Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20rhopaloa_20[refseq_20GCF_5F000236305.1_202013-02-22] 22,819 sequences; 197,375,704 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq1813 187 3e-42 seq8502 179 5e-40 seq8501 163 3e-35 seq22136 129 7e-25 seq20124 113 6e-20 >seq1813 Length=4749 Score = 187 bits (206), Expect = 3e-42 Identities = 892/1399 (64%), Gaps = 28/1399 (2%) Strand=Plus/Plus Query 115894 CGTCTCAGATAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGG 115953 ||||| ||| ||||| || || || ||||| || | || ||||| |||| ||||| Sbjct 1533 CGTCTGGTATAAATGTTCGTGGTATAGGGCTCGAAAGATTCGTTGTTTCCCATAATTTGA 1592 Query 115954 GCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTA 116013 || || || || || ||||| || || | || ||| ||| |||| ||| | | Sbjct 1593 GCAGTAGACGCAGTAGGCATAGGGGCAACAAGCAGGGAGTTCCGGACACCGTGCTTTTTG 1652 Query 116014 ATGCGTTCCTTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTCCCACATATCA 116073 ||| ||||| || | ||| || | | | ||| || |||||||| || Sbjct 1653 ATGGACTCCTTTAGTTTTTGCCAATCCCACAGGTTCGTTGGCTGTTTGTCCCACATGTCG 1712 Query 116074 AACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACC 116133 |||| || || |||| | | | || ||||||| | |||||||| || || || ||| Sbjct 1713 TACTGCAGAATTCCTTTGCTCACGGGGCTTCCCTCATAGGTCTCATAGGGACCTTCGACC 1772 Query 116134 TCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCA 116193 | ||||| ||| |||| || || ||||| ||| || || || ||||| || | | Sbjct 1773 TGCGCCAGTTCACAGCTGGCTTCCAGGGCACCGTAGTAAATCGTTTCAAATATCTGCTGA 1832 Query 116194 TTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCG 116253 |||| |||||| || ||| | | || || | ||| || | || ||| Sbjct 1833 TTCAAAAGACCGGCCTCTTCACTTTCATATGGGAATCGCATGAGAATCAAGGCGTCAGCG 1892 Query 116254 AGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCC 116313 | ||| || ||||||| ||| | || |||||||||| ||| || || || ||| Sbjct 1893 AAACCCTGAACACCGATGCCCACGGGACGATGTCTCAAATTGGATTTCTTTGCC-TCTGG 1951 Query 116314 -ACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGAT 116372 | ||||||||| || |||| || | | | || ||||||||||| || ||| || | Sbjct 1952 GAGGGGATAAAAGTTGATATCAATTATCTTGTTGAGATTTTTGGTAACCGTCTTGGTAAC 2011 Query 116373 TTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGC 116432 ||| | ||| || | | ||||||| | |||| ||||| || | ||| || Sbjct 2012 TTCCTTAAGTTTCTGGAAATCAAATTTTT---TCTCGGGTGTGACAAACATGTTAAGAGC 2068 Query 116433 GATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGT 116492 ||| || ||||| || ||||| | |||||||| | || || | ||||| || Sbjct 2069 GATGGATGCCAGGTTGCACACTGCAATCTCATCCGGCGAGGAATATTCAACGATTTCTGT 2128 Query 116493 ACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGC 116552 ||||| || | |||||||||||| | ||||| || || || |||| || || Sbjct 2129 GCACAAGTTGCTGCACTTAATGGTGCCAACGTTCTGCTGGTTGCTTTTCCTGTTGCAGGC 2188 Query 116553 ATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCA 116612 ||||||| |||||||||| || | || || ||| || |||| | ||| || ||| Sbjct 2189 ATCCTTGAAGAGCATATACGGGTTGCCAGTTTCCACCTGCGACTCAATAATGGCAAACCA 2248 Query 116613 -TACATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGA 116671 | | | | || | || || ||| || || ||||| | |||||| || ||||| | Sbjct 2249 CAAGGACTGAGCCTTG-ACCGTTCGGTTCGCACGACCCTCTTGCTCGTATTTAGTGTACA 2307 Query 116672 GGGCCTCAAACTCTTCACCCACAG-CCTCTGAGAGCCCTGGTGCCTTATCTGGACAGAAG 116730 | ||| || || || ||| ||| | || || || || || | || || | Sbjct 2308 GCTTCTCGAATTCATCGCCC-CAGACATCGTGCAGGCCCGGGCATTTGTGCGGGCACATC 2366 Query 116731 AGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCC 116790 || ||||| | || |||| || || ||||||||||| || || ||||| || || Sbjct 2367 AGCGACCAATTCTCATTGGCCTCGACGCGTTTCATGAAGAGATCGGGTATCCAAAGGGCG 2426 Query 116791 GAGAAGAGATCCCGACAGCGA-GCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAA 116849 | || ||||| || |||| || || | | || || || | | |||| ||| Sbjct 2427 TAAAACAGATCGCGGGCGCGATTCTCCTCCTTGCCAGTGTTTTTCTTG-AGTTCCAGAAA 2485 Query 116850 GTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-AC-----CCCTTGCG 116903 || | || ||||| |||||| || |||||||| | || | | || | ||||| Sbjct 2486 CTCAAAGACATCCGAGTGCCAGGGCTCCAGGTAAATGGCAAAGGCACCGGGACGCTTGC- 2544 Query 116904 ACGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGAT 116963 || ||| |||| | ||||| | ||| ||| || || | ||||| |||| | Sbjct 2545 -CG-CCACCCTGATCCACATAGCGTGCCACATTGTTGAAGACCCTCAGCATGGGAACTAG 2602 Query 116964 ACCATCAGATTGGCCATTTGTCCCCCGAAT--ACGAGACTTGTTGGCTCTGACATCGTGG 117021 |||| || |||||| || || | ||| | | | || || || | || || Sbjct 2603 GCCATTGGAAGTGCCATTCGTGCCGCAAATAGAGGTGCCT--TTTGCCCGGATGCAATGA 2660 Query 117022 ATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCG 117081 | | || ||||| || |||||| | || ||||| ||||| | || || | Sbjct 2661 ACATTCAGTCCAATGCCACCTGCCGATTTCGAGATCATGGCGCAGT--GTTCCACCGATT 2718 Query 117082 T--AGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTG 117139 | |||| || |||||||||||| || | | | | ||||| ||| |||| || | Sbjct 2719 TAAAGATGCCCTCGATCGAGTCAGCCGTCATGGTCAAAAGGAAACAGGAAGACAGCTGCG 2778 Query 117140 GCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGGGACA 117199 | | ||| ||||| || || ||||| | |||||| |||| | | | |||| Sbjct 2779 GGCGATTTGTGGCAGCGGCAAAAAGCGTTGGCGATGCGTGGGTGAAGAATCGCTCAGACA 2838 Query 117200 TCTTATCGTAGGTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATTGAGACCC 117259 | |||||| |||| | | | ||| || || || || || || |||| || | Sbjct 2839 AAAGGTTGTAGGTTTCCACGGCCGCATCAATATCCTCTCCATGGATTCCTATTGCCACGC 2898 Query 117260 GCATAAACATGTATTGGGG 117278 |||| ||||||| ||| || Sbjct 2899 GCATCAACATGTGTTGCGG 2917 >seq8502 Length=4749 Score = 179 bits (198), Expect = 5e-40 Identities = 893/1401 (64%), Gaps = 31/1401 (2%) Strand=Plus/Plus Query 115894 CGTCTCAGATAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGG 115953 ||||| ||| ||||| || || || ||||| || | || ||||| |||| ||||| Sbjct 1533 CGTCTGGTATAAATGTTCGTGGTATAGGGCTCGAAAGATTCGTTGTTTCCCATAATTTGA 1592 Query 115954 GCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTA 116013 || || || || || ||||| || || | || ||| ||| |||| ||| | | Sbjct 1593 GCAGTAGACGCAGTAGGCATAGGGGCAACAAGCAGGGAGTTCCGGACACCGTGCTTTTTG 1652 Query 116014 ATGCGTTCCTTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTCCCACATATCA 116073 ||| ||||| || | ||| || | | | ||| || |||||||| || Sbjct 1653 ATGGACTCCTTTAGTTTTTGCCAATCCCACAGGTTCGTTGGCTGTTTGTCCCACATGTCG 1712 Query 116074 AACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACC 116133 |||| || || |||| | | | || ||||||| | |||||||| || || || ||| Sbjct 1713 TACTGCAGAATTCCTTTGCTCACGGGGCTTCCCTCATAGGTCTCATAGGGACCTTCGACC 1772 Query 116134 TCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCA 116193 | ||||| ||| |||| || || ||||| ||| || || || ||||| || | | Sbjct 1773 TGCGCCAGTTCACAGCTGGCTTCCAGGGCACCGTAGTAAATCGTTTCAAATATCTGCTGA 1832 Query 116194 TTCATT--GCCTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCG 116251 |||| | | ||| || || ||| | | || || | ||| || | || | Sbjct 1833 TTCAAAAAGACC-GGCTTCTTCACTTTCATATGGGAATCGCATGAGAATCAAGGCGTCAG 1891 Query 116252 CGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCT 116311 ||| ||| || ||||||| ||| | || |||||||||| ||| || || || ||| Sbjct 1892 CGAAACCCTGAACACCGATGCCCACGGGACGATGTCTCAAATTGGATTTCTTTGCC-TCT 1950 Query 116312 CC-ACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTG 116370 | ||||||||| || |||| || | | | || ||||||||||| || ||| || Sbjct 1951 GGGAGGGGATAAAAGTTGATATCAATTATCTTGTTGAGATTTTTGGTAACCGTCTTGGTA 2010 Query 116371 ATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGG 116430 | ||| | ||| || | | ||||||| | |||| ||||| || | ||| Sbjct 2011 ACTTCCTTAAGTTTCTGGAAATCAAATTTTT---TCTCGGGTGTGACAAACATGTTAAGA 2067 Query 116431 GCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCC 116490 ||||| || ||||| || ||||| | |||||||| | || || | ||||| Sbjct 2068 GCGATGGATGCCAGGTTGCACACTGCAATCTCATCCGGCGAGGAATATTCAACGATTTCT 2127 Query 116491 GTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACAC 116550 || ||||| || | |||||||||||| | ||||| || || || |||| || Sbjct 2128 GTGCACAAGTTGCTGCACTTAATGGTGCCAACGTTCTGCTGGTTGCTTTTCCTGTTGCAG 2187 Query 116551 GCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTC 116610 ||||||||| |||||||||| || | || || ||| || |||| | ||| || | Sbjct 2188 GCATCCTTGAAGAGCATATACGGGTTGCCAGTTTCCACCTGCGACTCAATAATGGCAAAC 2247 Query 116611 CA-TACATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTA 116669 || | | | | || | || || ||| || || ||||| | |||||| || ||||| Sbjct 2248 CACAAGGACTGAGCCTTG-ACCGTTCGGTTCGCACGACCCTCTTGCTCGTATTTAGTGTA 2306 Query 116670 GAGGGCCTCAAACTCTTCACCCACAG-CCTCTGAGAGCCCTGGTGCCTTATCTGGACAGA 116728 || ||| || || || ||| ||| | || || || || || | || || | Sbjct 2307 CAGCTTCTCGAATTCATCGCCC-CAGACATCGTGCAGGCCCGGGCATTTGTGCGGGCACA 2365 Query 116729 AGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCG 116788 || ||||| | || |||| || || ||||||||||| || || ||||| || | Sbjct 2366 TCAGCGACCAATTCTCATTGGCCTCGACGCGTTTCATGAAGAGATCGGGTATCCAAAGGG 2425 Query 116789 CCGAGAAGAGATCCCGACAGCGA-GCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAA 116847 | | || ||||| || |||| || || | | || || || | | |||| | Sbjct 2426 CGTAAAACAGATCGCGGGCGCGATTCTCCTCCTTGCCAGTGTTTTTCTTG-AGTTCCAGA 2484 Query 116848 AAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-AC-----CCCTTG 116901 || || | || ||||| |||||| || |||||||| | || | | || | |||| Sbjct 2485 AACTCAAAGACATCCGAGTGCCAGGGCTCCAGGTAAATGGCAAAGGCACCGGGACGCTTG 2544 Query 116902 CGACGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATG 116961 | || ||| |||| | ||||| | ||| ||| || || | ||||| |||| Sbjct 2545 C--CG-CCACCCTGATCCACATAGCGTGCCACATTGTTGAAGACCCTCAGCATGGGAACT 2601 Query 116962 ATACCATCAGATTGGCCATTTGTCCCCCGAAT--ACGAGACTTGTTGGCTCTGACATCGT 117019 | |||| || |||||| || || | ||| | | | || || || | || | Sbjct 2602 AGGCCATTGGAAGTGCCATTCGTGCCGCAAATAGAGGTGCCT--TTTGCCCGGATGCAAT 2659 Query 117020 GGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGC 117079 | | | || ||||| || |||||| | || ||||| ||||| | || || | Sbjct 2660 GAACATTCAGTCCAATGCCACCTGCCGATTTCGAGATCATGGCGCAGT--GTTCCACCGA 2717 Query 117080 CGT--AGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTG 117137 | |||| || |||||||||||| || | | | | ||||| ||| |||| || Sbjct 2718 TTTAAAGATGCCCTCGATCGAGTCAGCCGTCATGGTCAAAAGGAAACAGGAAGACAGCTG 2777 Query 117138 TGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGGGA 117197 || | ||| ||||| || || ||||| | |||||| |||| | | | || Sbjct 2778 CGGGCGATTTGTGGCAGCGGCAAAAAGCGTTGGCGATGCGTGGGTGAAGAATCGCTCAGA 2837 Query 117198 CATCTTATCGTAGGTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATTGAGAC 117257 || | |||||| |||| | | | ||| || || || || || || |||| || Sbjct 2838 CAAAAGGTTGTAGGTTTCCACGGCCGCATCAATATCCTCTCCATGGATTCCTATTGCCAC 2897 Query 117258 CCGCATAAACATGTATTGGGG 117278 ||||| ||||||| ||| || Sbjct 2898 GCGCATCAACATGTGTTGCGG 2918 >seq8501 Length=20033 Score = 163 bits (180), Expect = 3e-35 Identities = 891/1402 (64%), Gaps = 32/1402 (2%) Strand=Plus/Minus Query 115894 CGTCTCAGATAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGG 115953 ||||| ||| ||||| || || || ||||| || | || ||||| |||| ||||| Sbjct 2423 CGTCTGGTATAAATGTTCGTGGTATAGGGCTCGAAAGATTCGTTGTTTCCCATAATTTGA 2364 Query 115954 GCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTA 116013 || || || || || ||||| || || | || ||| ||| |||| ||| | | Sbjct 2363 GCAGTAGACGCAGTAGGCATAGGGGCAACAAGCAGGGAGTTCCGGACACCGTGCTTTTTG 2304 Query 116014 ATGCGTTCCTTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTCCCACATATCA 116073 ||| ||||| || | ||| || | | | ||| || |||||||| || Sbjct 2303 ATGGACTCCTTTAGTTTTTGCCAATCCCACAGGTTCGTTGGCTGTTTGTCCCACATGTCG 2244 Query 116074 AACTGG-AGGATACCTTGGGACGCTGGCGAT-CCCTCAAATGT-CTCATATGGGCCCTCA 116130 |||| || || |||| | | | || | |||||| | || |||||| || || || Sbjct 2243 TACTGCTAGAATTCCTTTGCTCACGGGGCTTACCCTCATAGGTACTCATAGGGACCTTCG 2184 Query 116131 ACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGA 116190 |||| ||||| ||| |||| || || ||||| ||| || || || ||||| || | Sbjct 2183 ACCTGCGCCAGTTCACAGCTGGCTTCCAGGGCACCGTAGTAAATCGTTTCAAATATCTGC 2124 Query 116191 GCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCC 116250 ||||| ||| || || ||| | | || || | ||| || | || Sbjct 2123 TGATTCAAAAGACCGGCTTCTTCACTTTCATATGGGAATCGCATGAGAATCAAGGCGTCA 2064 Query 116251 GCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTC 116310 |||| ||| || ||||||| ||| | || |||||||||| ||| || || || || Sbjct 2063 GCGAAACCCTGAACACCGATGCCCACGGGACGATGTCTCAAATTGGATTTCTTTGCC-TC 2005 Query 116311 TCC-ACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGT 116369 | | ||||||||| || |||| || | | | || ||||||||||| || ||| || Sbjct 2004 TGGGAGGGGATAAAAGTTGATATCAATTATCTTGTTGAGATTTTTGGTAACCGTCTTGGT 1945 Query 116370 GATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAG 116429 | ||| | ||| || | | ||||||| | |||| ||||| || | ||| Sbjct 1944 AACTTCCTTAAGTTTCTGGAAATCAAATTTTT---TCTCGGGTGTGACAAACATGTTAAG 1888 Query 116430 GGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTC 116489 ||||| || ||||| || ||||| | |||||||| | || || | ||||| Sbjct 1887 AGCGATGGATGCCAGGTTGCACACTGCAATCTCATCCGGCGAGGAATATTCAACGATTTC 1828 Query 116490 CGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACA 116549 || ||||| || | |||||||||||| | ||||| || || || |||| || Sbjct 1827 TGTGCACAAGTTGCTGCACTTAATGGTGCCAACGTTCTGCTGGTTGCTTTTCCTGTTGCA 1768 Query 116550 CGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTT 116609 ||||||||| |||||||||| || | || || ||| || |||| | ||| || Sbjct 1767 GGCATCCTTGAAGAGCATATACGGGTTGCCAGTTTCCACCTGCGACTCAATAATGGCAAA 1708 Query 116610 CCA-TACATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGT 116668 ||| | | | | || | || || ||| || || ||||| | |||||| || |||| Sbjct 1707 CCACAAGGACTGAGCCTTG-ACCGTTCGGTTCGCACGACCCTCTTGCTCGTATTTAGTGT 1649 Query 116669 AGAGGGCCTCAAACTCTTCACCCACAG-CCTCTGAGAGCCCTGGTGCCTTATCTGGACAG 116727 | || ||| || || || ||| ||| | || || || || || | || || Sbjct 1648 ACAGCTTCTCGAATTCATCGCCC-CAGACATCGTGCAGGCCCGGGCATTTGTGCGGGCAC 1590 Query 116728 AAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGC 116787 | || ||||| | || |||| || || ||||||||||| || || ||||| || Sbjct 1589 ATCAGCGACCAATTCTCATTGGCCTCGACGCGTTTCATGAAGAGATCGGGTATCCAAAGG 1530 Query 116788 GCCGAGAAGAGATCCCGACAGCGA-GCTTCTTCATCCCCCTGATTGAGACGCAACTCCAA 116846 || | || ||||| || |||| || || | | || || || | | |||| Sbjct 1529 GCGTAAAACAGATCGCGGGCGCGATTCTCCTCCTTGCCAGTGTTT--TTCTGAGTTCCAG 1472 Query 116847 AAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-AC-----CCCTT 116900 ||| || | || ||||| |||||| || |||||||| | || | | || | ||| Sbjct 1471 AAACTCAAAGACATCCGAGTGCCAGGGCTCCAGGTAAATGGCAAAGGCACCGGGACGCTT 1412 Query 116901 GCGACGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAAT 116960 || || ||| |||| | ||||| | ||| ||| || || | ||||| |||| Sbjct 1411 GC--CG-CCACCCTGATCCACATAGCGTGCCACATTGTTGAAGACCCTCAGCATGGGAAC 1355 Query 116961 GATACCATCAGATTGGCCATTTGTCCCCCGAAT--ACGAGACTTGTTGGCTCTGACATCG 117018 | |||| || |||||| || || | ||| | | | || || || | || Sbjct 1354 TAGGCCATTGGAAGTGCCATTCGTGCCGCAAATAGAGGTGCCT--TTTGCCCGGATGCAA 1297 Query 117019 TGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTG 117078 || | | || ||||| || |||||| | || ||||| ||||| | || || | Sbjct 1296 TGAACATTCAGTCCAATGCCACCTGCCGATTTCGAGATCATGGCGCAGT--GTTCCACCG 1239 Query 117079 CCGT--AGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTT 117136 | |||| || |||||||||||| || | | | | ||||| ||| |||| | Sbjct 1238 ATTTAAAGATGCCCTCGATCGAGTCAGCCGTCATGGTCAAAAGGAAACAGGAAGACAGCT 1179 Query 117137 GTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGGG 117196 | || | ||| ||||| || || ||||| | |||||| |||| | | | | Sbjct 1178 GCGGGCGATTTGTGGCAGCGGCAAAAAGCGTTGGCGATGCGTGGGTGAAGAATCGCTCAG 1119 Query 117197 ACATCTTATCGTAGGTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATTGAGA 117256 ||| | |||||| |||| | | | ||| || || || || || || |||| | Sbjct 1118 ACAAAAGGTTGTAGGTTTCCACGGCCGCATCAATATCCTCTCCATGGATTCCTATTGCCA 1059 Query 117257 CCCGCATAAACATGTATTGGGG 117278 | ||||| ||||||| ||| || Sbjct 1058 CGCGCATCAACATGTGTTGCGG 1037 >seq22136 Length=515022 Score = 129 bits (142), Expect = 7e-25 Identities = 281/418 (67%), Gaps = 2/418 (0%) Strand=Plus/Plus Query 127231 GTAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATTCTCCAT 127290 ||| || || ||| ||||||||||||||| ||||| || || ||| ||| ||||||| Sbjct 289636 GTACTCGCCCACCTTCTTCTCGAAGAAGTTGGTCTTGCCGTCCAGGGAGATCATCTCCAT 289695 Query 127291 AAAATCAAATGGGTTCTTTGAGTTCCAAATTGTTGGCAC-CCCAATCTGTTTGAGGAGAC 127349 || | || |||||||| | ||| | || || || |||||| | || | || Sbjct 289696 GAAGTTGAACGGGTTCTTGGTGTTGTAGATCTTTCCAACGCCCAAT-TCCACCAGCAAAC 289754 Query 127350 GATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTAC 127409 | |||| ||| |||||||||||| ||||| || ||||||| || || ||||| Sbjct 289755 GGTCCGCCACGAACTCAATGTACTGCGACATGAGGTCGCAGTTCATGCCAATAAGGTTTA 289814 Query 127410 ATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTACGATGGCGT 127469 || || || || || |||| ||| ||||||| |||| || || || | ||| || Sbjct 289815 CGGGCAGGGCATCGGTGAGGAACTCCTGCTCAATGGCCACCGCATCACGGATGATCTCGA 289874 Query 127470 GAATAGTGTCCACCCCAGGTCTATTGCGTAAAGTCTTGAAGAGTTCCACAGCAAACTCTT 127529 || || || |||| | | | || ||| | ||| || || || Sbjct 289875 TGATGCGCTCGCGCCTGGGTCGCTGAACCAGATGCTGGAACATCAGCACGGCGAAGTCAC 289934 Query 127530 GGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGAC 127589 ||| | |||||||| |||||||| ||||| || |||||| ||| || ||||| | || Sbjct 289935 AGTGCAATCCCTCGTCCCGGGAGATCAGTTCGTTGGAGAAGGTCAGGCCCGGCATCAAAC 289994 Query 127590 CCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCAC 127647 | || ||||| | ||||||||| | || ||| ||||||||| |||||||| Sbjct 289995 CGCGTTTCTTTAGCCAGAAAATGGAGGCGAAACTGCCGCTGAAGAAGATGCCCTCCAC 290052 >seq20124 Length=133112 Score = 113 bits (124), Expect = 6e-20 Identities = 171/241 (71%), Gaps = 2/241 (1%) Strand=Plus/Plus Query 175927 ATCTTTGCCACCCATGAGACGCGTCCCAAATTGACCACATGGCTCAAGGAGATTGATATT 175986 ||||||||||||| | | ||| || || || ||||| | ||| || || |||||||| || Sbjct 43836 ATCTTTGCCACCCGTCAAACGAGTACCGAACTGACCGCGTGGTTCCAGCAGATTGATGTT 43895 Query 175987 GTTTGAGCCCATATAGTCATTCGCCAACTTGACAATCGT-ATCCGCGAGGGAGACTTCAC 176045 ||||| ||||| | ||| | || | || ||||| || ||| || | ||||| || | Sbjct 43896 GTTTGCGCCCACAAAGTTCTGGGCGAGATTCACAATGGTCATCTGC-AACGAGACCTCGC 43954 Query 176046 CGTGATGGTAGGCCGACTTGTCCGCCACATACGCCGCCAACTGCGCCACCTTCATCTCAT 176105 |||| |||||||| ||| | || ||||| | | | | ||| || ||||||| ||| Sbjct 43955 CGTGGTGGTAGGCGGACATCTCGGCCACCGATCCGGATAGCTGGGCGACCTTCACCTCGC 44014 Query 176106 CCTTGAGGTTCTTGTGGAAGCACGCATACATGACCTTTCTCTGTGAAGGCTTGAGGCCGT 176165 |||| |||| | | |||||| | |||| ||||| | ||| ||||| || || | Sbjct 44015 GCTTGTCGTTCCTCTTGAAGCAGGTGAACATTACCTTGCGCTGACCCGGCTTAAGTCCAT 44074 Query 176166 C 176166 | Sbjct 44075 C 44075 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613332204740040