Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20rhopaloa_20[refseq_20GCF_5F000236305.1_202013-02-22]
22,819 sequences; 197,375,704 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq8502 194 2e-44
seq1813 190 2e-43
seq8501 176 4e-39
seq22190 100 3e-16
seq5502 100 3e-16
>seq8502
Length=4749
Score = 194 bits (214), Expect = 2e-44
Identities = 1166/1856 (63%), Gaps = 47/1856 (3%)
Strand=Plus/Minus
Query 122841 TACAAATATTTTGGATACAAAACGTTAGAAAACGGATATTTGaaaaaaaTCGAGGAAAAG 122900
||||| |||||||||| |||||| | ||| ||| || || | | | ||||
Sbjct 2990 TACAACTATTTTGGATTCAAAACCCTCGAACGTTCTTATCTGCTGAAGAGAAATGGAAAG 2931
Query 122901 GTCGCCGAACGTATTCAACATATGCTCATGCGCGTCGCTATAGGCGTGCACGGACGCGAC 122960
||||||| ||| ||||| ||| | |||||||| || ||||| | || ||| ||
Sbjct 2930 ATCGCCGAGCGTCCGCAACACATGTTGATGCGCGTGGCAATAGGAATCCATGGAGAGGAT 2871
Query 122961 ATCGAAAACGCGACCG---AAACTTACGATTTGATGTCTCAAAAATTTTTCACGCACGCG 123017
|| || ||| ||| |||| ||| | | ||||| | ||| ||||| |||||
Sbjct 2870 ATTGAT---GCGGCCGTGGAAACCTACAACCTTTTGTCTGAGCGATTCTTCACCCACGCA 2814
Query 123018 AGTCCCACTTTGTTCGCCGCCGGCACGAAGTTGCCTCAGTTGTCTTCGTGTTTTTTGCTC 123077
|| || | || ||||| | ||| || || ||| ||||||| ||||| | |
Sbjct 2813 TCGCCAACGCTTTTTGCCGCTGCCACAAATCGCCCGCAGCTGTCTTCCTGTTTCCTTTTG 2754
Query 123078 ACCTTGCGCGAAGACAGCATCACCGGTATCTATGAAACTTTGCGCGATTGCGCGTTGATT 123137
||| || | ||| ||| || |||| | || | || | ||||| ||||
Sbjct 2753 ACCATGACGGCTGACTCGATCGAGGGCATCTTTAAATCGGTGGAACACTGCGCCATGATC 2694
Query 123138 TCCAAATTTGGCGGCGGCATAGGCGTGAACGTGCACGACGTAAGAGGCCGCGGAAGCCGC 123197
|| |||| | || ||||| || |||| || || | | | | || | |
Sbjct 2693 TCGAAATCGGCAGGTGGCATTGGACTGAATGTTCATTGCATCCGGGCAAAAGGCACCTCT 2634
Query 123198 ATCAGAAGCACCGACGGAATCGCCTCCGGGCTCGAATCCATGCTGCGAGTTTACAATAAC 123257
|| | |||| | || | || || || | |||||||| | || | ||| ||
Sbjct 2633 ATTTGCGGCACGAATGGCACTTCCAATGGCCTAGTTCCCATGCTGAGGGTCTTCAACAAT 2574
Query 123258 GCCGTGCGGCACGTCGACCAGGG---CGGCAAACGCAAAGGCGCGATGGCGATCTATCTA 123314
| | || | || || ||||| |||||| || || || | || || || ||
Sbjct 2573 GTGGCACGCTATGTGGATCAGGGTGGCGGCAAGCGTCCCGGTGCCTTTGCCATTTACCTG 2514
Query 123315 GAACCGTGGCACGTTGATGTGTACGATTTTTTAAATTTAAAACGCAACATGGGGGCGGAA 123374
|| || |||||| ||||| | || ||| | | | || |||| || |||
Sbjct 2513 GAGCCCTGGCACTCGGATGTCTTTGAGTTTCTGGAACTCAAGAAAAACACTGGCAAGGAG 2454
Query 123375 GAAAAGAAAGCCCGCGATTTGTTGTACGCTTTATGGGTACCCGATTTGTTTATGCGACGC 123434
|| || ||||||||| |||| ||||| | ||| |||||||| | || ||| ||||
Sbjct 2453 GAGAATCGCGCCCGCGATCTGTTTTACGCCCTTTGGATACCCGATCTCTTCATGAAACGC 2394
Query 123435 GTAAAAGACGACGGCGTGTGGTCGCTCATGTGTCCCGATCGGTGTCCCGGCTTGAGCGAC 123494
|| | | | | | |||||||| ||||| || | || || ||| || |||
Sbjct 2393 GTCGAGGCCAATGAGAATTGGTCGCTGATGTGCCCGCACAAATGCCCGGGCCTGCACGAT 2334
Query 123495 GTTTACGGCAATCAGTTTGACGAGTTGTACGCGCAATACGAGCGCGAAGG-----CAAAC 123549
|| | ||| || | || || || ||||| | ||||||||| || || | |||
Sbjct 2333 GTCTGGGGCGATGAATTCGAGAAGCTGTACACTAAATACGAGCAAGAGGGTCGTGCGAAC 2274
Query 123550 AGGTTAGTCA-GGTTCCGGCAC-GTGATTTGTTCAAATTTATTATCGAAACACAAGTCGA 123607
| |||| || || | | ||| |||| ||||| || | || || ||
Sbjct 2273 CGAACGGTCAAGGCTCAGTCCTTGTGGTTTGCC-------ATTATTGAGTCGCAGGTGGA 2221
Query 123608 AACCGGAACGCCGTACATGCTCTACAAAGACGCCTGCAACAGGAAAACCAATCAGAGCAA 123667
||| || | ||||| ||||||| ||| || |||||||||||||||| ||| ||| ||
Sbjct 2220 AACTGGCAACCCGTATATGCTCTTCAAGGATGCCTGCAACAGGAAAAGCAACCAGCAGAA 2161
Query 123668 CTTGGGAACAATAAAATGTAGTAATCTTTGCTCCGAAATTATCGAATACAGCGATGCCGA 123727
| | || || || || || || || | ||| | ||||| | ||||| | | ||
Sbjct 2160 CGTTGGCACCATTAAGTGCAGCAACTTGTGCACAGAAATCGTTGAATATTCCTCGCCGGA 2101
Query 123728 TCAAGTGGCCGTGTGTAATTTGGCTTCGATTTGCGTGAATCGTTGCGTCGAAAACGGCGC 123787
| | | || ||||| || |||| || || | || | ||| | | | | |
Sbjct 2100 TGAGATTGCAGTGTGCAACCTGGCATCCATCGCTCTTAACATGTTTGTC-ACACCCGAGA 2042
Query 123788 T----TTTAATTTCCAAACGCTCAAACGCATAACAAAAACTGTAGTAAAGAATTTGAACA 123843
||| ||||||| | || || | || || || || || ||| | ||||
Sbjct 2041 AAAAATTTGATTTCCAGAAACTTAAGGAAGTTACCAAGACGGTTACCAAAAATCTCAACA 1982
Query 123844 AAATTATCGATGTTAATTTTTATCCTTTGGAGGAAGCGCGTTTGTCTAATTTGAAACACA 123903
| || || ||| | || |||||||| | || || || ||||||| |||
Sbjct 1981 AGATAATTGATATCAACTTTTATCCCCTCCCAGAGGCAAAGAAATCCAATTTGAGACATC 1922
Query 123904 GACCGGTCGGAGTGGGCATTCAAGGGTTGGCCGACGCGTTTGTAATGCTGCGCATGCCGT 123963
| || || || | || |||| || || || ||||| || | | |||| | || |
Sbjct 1921 GTCCCGTGGGCATCGGTGTTCAGGGTTTCGCTGACGCCTTGATTCTCATGCGATTCCCAT 1862
Query 123964 ACGAAAGCGACGAAGCAAAGTTGCTT-AATACGCAAATAGCCGAAACAATTTATTACGGC 124022
| ||||| || ||||| | || ||| ||| ||| ||||| ||||| |||||
Sbjct 1861 ATGAAAGTGAAGAAGCCGGTCTTTTTGAATCAGCAGATATTTGAAACGATTTACTACGGT 1802
Query 124023 GCTTTGGAGGCGAGCTGCGAACTTGCGAAAATTCACGGCGCGTACGAAAGTTACGCGGGC 124082
|| |||| || ||||| ||||| ||| | | | || | || || | || | |||
Sbjct 1801 GCCCTGGAAGCCAGCTGTGAACTGGCGCAGGTCGAAGGTCCCTATGAGACCTATGAGGGA 1742
Query 124083 AGCCCGGCGAGCCGAGGTATTTTGCAGTACGACATGTGGAATGCTACA-CCGACAAATTT 124141
||||| | |||| ||| ||| ||||||||||||||||| | ||| || || || |
Sbjct 1741 AGCCCCGTGAGCAAAGGAATTCTGCAGTACGACATGTGGGACAA-ACAGCCAACGAACCT 1683
Query 124142 GTGGGACTGGAGCGTTTTAAAACAACGCATATCGACGCACGGTTTGCGTAACTCGCTGTT 124201
|||||| ||| |||| | ||| | ||||||| | || ||||| ||| |
Sbjct 1682 GTGGGATTGGCAAAAACTAAAGGAGTCCATCAAAAAGCACGGTGTCCGGAACTCCCTGCT 1623
Query 124202 GGTGGCGTACATGCCGACGGCAACCACTGCTCAAATTTTAGGAAACAACGAATCCTTCGA 124261
|| || ||||| || || | |||||||||||| | |||||||||||||| |||||
Sbjct 1622 TGTTGCCCCTATGCCTACTGCGTCTACTGCTCAAATTATGGGAAACAACGAATCTTTCGA 1563
Query 124262 GCCGT---TCACTAACAATTTGTACGTGCGACGAGTGTTAGCCGGCGATTTTCAAGTGAT 124318
||| | ||| ||| |||| ||| ||||||| | | || || || || ||| |
Sbjct 1562 GCCCTATACCACGAAC-ATTTATAC--CAGACGAGTTCTGTCTGGTGAATTCCAGGTGGT 1506
Query 124319 AAATCATCATTTGGTGGACGACTTGGTGGCGTTAAATTTGTACGATGAAAACATGCGCAA 124378
|| ||||||||| || ||||| | | | | |||| ||||| ||||| ||
Sbjct 1505 CAACCATCATTTGTTGAGGGACTTAACTGAGCTCGACTTGTGGGATGACGACATGAAGAA 1446
Query 124379 CGAAATTATTGCGGCCGGTGGCAGCGTGCAGCGCATCGCTTCGATTCCGGAACACGTCAA 124438
| | || ||| | | | ||| | | || | || | | ||||| | | ||
Sbjct 1445 CCAGATCATTTCCAGCAGGGGCTCCATCCAAGGTATTGAGACCATTCCCCAGAAAGTTCG 1386
Query 124439 GCAACTGTACAAAACCGTGTGGGAAAT----GAAAAATAAACGATTAATTGAAATGGCCG 124494
| || |||||||| ||||||||||| | || | || |||| |||||||||
Sbjct 1385 CGATCTTTACAAAACTGTGTGGGAAATCTCAGTGAAGTCCAC----AATTAAAATGGCCG 1330
Query 124495 TCGACCGAGGCGCGTACACGGATCAAAGTCAATCTTTTAACGTGTTTGTAGCGGAACCCA 124554
|| || || |||| | || |||||||| || || || | ||| || || || |
Sbjct 1329 CTGATCGTGGGGCGTTTATAGACCAAAGTCAGTCGTTCAATATTCATGTGGCTGAGCCAA 1270
Query 124555 CCTACGCCCGCATGACCAGCATACACATGCACGCGTGGAGCAGC-GGACTCAAAACGGGC 124613
||| | |||| ||| ||| | || | |||| ||| ||||| || || ||
Sbjct 1269 ACTATGGAAAATTGACGTCCATTCACTTTTACTCTTGGA-AAGCTGGACTTAAGACCGGA 1211
Query 124614 ATGTATTACTTAAGAACCAAACCGGCGGCCGATGCCATTCAATTTACCGTCGACAA 124669
||||| ||| | | || || || || ||| |||| ||||| || ||||| || ||
Sbjct 1210 ATGTACTACCTGCGCACAAAGCCAGCCGCCAATGCAATTCAGTTCACCGTAGATAA 1155
>seq1813
Length=4749
Score = 190 bits (210), Expect = 2e-43
Identities = 1164/1855 (63%), Gaps = 46/1855 (2%)
Strand=Plus/Minus
Query 122841 TACAAATATTTTGGATACAAAACGTTAGAAAACGGATATTTGaaaaaaaTCGAGGAAAAG 122900
||||| |||||||||| |||||| | ||| ||| || || | | | ||||
Sbjct 2989 TACAACTATTTTGGATTCAAAACCCTCGAACGTTCTTATCTGCTGAAGAGAAATGGAAAG 2930
Query 122901 GTCGCCGAACGTATTCAACATATGCTCATGCGCGTCGCTATAGGCGTGCACGGACGCGAC 122960
||||||| ||| ||||| ||| | |||||||| || ||||| | || ||| ||
Sbjct 2929 ATCGCCGAGCGTCCGCAACACATGTTGATGCGCGTGGCAATAGGAATCCATGGAGAGGAT 2870
Query 122961 ATCGAAAACGCGACCG---AAACTTACGATTTGATGTCTCAAAAATTTTTCACGCACGCG 123017
|| || ||| ||| |||| ||| | | ||||| | ||| ||||| |||||
Sbjct 2869 ATTGAT---GCGGCCGTGGAAACCTACAACCTTTTGTCTGAGCGATTCTTCACCCACGCA 2813
Query 123018 AGTCCCACTTTGTTCGCCGCCGGCACGAAGTTGCCTCAGTTGTCTTCGTGTTTTTTGCTC 123077
|| || | || ||||| | ||| || || ||| ||||||| ||||| | |
Sbjct 2812 TCGCCAACGCTTTTTGCCGCTGCCACAAATCGCCCGCAGCTGTCTTCCTGTTTCCTTTTG 2753
Query 123078 ACCTTGCGCGAAGACAGCATCACCGGTATCTATGAAACTTTGCGCGATTGCGCGTTGATT 123137
||| || | ||| ||| || |||| | || | || | ||||| ||||
Sbjct 2752 ACCATGACGGCTGACTCGATCGAGGGCATCTTTAAATCGGTGGAACACTGCGCCATGATC 2693
Query 123138 TCCAAATTTGGCGGCGGCATAGGCGTGAACGTGCACGACGTAAGAGGCCGCGGAAGCCGC 123197
|| |||| | || ||||| || |||| || || | | | | || | |
Sbjct 2692 TCGAAATCGGCAGGTGGCATTGGACTGAATGTTCATTGCATCCGGGCAAAAGGCACCTCT 2633
Query 123198 ATCAGAAGCACCGACGGAATCGCCTCCGGGCTCGAATCCATGCTGCGAGTTTACAATAAC 123257
|| | |||| | || | || || || | |||||||| | || | ||| ||
Sbjct 2632 ATTTGCGGCACGAATGGCACTTCCAATGGCCTAGTTCCCATGCTGAGGGTCTTCAACAAT 2573
Query 123258 GCCGTGCGGCACGTCGACCAGGG---CGGCAAACGCAAAGGCGCGATGGCGATCTATCTA 123314
| | || | || || ||||| |||||| || || || | || || || ||
Sbjct 2572 GTGGCACGCTATGTGGATCAGGGTGGCGGCAAGCGTCCCGGTGCCTTTGCCATTTACCTG 2513
Query 123315 GAACCGTGGCACGTTGATGTGTACGATTTTTTAAATTTAAAACGCAACATGGGGGCGGAA 123374
|| || |||||| ||||| | || ||| | | | || |||| || |||
Sbjct 2512 GAGCCCTGGCACTCGGATGTCTTTGAGTTTCTGGAACTCAAGAAAAACACTGGCAAGGAG 2453
Query 123375 GAAAAGAAAGCCCGCGATTTGTTGTACGCTTTATGGGTACCCGATTTGTTTATGCGACGC 123434
|| || ||||||||| |||| ||||| | ||| |||||||| | || ||| ||||
Sbjct 2452 GAGAATCGCGCCCGCGATCTGTTTTACGCCCTTTGGATACCCGATCTCTTCATGAAACGC 2393
Query 123435 GTAAAAGACGACGGCGTGTGGTCGCTCATGTGTCCCGATCGGTGTCCCGGCTTGAGCGAC 123494
|| | | | | | |||||||| ||||| || | || || ||| || |||
Sbjct 2392 GTCGAGGCCAATGAGAATTGGTCGCTGATGTGCCCGCACAAATGCCCGGGCCTGCACGAT 2333
Query 123495 GTTTACGGCAATCAGTTTGACGAGTTGTACGCGCAATACGAGCGCGAAGG-----CAAAC 123549
|| | ||| || | || || || ||||| | ||||||||| || || | |||
Sbjct 2332 GTCTGGGGCGATGAATTCGAGAAGCTGTACACTAAATACGAGCAAGAGGGTCGTGCGAAC 2273
Query 123550 AGGTTAGTCA-GGTTCCGGCAC-GTGATTTGTTCAAATTTATTATCGAAACACAAGTCGA 123607
| |||| || || | | ||| |||| ||||| || | || || ||
Sbjct 2272 CGAACGGTCAAGGCTCAGTCCTTGTGGTTTGCC-------ATTATTGAGTCGCAGGTGGA 2220
Query 123608 AACCGGAACGCCGTACATGCTCTACAAAGACGCCTGCAACAGGAAAACCAATCAGAGCAA 123667
||| || | ||||| ||||||| ||| || |||||||||||||||| ||| ||| ||
Sbjct 2219 AACTGGCAACCCGTATATGCTCTTCAAGGATGCCTGCAACAGGAAAAGCAACCAGCAGAA 2160
Query 123668 CTTGGGAACAATAAAATGTAGTAATCTTTGCTCCGAAATTATCGAATACAGCGATGCCGA 123727
| | || || || || || || || | ||| | ||||| | ||||| | | ||
Sbjct 2159 CGTTGGCACCATTAAGTGCAGCAACTTGTGCACAGAAATCGTTGAATATTCCTCGCCGGA 2100
Query 123728 TCAAGTGGCCGTGTGTAATTTGGCTTCGATTTGCGTGAATCGTTGCGTCGAAAACGGCGC 123787
| | | || ||||| || |||| || || | || | ||| | | | | |
Sbjct 2099 TGAGATTGCAGTGTGCAACCTGGCATCCATCGCTCTTAACATGTTTGTC-ACACCCGAGA 2041
Query 123788 T----TTTAATTTCCAAACGCTCAAACGCATAACAAAAACTGTAGTAAAGAATTTGAACA 123843
||| ||||||| | || || | || || || || || ||| | ||||
Sbjct 2040 AAAAATTTGATTTCCAGAAACTTAAGGAAGTTACCAAGACGGTTACCAAAAATCTCAACA 1981
Query 123844 AAATTATCGATGTTAATTTTTATCCTTTGGAGGAAGCGCGTTTGTCTAATTTGAAACACA 123903
| || || ||| | || |||||||| | || || || ||||||| |||
Sbjct 1980 AGATAATTGATATCAACTTTTATCCCCTCCCAGAGGCAAAGAAATCCAATTTGAGACATC 1921
Query 123904 GACCGGTCGGAGTGGGCATTCAAGGGTTGGCCGACGCGTTTGTAATGCTGCGCATGCCGT 123963
| || || || | || |||| || || || ||||| || | | |||| | || |
Sbjct 1920 GTCCCGTGGGCATCGGTGTTCAGGGTTTCGCTGACGCCTTGATTCTCATGCGATTCCCAT 1861
Query 123964 ACGAAAGCGACGAAGCAAAGTTGCTTAATACGCAAATAGCCGAAACAATTTATTACGGCG 124023
| ||||| || || || | | ||| ||| ||| ||||| ||||| ||||| |
Sbjct 1860 ATGAAAGTGAAGAGGCCGGTCTTTTGAATCAGCAGATATTTGAAACGATTTACTACGGTG 1801
Query 124024 CTTTGGAGGCGAGCTGCGAACTTGCGAAAATTCACGGCGCGTACGAAAGTTACGCGGGCA 124083
| |||| || ||||| ||||| ||| | | | || | || || | || | ||| |
Sbjct 1800 CCCTGGAAGCCAGCTGTGAACTGGCGCAGGTCGAAGGTCCCTATGAGACCTATGAGGGAA 1741
Query 124084 GCCCGGCGAGCCGAGGTATTTTGCAGTACGACATGTGGAATGCTACA-CCGACAAATTTG 124142
|||| | |||| ||| ||| ||||||||||||||||| | ||| || || || ||
Sbjct 1740 GCCCCGTGAGCAAAGGAATTCTGCAGTACGACATGTGGGACAA-ACAGCCAACGAACCTG 1682
Query 124143 TGGGACTGGAGCGTTTTAAAACAACGCATATCGACGCACGGTTTGCGTAACTCGCTGTTG 124202
||||| ||| |||| | ||| | ||||||| | || ||||| ||| |
Sbjct 1681 TGGGATTGGCAAAAACTAAAGGAGTCCATCAAAAAGCACGGTGTCCGGAACTCCCTGCTT 1622
Query 124203 GTGGCGTACATGCCGACGGCAACCACTGCTCAAATTTTAGGAAACAACGAATCCTTCGAG 124262
|| || ||||| || || | |||||||||||| | |||||||||||||| ||||||
Sbjct 1621 GTTGCCCCTATGCCTACTGCGTCTACTGCTCAAATTATGGGAAACAACGAATCTTTCGAG 1562
Query 124263 CCGT---TCACTAACAATTTGTACGTGCGACGAGTGTTAGCCGGCGATTTTCAAGTGATA 124319
|| | ||| ||| |||| ||| ||||||| | | || || || || ||| |
Sbjct 1561 CCCTATACCACGAAC-ATTTATAC--CAGACGAGTTCTGTCTGGTGAATTCCAGGTGGTC 1505
Query 124320 AATCATCATTTGGTGGACGACTTGGTGGCGTTAAATTTGTACGATGAAAACATGCGCAAC 124379
|| ||||||||| || ||||| | | | | |||| ||||| ||||| |||
Sbjct 1504 AACCATCATTTGTTGAGGGACTTAACTGAGCTCGACTTGTGGGATGACGACATGAAGAAC 1445
Query 124380 GAAATTATTGCGGCCGGTGGCAGCGTGCAGCGCATCGCTTCGATTCCGGAACACGTCAAG 124439
| || ||| | | | ||| | | || | || | | ||||| | | ||
Sbjct 1444 CAGATCATTTCCAGCAGGGGCTCCATCCAAGGTATTGAGACCATTCCCCAGAAAGTTCGC 1385
Query 124440 CAACTGTACAAAACCGTGTGGGAAAT----GAAAAATAAACGATTAATTGAAATGGCCGT 124495
| || |||||||| ||||||||||| | || | || |||| |||||||||
Sbjct 1384 GATCTTTACAAAACTGTGTGGGAAATCTCAGTGAAGTCCAC----AATTAAAATGGCCGC 1329
Query 124496 CGACCGAGGCGCGTACACGGATCAAAGTCAATCTTTTAACGTGTTTGTAGCGGAACCCAC 124555
|| || || |||| | || |||||||| || || || | ||| || || || |
Sbjct 1328 TGATCGTGGGGCGTTTATAGACCAAAGTCAGTCGTTCAATATTCATGTGGCTGAGCCAAA 1269
Query 124556 CTACGCCCGCATGACCAGCATACACATGCACGCGTGGAGCAGC-GGACTCAAAACGGGCA 124614
||| | |||| ||| ||| | || | |||| ||| ||||| || || || |
Sbjct 1268 CTATGGAAAATTGACGTCCATTCACTTTTACTCTTGGA-AAGCTGGACTTAAGACCGGAA 1210
Query 124615 TGTATTACTTAAGAACCAAACCGGCGGCCGATGCCATTCAATTTACCGTCGACAA 124669
|||| ||| | | || || || || ||| |||| ||||| || ||||| || ||
Sbjct 1209 TGTACTACCTGCGCACAAAGCCAGCCGCCAATGCAATTCAGTTCACCGTAGATAA 1155
>seq8501
Length=20033
Score = 176 bits (194), Expect = 4e-39
Identities = 1167/1859 (63%), Gaps = 52/1859 (3%)
Strand=Plus/Plus
Query 122841 TACAAATATTTTGGATACAAAACGTTAGAAAACGGATATTTGaaaaaaaTCGAGGAAAAG 122900
||||| |||||||||| |||||| | ||| ||| || || | | | ||||
Sbjct 965 TACAACTATTTTGGATTCAAAACCCTCGAACGTTCTTATCTGCTGAAGAGAAATGGAAAG 1024
Query 122901 GTCGCCGAACGTATTCAACATATGCTCATGCGCGTCGCTATAGGCGTGCACGGACGCGAC 122960
||||||| ||| ||||| ||| | |||||||| || ||||| | || ||| ||
Sbjct 1025 ATCGCCGAGCGTCCGCAACACATGTTGATGCGCGTGGCAATAGGAATCCATGGAGAGGAT 1084
Query 122961 ATCGAAAACGCGACCG---AAACTTACGATTTGATGTCTCAAAAATTTTTCACGCACGCG 123017
|| || ||| ||| |||| ||| | | ||||| | ||| ||||| |||||
Sbjct 1085 ATTGAT---GCGGCCGTGGAAACCTACAACCTTTTGTCTGAGCGATTCTTCACCCACGCA 1141
Query 123018 AGTCCCACTTTGTTCGCCGCCGGCACGAAGTTGCCTCAGTTGTCTTCGTGTTTTTTGCTC 123077
|| || | || ||||| | ||| || || ||| ||||||| ||||| | |
Sbjct 1142 TCGCCAACGCTTTTTGCCGCTGCCACAAATCGCCCGCAGCTGTCTTCCTGTTTCCTTTTG 1201
Query 123078 ACCTTGCGCGAAGACAGCATCACCGGTATCTATGAAACTTTGCGCGATTGCGCGTTGATT 123137
||| || | ||| ||| || |||| | || | || | ||||| ||||
Sbjct 1202 ACCATGACGGCTGACTCGATCGAGGGCATCTTTAAATCGGTGGAACACTGCGCCATGATC 1261
Query 123138 TCCAAATTTGGCGGCGGCATAGGCGTGAACGTGCACGACGTAAGAGGCCGCGGAAGCCGC 123197
|| |||| | || ||||| || |||| || || | | | | || | |
Sbjct 1262 TCGAAATCGGCAGGTGGCATTGGACTGAATGTTCATTGCATCCGGGCAAAAGGCACCTCT 1321
Query 123198 ATCAGAAGCACCGACGGAATCGCCTCCGGGCTCGAATCCATGCTGCGAGTTTACAATAAC 123257
|| | |||| | || | || || || | |||||||| | || | ||| ||
Sbjct 1322 ATTTGCGGCACGAATGGCACTTCCAATGGCCTAGTTCCCATGCTGAGGGTCTTCAACAAT 1381
Query 123258 GCCGTGCGGCACGTCGACCAGGG---CGGCAAACGCAAAGGCGCGATGGCGATCTATCTA 123314
| | || | || || ||||| |||||| || || || | || || || ||
Sbjct 1382 GTGGCACGCTATGTGGATCAGGGTGGCGGCAAGCGTCCCGGTGCCTTTGCCATTTACCTG 1441
Query 123315 GAACCGTGGCACGTTGATGTGTACGATTTTTTA-AATTTAAAACGCAACATGGGGGCGGA 123373
|| || |||||| ||||| | || ||| | || | | || |||| || |||
Sbjct 1442 GAGCCCTGGCACTCGGATGTCTTTGAGTTTCTGGAACTCAGAAA--AACACTGGCAAGGA 1499
Query 123374 AGAAAAGAAAGCCCGCGATTTGTTGTACGCTTTATGGGTACCCGATTTGTTTATGCGACG 123433
|| || ||||||||| |||| ||||| | ||| |||||||| | || ||| |||
Sbjct 1500 GGAGAATCGCGCCCGCGATCTGTTTTACGCCCTTTGGATACCCGATCTCTTCATGAAACG 1559
Query 123434 CGTAAAAGACGACGGCGTGTGGTCGCTCATGTGTCCCGATCGGTGTCCCGGCTTGAGCGA 123493
||| | | | | | |||||||| ||||| || | || || ||| || |||
Sbjct 1560 CGTCGAGGCCAATGAGAATTGGTCGCTGATGTGCCCGCACAAATGCCCGGGCCTGCACGA 1619
Query 123494 CGTTTACGGCAATCAGTTTGACGAGTTGTACGCGCAATACGAGCGCGAAGG-----CAAA 123548
|| | ||| || | || || || ||||| | ||||||||| || || | ||
Sbjct 1620 TGTCTGGGGCGATGAATTCGAGAAGCTGTACACTAAATACGAGCAAGAGGGTCGTGCGAA 1679
Query 123549 CAGGTTAGTCA-GGTTCCGGCAC-GTGATTTGTTCAAATTTATTATCGAAACACAAGTCG 123606
| | |||| || || | | ||| |||| ||||| || | || || |
Sbjct 1680 CCGAACGGTCAAGGCTCAGTCCTTGTGGTTTGCC-------ATTATTGAGTCGCAGGTGG 1732
Query 123607 AAACCGGAACGCCGTACATGCTCTACAAAGACGCCTGCAACAGGAAAACCAATCAGAGCA 123666
|||| || | ||||| ||||||| ||| || |||||||||||||||| ||| ||| |
Sbjct 1733 AAACTGGCAACCCGTATATGCTCTTCAAGGATGCCTGCAACAGGAAAAGCAACCAGCAGA 1792
Query 123667 ACTTGGGAACAATAAAATGTAGTAATCTTTGCTCCGAAATTATCGAATACAGCGATGCCG 123726
|| | || || || || || || || | ||| | ||||| | ||||| | | |
Sbjct 1793 ACGTTGGCACCATTAAGTGCAGCAACTTGTGCACAGAAATCGTTGAATATTCCTCGCCGG 1852
Query 123727 ATCAAGTGGCCGTGTGTAATTTGGCTTCGATTTGCGTGAATCGTTGCGTCGAAAACGGCG 123786
|| | | || ||||| || |||| || || | || | ||| | | | | |
Sbjct 1853 ATGAGATTGCAGTGTGCAACCTGGCATCCATCGCTCTTAACATGTTTGTC-ACACCCGAG 1911
Query 123787 CT----TTTAATTTCCAAACGCTCAAACGCATAACAAAAACTGTAGTAAAGAATTTGAAC 123842
||| ||||||| | || || | || || || || || ||| | |||
Sbjct 1912 AAAAAATTTGATTTCCAGAAACTTAAGGAAGTTACCAAGACGGTTACCAAAAATCTCAAC 1971
Query 123843 AAAATTATCGATGTTAATTTTTATCCTTTGGAGGAAGCGCGTTTGTCTAATTTGAAACAC 123902
|| || || ||| | || |||||||| | || || || ||||||| |||
Sbjct 1972 AAGATAATTGATATCAACTTTTATCCCCTCCCAGAGGCAAAGAAATCCAATTTGAGACAT 2031
Query 123903 AGACCGGTCGGAGTGGGCATTCAAGGGTTGGCCGACGCGTTTGTAATGCTGCGCATGCCG 123962
| || || || | || |||| || || || ||||| || | | |||| | ||
Sbjct 2032 CGTCCCGTGGGCATCGGTGTTCAGGGTTTCGCTGACGCCTTGATTCTCATGCGATTCCCA 2091
Query 123963 TACGAAAGCGACGAAGCAAAGTTGCTTAATACGCAAATAGCCGAAACAATTTATTACGGC 124022
|| ||||| || ||||| | | ||| ||| ||| ||||| ||||| |||||
Sbjct 2092 TATGAAAGTGAAGAAGCCGGTCTTTTGAATCAGCAGATATTTGAAACGATTTACTACGGT 2151
Query 124023 GCTTTGGAGGCGAGCTGCGAACTTGCGAAAATTCACGGCGCGTACGAA-AGTTACGCGGG 124081
|| |||| || ||||| ||||| ||| | | | || | || || | || | |||
Sbjct 2152 GCCCTGGAAGCCAGCTGTGAACTGGCGCAGGTCGAAGGTCCCTATGAGTACCTATGAGGG 2211
Query 124082 CA-GCCCGGCGAGCCGAGGTATTTT-GCAGTACGACATGTGGAATGCTACA-CCGACAAA 124138
| |||| | |||| ||| ||| | |||||||||||||||| | ||| || || ||
Sbjct 2212 TAAGCCCCGTGAGCAAAGGAATTCTAGCAGTACGACATGTGGGACAA-ACAGCCAACGAA 2270
Query 124139 TTTGTGGGACTGGAGCGTTTTAAAACAACGCATATCGACGCACGGTTTGCGTAACTCGCT 124198
||||||| ||| |||| | ||| | ||||||| | || ||||| ||
Sbjct 2271 CCTGTGGGATTGGCAAAAACTAAAGGAGTCCATCAAAAAGCACGGTGTCCGGAACTCCCT 2330
Query 124199 GTTGGTGGCGTACATGCCGACGGCAACCACTGCTCAAATTTTAGGAAACAACGAATCCTT 124258
| | || || ||||| || || | |||||||||||| | |||||||||||||| ||
Sbjct 2331 GCTTGTTGCCCCTATGCCTACTGCGTCTACTGCTCAAATTATGGGAAACAACGAATCTTT 2390
Query 124259 CGAGCCGT---TCACTAACAATTTGTACGTGCGACGAGTGTTAGCCGGCGATTTTCAAGT 124315
|||||| | ||| ||| |||| ||| ||||||| | | || || || || ||
Sbjct 2391 CGAGCCCTATACCACGAAC-ATTTATAC--CAGACGAGTTCTGTCTGGTGAATTCCAGGT 2447
Query 124316 GATAAATCATCATTTGGTGGACGACTTGGTGGCGTTAAATTTGTACGATGAAAACATGCG 124375
| | || ||||||||| || ||||| | | | | |||| ||||| |||||
Sbjct 2448 GGTCAACCATCATTTGTTGAGGGACTTAACTGAGCTCGACTTGTGGGATGACGACATGAA 2507
Query 124376 CAACGAAATTATTGCGGCCGGTGGCAGCGTGCAGCGCATCGCTTCGATTCCGGAACACGT 124435
||| | || ||| | | | ||| | | || | || | | ||||| | | ||
Sbjct 2508 GAACCAGATCATTTCCAGCAGGGGCTCCATCCAAGGTATTGAGACCATTCCCCAGAAAGT 2567
Query 124436 CAAGCAACTGTACAAAACCGTGTGGGAAAT----GAAAAATAAACGATTAATTGAAATGG 124491
| || |||||||| ||||||||||| | || | || |||| ||||||
Sbjct 2568 TCGCGATCTTTACAAAACTGTGTGGGAAATCTCAGTGAAGTCCAC----AATTAAAATGG 2623
Query 124492 CCGTCGACCGAGGCGCGTACACGGATCAAAGTCAATCTTTTAACGTGTTTGTAGCGGAAC 124551
||| || || || |||| | || |||||||| || || || | ||| || || |
Sbjct 2624 CCGCTGATCGTGGGGCGTTTATAGACCAAAGTCAGTCGTTCAATATTCATGTGGCTGAGC 2683
Query 124552 CCACCTACGCCCGCATGACCAGCATACACATGCACGCGTGGAGCAGC-GGACTCAAAACG 124610
| | ||| | |||| ||| ||| | || | |||| ||| ||||| || ||
Sbjct 2684 CAAACTATGGAAAATTGACGTCCATTCACTTTTACTCTTGGA-AAGCTGGACTTAAGACC 2742
Query 124611 GGCATGTATTACTTAAGAACCAAACCGGCGGCCGATGCCATTCAATTTACCGTCGACAA 124669
|| ||||| ||| | | || || || || ||| |||| ||||| || ||||| || ||
Sbjct 2743 GGAATGTACTACCTGCGCACAAAGCCAGCCGCCAATGCAATTCAGTTCACCGTAGATAA 2801
>seq22190
Length=927835
Score = 100 bits (110), Expect = 3e-16
Identities = 146/204 (72%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197
|| || || || ||||| ||||| || || ||| | ||| ||| |||| |||
Sbjct 837272 TGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGACAAGGTGCGTCCATCTTCCAGCTGT 837213
Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257
||||| ||| | |||||||| |||||||| || ||||| || || || || || || ||
Sbjct 837212 TTTCCGGCGAAGATCAATCGCTGCTGGTCTGGGGGAATTCCCTCCTTGTCCTGGATCTTG 837153
Query 45258 TGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGT 45316
|| | || | || | ||| ||||||| ||| || || | ||| | || ||||||||
Sbjct 837152 GCCTTCA-CGTTCTCAATGGTATCGGAAGGCTCAACCTCCAAAGTGATGGTCTTGCCGGT 837094
Query 45317 TAGAGTTTTTACAAAAATTTGCAT 45340
| ||| || ||||||||||||||
Sbjct 837093 CAAAGTCTTCACAAAAATTTGCAT 837070
Score = 89.7 bits (98), Expect = 5e-13
Identities = 158/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173
|| || || || | || || | ||||| || || ||||| ||||| || || |||
Sbjct 837751 CCACCACGCAGACGCAGGACCAAATGCAAAGTGGACTCCTTCTGGATGTTGTAGTCGGAC 837692
Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233
| ||| || ||||| || || || || | ||||| || |||||||| || |||
Sbjct 837691 AAGGTGCGTCCGTCCTCCAACTGCTTGCCAGCAAAGATCAAACGCTGCTGGTCTGGGGGA 837632
Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGAC 45292
|||||||| || || || ||||| || | || | || | ||| ||||| | ||||||
Sbjct 837631 ATGCCTTCCTTGTCCTGGATTTTAGCCTTCA-CGTTCTCAATGGTATCGGAGGGCTCGAC 837573
Query 45293 TTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || || | || ||||| || ||||| || ||||| || |||||
Sbjct 837572 CTCAAGGGTGATGGTCTTGCCAGTGAGAGTCTTGACAAAGATCTGCAT 837525
Score = 82.4 bits (90), Expect = 7e-11
Identities = 143/204 (70%), Gaps = 3/204 (1%)
Strand=Plus/Minus
Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197
|| || || || ||||| ||||| || || ||| | ||| || ||||| ||
Sbjct 837499 TGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGACAAGGTGCGTCCGTCCTCCAACTGC 837440
Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257
|| || || | ||||| || |||||||| || ||||||||||| || || || |||||
Sbjct 837439 TTGCCAGCAAAGATCAAACGCTGCTGGTCTGGGGGAATGCCTTCCTTGTCCTGGATTTTA 837380
Query 45258 TGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGT 45316
|| | || | || | ||| ||||| | |||||| || || || | || ||||| ||
Sbjct 837379 GCCTTCA-CGTTCTCGATGGTATCGGAGGGCTCGACCTCAAG-GTGATGGTCTTGCCAGT 837322
Query 45317 TAGAGTTTTTACAAAAATTTGCAT 45340
||||| || ||||| || |||||
Sbjct 837321 GAGAGTCTTGACAAAGATCTGCAT 837298
>seq5502
Length=68615
Score = 100 bits (110), Expect = 3e-16
Identities = 160/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| || |||||||| | | || | || || || |||||||| ||||| || || |||
Sbjct 6501 ATGCCACCGCGGAGTCGGAGAACCAAGTGAAGGGTGGATTCCTTCTGGATGTTGTAGTCG 6560
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
| ||| ||| ||||| || ||||| ||| | || | || ||||| || ||
Sbjct 6561 GAAAGGGTGCGGCCATCTTCCAACTGCTTTCCAGCGAAAATGAGACGCTGCTGATCTGGG 6620
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290
||||| || || ||||| ||||| || || | ||| | |||||| || | |||
Sbjct 6621 GGAATTCCCTCCTTATCCTGAATCTTAGCCTTCACATTTTCAATGGTGTCAGATGGCTCC 6680
Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
||||||||||| | ||||| ||||| | || ||||| || ||||||||
Sbjct 6681 ACTTCGAGAGTGATGGTTTTTCCGGTCAAGGTCTTTACGAAGATTTGCAT 6730
Score = 93.3 bits (102), Expect = 4e-14
Identities = 163/233 (70%), Gaps = 6/233 (3%)
Strand=Plus/Plus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|||||||||||||| | | ||| | |||| || || ||||| ||||| |||||||||
Sbjct 5817 ATTCCTCCGCGGAGACGGAGCACCAAGTGCAAAGTGGACTCCTTCTGGATGTTATAATCG 5876
Query 45171 CTGACGGTTTTAG--AATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCG 45228
||| | | | ||| ||||| || || || ||| | ||||| || ||||| || |
Sbjct 5877 --GACAGAGTGCGTCCATCTTCCAACTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTG 5934
Query 45229 GCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGAC 45287
| ||||| || || || || || || || || | || | || | ||| || || |
Sbjct 5935 GGGGAATTCCCTCCTTGTCCTGGATCTTGGCCTTCA-CGTTCTCAATGGTATCAGAGGGT 5993
Query 45288 TCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|||||||| | || | ||||| ||||| | || ||||| || ||||||||
Sbjct 5994 TCGACTTCCAAGGTGATGGTTTTTCCGGTCAAGGTCTTTACGAAGATTTGCAT 6046
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 451874271737240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |