Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20rhopaloa_20[refseq_20GCF_5F000236305.1_202013-02-22] 22,819 sequences; 197,375,704 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq1813 159 3e-34 seq8502 149 6e-31 seq8501 143 3e-29 seq22190 132 5e-26 seq22266 129 6e-25 seq22228 116 4e-21 seq5502 114 1e-20 seq20501 98.7 9e-16 seq22136 91.5 1e-13 >seq1813 Length=4749 Score = 159 bits (176), Expect = 3e-34 Identities = 724/1128 (64%), Gaps = 41/1128 (4%) Strand=Plus/Plus Query 146062 TGGTTGACCACCTGAAACTCGCCGGCGAGAACGCGCCTCAGATACACGTTGCTGGTGAAC 146121 |||||||||||||| || || || | ||||| || || ||| | ||| |||| | Sbjct 1500 TGGTTGACCACCTGGAATTCACCAGACAGAACTCGTCTGGTATAAATGTTCGTGGTATAG 1559 Query 146122 GGCTCGAACGACTCGTTGTTACCGAGTATCTGCGCCGTCGTAGCGGTAGGCATGTACGCC 146181 |||||||| || |||||||| || | || || || || | || |||||||| || Sbjct 1560 GGCTCGAAAGATTCGTTGTTTCCCATAATTTGAGCAGTAGACGCAGTAGGCATAGGGGCA 1619 Query 146182 ACCAGCAAAGAGTTTCTCACGCCGTGTCTTTGAATCTTTTCCCGTAGTTTGGACCAATTC 146241 || |||| ||||| | || ||||| ||| || ||| |||||| ||||| | Sbjct 1620 ACAAGCAGGGAGTTCCGGACACCGTGCTTTTTGATGGACTCCTTTAGTTTTTGCCAATCC 1679 Query 146242 CACAAATGATCCGTGGGATAGATATTGTAGTTGTCGTAATGCATAGTGCCGCGGAACAGG 146301 |||| | | ||| || | | | | ||||||| |||| | | || | || | Sbjct 1680 CACA---GGTTCGTTGGCTGTTTGTCCCACATGTCGTACTGCAGAATTCCTTTGCTCACG 1736 Query 146302 GGGCTATTCTCGTACGATTCATAAGGACCGTCGATCTTGGCCAGTTCGCAGCTAGCTTCC 146361 ||||| ||| || | ||||| ||||| |||| || |||||||| ||||| |||||| Sbjct 1737 GGGCTTCCCTCATAGGTCTCATAGGGACCTTCGACCTGCGCCAGTTCACAGCTGGCTTCC 1796 Query 146362 AGAGCCGAAAAGTATATGGTCTCCGCGATCATGTAGTTGACGCTCCTGGCCTCCTCGCTG 146421 || || |||| || || || ||| | || | | |||||| || || Sbjct 1797 AGGGCACCGTAGTAAATCGTTTCAAATATCTGCTGATTCAAAAGACCGGCCTCTTCACTT 1856 Query 146422 TCGTAGGGGATATCG-AGAAGCACAAAGGCGTCGGCGAGACCCTGTATCCCGACACCAAC 146480 || || |||| |||| | || | |||||||| |||| |||||| | |||| || || Sbjct 1857 TCATATGGGA-ATCGCATGAGAATCAAGGCGTCAGCGAAACCCTGAACACCGATGCCCAC 1915 Query 146481 GGGGCGGTGTTTC---TTGTTACTGTTCGCAGCGCCCGCAGTGGGATAGTGGTTGCTGTC 146537 ||| || ||| || ||| | || || | | | || |||||| |||| | || Sbjct 1916 GGGACGATGTCTCAAATTGGATTTCTTTGC--CTCTGGGAG-GGGATAAAAGTTGATATC 1972 Query 146538 GATGATCTTGTTGAGATTACGCACGACAATTTTCGTCAAACGATTCAG---CAGGACATA 146594 || |||||||||||||| || | || || | || || | ||| | Sbjct 1973 AATTATCTTGTTGAGATTTTTGGTAACCGTCTTGGTAACTTCCTTAAGTTTCTGGA---A 2029 Query 146595 GTCAAATGTTTTAGTTTTAACGT-TGACGCACTTGTTGACGGCGATAGAGGCCAAGTTAC 146653 |||||| || || | || |||| || |||| | ||||| || |||| ||| | Sbjct 2030 ATCAAATTTT----TTCTCGGGTGTGACAAACATGTTAAGAGCGATGGATGCCAGGTTGC 2085 Query 146654 ATACGGCAGTCTCGTCCTTGTCGCAATACTGCACAATCTCGGCGCAGAGGTTGCTGCACT 146713 | || ||| |||| ||| | |||| | || || || | ||| | ||||||||||| Sbjct 2086 ACACTGCAATCTCATCCGGCGAGGAATATTCAACGATTTCTGTGCACAAGTTGCTGCACT 2145 Query 146714 TGATGATGCCCAAAtttttttGGTTACTAAACTTGTTGCAGGGGTCCTTGTAGAGCATGT 146773 | ||| |||| | || | ||||| || | ||||||||| |||||| ||||||| | Sbjct 2146 TAATGGTGCCAACGTTCTGCTGGTTGCTTTTCCTGTTGCAGGCATCCTTGAAGAGCATAT 2205 Query 146774 ACGGTCCCCCGGTTTCGACATTGGTCTCGACGATGAATCTAAACA-AATCTCTG-GCCTT 146831 |||| || ||||| || | | ||| | ||| | || || || ||| ||||| Sbjct 2206 ACGGGTTGCCAGTTTCCACCTGCGACTCAATAATG--GCAAACCACAAGGACTGAGCCTT 2263 Query 146832 TACTTGTC-TTTCGTACAGTTTATTCTTTTCGTATTTCTCGTACAATATTTCAAAACTAG 146890 || || |||| || | | | |||||||| ||||| | || || | Sbjct 2264 GACCGTTCGGTTCGCAC-GACCCTCTTGCTCGTATTTAGTGTACAGCTTCTCGAATTCAT 2322 Query 146891 AACCGTACTCGTCGAGGAGGCCGGGATACTTTTTGGGACAGAACAGCGACCATTCTTTAT 146950 || | | ||| | ||||| || | || | || || | ||||||||| | | || Sbjct 2323 CGCCCCAGACATCGTGCAGGCCCGGGCATTTGTGCGGGCACATCAGCGACCAATTCTCAT 2382 Query 146951 TCTCCTTCACGCGTTCCATAAACAAATCGGGAATCCAAAGGCCCAGCATCAAGTCGCGAG 147010 | ||| ||||||| ||| || | |||||| ||||||||| | | || ||||| | Sbjct 2383 TGGCCTCGACGCGTTTCATGAAGAGATCGGGTATCCAAAGGGCGTAAAACAGATCGCGGG 2442 Query 147011 CCTTGGCG----TCCTCGGAGCCCATGTTGCGTCTCAAGTT-GAGGACATCGTAAATTTC 147065 | ||| ||||| ||| |||| ||| |||| || | || | | || Sbjct 2443 C----GCGATTCTCCTCCTTGCCAGTGTT-TTTCTTGAGTTCCAGAAACTCAAAGACATC 2497 Query 147066 CGGATGCCAAGGCTCCACGTATGCGGCGAGTGCGCCTTTTCGCTTACCG---CCCTGATC 147122 || ||||| ||||||| ||| ||| | || || ||||| ||| |||||||| Sbjct 2498 CGAGTGCCAGGGCTCCAGGTAAATGGCAAAGGCACCGGGACGCTTGCCGCCACCCTGATC 2557 Query 147123 GACGTGGCGCACCATGTTATTGAAGACTCGTAACATGGACACGAGGCC 147170 || | ||| ||| || |||||||| | | ||||| || ||||| Sbjct 2558 CACATAGCGTGCCACATTGTTGAAGACCCTCAGCATGGGAACTAGGCC 2605 >seq8502 Length=4749 Score = 149 bits (164), Expect = 6e-31 Identities = 723/1129 (64%), Gaps = 42/1129 (4%) Strand=Plus/Plus Query 146062 TGGTTGACCACCTGAAACTCGCCGGCGAGAACGCGCCTCAGATACACGTTGCTGGTGAAC 146121 |||||||||||||| || || || | ||||| || || ||| | ||| |||| | Sbjct 1500 TGGTTGACCACCTGGAATTCACCAGACAGAACTCGTCTGGTATAAATGTTCGTGGTATAG 1559 Query 146122 GGCTCGAACGACTCGTTGTTACCGAGTATCTGCGCCGTCGTAGCGGTAGGCATGTACGCC 146181 |||||||| || |||||||| || | || || || || | || |||||||| || Sbjct 1560 GGCTCGAAAGATTCGTTGTTTCCCATAATTTGAGCAGTAGACGCAGTAGGCATAGGGGCA 1619 Query 146182 ACCAGCAAAGAGTTTCTCACGCCGTGTCTTTGAATCTTTTCCCGTAGTTTGGACCAATTC 146241 || |||| ||||| | || ||||| ||| || ||| |||||| ||||| | Sbjct 1620 ACAAGCAGGGAGTTCCGGACACCGTGCTTTTTGATGGACTCCTTTAGTTTTTGCCAATCC 1679 Query 146242 CACAAATGATCCGTGGGATAGATATTGTAGTTGTCGTAATGCATAGTGCCGCGGAACAGG 146301 |||| | | ||| || | | | | ||||||| |||| | | || | || | Sbjct 1680 CACA---GGTTCGTTGGCTGTTTGTCCCACATGTCGTACTGCAGAATTCCTTTGCTCACG 1736 Query 146302 GGGCTATTCTCGTACGATTCATAAGGACCGTCGATCTTGGCCAGTTCGCAGCTAGCTTCC 146361 ||||| ||| || | ||||| ||||| |||| || |||||||| ||||| |||||| Sbjct 1737 GGGCTTCCCTCATAGGTCTCATAGGGACCTTCGACCTGCGCCAGTTCACAGCTGGCTTCC 1796 Query 146362 AGAGCCGAAAAGTATATGGTCTCCGCGATCATGT-AGTTGACGCTCCTGGCCTCCTCGCT 146420 || || |||| || || || ||| | | | | | ||| || || || Sbjct 1797 AGGGCACCGTAGTAAATCGTTTCAAATATCTGCTGATTCAAAAAGACCGGCTTCTTCACT 1856 Query 146421 GTCGTAGGGGATATCG-AGAAGCACAAAGGCGTCGGCGAGACCCTGTATCCCGACACCAA 146479 || || |||| |||| | || | |||||||| |||| |||||| | |||| || | Sbjct 1857 TTCATATGGGA-ATCGCATGAGAATCAAGGCGTCAGCGAAACCCTGAACACCGATGCCCA 1915 Query 146480 CGGGGCGGTGTTTC---TTGTTACTGTTCGCAGCGCCCGCAGTGGGATAGTGGTTGCTGT 146536 |||| || ||| || ||| | || || | | | || |||||| |||| | | Sbjct 1916 CGGGACGATGTCTCAAATTGGATTTCTTTGC--CTCTGGGAG-GGGATAAAAGTTGATAT 1972 Query 146537 CGATGATCTTGTTGAGATTACGCACGACAATTTTCGTCAAACGATTCAG---CAGGACAT 146593 | || |||||||||||||| || | || || | || || | ||| Sbjct 1973 CAATTATCTTGTTGAGATTTTTGGTAACCGTCTTGGTAACTTCCTTAAGTTTCTGGA--- 2029 Query 146594 AGTCAAATGTTTTAGTTTTAACGT-TGACGCACTTGTTGACGGCGATAGAGGCCAAGTTA 146652 | |||||| || || | || |||| || |||| | ||||| || |||| ||| Sbjct 2030 AATCAAATTTT----TTCTCGGGTGTGACAAACATGTTAAGAGCGATGGATGCCAGGTTG 2085 Query 146653 CATACGGCAGTCTCGTCCTTGTCGCAATACTGCACAATCTCGGCGCAGAGGTTGCTGCAC 146712 || || ||| |||| ||| | |||| | || || || | ||| | |||||||||| Sbjct 2086 CACACTGCAATCTCATCCGGCGAGGAATATTCAACGATTTCTGTGCACAAGTTGCTGCAC 2145 Query 146713 TTGATGATGCCCAAAtttttttGGTTACTAAACTTGTTGCAGGGGTCCTTGTAGAGCATG 146772 || ||| |||| | || | ||||| || | ||||||||| |||||| ||||||| Sbjct 2146 TTAATGGTGCCAACGTTCTGCTGGTTGCTTTTCCTGTTGCAGGCATCCTTGAAGAGCATA 2205 Query 146773 TACGGTCCCCCGGTTTCGACATTGGTCTCGACGATGAATCTAAACA-AATCTCTG-GCCT 146830 ||||| || ||||| || | | ||| | ||| | || || || ||| |||| Sbjct 2206 TACGGGTTGCCAGTTTCCACCTGCGACTCAATAATG--GCAAACCACAAGGACTGAGCCT 2263 Query 146831 TTACTTGTC-TTTCGTACAGTTTATTCTTTTCGTATTTCTCGTACAATATTTCAAAACTA 146889 | || || |||| || | | | |||||||| ||||| | || || | Sbjct 2264 TGACCGTTCGGTTCGCAC-GACCCTCTTGCTCGTATTTAGTGTACAGCTTCTCGAATTCA 2322 Query 146890 GAACCGTACTCGTCGAGGAGGCCGGGATACTTTTTGGGACAGAACAGCGACCATTCTTTA 146949 || | | ||| | ||||| || | || | || || | ||||||||| | | | Sbjct 2323 TCGCCCCAGACATCGTGCAGGCCCGGGCATTTGTGCGGGCACATCAGCGACCAATTCTCA 2382 Query 146950 TTCTCCTTCACGCGTTCCATAAACAAATCGGGAATCCAAAGGCCCAGCATCAAGTCGCGA 147009 || ||| ||||||| ||| || | |||||| ||||||||| | | || ||||| Sbjct 2383 TTGGCCTCGACGCGTTTCATGAAGAGATCGGGTATCCAAAGGGCGTAAAACAGATCGCGG 2442 Query 147010 GCCTTGGCG----TCCTCGGAGCCCATGTTGCGTCTCAAGTT-GAGGACATCGTAAATTT 147064 || ||| ||||| ||| |||| ||| |||| || | || | | | Sbjct 2443 GC----GCGATTCTCCTCCTTGCCAGTGTT-TTTCTTGAGTTCCAGAAACTCAAAGACAT 2497 Query 147065 CCGGATGCCAAGGCTCCACGTATGCGGCGAGTGCGCCTTTTCGCTTACCG---CCCTGAT 147121 ||| ||||| ||||||| ||| ||| | || || ||||| ||| ||||||| Sbjct 2498 CCGAGTGCCAGGGCTCCAGGTAAATGGCAAAGGCACCGGGACGCTTGCCGCCACCCTGAT 2557 Query 147122 CGACGTGGCGCACCATGTTATTGAAGACTCGTAACATGGACACGAGGCC 147170 | || | ||| ||| || |||||||| | | ||||| || ||||| Sbjct 2558 CCACATAGCGTGCCACATTGTTGAAGACCCTCAGCATGGGAACTAGGCC 2606 >seq8501 Length=20033 Score = 143 bits (158), Expect = 3e-29 Identities = 723/1130 (64%), Gaps = 43/1130 (4%) Strand=Plus/Minus Query 146062 TGGTTGACCACCTGAAACTCGCCGGCGAGAACGCGCCTCAGATACACGTTGCTGGTGAAC 146121 |||||||||||||| || || || | ||||| || || ||| | ||| |||| | Sbjct 2456 TGGTTGACCACCTGGAATTCACCAGACAGAACTCGTCTGGTATAAATGTTCGTGGTATAG 2397 Query 146122 GGCTCGAACGACTCGTTGTTACCGAGTATCTGCGCCGTCGTAGCGGTAGGCATGTACGCC 146181 |||||||| || |||||||| || | || || || || | || |||||||| || Sbjct 2396 GGCTCGAAAGATTCGTTGTTTCCCATAATTTGAGCAGTAGACGCAGTAGGCATAGGGGCA 2337 Query 146182 ACCAGCAAAGAGTTTCTCACGCCGTGTCTTTGAATCTTTTCCCGTAGTTTGGACCAATTC 146241 || |||| ||||| | || ||||| ||| || ||| |||||| ||||| | Sbjct 2336 ACAAGCAGGGAGTTCCGGACACCGTGCTTTTTGATGGACTCCTTTAGTTTTTGCCAATCC 2277 Query 146242 CACAAATGATCCGTGGGATAGATATTGTAGTTGTCGTAATGC-ATAGTGCCGCGGAACAG 146300 |||| | | ||| || | | | | ||||||| ||| | | | || | || Sbjct 2276 CACA---GGTTCGTTGGCTGTTTGTCCCACATGTCGTACTGCTAGAATTCCTTTGCTCAC 2220 Query 146301 GGGGC-TATTCTCGTACG-ATTCATAAGGACCGTCGATCTTGGCCAGTTCGCAGCTAGCT 146358 ||||| || ||| || | | ||||| ||||| |||| || |||||||| ||||| ||| Sbjct 2219 GGGGCTTACCCTCATAGGTACTCATAGGGACCTTCGACCTGCGCCAGTTCACAGCTGGCT 2160 Query 146359 TCCAGAGCCGAAAAGTATATGGTCTCCGCGATCATGTAGTTGACGCTCCTGGCCTCCTCG 146418 ||||| || |||| || || || ||| | || | | ||| || || Sbjct 2159 TCCAGGGCACCGTAGTAAATCGTTTCAAATATCTGCTGATTCAAAAGACCGGCTTCTTCA 2100 Query 146419 CTGTCGTAGGGGATATCG-AGAAGCACAAAGGCGTCGGCGAGACCCTGTATCCCGACACC 146477 || || || |||| |||| | || | |||||||| |||| |||||| | |||| || Sbjct 2099 CTTTCATATGGGA-ATCGCATGAGAATCAAGGCGTCAGCGAAACCCTGAACACCGATGCC 2041 Query 146478 AACGGGGCGGTGTTTC---TTGTTACTGTTCGCAGCGCCCGCAGTGGGATAGTGGTTGCT 146534 ||||| || ||| || ||| | || || | | | || |||||| |||| | Sbjct 2040 CACGGGACGATGTCTCAAATTGGATTTCTTTGC--CTCTGGGAG-GGGATAAAAGTTGAT 1984 Query 146535 GTCGATGATCTTGTTGAGATTACGCACGACAATTTTCGTCAAACGATTCAG---CAGGAC 146591 || || |||||||||||||| || | || || | || || | ||| Sbjct 1983 ATCAATTATCTTGTTGAGATTTTTGGTAACCGTCTTGGTAACTTCCTTAAGTTTCTGGA- 1925 Query 146592 ATAGTCAAATGTTTTAGTTTTAACGT-TGACGCACTTGTTGACGGCGATAGAGGCCAAGT 146650 | |||||| || || | || |||| || |||| | ||||| || |||| || Sbjct 1924 --AATCAAATTTT----TTCTCGGGTGTGACAAACATGTTAAGAGCGATGGATGCCAGGT 1871 Query 146651 TACATACGGCAGTCTCGTCCTTGTCGCAATACTGCACAATCTCGGCGCAGAGGTTGCTGC 146710 | || || ||| |||| ||| | |||| | || || || | ||| | |||||||| Sbjct 1870 TGCACACTGCAATCTCATCCGGCGAGGAATATTCAACGATTTCTGTGCACAAGTTGCTGC 1811 Query 146711 ACTTGATGATGCCCAAAtttttttGGTTACTAAACTTGTTGCAGGGGTCCTTGTAGAGCA 146770 |||| ||| |||| | || | ||||| || | ||||||||| |||||| |||||| Sbjct 1810 ACTTAATGGTGCCAACGTTCTGCTGGTTGCTTTTCCTGTTGCAGGCATCCTTGAAGAGCA 1751 Query 146771 TGTACGGTCCCCCGGTTTCGACATTGGTCTCGACGATGAATCTAAACA-AATCTCTG-GC 146828 | ||||| || ||||| || | | ||| | ||| | || || || ||| || Sbjct 1750 TATACGGGTTGCCAGTTTCCACCTGCGACTCAATAATG--GCAAACCACAAGGACTGAGC 1693 Query 146829 CTTTACTTGTC-TTTCGTACAGTTTATTCTTTTCGTATTTCTCGTACAATATTTCAAAAC 146887 ||| || || |||| || | | | |||||||| ||||| | || || Sbjct 1692 CTTGACCGTTCGGTTCGCAC-GACCCTCTTGCTCGTATTTAGTGTACAGCTTCTCGAATT 1634 Query 146888 TAGAACCGTACTCGTCGAGGAGGCCGGGATACTTTTTGGGACAGAACAGCGACCATTCTT 146947 | || | | ||| | ||||| || | || | || || | ||||||||| | | Sbjct 1633 CATCGCCCCAGACATCGTGCAGGCCCGGGCATTTGTGCGGGCACATCAGCGACCAATTCT 1574 Query 146948 TATTCTCCTTCACGCGTTCCATAAACAAATCGGGAATCCAAAGGCCCAGCATCAAGTCGC 147007 ||| ||| ||||||| ||| || | |||||| ||||||||| | | || |||| Sbjct 1573 CATTGGCCTCGACGCGTTTCATGAAGAGATCGGGTATCCAAAGGGCGTAAAACAGATCGC 1514 Query 147008 GAGCCTTGGCG----TCCTCGGAGCCCATGTTGCGTCTCAAGTTGAGGACATCGTAAATT 147063 | || ||| ||||| ||| |||| ||| | | || | || | | Sbjct 1513 GGGC----GCGATTCTCCTCCTTGCCAGTGTT-TTTCTGAGTTCCAGAAACTCAAAGACA 1459 Query 147064 TCCGGATGCCAAGGCTCCACGTATGCGGCGAGTGCGCCTTTTCGCTTACCG---CCCTGA 147120 |||| ||||| ||||||| ||| ||| | || || ||||| ||| |||||| Sbjct 1458 TCCGAGTGCCAGGGCTCCAGGTAAATGGCAAAGGCACCGGGACGCTTGCCGCCACCCTGA 1399 Query 147121 TCGACGTGGCGCACCATGTTATTGAAGACTCGTAACATGGACACGAGGCC 147170 || || | ||| ||| || |||||||| | | ||||| || ||||| Sbjct 1398 TCCACATAGCGTGCCACATTGTTGAAGACCCTCAGCATGGGAACTAGGCC 1349 >seq22190 Length=927835 Score = 132 bits (146), Expect = 5e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | |||||| || | |||||||| || || || ||||| ||| | Sbjct 837296 CCACCACGCAGGCGGAGCACCAAGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAC 837237 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||||| ||| || ||||||||||| ||| |||||||||||||||| || || || Sbjct 837236 AAGGTGCGTCCATCTTCCAGCTGTTTTCCGGCGAAGATCAATCGCTGCTGGTCTGGGGGA 837177 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || |||||||||||| ||| || ||| | | || | ||| || | | ||| || Sbjct 837176 ATTCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTATCGGAAGGCTCAACC 837117 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 || | || | || |||||||||| ||| || |||||||| |||||| Sbjct 837116 TCCAAAGTGATGGTCTTGCCGGTCAAAGTCTTCACAAAAATTTGCATG 837069 >seq22266 Length=384576 Score = 129 bits (142), Expect = 6e-25 Identities = 166/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | ||||| ||| | || ||||| || || || ||||| || | Sbjct 109157 CCACCACGCAGGCGGAGCACCAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAC 109216 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||||| ||| || ||||| || || ||| |||||| ||||||||||| || || Sbjct 109217 AGGGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGGGGA 109276 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 ||||||||||||||| ||| || ||| | | |||| |||||||| | ||| || Sbjct 109277 ATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATGGTGTCCGAAGGCTCCACC 109336 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGG 127115 || | ||| | || |||||||| || ||||| || ||||| ||||||| Sbjct 109337 TCCAAGGTGATGGTCTTGCCGGTGAGGGTTTTCACGAAAATTTGCATGG 109385 >seq22228 Length=358660 Score = 116 bits (128), Expect = 4e-21 Identities = 115/149 (77%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 50654 GCTTCTATGTTGCCCAGATCGCCGACGTGGCGGTCGACGGCGTTGGGAGCGCCGTGGTTG 50713 || || ||||||||||||||||| | ||||||||| || || ||| |||||||| | Sbjct 288159 GCCTCAATGTTGCCCAGATCGCCCAGGTGGCGGTCCTCGTCGGCGGGGGCGCCGTGCTCC 288100 Query 50714 CGGCCCAACGGATTAAAGTGCTCGCCGGCCGACGTGCAGCCGTTGCTCGTGTCGCCGAAT 50773 ||| | ||||| |||||| |||| ||| ||||||||||| | |||| ||||| Sbjct 288099 TTGCCGTAAGGATTGAAGTGCGGCCCGGATGACATGCAGCCGTTGGTGTTGTCACCGAAC 288040 Query 50774 TCGTGCACGTGGAACCCGTGAAAGCCCTT 50802 |||||||||||||| ||||| | ||||| Sbjct 288039 TCGTGCACGTGGAATCCGTGCAGACCCTT 288011 >seq5502 Length=68615 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | ||||| ||||| || | || ||||| ||||| || |||||||| | Sbjct 6732 CCACCACGAAGACGCAATACCAAGTGAAGGGTCGACTCCTTTTGGATGTTGTAATCAGAC 6791 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||| || || || || || || || || |||| |||||||||||||| || || Sbjct 6792 AACGTACGTCCGTCCTCCAGTTGCTTGCCGGCAAAGATTAATCGCTGCTGATCTGGGGGA 6851 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || |||||||||||| ||| || ||| | | |||| ||||| | |||||| Sbjct 6852 ATACCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCGGATGGCTCGACC 6911 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 || | ||| | |||||||| ||||| || || || || || |||||| Sbjct 6912 TCAAGGGTAATGGTTTTGCCAGTCAGGGTCTTCACGAAGATTTGCATG 6959 Score = 111 bits (122), Expect = 1e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945 ||| ||||| | || | |||||| || | || ||||| || || || || |||||| Sbjct 5819 TCCTCCGCGGAGACGGAGCACCAAGTGCAAAGTGGACTCCTTCTGGATGTTATAATCGGA 5878 Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005 || ||||| ||| || | ||| || || ||| ||||||| ||||||||||| || || Sbjct 5879 CAGAGTGCGTCCATCTTCCAACTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGGG 5938 Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || |||||||||||| ||| || ||| | | || | ||| || | ||||| Sbjct 5939 AATTCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTATCAGAGGGTTCGAC 5998 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 ||| | ||| | ||||| ||||||| || ||||| || || |||||| Sbjct 5999 TTCCAAGGTGATGGTTTTTCCGGTCAAGGTCTTTACGAAGATTTGCATG 6047 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 |||||||| | ||| | ||||| || | || || || || || || ||||| ||| Sbjct 6504 CCACCGCGGAGTCGGAGAACCAAGTGAAGGGTGGATTCCTTCTGGATGTTGTAGTCGGAA 6563 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||||| ||| || | ||| ||||||||| | || | ||||||||||| || || Sbjct 6564 AGGGTGCGGCCATCTTCCAACTGCTTTCCAGCGAAAATGAGACGCTGCTGATCTGGGGGA 6623 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || |||||||| ||| || || ||| | | ||| | |||||| | ||| ||| Sbjct 6624 ATTCCCTCCTTATCCTGAATCTTAGCCTTCACATTTTCAATGGTGTCAGATGGCTCCACT 6683 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 |||| || | ||||| ||||||| || ||||| || || |||||| Sbjct 6684 TCGAGAGTGATGGTTTTTCCGGTCAAGGTCTTTACGAAGATTTGCATG 6731 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 |||||||| | ||| | ||||| || | || || || || || || ||||| || Sbjct 6276 CCACCGCGGAGTCGGAGAACCAAGTGAAGGGTGGATTCCTTCTGGATGTTGTAGTCCGAA 6335 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||||| ||| || | || ||||||||| | || | || |||||||| || || Sbjct 6336 AGGGTGCGGCCATCTTCCAATTGCTTTCCAGCGAAAATGAGACGTTGCTGATCTGGTGGG 6395 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 ||||||||||||||| ||| || ||| | | ||| | |||||| | ||| || Sbjct 6396 ATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTTTCAATGGTGTCGGAGGGCTCAACC 6455 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 || | || | || ||||| ||||| || ||||| || ||||||||| Sbjct 6456 TCCAGCGTAATGGTCTTGCCAGTCAGGGTCTTTACGAAGATCTGCATG 6503 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 |||||||| | || | ||||| || | || || || || || || ||||| ||| Sbjct 6048 CCACCGCGAAGACGGAGAACCAAGTGAAGGGTGGATTCCTTCTGGATGTTGTAGTCGGAA 6107 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || || ||| || ||||| || || || |||||| ||||||||||| || || Sbjct 6108 AGGGTTCGTCCATCTTCAAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGATCTGGGGGA 6167 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || |||||||||||| ||| || ||| | | |||| ||||| | ||| || Sbjct 6168 ATACCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCGGATGGCTCCACC 6227 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 || | ||| | |||||||| ||||| || || || || || |||||| Sbjct 6228 TCAAGGGTAATGGTTTTGCCAGTCAGGGTCTTCACGAAGATTTGCATG 6275 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 |||||||| | || | ||||| || | || || || || || || ||||| || Sbjct 6960 CCACCGCGAAGACGGAGAACCAAGTGAAGGGTGGATTCCTTCTGGATGTTGTAGTCCGAA 7019 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||||| ||| || | ||| ||||||||| | || | ||||||||||| || || Sbjct 7020 AGGGTGCGGCCATCTTCCAACTGCTTTCCAGCGAAAATGAGACGCTGCTGATCTGGGGGA 7079 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || |||||||| ||| || || ||| | | ||| | |||||| | |||||| Sbjct 7080 ATTCCCTCCTTATCCTGAATCTTAGCCTTCACATTTTCAATGGTGTCAGATGGTTCGACT 7139 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 || | ||| | || || ||||||| || ||||| || || |||||| Sbjct 7140 TCCAAGGTGATGGTCTTTCCGGTCAAGGTCTTTACGAAGATTTGCATG 7187 >seq20501 Length=31302 Score = 98.7 bits (108), Expect = 9e-16 Identities = 162/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 126884 GCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCG 126943 || ||||| || | |||| |||||| || | || ||||| || ||||| || || || Sbjct 11114 GCACCACCACGCAGACGCAGCACCAAGTGCAAAGTGGACTCCTTCTGAATGTTATAGTCA 11173 Query 126944 CCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGA 127003 | || || ||| || ||||| || |||||| |||||| ||||||||||| ||| Sbjct 11174 GAGAGGGTACGGCCATCTTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCTGGA 11233 Query 127004 GGTATGCCCTCCTTGTCCGTGATTTTCTGC-TTGAGTTGTTCGACGGTGTCCGTACTCTC 127062 || || || || |||||| ||| | | || |||| | ||||| ||||||| || Sbjct 11234 GGAATTCCTTCTTTGTCC-TGAATCTTGGCTTTGACATTTTCGATAGTGTCCGACGGTTC 11292 Query 127063 GACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||| || | || | || ||||| || || || || || || |||||||| Sbjct 11293 GACCTCAAGAGTGATGGTCTTGCCCGTGAGGGTCTTAACGAAGATCTGCAT 11343 >seq22136 Length=515022 Score = 91.5 bits (100), Expect = 1e-13 Identities = 165/239 (69%), Gaps = 2/239 (1%) Strand=Plus/Minus Query 47355 GAAGCCGTCGCCATTGAGATGGAGTTTTTCGCCGAGGCTCTGCCCG-AATCTTTAGTGGG 47413 || || || ||||||||| |||||| || |||| || ||||||| || | ||| ||| Sbjct 289860 GATGCGGTGGCCATTGAGCAGGAGTTCCTCACCGATGCCCTGCCCGTAAACCTTATTGGC 289801 Query 47414 AATGAACGCGGAGATGATGAGAAAGTACATCGAATTTGTCGCCGACCGCCTGCTCGTTCA 47473 | ||||| || | ||| ||||||| || || || || ||||| |||| || | Sbjct 289800 A-TGAACTGCGACCTCATGTCGCAGTACATTGAGTTCGTGGCGGACCGTTTGCTGGTGGA 289742 Query 47474 GCTAAAGTATCCCAAGATTTACCACACCGAGAATCCATTCGAGTTTATGAACAACATTTC 47533 | | ||||| ||| ||||| |||| || ||| | || ||| | | || || Sbjct 289741 ATTGGGCGTTGGAAAGATCTACAACACCAAGAACCCGTTCAACTTCATGGAGATGATCTC 289682 Query 47534 GCTCGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGGCGAATATAAACGTTTCGGCG 47592 || || |||||||||||||| ||||||||| || ||||| || | ||| | |||| Sbjct 289681 CCTGGACGGCAAGACCAACTTCTTCGAGAAGAAGGTGGGCGAGTACCAGCGTATGGGCG 289623 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475365169340560