACCGTCGATCTTGGCCAGTTCGCAGCTAGCTTCC 146361
||||| ||| || | ||||| ||||| |||| || |||||||| ||||| ||||||
Sbjct 1737 GGGCTTCCCTCATAGGTCTCATAGGGACCTTCGACCTGCGCCAGTTCACAGCTGGCTTCC 1796
Query 146362 AGAGCCGAAAAGTATATGGTCTCCGCGATCATGTAGTTGACGCTCCTGGCCTCCTCGCTG 146421
|| || |||| || || || ||| | || | | |||||| || ||
Sbjct 1797 AGGGCACCGTAGTAAATCGTTTCAAATATCTGCTGATTCAAAAGACCGGCCTCTTCACTT 1856
Query 146422 TCGTAGGGGATATCG-AGAAGCACAAAGGCGTCGGCGAGACCCTGTATCCCGACACCAAC 146480
|| || |||| |||| | || | |||||||| |||| |||||| | |||| || ||
Sbjct 1857 TCATATGGGA-ATCGCATGAGAATCAAGGCGTCAGCGAAACCCTGAACACCGATGCCCAC 1915
Query 146481 GGGGCGGTGTTTC---TTGTTACTGTTCGCAGCGCCCGCAGTGGGATAGTGGTTGCTGTC 146537
||| || ||| || ||| | || || | | | || |||||| |||| | ||
Sbjct 1916 GGGACGATGTCTCAAATTGGATTTCTTTGC--CTCTGGGAG-GGGATAAAAGTTGATATC 1972
Query 146538 GATGATCTTGTTGAGATTACGCACGACAATTTTCGTCAAACGATTCAG---CAGGACATA 146594
|| |||||||||||||| || | || || | || || | ||| |
Sbjct 1973 AATTATCTTGTTGAGATTTTTGGTAACCGTCTTGGTAACTTCCTTAAGTTTCTGGA---A 2029
Query 146595 GTCAAATGTTTTAGTTTTAACGT-TGACGCACTTGTTGACGGCGATAGAGGCCAAGTTAC 146653
|||||| || || | || |||| || |||| | ||||| || |||| ||| |
Sbjct 2030 ATCAAATTTT----TTCTCGGGTGTGACAAACATGTTAAGAGCGATGGATGCCAGGTTGC 2085
Query 146654 ATACGGCAGTCTCGTCCTTGTCGCAATACTGCACAATCTCGGCGCAGAGGTTGCTGCACT 146713
| || ||| |||| ||| | |||| | || || || | ||| | |||||||||||
Sbjct 2086 ACACTGCAATCTCATCCGGCGAGGAATATTCAACGATTTCTGTGCACAAGTTGCTGCACT 2145
Query 146714 TGATGATGCCCAAAtttttttGGTTACTAAACTTGTTGCAGGGGTCCTTGTAGAGCATGT 146773
| ||| |||| | || | ||||| || | ||||||||| |||||| ||||||| |
Sbjct 2146 TAATGGTGCCAACGTTCTGCTGGTTGCTTTTCCTGTTGCAGGCATCCTTGAAGAGCATAT 2205
Query 146774 ACGGTCCCCCGGTTTCGACATTGGTCTCGACGATGAATCTAAACA-AATCTCTG-GCCTT 146831
|||| || ||||| || | | ||| | ||| | || || || ||| |||||
Sbjct 2206 ACGGGTTGCCAGTTTCCACCTGCGACTCAATAATG--GCAAACCACAAGGACTGAGCCTT 2263
Query 146832 TACTTGTC-TTTCGTACAGTTTATTCTTTTCGTATTTCTCGTACAATATTTCAAAACTAG 146890
|| || |||| || | | | |||||||| ||||| | || || |
Sbjct 2264 GACCGTTCGGTTCGCAC-GACCCTCTTGCTCGTATTTAGTGTACAGCTTCTCGAATTCAT 2322
Query 146891 AACCGTACTCGTCGAGGAGGCCGGGATACTTTTTGGGACAGAACAGCGACCATTCTTTAT 146950
|| | | ||| | ||||| || | || | || || | ||||||||| | | ||
Sbjct 2323 CGCCCCAGACATCGTGCAGGCCCGGGCATTTGTGCGGGCACATCAGCGACCAATTCTCAT 2382
Query 146951 TCTCCTTCACGCGTTCCATAAACAAATCGGGAATCCAAAGGCCCAGCATCAAGTCGCGAG 147010
| ||| ||||||| ||| || | |||||| ||||||||| | | || ||||| |
Sbjct 2383 TGGCCTCGACGCGTTTCATGAAGAGATCGGGTATCCAAAGGGCGTAAAACAGATCGCGGG 2442
Query 147011 CCTTGGCG----TCCTCGGAGCCCATGTTGCGTCTCAAGTT-GAGGACATCGTAAATTTC 147065
| ||| ||||| ||| |||| ||| |||| || | || | | ||
Sbjct 2443 C----GCGATTCTCCTCCTTGCCAGTGTT-TTTCTTGAGTTCCAGAAACTCAAAGACATC 2497
Query 147066 CGGATGCCAAGGCTCCACGTATGCGGCGAGTGCGCCTTTTCGCTTACCG---CCCTGATC 147122
|| ||||| ||||||| ||| ||| | || || ||||| ||| ||||||||
Sbjct 2498 CGAGTGCCAGGGCTCCAGGTAAATGGCAAAGGCACCGGGACGCTTGCCGCCACCCTGATC 2557
Query 147123 GACGTGGCGCACCATGTTATTGAAGACTCGTAACATGGACACGAGGCC 147170
|| | ||| ||| || |||||||| | | ||||| || |||||
Sbjct 2558 CACATAGCGTGCCACATTGTTGAAGACCCTCAGCATGGGAACTAGGCC 2605
>seq8502
Length=4749
Score = 149 bits (164), Expect = 6e-31
Identities = 723/1129 (64%), Gaps = 42/1129 (4%)
Strand=Plus/Plus
Query 146062 TGGTTGACCACCTGAAACTCGCCGGCGAGAACGCGCCTCAGATACACGTTGCTGGTGAAC 146121
|||||||||||||| || || || | ||||| || || ||| | ||| |||| |
Sbjct 1500 TGGTTGACCACCTGGAATTCACCAGACAGAACTCGTCTGGTATAAATGTTCGTGGTATAG 1559
Query 146122 GGCTCGAACGACTCGTTGTTACCGAGTATCTGCGCCGTCGTAGCGGTAGGCATGTACGCC 146181
|||||||| || |||||||| || | || || || || | || |||||||| ||
Sbjct 1560 GGCTCGAAAGATTCGTTGTTTCCCATAATTTGAGCAGTAGACGCAGTAGGCATAGGGGCA 1619
Query 146182 ACCAGCAAAGAGTTTCTCACGCCGTGTCTTTGAATCTTTTCCCGTAGTTTGGACCAATTC 146241
|| |||| ||||| | || ||||| ||| || ||| |||||| ||||| |
Sbjct 1620 ACAAGCAGGGAGTTCCGGACACCGTGCTTTTTGATGGACTCCTTTAGTTTTTGCCAATCC 1679
Query 146242 CACAAATGATCCGTGGGATAGATATTGTAGTTGTCGTAATGCATAGTGCCGCGGAACAGG 146301
|||| | | ||| || | | | | ||||||| |||| | | || | || |
Sbjct 1680 CACA---GGTTCGTTGGCTGTTTGTCCCACATGTCGTACTGCAGAATTCCTTTGCTCACG 1736
Query 146302 GGGCTATTCTCGTACGATTCATAAGGACCGTCGATCTTGGCCAGTTCGCAGCTAGCTTCC 146361
||||| ||| || | ||||| ||||| |||| || |||||||| ||||| ||||||
Sbjct 1737 GGGCTTCCCTCATAGGTCTCATAGGGACCTTCGACCTGCGCCAGTTCACAGCTGGCTTCC 1796
Query 146362 AGAGCCGAAAAGTATATGGTCTCCGCGATCATGT-AGTTGACGCTCCTGGCCTCCTCGCT 146420
|| || |||| || || || ||| | | | | | ||| || || ||
Sbjct 1797 AGGGCACCGTAGTAAATCGTTTCAAATATCTGCTGATTCAAAAAGACCGGCTTCTTCACT 1856
Query 146421 GTCGTAGGGGATATCG-AGAAGCACAAAGGCGTCGGCGAGACCCTGTATCCCGACACCAA 146479
|| || |||| |||| | || | |||||||| |||| |||||| | |||| || |
Sbjct 1857 TTCATATGGGA-ATCGCATGAGAATCAAGGCGTCAGCGAAACCCTGAACACCGATGCCCA 1915
Query 146480 CGGGGCGGTGTTTC---TTGTTACTGTTCGCAGCGCCCGCAGTGGGATAGTGGTTGCTGT 146536
|||| || ||| || ||| | || || | | | || |||||| |||| | |
Sbjct 1916 CGGGACGATGTCTCAAATTGGATTTCTTTGC--CTCTGGGAG-GGGATAAAAGTTGATAT 1972
Query 146537 CGATGATCTTGTTGAGATTACGCACGACAATTTTCGTCAAACGATTCAG---CAGGACAT 146593
| || |||||||||||||| || | || || | || || | |||
Sbjct 1973 CAATTATCTTGTTGAGATTTTTGGTAACCGTCTTGGTAACTTCCTTAAGTTTCTGGA--- 2029
Query 146594 AGTCAAATGTTTTAGTTTTAACGT-TGACGCACTTGTTGACGGCGATAGAGGCCAAGTTA 146652
| |||||| || || | || |||| || |||| | ||||| || |||| |||
Sbjct 2030 AATCAAATTTT----TTCTCGGGTGTGACAAACATGTTAAGAGCGATGGATGCCAGGTTG 2085
Query 146653 CATACGGCAGTCTCGTCCTTGTCGCAATACTGCACAATCTCGGCGCAGAGGTTGCTGCAC 146712
|| || ||| |||| ||| | |||| | || || || | ||| | ||||||||||
Sbjct 2086 CACACTGCAATCTCATCCGGCGAGGAATATTCAACGATTTCTGTGCACAAGTTGCTGCAC 2145
Query 146713 TTGATGATGCCCAAAtttttttGGTTACTAAACTTGTTGCAGGGGTCCTTGTAGAGCATG 146772
|| ||| |||| | || | ||||| || | ||||||||| |||||| |||||||
Sbjct 2146 TTAATGGTGCCAACGTTCTGCTGGTTGCTTTTCCTGTTGCAGGCATCCTTGAAGAGCATA 2205
Query 146773 TACGGTCCCCCGGTTTCGACATTGGTCTCGACGATGAATCTAAACA-AATCTCTG-GCCT 146830
||||| || ||||| || | | ||| | ||| | || || || ||| ||||
Sbjct 2206 TACGGGTTGCCAGTTTCCACCTGCGACTCAATAATG--GCAAACCACAAGGACTGAGCCT 2263
Query 146831 TTACTTGTC-TTTCGTACAGTTTATTCTTTTCGTATTTCTCGTACAATATTTCAAAACTA 146889
| || || |||| || | | | |||||||| ||||| | || || |
Sbjct 2264 TGACCGTTCGGTTCGCAC-GACCCTCTTGCTCGTATTTAGTGTACAGCTTCTCGAATTCA 2322
Query 146890 GAACCGTACTCGTCGAGGAGGCCGGGATACTTTTTGGGACAGAACAGCGACCATTCTTTA 146949
|| | | ||| | ||||| || | || | || || | ||||||||| | | |
Sbjct 2323 TCGCCCCAGACATCGTGCAGGCCCGGGCATTTGTGCGGGCACATCAGCGACCAATTCTCA 2382
Query 146950 TTCTCCTTCACGCGTTCCATAAACAAATCGGGAATCCAAAGGCCCAGCATCAAGTCGCGA 147009
|| ||| ||||||| ||| || | |||||| ||||||||| | | || |||||
Sbjct 2383 TTGGCCTCGACGCGTTTCATGAAGAGATCGGGTATCCAAAGGGCGTAAAACAGATCGCGG 2442
Query 147010 GCCTTGGCG----TCCTCGGAGCCCATGTTGCGTCTCAAGTT-GAGGACATCGTAAATTT 147064
|| ||| ||||| ||| |||| ||| |||| || | || | | |
Sbjct 2443 GC----GCGATTCTCCTCCTTGCCAGTGTT-TTTCTTGAGTTCCAGAAACTCAAAGACAT 2497
Query 147065 CCGGATGCCAAGGCTCCACGTATGCGGCGAGTGCGCCTTTTCGCTTACCG---CCCTGAT 147121
||| ||||| ||||||| ||| ||| | || || ||||| ||| |||||||
Sbjct 2498 CCGAGTGCCAGGGCTCCAGGTAAATGGCAAAGGCACCGGGACGCTTGCCGCCACCCTGAT 2557
Query 147122 CGACGTGGCGCACCATGTTATTGAAGACTCGTAACATGGACACGAGGCC 147170
| || | ||| ||| || |||||||| | | ||||| || |||||
Sbjct 2558 CCACATAGCGTGCCACATTGTTGAAGACCCTCAGCATGGGAACTAGGCC 2606
>seq8501
Length=20033
Score = 143 bits (158), Expect = 3e-29
Identities = 723/1130 (64%), Gaps = 43/1130 (4%)
Strand=Plus/Minus
Query 146062 TGGTTGACCACCTGAAACTCGCCGGCGAGAACGCGCCTCAGATACACGTTGCTGGTGAAC 146121
|||||||||||||| || || || | ||||| || || ||| | ||| |||| |
Sbjct 2456 TGGTTGACCACCTGGAATTCACCAGACAGAACTCGTCTGGTATAAATGTTCGTGGTATAG 2397
Query 146122 GGCTCGAACGACTCGTTGTTACCGAGTATCTGCGCCGTCGTAGCGGTAGGCATGTACGCC 146181
|||||||| || |||||||| || | || || || || | || |||||||| ||
Sbjct 2396 GGCTCGAAAGATTCGTTGTTTCCCATAATTTGAGCAGTAGACGCAGTAGGCATAGGGGCA 2337
Query 146182 ACCAGCAAAGAGTTTCTCACGCCGTGTCTTTGAATCTTTTCCCGTAGTTTGGACCAATTC 146241
|| |||| ||||| | || ||||| ||| || ||| |||||| ||||| |
Sbjct 2336 ACAAGCAGGGAGTTCCGGACACCGTGCTTTTTGATGGACTCCTTTAGTTTTTGCCAATCC 2277
Query 146242 CACAAATGATCCGTGGGATAGATATTGTAGTTGTCGTAATGC-ATAGTGCCGCGGAACAG 146300
|||| | | ||| || | | | | ||||||| ||| | | | || | ||
Sbjct 2276 CACA---GGTTCGTTGGCTGTTTGTCCCACATGTCGTACTGCTAGAATTCCTTTGCTCAC 2220
Query 146301 GGGGC-TATTCTCGTACG-ATTCATAAGGACCGTCGATCTTGGCCAGTTCGCAGCTAGCT 146358
||||| || ||| || | | ||||| ||||| |||| || |||||||| ||||| |||
Sbjct 2219 GGGGCTTACCCTCATAGGTACTCATAGGGACCTTCGACCTGCGCCAGTTCACAGCTGGCT 2160
Query 146359 TCCAGAGCCGAAAAGTATATGGTCTCCGCGATCATGTAGTTGACGCTCCTGGCCTCCTCG 146418
||||| || |||| || || || ||| | || | | ||| || ||
Sbjct 2159 TCCAGGGCACCGTAGTAAATCGTTTCAAATATCTGCTGATTCAAAAGACCGGCTTCTTCA 2100
Query 146419 CTGTCGTAGGGGATATCG-AGAAGCACAAAGGCGTCGGCGAGACCCTGTATCCCGACACC 146477
|| || || |||| |||| | || | |||||||| |||| |||||| | |||| ||
Sbjct 2099 CTTTCATATGGGA-ATCGCATGAGAATCAAGGCGTCAGCGAAACCCTGAACACCGATGCC 2041
Query 146478 AACGGGGCGGTGTTTC---TTGTTACTGTTCGCAGCGCCCGCAGTGGGATAGTGGTTGCT 146534
||||| || ||| || ||| | || || | | | || |||||| |||| |
Sbjct 2040 CACGGGACGATGTCTCAAATTGGATTTCTTTGC--CTCTGGGAG-GGGATAAAAGTTGAT 1984
Query 146535 GTCGATGATCTTGTTGAGATTACGCACGACAATTTTCGTCAAACGATTCAG---CAGGAC 146591
|| || |||||||||||||| || | || || | || || | |||
Sbjct 1983 ATCAATTATCTTGTTGAGATTTTTGGTAACCGTCTTGGTAACTTCCTTAAGTTTCTGGA- 1925
Query 146592 ATAGTCAAATGTTTTAGTTTTAACGT-TGACGCACTTGTTGACGGCGATAGAGGCCAAGT 146650
| |||||| || || | || |||| || |||| | ||||| || |||| ||
Sbjct 1924 --AATCAAATTTT----TTCTCGGGTGTGACAAACATGTTAAGAGCGATGGATGCCAGGT 1871
Query 146651 TACATACGGCAGTCTCGTCCTTGTCGCAATACTGCACAATCTCGGCGCAGAGGTTGCTGC 146710
| || || ||| |||| ||| | |||| | || || || | ||| | ||||||||
Sbjct 1870 TGCACACTGCAATCTCATCCGGCGAGGAATATTCAACGATTTCTGTGCACAAGTTGCTGC 1811
Query 146711 ACTTGATGATGCCCAAAtttttttGGTTACTAAACTTGTTGCAGGGGTCCTTGTAGAGCA 146770
|||| ||| |||| | || | ||||| || | ||||||||| |||||| ||||||
Sbjct 1810 ACTTAATGGTGCCAACGTTCTGCTGGTTGCTTTTCCTGTTGCAGGCATCCTTGAAGAGCA 1751
Query 146771 TGTACGGTCCCCCGGTTTCGACATTGGTCTCGACGATGAATCTAAACA-AATCTCTG-GC 146828
| ||||| || ||||| || | | ||| | ||| | || || || ||| ||
Sbjct 1750 TATACGGGTTGCCAGTTTCCACCTGCGACTCAATAATG--GCAAACCACAAGGACTGAGC 1693
Query 146829 CTTTACTTGTC-TTTCGTACAGTTTATTCTTTTCGTATTTCTCGTACAATATTTCAAAAC 146887
||| || || |||| || | | | |||||||| ||||| | || ||
Sbjct 1692 CTTGACCGTTCGGTTCGCAC-GACCCTCTTGCTCGTATTTAGTGTACAGCTTCTCGAATT 1634
Query 146888 TAGAACCGTACTCGTCGAGGAGGCCGGGATACTTTTTGGGACAGAACAGCGACCATTCTT 146947
| || | | ||| | ||||| || | || | || || | ||||||||| | |
Sbjct 1633 CATCGCCCCAGACATCGTGCAGGCCCGGGCATTTGTGCGGGCACATCAGCGACCAATTCT 1574
Query 146948 TATTCTCCTTCACGCGTTCCATAAACAAATCGGGAATCCAAAGGCCCAGCATCAAGTCGC 147007
||| ||| ||||||| ||| || | |||||| ||||||||| | | || ||||
Sbjct 1573 CATTGGCCTCGACGCGTTTCATGAAGAGATCGGGTATCCAAAGGGCGTAAAACAGATCGC 1514
Query 147008 GAGCCTTGGCG----TCCTCGGAGCCCATGTTGCGTCTCAAGTTGAGGACATCGTAAATT 147063
| || ||| ||||| ||| |||| ||| | | || | || | |
Sbjct 1513 GGGC----GCGATTCTCCTCCTTGCCAGTGTT-TTTCTGAGTTCCAGAAACTCAAAGACA 1459
Query 147064 TCCGGATGCCAAGGCTCCACGTATGCGGCGAGTGCGCCTTTTCGCTTACCG---CCCTGA 147120
|||| ||||| ||||||| ||| ||| | || || ||||| ||| ||||||
Sbjct 1458 TCCGAGTGCCAGGGCTCCAGGTAAATGGCAAAGGCACCGGGACGCTTGCCGCCACCCTGA 1399
Query 147121 TCGACGTGGCGCACCATGTTATTGAAGACTCGTAACATGGACACGAGGCC 147170
|| || | ||| ||| || |||||||| | | ||||| || |||||
Sbjct 1398 TCCACATAGCGTGCCACATTGTTGAAGACCCTCAGCATGGGAACTAGGCC 1349
>seq22190
Length=927835
Score = 132 bits (146), Expect = 5e-26
Identities = 166/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
||||| || | || | |||||| || | |||||||| || || || ||||| ||| |
Sbjct 837296 CCACCACGCAGGCGGAGCACCAAGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAC 837237
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| ||||| ||| || ||||||||||| ||| |||||||||||||||| || || ||
Sbjct 837236 AAGGTGCGTCCATCTTCCAGCTGTTTTCCGGCGAAGATCAATCGCTGCTGGTCTGGGGGA 837177
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066
|| |||||||||||| ||| || ||| | | || | ||| || | | ||| ||
Sbjct 837176 ATTCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTATCGGAAGGCTCAACC 837117
Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114
|| | || | || |||||||||| ||| || |||||||| ||||||
Sbjct 837116 TCCAAAGTGATGGTCTTGCCGGTCAAAGTCTTCACAAAAATTTGCATG 837069
>seq22266
Length=384576
Score = 129 bits (142), Expect = 6e-25
Identities = 166/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
||||| || | || | ||||| ||| | || ||||| || || || ||||| || |
Sbjct 109157 CCACCACGCAGGCGGAGCACCAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAC 109216
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| ||||| ||| || ||||| || || ||| |||||| ||||||||||| || ||
Sbjct 109217 AGGGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGGGGA 109276
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066
||||||||||||||| ||| || ||| | | |||| |||||||| | ||| ||
Sbjct 109277 ATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATGGTGTCCGAAGGCTCCACC 109336
Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGG 127115
|| | ||| | || |||||||| || ||||| || ||||| |||||||
Sbjct 109337 TCCAAGGTGATGGTCTTGCCGGTGAGGGTTTTCACGAAAATTTGCATGG 109385
>seq22228
Length=358660
Score = 116 bits (128), Expect = 4e-21
Identities = 115/149 (77%), Gaps = 0/149 (0%)
Strand=Plus/Minus
Query 50654 GCTTCTATGTTGCCCAGATCGCCGACGTGGCGGTCGACGGCGTTGGGAGCGCCGTGGTTG 50713
|| || ||||||||||||||||| | ||||||||| || || ||| |||||||| |
Sbjct 288159 GCCTCAATGTTGCCCAGATCGCCCAGGTGGCGGTCCTCGTCGGCGGGGGCGCCGTGCTCC 288100
Query 50714 CGGCCCAACGGATTAAAGTGCTCGCCGGCCGACGTGCAGCCGTTGCTCGTGTCGCCGAAT 50773
||| | ||||| |||||| |||| ||| ||||||||||| | |||| |||||
Sbjct 288099 TTGCCGTAAGGATTGAAGTGCGGCCCGGATGACATGCAGCCGTTGGTGTTGTCACCGAAC 288040
Query 50774 TCGTGCACGTGGAACCCGTGAAAGCCCTT 50802
|||||||||||||| ||||| | |||||
Sbjct 288039 TCGTGCACGTGGAATCCGTGCAGACCCTT 288011
>seq5502
Length=68615
Score = 114 bits (126), Expect = 1e-20
Identities = 162/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
||||| || | ||||| ||||| || | || ||||| ||||| || |||||||| |
Sbjct 6732 CCACCACGAAGACGCAATACCAAGTGAAGGGTCGACTCCTTTTGGATGTTGTAATCAGAC 6791
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| ||| || || || || || || || || |||| |||||||||||||| || ||
Sbjct 6792 AACGTACGTCCGTCCTCCAGTTGCTTGCCGGCAAAGATTAATCGCTGCTGATCTGGGGGA 6851
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066
|| |||||||||||| ||| || ||| | | |||| ||||| | ||||||
Sbjct 6852 ATACCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCGGATGGCTCGACC 6911
Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114
|| | ||| | |||||||| ||||| || || || || || ||||||
Sbjct 6912 TCAAGGGTAATGGTTTTGCCAGTCAGGGTCTTCACGAAGATTTGCATG 6959
Score = 111 bits (122), Expect = 1e-19
Identities = 162/229 (71%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945
||| ||||| | || | |||||| || | || ||||| || || || || ||||||
Sbjct 5819 TCCTCCGCGGAGACGGAGCACCAAGTGCAAAGTGGACTCCTTCTGGATGTTATAATCGGA 5878
Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005
|| ||||| ||| || | ||| || || ||| ||||||| ||||||||||| || ||
Sbjct 5879 CAGAGTGCGTCCATCTTCCAACTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGGG 5938
Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065
|| |||||||||||| ||| || ||| | | || | ||| || | |||||
Sbjct 5939 AATTCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTATCAGAGGGTTCGAC 5998
Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114
||| | ||| | ||||| ||||||| || ||||| || || ||||||
Sbjct 5999 TTCCAAGGTGATGGTTTTTCCGGTCAAGGTCTTTACGAAGATTTGCATG 6047
Score = 100 bits (110), Expect = 3e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
|||||||| | ||| | ||||| || | || || || || || || ||||| |||
Sbjct 6504 CCACCGCGGAGTCGGAGAACCAAGTGAAGGGTGGATTCCTTCTGGATGTTGTAGTCGGAA 6563
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| ||||| ||| || | ||| ||||||||| | || | ||||||||||| || ||
Sbjct 6564 AGGGTGCGGCCATCTTCCAACTGCTTTCCAGCGAAAATGAGACGCTGCTGATCTGGGGGA 6623
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066
|| |||||||| ||| || || ||| | | ||| | |||||| | ||| |||
Sbjct 6624 ATTCCCTCCTTATCCTGAATCTTAGCCTTCACATTTTCAATGGTGTCAGATGGCTCCACT 6683
Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114
|||| || | ||||| ||||||| || ||||| || || ||||||
Sbjct 6684 TCGAGAGTGATGGTTTTTCCGGTCAAGGTCTTTACGAAGATTTGCATG 6731
Score = 96.9 bits (106), Expect = 3e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
|||||||| | ||| | ||||| || | || || || || || || ||||| ||
Sbjct 6276 CCACCGCGGAGTCGGAGAACCAAGTGAAGGGTGGATTCCTTCTGGATGTTGTAGTCCGAA 6335
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| ||||| ||| || | || ||||||||| | || | || |||||||| || ||
Sbjct 6336 AGGGTGCGGCCATCTTCCAATTGCTTTCCAGCGAAAATGAGACGTTGCTGATCTGGTGGG 6395
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066
||||||||||||||| ||| || ||| | | ||| | |||||| | ||| ||
Sbjct 6396 ATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTTTCAATGGTGTCGGAGGGCTCAACC 6455
Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114
|| | || | || ||||| ||||| || ||||| || |||||||||
Sbjct 6456 TCCAGCGTAATGGTCTTGCCAGTCAGGGTCTTTACGAAGATCTGCATG 6503
Score = 91.5 bits (100), Expect = 1e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
|||||||| | || | ||||| || | || || || || || || ||||| |||
Sbjct 6048 CCACCGCGAAGACGGAGAACCAAGTGAAGGGTGGATTCCTTCTGGATGTTGTAGTCGGAA 6107
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| || || ||| || ||||| || || || |||||| ||||||||||| || ||
Sbjct 6108 AGGGTTCGTCCATCTTCAAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGATCTGGGGGA 6167
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066
|| |||||||||||| ||| || ||| | | |||| ||||| | ||| ||
Sbjct 6168 ATACCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCGGATGGCTCCACC 6227
Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114
|| | ||| | |||||||| ||||| || || || || || ||||||
Sbjct 6228 TCAAGGGTAATGGTTTTGCCAGTCAGGGTCTTCACGAAGATTTGCATG 6275
Score = 87.8 bits (96), Expect = 2e-12
Identities = 156/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
|||||||| | || | ||||| || | || || || || || || ||||| ||
Sbjct 6960 CCACCGCGAAGACGGAGAACCAAGTGAAGGGTGGATTCCTTCTGGATGTTGTAGTCCGAA 7019
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| ||||| ||| || | ||| ||||||||| | || | ||||||||||| || ||
Sbjct 7020 AGGGTGCGGCCATCTTCCAACTGCTTTCCAGCGAAAATGAGACGCTGCTGATCTGGGGGA 7079
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066
|| |||||||| ||| || || ||| | | ||| | |||||| | ||||||
Sbjct 7080 ATTCCCTCCTTATCCTGAATCTTAGCCTTCACATTTTCAATGGTGTCAGATGGTTCGACT 7139
Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114
|| | ||| | || || ||||||| || ||||| || || ||||||
Sbjct 7140 TCCAAGGTGATGGTCTTTCCGGTCAAGGTCTTTACGAAGATTTGCATG 7187
>seq20501
Length=31302
Score = 98.7 bits (108), Expect = 9e-16
Identities = 162/231 (70%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 126884 GCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCG 126943
|| ||||| || | |||| |||||| || | || ||||| || ||||| || || ||
Sbjct 11114 GCACCACCACGCAGACGCAGCACCAAGTGCAAAGTGGACTCCTTCTGAATGTTATAGTCA 11173
Query 126944 CCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGA 127003
| || || ||| || ||||| || |||||| |||||| ||||||||||| |||
Sbjct 11174 GAGAGGGTACGGCCATCTTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCTGGA 11233
Query 127004 GGTATGCCCTCCTTGTCCGTGATTTTCTGC-TTGAGTTGTTCGACGGTGTCCGTACTCTC 127062
|| || || || |||||| ||| | | || |||| | ||||| ||||||| ||
Sbjct 11234 GGAATTCCTTCTTTGTCC-TGAATCTTGGCTTTGACATTTTCGATAGTGTCCGACGGTTC 11292
Query 127063 GACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
||| || | || | || ||||| || || || || || || ||||||||
Sbjct 11293 GACCTCAAGAGTGATGGTCTTGCCCGTGAGGGTCTTAACGAAGATCTGCAT 11343
>seq22136
Length=515022
Score = 91.5 bits (100), Expect = 1e-13
Identities = 165/239 (69%), Gaps = 2/239 (1%)
Strand=Plus/Minus
Query 47355 GAAGCCGTCGCCATTGAGATGGAGTTTTTCGCCGAGGCTCTGCCCG-AATCTTTAGTGGG 47413
|| || || ||||||||| |||||| || |||| || ||||||| || | ||| |||
Sbjct 289860 GATGCGGTGGCCATTGAGCAGGAGTTCCTCACCGATGCCCTGCCCGTAAACCTTATTGGC 289801
Query 47414 AATGAACGCGGAGATGATGAGAAAGTACATCGAATTTGTCGCCGACCGCCTGCTCGTTCA 47473
| ||||| || | ||| ||||||| || || || || ||||| |||| || |
Sbjct 289800 A-TGAACTGCGACCTCATGTCGCAGTACATTGAGTTCGTGGCGGACCGTTTGCTGGTGGA 289742
Query 47474 GCTAAAGTATCCCAAGATTTACCACACCGAGAATCCATTCGAGTTTATGAACAACATTTC 47533
| | ||||| ||| ||||| |||| || ||| | || ||| | | || ||
Sbjct 289741 ATTGGGCGTTGGAAAGATCTACAACACCAAGAACCCGTTCAACTTCATGGAGATGATCTC 289682
Query 47534 GCTCGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGGCGAATATAAACGTTTCGGCG 47592
|| || |||||||||||||| ||||||||| || ||||| || | ||| | ||||
Sbjct 289681 CCTGGACGGCAAGACCAACTTCTTCGAGAAGAAGGTGGGCGAGTACCAGCGTATGGGCG 289623
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 475365169340560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |