Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20rhopaloa_20[refseq_20GCF_5F000236305.1_202013-02-22] 22,819 sequences; 197,375,704 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq8502 194 2e-44 seq1813 190 2e-43 seq8501 176 4e-39 seq22190 100 3e-16 seq5502 100 3e-16 >seq8502 Length=4749 Score = 194 bits (214), Expect = 2e-44 Identities = 1166/1856 (63%), Gaps = 47/1856 (3%) Strand=Plus/Minus Query 122841 TACAAATATTTTGGATACAAAACGTTAGAAAACGGATATTTGaaaaaaaTCGAGGAAAAG 122900 ||||| |||||||||| |||||| | ||| ||| || || | | | |||| Sbjct 2990 TACAACTATTTTGGATTCAAAACCCTCGAACGTTCTTATCTGCTGAAGAGAAATGGAAAG 2931 Query 122901 GTCGCCGAACGTATTCAACATATGCTCATGCGCGTCGCTATAGGCGTGCACGGACGCGAC 122960 ||||||| ||| ||||| ||| | |||||||| || ||||| | || ||| || Sbjct 2930 ATCGCCGAGCGTCCGCAACACATGTTGATGCGCGTGGCAATAGGAATCCATGGAGAGGAT 2871 Query 122961 ATCGAAAACGCGACCG---AAACTTACGATTTGATGTCTCAAAAATTTTTCACGCACGCG 123017 || || ||| ||| |||| ||| | | ||||| | ||| ||||| ||||| Sbjct 2870 ATTGAT---GCGGCCGTGGAAACCTACAACCTTTTGTCTGAGCGATTCTTCACCCACGCA 2814 Query 123018 AGTCCCACTTTGTTCGCCGCCGGCACGAAGTTGCCTCAGTTGTCTTCGTGTTTTTTGCTC 123077 || || | || ||||| | ||| || || ||| ||||||| ||||| | | Sbjct 2813 TCGCCAACGCTTTTTGCCGCTGCCACAAATCGCCCGCAGCTGTCTTCCTGTTTCCTTTTG 2754 Query 123078 ACCTTGCGCGAAGACAGCATCACCGGTATCTATGAAACTTTGCGCGATTGCGCGTTGATT 123137 ||| || | ||| ||| || |||| | || | || | ||||| |||| Sbjct 2753 ACCATGACGGCTGACTCGATCGAGGGCATCTTTAAATCGGTGGAACACTGCGCCATGATC 2694 Query 123138 TCCAAATTTGGCGGCGGCATAGGCGTGAACGTGCACGACGTAAGAGGCCGCGGAAGCCGC 123197 || |||| | || ||||| || |||| || || | | | | || | | Sbjct 2693 TCGAAATCGGCAGGTGGCATTGGACTGAATGTTCATTGCATCCGGGCAAAAGGCACCTCT 2634 Query 123198 ATCAGAAGCACCGACGGAATCGCCTCCGGGCTCGAATCCATGCTGCGAGTTTACAATAAC 123257 || | |||| | || | || || || | |||||||| | || | ||| || Sbjct 2633 ATTTGCGGCACGAATGGCACTTCCAATGGCCTAGTTCCCATGCTGAGGGTCTTCAACAAT 2574 Query 123258 GCCGTGCGGCACGTCGACCAGGG---CGGCAAACGCAAAGGCGCGATGGCGATCTATCTA 123314 | | || | || || ||||| |||||| || || || | || || || || Sbjct 2573 GTGGCACGCTATGTGGATCAGGGTGGCGGCAAGCGTCCCGGTGCCTTTGCCATTTACCTG 2514 Query 123315 GAACCGTGGCACGTTGATGTGTACGATTTTTTAAATTTAAAACGCAACATGGGGGCGGAA 123374 || || |||||| ||||| | || ||| | | | || |||| || ||| Sbjct 2513 GAGCCCTGGCACTCGGATGTCTTTGAGTTTCTGGAACTCAAGAAAAACACTGGCAAGGAG 2454 Query 123375 GAAAAGAAAGCCCGCGATTTGTTGTACGCTTTATGGGTACCCGATTTGTTTATGCGACGC 123434 || || ||||||||| |||| ||||| | ||| |||||||| | || ||| |||| Sbjct 2453 GAGAATCGCGCCCGCGATCTGTTTTACGCCCTTTGGATACCCGATCTCTTCATGAAACGC 2394 Query 123435 GTAAAAGACGACGGCGTGTGGTCGCTCATGTGTCCCGATCGGTGTCCCGGCTTGAGCGAC 123494 || | | | | | |||||||| ||||| || | || || ||| || ||| Sbjct 2393 GTCGAGGCCAATGAGAATTGGTCGCTGATGTGCCCGCACAAATGCCCGGGCCTGCACGAT 2334 Query 123495 GTTTACGGCAATCAGTTTGACGAGTTGTACGCGCAATACGAGCGCGAAGG-----CAAAC 123549 || | ||| || | || || || ||||| | ||||||||| || || | ||| Sbjct 2333 GTCTGGGGCGATGAATTCGAGAAGCTGTACACTAAATACGAGCAAGAGGGTCGTGCGAAC 2274 Query 123550 AGGTTAGTCA-GGTTCCGGCAC-GTGATTTGTTCAAATTTATTATCGAAACACAAGTCGA 123607 | |||| || || | | ||| |||| ||||| || | || || || Sbjct 2273 CGAACGGTCAAGGCTCAGTCCTTGTGGTTTGCC-------ATTATTGAGTCGCAGGTGGA 2221 Query 123608 AACCGGAACGCCGTACATGCTCTACAAAGACGCCTGCAACAGGAAAACCAATCAGAGCAA 123667 ||| || | ||||| ||||||| ||| || |||||||||||||||| ||| ||| || Sbjct 2220 AACTGGCAACCCGTATATGCTCTTCAAGGATGCCTGCAACAGGAAAAGCAACCAGCAGAA 2161 Query 123668 CTTGGGAACAATAAAATGTAGTAATCTTTGCTCCGAAATTATCGAATACAGCGATGCCGA 123727 | | || || || || || || || | ||| | ||||| | ||||| | | || Sbjct 2160 CGTTGGCACCATTAAGTGCAGCAACTTGTGCACAGAAATCGTTGAATATTCCTCGCCGGA 2101 Query 123728 TCAAGTGGCCGTGTGTAATTTGGCTTCGATTTGCGTGAATCGTTGCGTCGAAAACGGCGC 123787 | | | || ||||| || |||| || || | || | ||| | | | | | Sbjct 2100 TGAGATTGCAGTGTGCAACCTGGCATCCATCGCTCTTAACATGTTTGTC-ACACCCGAGA 2042 Query 123788 T----TTTAATTTCCAAACGCTCAAACGCATAACAAAAACTGTAGTAAAGAATTTGAACA 123843 ||| ||||||| | || || | || || || || || ||| | |||| Sbjct 2041 AAAAATTTGATTTCCAGAAACTTAAGGAAGTTACCAAGACGGTTACCAAAAATCTCAACA 1982 Query 123844 AAATTATCGATGTTAATTTTTATCCTTTGGAGGAAGCGCGTTTGTCTAATTTGAAACACA 123903 | || || ||| | || |||||||| | || || || ||||||| ||| Sbjct 1981 AGATAATTGATATCAACTTTTATCCCCTCCCAGAGGCAAAGAAATCCAATTTGAGACATC 1922 Query 123904 GACCGGTCGGAGTGGGCATTCAAGGGTTGGCCGACGCGTTTGTAATGCTGCGCATGCCGT 123963 | || || || | || |||| || || || ||||| || | | |||| | || | Sbjct 1921 GTCCCGTGGGCATCGGTGTTCAGGGTTTCGCTGACGCCTTGATTCTCATGCGATTCCCAT 1862 Query 123964 ACGAAAGCGACGAAGCAAAGTTGCTT-AATACGCAAATAGCCGAAACAATTTATTACGGC 124022 | ||||| || ||||| | || ||| ||| ||| ||||| ||||| ||||| Sbjct 1861 ATGAAAGTGAAGAAGCCGGTCTTTTTGAATCAGCAGATATTTGAAACGATTTACTACGGT 1802 Query 124023 GCTTTGGAGGCGAGCTGCGAACTTGCGAAAATTCACGGCGCGTACGAAAGTTACGCGGGC 124082 || |||| || ||||| ||||| ||| | | | || | || || | || | ||| Sbjct 1801 GCCCTGGAAGCCAGCTGTGAACTGGCGCAGGTCGAAGGTCCCTATGAGACCTATGAGGGA 1742 Query 124083 AGCCCGGCGAGCCGAGGTATTTTGCAGTACGACATGTGGAATGCTACA-CCGACAAATTT 124141 ||||| | |||| ||| ||| ||||||||||||||||| | ||| || || || | Sbjct 1741 AGCCCCGTGAGCAAAGGAATTCTGCAGTACGACATGTGGGACAA-ACAGCCAACGAACCT 1683 Query 124142 GTGGGACTGGAGCGTTTTAAAACAACGCATATCGACGCACGGTTTGCGTAACTCGCTGTT 124201 |||||| ||| |||| | ||| | ||||||| | || ||||| ||| | Sbjct 1682 GTGGGATTGGCAAAAACTAAAGGAGTCCATCAAAAAGCACGGTGTCCGGAACTCCCTGCT 1623 Query 124202 GGTGGCGTACATGCCGACGGCAACCACTGCTCAAATTTTAGGAAACAACGAATCCTTCGA 124261 || || ||||| || || | |||||||||||| | |||||||||||||| ||||| Sbjct 1622 TGTTGCCCCTATGCCTACTGCGTCTACTGCTCAAATTATGGGAAACAACGAATCTTTCGA 1563 Query 124262 GCCGT---TCACTAACAATTTGTACGTGCGACGAGTGTTAGCCGGCGATTTTCAAGTGAT 124318 ||| | ||| ||| |||| ||| ||||||| | | || || || || ||| | Sbjct 1562 GCCCTATACCACGAAC-ATTTATAC--CAGACGAGTTCTGTCTGGTGAATTCCAGGTGGT 1506 Query 124319 AAATCATCATTTGGTGGACGACTTGGTGGCGTTAAATTTGTACGATGAAAACATGCGCAA 124378 || ||||||||| || ||||| | | | | |||| ||||| ||||| || Sbjct 1505 CAACCATCATTTGTTGAGGGACTTAACTGAGCTCGACTTGTGGGATGACGACATGAAGAA 1446 Query 124379 CGAAATTATTGCGGCCGGTGGCAGCGTGCAGCGCATCGCTTCGATTCCGGAACACGTCAA 124438 | | || ||| | | | ||| | | || | || | | ||||| | | || Sbjct 1445 CCAGATCATTTCCAGCAGGGGCTCCATCCAAGGTATTGAGACCATTCCCCAGAAAGTTCG 1386 Query 124439 GCAACTGTACAAAACCGTGTGGGAAAT----GAAAAATAAACGATTAATTGAAATGGCCG 124494 | || |||||||| ||||||||||| | || | || |||| ||||||||| Sbjct 1385 CGATCTTTACAAAACTGTGTGGGAAATCTCAGTGAAGTCCAC----AATTAAAATGGCCG 1330 Query 124495 TCGACCGAGGCGCGTACACGGATCAAAGTCAATCTTTTAACGTGTTTGTAGCGGAACCCA 124554 || || || |||| | || |||||||| || || || | ||| || || || | Sbjct 1329 CTGATCGTGGGGCGTTTATAGACCAAAGTCAGTCGTTCAATATTCATGTGGCTGAGCCAA 1270 Query 124555 CCTACGCCCGCATGACCAGCATACACATGCACGCGTGGAGCAGC-GGACTCAAAACGGGC 124613 ||| | |||| ||| ||| | || | |||| ||| ||||| || || || Sbjct 1269 ACTATGGAAAATTGACGTCCATTCACTTTTACTCTTGGA-AAGCTGGACTTAAGACCGGA 1211 Query 124614 ATGTATTACTTAAGAACCAAACCGGCGGCCGATGCCATTCAATTTACCGTCGACAA 124669 ||||| ||| | | || || || || ||| |||| ||||| || ||||| || || Sbjct 1210 ATGTACTACCTGCGCACAAAGCCAGCCGCCAATGCAATTCAGTTCACCGTAGATAA 1155 >seq1813 Length=4749 Score = 190 bits (210), Expect = 2e-43 Identities = 1164/1855 (63%), Gaps = 46/1855 (2%) Strand=Plus/Minus Query 122841 TACAAATATTTTGGATACAAAACGTTAGAAAACGGATATTTGaaaaaaaTCGAGGAAAAG 122900 ||||| |||||||||| |||||| | ||| ||| || || | | | |||| Sbjct 2989 TACAACTATTTTGGATTCAAAACCCTCGAACGTTCTTATCTGCTGAAGAGAAATGGAAAG 2930 Query 122901 GTCGCCGAACGTATTCAACATATGCTCATGCGCGTCGCTATAGGCGTGCACGGACGCGAC 122960 ||||||| ||| ||||| ||| | |||||||| || ||||| | || ||| || Sbjct 2929 ATCGCCGAGCGTCCGCAACACATGTTGATGCGCGTGGCAATAGGAATCCATGGAGAGGAT 2870 Query 122961 ATCGAAAACGCGACCG---AAACTTACGATTTGATGTCTCAAAAATTTTTCACGCACGCG 123017 || || ||| ||| |||| ||| | | ||||| | ||| ||||| ||||| Sbjct 2869 ATTGAT---GCGGCCGTGGAAACCTACAACCTTTTGTCTGAGCGATTCTTCACCCACGCA 2813 Query 123018 AGTCCCACTTTGTTCGCCGCCGGCACGAAGTTGCCTCAGTTGTCTTCGTGTTTTTTGCTC 123077 || || | || ||||| | ||| || || ||| ||||||| ||||| | | Sbjct 2812 TCGCCAACGCTTTTTGCCGCTGCCACAAATCGCCCGCAGCTGTCTTCCTGTTTCCTTTTG 2753 Query 123078 ACCTTGCGCGAAGACAGCATCACCGGTATCTATGAAACTTTGCGCGATTGCGCGTTGATT 123137 ||| || | ||| ||| || |||| | || | || | ||||| |||| Sbjct 2752 ACCATGACGGCTGACTCGATCGAGGGCATCTTTAAATCGGTGGAACACTGCGCCATGATC 2693 Query 123138 TCCAAATTTGGCGGCGGCATAGGCGTGAACGTGCACGACGTAAGAGGCCGCGGAAGCCGC 123197 || |||| | || ||||| || |||| || || | | | | || | | Sbjct 2692 TCGAAATCGGCAGGTGGCATTGGACTGAATGTTCATTGCATCCGGGCAAAAGGCACCTCT 2633 Query 123198 ATCAGAAGCACCGACGGAATCGCCTCCGGGCTCGAATCCATGCTGCGAGTTTACAATAAC 123257 || | |||| | || | || || || | |||||||| | || | ||| || Sbjct 2632 ATTTGCGGCACGAATGGCACTTCCAATGGCCTAGTTCCCATGCTGAGGGTCTTCAACAAT 2573 Query 123258 GCCGTGCGGCACGTCGACCAGGG---CGGCAAACGCAAAGGCGCGATGGCGATCTATCTA 123314 | | || | || || ||||| |||||| || || || | || || || || Sbjct 2572 GTGGCACGCTATGTGGATCAGGGTGGCGGCAAGCGTCCCGGTGCCTTTGCCATTTACCTG 2513 Query 123315 GAACCGTGGCACGTTGATGTGTACGATTTTTTAAATTTAAAACGCAACATGGGGGCGGAA 123374 || || |||||| ||||| | || ||| | | | || |||| || ||| Sbjct 2512 GAGCCCTGGCACTCGGATGTCTTTGAGTTTCTGGAACTCAAGAAAAACACTGGCAAGGAG 2453 Query 123375 GAAAAGAAAGCCCGCGATTTGTTGTACGCTTTATGGGTACCCGATTTGTTTATGCGACGC 123434 || || ||||||||| |||| ||||| | ||| |||||||| | || ||| |||| Sbjct 2452 GAGAATCGCGCCCGCGATCTGTTTTACGCCCTTTGGATACCCGATCTCTTCATGAAACGC 2393 Query 123435 GTAAAAGACGACGGCGTGTGGTCGCTCATGTGTCCCGATCGGTGTCCCGGCTTGAGCGAC 123494 || | | | | | |||||||| ||||| || | || || ||| || ||| Sbjct 2392 GTCGAGGCCAATGAGAATTGGTCGCTGATGTGCCCGCACAAATGCCCGGGCCTGCACGAT 2333 Query 123495 GTTTACGGCAATCAGTTTGACGAGTTGTACGCGCAATACGAGCGCGAAGG-----CAAAC 123549 || | ||| || | || || || ||||| | ||||||||| || || | ||| Sbjct 2332 GTCTGGGGCGATGAATTCGAGAAGCTGTACACTAAATACGAGCAAGAGGGTCGTGCGAAC 2273 Query 123550 AGGTTAGTCA-GGTTCCGGCAC-GTGATTTGTTCAAATTTATTATCGAAACACAAGTCGA 123607 | |||| || || | | ||| |||| ||||| || | || || || Sbjct 2272 CGAACGGTCAAGGCTCAGTCCTTGTGGTTTGCC-------ATTATTGAGTCGCAGGTGGA 2220 Query 123608 AACCGGAACGCCGTACATGCTCTACAAAGACGCCTGCAACAGGAAAACCAATCAGAGCAA 123667 ||| || | ||||| ||||||| ||| || |||||||||||||||| ||| ||| || Sbjct 2219 AACTGGCAACCCGTATATGCTCTTCAAGGATGCCTGCAACAGGAAAAGCAACCAGCAGAA 2160 Query 123668 CTTGGGAACAATAAAATGTAGTAATCTTTGCTCCGAAATTATCGAATACAGCGATGCCGA 123727 | | || || || || || || || | ||| | ||||| | ||||| | | || Sbjct 2159 CGTTGGCACCATTAAGTGCAGCAACTTGTGCACAGAAATCGTTGAATATTCCTCGCCGGA 2100 Query 123728 TCAAGTGGCCGTGTGTAATTTGGCTTCGATTTGCGTGAATCGTTGCGTCGAAAACGGCGC 123787 | | | || ||||| || |||| || || | || | ||| | | | | | Sbjct 2099 TGAGATTGCAGTGTGCAACCTGGCATCCATCGCTCTTAACATGTTTGTC-ACACCCGAGA 2041 Query 123788 T----TTTAATTTCCAAACGCTCAAACGCATAACAAAAACTGTAGTAAAGAATTTGAACA 123843 ||| ||||||| | || || | || || || || || ||| | |||| Sbjct 2040 AAAAATTTGATTTCCAGAAACTTAAGGAAGTTACCAAGACGGTTACCAAAAATCTCAACA 1981 Query 123844 AAATTATCGATGTTAATTTTTATCCTTTGGAGGAAGCGCGTTTGTCTAATTTGAAACACA 123903 | || || ||| | || |||||||| | || || || ||||||| ||| Sbjct 1980 AGATAATTGATATCAACTTTTATCCCCTCCCAGAGGCAAAGAAATCCAATTTGAGACATC 1921 Query 123904 GACCGGTCGGAGTGGGCATTCAAGGGTTGGCCGACGCGTTTGTAATGCTGCGCATGCCGT 123963 | || || || | || |||| || || || ||||| || | | |||| | || | Sbjct 1920 GTCCCGTGGGCATCGGTGTTCAGGGTTTCGCTGACGCCTTGATTCTCATGCGATTCCCAT 1861 Query 123964 ACGAAAGCGACGAAGCAAAGTTGCTTAATACGCAAATAGCCGAAACAATTTATTACGGCG 124023 | ||||| || || || | | ||| ||| ||| ||||| ||||| ||||| | Sbjct 1860 ATGAAAGTGAAGAGGCCGGTCTTTTGAATCAGCAGATATTTGAAACGATTTACTACGGTG 1801 Query 124024 CTTTGGAGGCGAGCTGCGAACTTGCGAAAATTCACGGCGCGTACGAAAGTTACGCGGGCA 124083 | |||| || ||||| ||||| ||| | | | || | || || | || | ||| | Sbjct 1800 CCCTGGAAGCCAGCTGTGAACTGGCGCAGGTCGAAGGTCCCTATGAGACCTATGAGGGAA 1741 Query 124084 GCCCGGCGAGCCGAGGTATTTTGCAGTACGACATGTGGAATGCTACA-CCGACAAATTTG 124142 |||| | |||| ||| ||| ||||||||||||||||| | ||| || || || || Sbjct 1740 GCCCCGTGAGCAAAGGAATTCTGCAGTACGACATGTGGGACAA-ACAGCCAACGAACCTG 1682 Query 124143 TGGGACTGGAGCGTTTTAAAACAACGCATATCGACGCACGGTTTGCGTAACTCGCTGTTG 124202 ||||| ||| |||| | ||| | ||||||| | || ||||| ||| | Sbjct 1681 TGGGATTGGCAAAAACTAAAGGAGTCCATCAAAAAGCACGGTGTCCGGAACTCCCTGCTT 1622 Query 124203 GTGGCGTACATGCCGACGGCAACCACTGCTCAAATTTTAGGAAACAACGAATCCTTCGAG 124262 || || ||||| || || | |||||||||||| | |||||||||||||| |||||| Sbjct 1621 GTTGCCCCTATGCCTACTGCGTCTACTGCTCAAATTATGGGAAACAACGAATCTTTCGAG 1562 Query 124263 CCGT---TCACTAACAATTTGTACGTGCGACGAGTGTTAGCCGGCGATTTTCAAGTGATA 124319 || | ||| ||| |||| ||| ||||||| | | || || || || ||| | Sbjct 1561 CCCTATACCACGAAC-ATTTATAC--CAGACGAGTTCTGTCTGGTGAATTCCAGGTGGTC 1505 Query 124320 AATCATCATTTGGTGGACGACTTGGTGGCGTTAAATTTGTACGATGAAAACATGCGCAAC 124379 || ||||||||| || ||||| | | | | |||| ||||| ||||| ||| Sbjct 1504 AACCATCATTTGTTGAGGGACTTAACTGAGCTCGACTTGTGGGATGACGACATGAAGAAC 1445 Query 124380 GAAATTATTGCGGCCGGTGGCAGCGTGCAGCGCATCGCTTCGATTCCGGAACACGTCAAG 124439 | || ||| | | | ||| | | || | || | | ||||| | | || Sbjct 1444 CAGATCATTTCCAGCAGGGGCTCCATCCAAGGTATTGAGACCATTCCCCAGAAAGTTCGC 1385 Query 124440 CAACTGTACAAAACCGTGTGGGAAAT----GAAAAATAAACGATTAATTGAAATGGCCGT 124495 | || |||||||| ||||||||||| | || | || |||| ||||||||| Sbjct 1384 GATCTTTACAAAACTGTGTGGGAAATCTCAGTGAAGTCCAC----AATTAAAATGGCCGC 1329 Query 124496 CGACCGAGGCGCGTACACGGATCAAAGTCAATCTTTTAACGTGTTTGTAGCGGAACCCAC 124555 || || || |||| | || |||||||| || || || | ||| || || || | Sbjct 1328 TGATCGTGGGGCGTTTATAGACCAAAGTCAGTCGTTCAATATTCATGTGGCTGAGCCAAA 1269 Query 124556 CTACGCCCGCATGACCAGCATACACATGCACGCGTGGAGCAGC-GGACTCAAAACGGGCA 124614 ||| | |||| ||| ||| | || | |||| ||| ||||| || || || | Sbjct 1268 CTATGGAAAATTGACGTCCATTCACTTTTACTCTTGGA-AAGCTGGACTTAAGACCGGAA 1210 Query 124615 TGTATTACTTAAGAACCAAACCGGCGGCCGATGCCATTCAATTTACCGTCGACAA 124669 |||| ||| | | || || || || ||| |||| ||||| || ||||| || || Sbjct 1209 TGTACTACCTGCGCACAAAGCCAGCCGCCAATGCAATTCAGTTCACCGTAGATAA 1155 >seq8501 Length=20033 Score = 176 bits (194), Expect = 4e-39 Identities = 1167/1859 (63%), Gaps = 52/1859 (3%) Strand=Plus/Plus Query 122841 TACAAATATTTTGGATACAAAACGTTAGAAAACGGATATTTGaaaaaaaTCGAGGAAAAG 122900 ||||| |||||||||| |||||| | ||| ||| || || | | | |||| Sbjct 965 TACAACTATTTTGGATTCAAAACCCTCGAACGTTCTTATCTGCTGAAGAGAAATGGAAAG 1024 Query 122901 GTCGCCGAACGTATTCAACATATGCTCATGCGCGTCGCTATAGGCGTGCACGGACGCGAC 122960 ||||||| ||| ||||| ||| | |||||||| || ||||| | || ||| || Sbjct 1025 ATCGCCGAGCGTCCGCAACACATGTTGATGCGCGTGGCAATAGGAATCCATGGAGAGGAT 1084 Query 122961 ATCGAAAACGCGACCG---AAACTTACGATTTGATGTCTCAAAAATTTTTCACGCACGCG 123017 || || ||| ||| |||| ||| | | ||||| | ||| ||||| ||||| Sbjct 1085 ATTGAT---GCGGCCGTGGAAACCTACAACCTTTTGTCTGAGCGATTCTTCACCCACGCA 1141 Query 123018 AGTCCCACTTTGTTCGCCGCCGGCACGAAGTTGCCTCAGTTGTCTTCGTGTTTTTTGCTC 123077 || || | || ||||| | ||| || || ||| ||||||| ||||| | | Sbjct 1142 TCGCCAACGCTTTTTGCCGCTGCCACAAATCGCCCGCAGCTGTCTTCCTGTTTCCTTTTG 1201 Query 123078 ACCTTGCGCGAAGACAGCATCACCGGTATCTATGAAACTTTGCGCGATTGCGCGTTGATT 123137 ||| || | ||| ||| || |||| | || | || | ||||| |||| Sbjct 1202 ACCATGACGGCTGACTCGATCGAGGGCATCTTTAAATCGGTGGAACACTGCGCCATGATC 1261 Query 123138 TCCAAATTTGGCGGCGGCATAGGCGTGAACGTGCACGACGTAAGAGGCCGCGGAAGCCGC 123197 || |||| | || ||||| || |||| || || | | | | || | | Sbjct 1262 TCGAAATCGGCAGGTGGCATTGGACTGAATGTTCATTGCATCCGGGCAAAAGGCACCTCT 1321 Query 123198 ATCAGAAGCACCGACGGAATCGCCTCCGGGCTCGAATCCATGCTGCGAGTTTACAATAAC 123257 || | |||| | || | || || || | |||||||| | || | ||| || Sbjct 1322 ATTTGCGGCACGAATGGCACTTCCAATGGCCTAGTTCCCATGCTGAGGGTCTTCAACAAT 1381 Query 123258 GCCGTGCGGCACGTCGACCAGGG---CGGCAAACGCAAAGGCGCGATGGCGATCTATCTA 123314 | | || | || || ||||| |||||| || || || | || || || || Sbjct 1382 GTGGCACGCTATGTGGATCAGGGTGGCGGCAAGCGTCCCGGTGCCTTTGCCATTTACCTG 1441 Query 123315 GAACCGTGGCACGTTGATGTGTACGATTTTTTA-AATTTAAAACGCAACATGGGGGCGGA 123373 || || |||||| ||||| | || ||| | || | | || |||| || ||| Sbjct 1442 GAGCCCTGGCACTCGGATGTCTTTGAGTTTCTGGAACTCAGAAA--AACACTGGCAAGGA 1499 Query 123374 AGAAAAGAAAGCCCGCGATTTGTTGTACGCTTTATGGGTACCCGATTTGTTTATGCGACG 123433 || || ||||||||| |||| ||||| | ||| |||||||| | || ||| ||| Sbjct 1500 GGAGAATCGCGCCCGCGATCTGTTTTACGCCCTTTGGATACCCGATCTCTTCATGAAACG 1559 Query 123434 CGTAAAAGACGACGGCGTGTGGTCGCTCATGTGTCCCGATCGGTGTCCCGGCTTGAGCGA 123493 ||| | | | | | |||||||| ||||| || | || || ||| || ||| Sbjct 1560 CGTCGAGGCCAATGAGAATTGGTCGCTGATGTGCCCGCACAAATGCCCGGGCCTGCACGA 1619 Query 123494 CGTTTACGGCAATCAGTTTGACGAGTTGTACGCGCAATACGAGCGCGAAGG-----CAAA 123548 || | ||| || | || || || ||||| | ||||||||| || || | || Sbjct 1620 TGTCTGGGGCGATGAATTCGAGAAGCTGTACACTAAATACGAGCAAGAGGGTCGTGCGAA 1679 Query 123549 CAGGTTAGTCA-GGTTCCGGCAC-GTGATTTGTTCAAATTTATTATCGAAACACAAGTCG 123606 | | |||| || || | | ||| |||| ||||| || | || || | Sbjct 1680 CCGAACGGTCAAGGCTCAGTCCTTGTGGTTTGCC-------ATTATTGAGTCGCAGGTGG 1732 Query 123607 AAACCGGAACGCCGTACATGCTCTACAAAGACGCCTGCAACAGGAAAACCAATCAGAGCA 123666 |||| || | ||||| ||||||| ||| || |||||||||||||||| ||| ||| | Sbjct 1733 AAACTGGCAACCCGTATATGCTCTTCAAGGATGCCTGCAACAGGAAAAGCAACCAGCAGA 1792 Query 123667 ACTTGGGAACAATAAAATGTAGTAATCTTTGCTCCGAAATTATCGAATACAGCGATGCCG 123726 || | || || || || || || || | ||| | ||||| | ||||| | | | Sbjct 1793 ACGTTGGCACCATTAAGTGCAGCAACTTGTGCACAGAAATCGTTGAATATTCCTCGCCGG 1852 Query 123727 ATCAAGTGGCCGTGTGTAATTTGGCTTCGATTTGCGTGAATCGTTGCGTCGAAAACGGCG 123786 || | | || ||||| || |||| || || | || | ||| | | | | | Sbjct 1853 ATGAGATTGCAGTGTGCAACCTGGCATCCATCGCTCTTAACATGTTTGTC-ACACCCGAG 1911 Query 123787 CT----TTTAATTTCCAAACGCTCAAACGCATAACAAAAACTGTAGTAAAGAATTTGAAC 123842 ||| ||||||| | || || | || || || || || ||| | ||| Sbjct 1912 AAAAAATTTGATTTCCAGAAACTTAAGGAAGTTACCAAGACGGTTACCAAAAATCTCAAC 1971 Query 123843 AAAATTATCGATGTTAATTTTTATCCTTTGGAGGAAGCGCGTTTGTCTAATTTGAAACAC 123902 || || || ||| | || |||||||| | || || || ||||||| ||| Sbjct 1972 AAGATAATTGATATCAACTTTTATCCCCTCCCAGAGGCAAAGAAATCCAATTTGAGACAT 2031 Query 123903 AGACCGGTCGGAGTGGGCATTCAAGGGTTGGCCGACGCGTTTGTAATGCTGCGCATGCCG 123962 | || || || | || |||| || || || ||||| || | | |||| | || Sbjct 2032 CGTCCCGTGGGCATCGGTGTTCAGGGTTTCGCTGACGCCTTGATTCTCATGCGATTCCCA 2091 Query 123963 TACGAAAGCGACGAAGCAAAGTTGCTTAATACGCAAATAGCCGAAACAATTTATTACGGC 124022 || ||||| || ||||| | | ||| ||| ||| ||||| ||||| ||||| Sbjct 2092 TATGAAAGTGAAGAAGCCGGTCTTTTGAATCAGCAGATATTTGAAACGATTTACTACGGT 2151 Query 124023 GCTTTGGAGGCGAGCTGCGAACTTGCGAAAATTCACGGCGCGTACGAA-AGTTACGCGGG 124081 || |||| || ||||| ||||| ||| | | | || | || || | || | ||| Sbjct 2152 GCCCTGGAAGCCAGCTGTGAACTGGCGCAGGTCGAAGGTCCCTATGAGTACCTATGAGGG 2211 Query 124082 CA-GCCCGGCGAGCCGAGGTATTTT-GCAGTACGACATGTGGAATGCTACA-CCGACAAA 124138 | |||| | |||| ||| ||| | |||||||||||||||| | ||| || || || Sbjct 2212 TAAGCCCCGTGAGCAAAGGAATTCTAGCAGTACGACATGTGGGACAA-ACAGCCAACGAA 2270 Query 124139 TTTGTGGGACTGGAGCGTTTTAAAACAACGCATATCGACGCACGGTTTGCGTAACTCGCT 124198 ||||||| ||| |||| | ||| | ||||||| | || ||||| || Sbjct 2271 CCTGTGGGATTGGCAAAAACTAAAGGAGTCCATCAAAAAGCACGGTGTCCGGAACTCCCT 2330 Query 124199 GTTGGTGGCGTACATGCCGACGGCAACCACTGCTCAAATTTTAGGAAACAACGAATCCTT 124258 | | || || ||||| || || | |||||||||||| | |||||||||||||| || Sbjct 2331 GCTTGTTGCCCCTATGCCTACTGCGTCTACTGCTCAAATTATGGGAAACAACGAATCTTT 2390 Query 124259 CGAGCCGT---TCACTAACAATTTGTACGTGCGACGAGTGTTAGCCGGCGATTTTCAAGT 124315 |||||| | ||| ||| |||| ||| ||||||| | | || || || || || Sbjct 2391 CGAGCCCTATACCACGAAC-ATTTATAC--CAGACGAGTTCTGTCTGGTGAATTCCAGGT 2447 Query 124316 GATAAATCATCATTTGGTGGACGACTTGGTGGCGTTAAATTTGTACGATGAAAACATGCG 124375 | | || ||||||||| || ||||| | | | | |||| ||||| ||||| Sbjct 2448 GGTCAACCATCATTTGTTGAGGGACTTAACTGAGCTCGACTTGTGGGATGACGACATGAA 2507 Query 124376 CAACGAAATTATTGCGGCCGGTGGCAGCGTGCAGCGCATCGCTTCGATTCCGGAACACGT 124435 ||| | || ||| | | | ||| | | || | || | | ||||| | | || Sbjct 2508 GAACCAGATCATTTCCAGCAGGGGCTCCATCCAAGGTATTGAGACCATTCCCCAGAAAGT 2567 Query 124436 CAAGCAACTGTACAAAACCGTGTGGGAAAT----GAAAAATAAACGATTAATTGAAATGG 124491 | || |||||||| ||||||||||| | || | || |||| |||||| Sbjct 2568 TCGCGATCTTTACAAAACTGTGTGGGAAATCTCAGTGAAGTCCAC----AATTAAAATGG 2623 Query 124492 CCGTCGACCGAGGCGCGTACACGGATCAAAGTCAATCTTTTAACGTGTTTGTAGCGGAAC 124551 ||| || || || |||| | || |||||||| || || || | ||| || || | Sbjct 2624 CCGCTGATCGTGGGGCGTTTATAGACCAAAGTCAGTCGTTCAATATTCATGTGGCTGAGC 2683 Query 124552 CCACCTACGCCCGCATGACCAGCATACACATGCACGCGTGGAGCAGC-GGACTCAAAACG 124610 | | ||| | |||| ||| ||| | || | |||| ||| ||||| || || Sbjct 2684 CAAACTATGGAAAATTGACGTCCATTCACTTTTACTCTTGGA-AAGCTGGACTTAAGACC 2742 Query 124611 GGCATGTATTACTTAAGAACCAAACCGGCGGCCGATGCCATTCAATTTACCGTCGACAA 124669 || ||||| ||| | | || || || || ||| |||| ||||| || ||||| || || Sbjct 2743 GGAATGTACTACCTGCGCACAAAGCCAGCCGCCAATGCAATTCAGTTCACCGTAGATAA 2801 >seq22190 Length=927835 Score = 100 bits (110), Expect = 3e-16 Identities = 146/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197 || || || || ||||| ||||| || || ||| | ||| ||| |||| ||| Sbjct 837272 TGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGACAAGGTGCGTCCATCTTCCAGCTGT 837213 Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257 ||||| ||| | |||||||| |||||||| || ||||| || || || || || || || Sbjct 837212 TTTCCGGCGAAGATCAATCGCTGCTGGTCTGGGGGAATTCCCTCCTTGTCCTGGATCTTG 837153 Query 45258 TGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGT 45316 || | || | || | ||| ||||||| ||| || || | ||| | || |||||||| Sbjct 837152 GCCTTCA-CGTTCTCAATGGTATCGGAAGGCTCAACCTCCAAAGTGATGGTCTTGCCGGT 837094 Query 45317 TAGAGTTTTTACAAAAATTTGCAT 45340 | ||| || |||||||||||||| Sbjct 837093 CAAAGTCTTCACAAAAATTTGCAT 837070 Score = 89.7 bits (98), Expect = 5e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173 || || || || | || || | ||||| || || ||||| ||||| || || ||| Sbjct 837751 CCACCACGCAGACGCAGGACCAAATGCAAAGTGGACTCCTTCTGGATGTTGTAGTCGGAC 837692 Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233 | ||| || ||||| || || || || | ||||| || |||||||| || ||| Sbjct 837691 AAGGTGCGTCCGTCCTCCAACTGCTTGCCAGCAAAGATCAAACGCTGCTGGTCTGGGGGA 837632 Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGAC 45292 |||||||| || || || ||||| || | || | || | ||| ||||| | |||||| Sbjct 837631 ATGCCTTCCTTGTCCTGGATTTTAGCCTTCA-CGTTCTCAATGGTATCGGAGGGCTCGAC 837573 Query 45293 TTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || || | || ||||| || ||||| || ||||| || ||||| Sbjct 837572 CTCAAGGGTGATGGTCTTGCCAGTGAGAGTCTTGACAAAGATCTGCAT 837525 Score = 82.4 bits (90), Expect = 7e-11 Identities = 143/204 (70%), Gaps = 3/204 (1%) Strand=Plus/Minus Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197 || || || || ||||| ||||| || || ||| | ||| || ||||| || Sbjct 837499 TGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGACAAGGTGCGTCCGTCCTCCAACTGC 837440 Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257 || || || | ||||| || |||||||| || ||||||||||| || || || ||||| Sbjct 837439 TTGCCAGCAAAGATCAAACGCTGCTGGTCTGGGGGAATGCCTTCCTTGTCCTGGATTTTA 837380 Query 45258 TGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGT 45316 || | || | || | ||| ||||| | |||||| || || || | || ||||| || Sbjct 837379 GCCTTCA-CGTTCTCGATGGTATCGGAGGGCTCGACCTCAAG-GTGATGGTCTTGCCAGT 837322 Query 45317 TAGAGTTTTTACAAAAATTTGCAT 45340 ||||| || ||||| || ||||| Sbjct 837321 GAGAGTCTTGACAAAGATCTGCAT 837298 >seq5502 Length=68615 Score = 100 bits (110), Expect = 3e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || |||||||| | | || | || || || |||||||| ||||| || || ||| Sbjct 6501 ATGCCACCGCGGAGTCGGAGAACCAAGTGAAGGGTGGATTCCTTCTGGATGTTGTAGTCG 6560 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | ||| ||| ||||| || ||||| ||| | || | || ||||| || || Sbjct 6561 GAAAGGGTGCGGCCATCTTCCAACTGCTTTCCAGCGAAAATGAGACGCTGCTGATCTGGG 6620 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 ||||| || || ||||| ||||| || || | ||| | |||||| || | ||| Sbjct 6621 GGAATTCCCTCCTTATCCTGAATCTTAGCCTTCACATTTTCAATGGTGTCAGATGGCTCC 6680 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||||||||| | ||||| ||||| | || ||||| || |||||||| Sbjct 6681 ACTTCGAGAGTGATGGTTTTTCCGGTCAAGGTCTTTACGAAGATTTGCAT 6730 Score = 93.3 bits (102), Expect = 4e-14 Identities = 163/233 (70%), Gaps = 6/233 (3%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 |||||||||||||| | | ||| | |||| || || ||||| ||||| ||||||||| Sbjct 5817 ATTCCTCCGCGGAGACGGAGCACCAAGTGCAAAGTGGACTCCTTCTGGATGTTATAATCG 5876 Query 45171 CTGACGGTTTTAG--AATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCG 45228 ||| | | | ||| ||||| || || || ||| | ||||| || ||||| || | Sbjct 5877 --GACAGAGTGCGTCCATCTTCCAACTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTG 5934 Query 45229 GCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGAC 45287 | ||||| || || || || || || || || | || | || | ||| || || | Sbjct 5935 GGGGAATTCCCTCCTTGTCCTGGATCTTGGCCTTCA-CGTTCTCAATGGTATCAGAGGGT 5993 Query 45288 TCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 |||||||| | || | ||||| ||||| | || ||||| || |||||||| Sbjct 5994 TCGACTTCCAAGGTGATGGTTTTTCCGGTCAAGGTCTTTACGAAGATTTGCAT 6046 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451874271737240