Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20rhopaloa_20[refseq_20GCF_5F000236305.1_202013-02-22]
22,819 sequences; 197,375,704 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq1813 187 3e-42
seq8502 179 5e-40
seq8501 163 3e-35
seq22136 129 7e-25
seq20124 113 6e-20
>seq1813
Length=4749
Score = 187 bits (206), Expect = 3e-42
Identities = 892/1399 (64%), Gaps = 28/1399 (2%)
Strand=Plus/Plus
Query 115894 CGTCTCAGATAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGG 115953
||||| ||| ||||| || || || ||||| || | || ||||| |||| |||||
Sbjct 1533 CGTCTGGTATAAATGTTCGTGGTATAGGGCTCGAAAGATTCGTTGTTTCCCATAATTTGA 1592
Query 115954 GCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTA 116013
|| || || || || ||||| || || | || ||| ||| |||| ||| | |
Sbjct 1593 GCAGTAGACGCAGTAGGCATAGGGGCAACAAGCAGGGAGTTCCGGACACCGTGCTTTTTG 1652
Query 116014 ATGCGTTCCTTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTCCCACATATCA 116073
||| ||||| || | ||| || | | | ||| || |||||||| ||
Sbjct 1653 ATGGACTCCTTTAGTTTTTGCCAATCCCACAGGTTCGTTGGCTGTTTGTCCCACATGTCG 1712
Query 116074 AACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACC 116133
|||| || || |||| | | | || ||||||| | |||||||| || || || |||
Sbjct 1713 TACTGCAGAATTCCTTTGCTCACGGGGCTTCCCTCATAGGTCTCATAGGGACCTTCGACC 1772
Query 116134 TCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCA 116193
| ||||| ||| |||| || || ||||| ||| || || || ||||| || | |
Sbjct 1773 TGCGCCAGTTCACAGCTGGCTTCCAGGGCACCGTAGTAAATCGTTTCAAATATCTGCTGA 1832
Query 116194 TTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCG 116253
|||| |||||| || ||| | | || || | ||| || | || |||
Sbjct 1833 TTCAAAAGACCGGCCTCTTCACTTTCATATGGGAATCGCATGAGAATCAAGGCGTCAGCG 1892
Query 116254 AGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCC 116313
| ||| || ||||||| ||| | || |||||||||| ||| || || || |||
Sbjct 1893 AAACCCTGAACACCGATGCCCACGGGACGATGTCTCAAATTGGATTTCTTTGCC-TCTGG 1951
Query 116314 -ACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGAT 116372
| ||||||||| || |||| || | | | || ||||||||||| || ||| || |
Sbjct 1952 GAGGGGATAAAAGTTGATATCAATTATCTTGTTGAGATTTTTGGTAACCGTCTTGGTAAC 2011
Query 116373 TTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGC 116432
||| | ||| || | | ||||||| | |||| ||||| || | ||| ||
Sbjct 2012 TTCCTTAAGTTTCTGGAAATCAAATTTTT---TCTCGGGTGTGACAAACATGTTAAGAGC 2068
Query 116433 GATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGT 116492
||| || ||||| || ||||| | |||||||| | || || | ||||| ||
Sbjct 2069 GATGGATGCCAGGTTGCACACTGCAATCTCATCCGGCGAGGAATATTCAACGATTTCTGT 2128
Query 116493 ACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGC 116552
||||| || | |||||||||||| | ||||| || || || |||| || ||
Sbjct 2129 GCACAAGTTGCTGCACTTAATGGTGCCAACGTTCTGCTGGTTGCTTTTCCTGTTGCAGGC 2188
Query 116553 ATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCA 116612
||||||| |||||||||| || | || || ||| || |||| | ||| || |||
Sbjct 2189 ATCCTTGAAGAGCATATACGGGTTGCCAGTTTCCACCTGCGACTCAATAATGGCAAACCA 2248
Query 116613 -TACATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGA 116671
| | | | || | || || ||| || || ||||| | |||||| || ||||| |
Sbjct 2249 CAAGGACTGAGCCTTG-ACCGTTCGGTTCGCACGACCCTCTTGCTCGTATTTAGTGTACA 2307
Query 116672 GGGCCTCAAACTCTTCACCCACAG-CCTCTGAGAGCCCTGGTGCCTTATCTGGACAGAAG 116730
| ||| || || || ||| ||| | || || || || || | || || |
Sbjct 2308 GCTTCTCGAATTCATCGCCC-CAGACATCGTGCAGGCCCGGGCATTTGTGCGGGCACATC 2366
Query 116731 AGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCC 116790
|| ||||| | || |||| || || ||||||||||| || || ||||| || ||
Sbjct 2367 AGCGACCAATTCTCATTGGCCTCGACGCGTTTCATGAAGAGATCGGGTATCCAAAGGGCG 2426
Query 116791 GAGAAGAGATCCCGACAGCGA-GCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAA 116849
| || ||||| || |||| || || | | || || || | | |||| |||
Sbjct 2427 TAAAACAGATCGCGGGCGCGATTCTCCTCCTTGCCAGTGTTTTTCTTG-AGTTCCAGAAA 2485
Query 116850 GTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-AC-----CCCTTGCG 116903
|| | || ||||| |||||| || |||||||| | || | | || | |||||
Sbjct 2486 CTCAAAGACATCCGAGTGCCAGGGCTCCAGGTAAATGGCAAAGGCACCGGGACGCTTGC- 2544
Query 116904 ACGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGAT 116963
|| ||| |||| | ||||| | ||| ||| || || | ||||| |||| |
Sbjct 2545 -CG-CCACCCTGATCCACATAGCGTGCCACATTGTTGAAGACCCTCAGCATGGGAACTAG 2602
Query 116964 ACCATCAGATTGGCCATTTGTCCCCCGAAT--ACGAGACTTGTTGGCTCTGACATCGTGG 117021
|||| || |||||| || || | ||| | | | || || || | || ||
Sbjct 2603 GCCATTGGAAGTGCCATTCGTGCCGCAAATAGAGGTGCCT--TTTGCCCGGATGCAATGA 2660
Query 117022 ATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCG 117081
| | || ||||| || |||||| | || ||||| ||||| | || || |
Sbjct 2661 ACATTCAGTCCAATGCCACCTGCCGATTTCGAGATCATGGCGCAGT--GTTCCACCGATT 2718
Query 117082 T--AGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTG 117139
| |||| || |||||||||||| || | | | | ||||| ||| |||| || |
Sbjct 2719 TAAAGATGCCCTCGATCGAGTCAGCCGTCATGGTCAAAAGGAAACAGGAAGACAGCTGCG 2778
Query 117140 GCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGGGACA 117199
| | ||| ||||| || || ||||| | |||||| |||| | | | ||||
Sbjct 2779 GGCGATTTGTGGCAGCGGCAAAAAGCGTTGGCGATGCGTGGGTGAAGAATCGCTCAGACA 2838
Query 117200 TCTTATCGTAGGTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATTGAGACCC 117259
| |||||| |||| | | | ||| || || || || || || |||| || |
Sbjct 2839 AAAGGTTGTAGGTTTCCACGGCCGCATCAATATCCTCTCCATGGATTCCTATTGCCACGC 2898
Query 117260 GCATAAACATGTATTGGGG 117278
|||| ||||||| ||| ||
Sbjct 2899 GCATCAACATGTGTTGCGG 2917
>seq8502
Length=4749
Score = 179 bits (198), Expect = 5e-40
Identities = 893/1401 (64%), Gaps = 31/1401 (2%)
Strand=Plus/Plus
Query 115894 CGTCTCAGATAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGG 115953
||||| ||| ||||| || || || ||||| || | || ||||| |||| |||||
Sbjct 1533 CGTCTGGTATAAATGTTCGTGGTATAGGGCTCGAAAGATTCGTTGTTTCCCATAATTTGA 1592
Query 115954 GCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTA 116013
|| || || || || ||||| || || | || ||| ||| |||| ||| | |
Sbjct 1593 GCAGTAGACGCAGTAGGCATAGGGGCAACAAGCAGGGAGTTCCGGACACCGTGCTTTTTG 1652
Query 116014 ATGCGTTCCTTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTCCCACATATCA 116073
||| ||||| || | ||| || | | | ||| || |||||||| ||
Sbjct 1653 ATGGACTCCTTTAGTTTTTGCCAATCCCACAGGTTCGTTGGCTGTTTGTCCCACATGTCG 1712
Query 116074 AACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACC 116133
|||| || || |||| | | | || ||||||| | |||||||| || || || |||
Sbjct 1713 TACTGCAGAATTCCTTTGCTCACGGGGCTTCCCTCATAGGTCTCATAGGGACCTTCGACC 1772
Query 116134 TCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCA 116193
| ||||| ||| |||| || || ||||| ||| || || || ||||| || | |
Sbjct 1773 TGCGCCAGTTCACAGCTGGCTTCCAGGGCACCGTAGTAAATCGTTTCAAATATCTGCTGA 1832
Query 116194 TTCATT--GCCTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCG 116251
|||| | | ||| || || ||| | | || || | ||| || | || |
Sbjct 1833 TTCAAAAAGACC-GGCTTCTTCACTTTCATATGGGAATCGCATGAGAATCAAGGCGTCAG 1891
Query 116252 CGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCT 116311
||| ||| || ||||||| ||| | || |||||||||| ||| || || || |||
Sbjct 1892 CGAAACCCTGAACACCGATGCCCACGGGACGATGTCTCAAATTGGATTTCTTTGCC-TCT 1950
Query 116312 CC-ACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTG 116370
| ||||||||| || |||| || | | | || ||||||||||| || ||| ||
Sbjct 1951 GGGAGGGGATAAAAGTTGATATCAATTATCTTGTTGAGATTTTTGGTAACCGTCTTGGTA 2010
Query 116371 ATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGG 116430
| ||| | ||| || | | ||||||| | |||| ||||| || | |||
Sbjct 2011 ACTTCCTTAAGTTTCTGGAAATCAAATTTTT---TCTCGGGTGTGACAAACATGTTAAGA 2067
Query 116431 GCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCC 116490
||||| || ||||| || ||||| | |||||||| | || || | |||||
Sbjct 2068 GCGATGGATGCCAGGTTGCACACTGCAATCTCATCCGGCGAGGAATATTCAACGATTTCT 2127
Query 116491 GTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACAC 116550
|| ||||| || | |||||||||||| | ||||| || || || |||| ||
Sbjct 2128 GTGCACAAGTTGCTGCACTTAATGGTGCCAACGTTCTGCTGGTTGCTTTTCCTGTTGCAG 2187
Query 116551 GCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTC 116610
||||||||| |||||||||| || | || || ||| || |||| | ||| || |
Sbjct 2188 GCATCCTTGAAGAGCATATACGGGTTGCCAGTTTCCACCTGCGACTCAATAATGGCAAAC 2247
Query 116611 CA-TACATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTA 116669
|| | | | | || | || || ||| || || ||||| | |||||| || |||||
Sbjct 2248 CACAAGGACTGAGCCTTG-ACCGTTCGGTTCGCACGACCCTCTTGCTCGTATTTAGTGTA 2306
Query 116670 GAGGGCCTCAAACTCTTCACCCACAG-CCTCTGAGAGCCCTGGTGCCTTATCTGGACAGA 116728
|| ||| || || || ||| ||| | || || || || || | || || |
Sbjct 2307 CAGCTTCTCGAATTCATCGCCC-CAGACATCGTGCAGGCCCGGGCATTTGTGCGGGCACA 2365
Query 116729 AGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCG 116788
|| ||||| | || |||| || || ||||||||||| || || ||||| || |
Sbjct 2366 TCAGCGACCAATTCTCATTGGCCTCGACGCGTTTCATGAAGAGATCGGGTATCCAAAGGG 2425
Query 116789 CCGAGAAGAGATCCCGACAGCGA-GCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAA 116847
| | || ||||| || |||| || || | | || || || | | |||| |
Sbjct 2426 CGTAAAACAGATCGCGGGCGCGATTCTCCTCCTTGCCAGTGTTTTTCTTG-AGTTCCAGA 2484
Query 116848 AAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-AC-----CCCTTG 116901
|| || | || ||||| |||||| || |||||||| | || | | || | ||||
Sbjct 2485 AACTCAAAGACATCCGAGTGCCAGGGCTCCAGGTAAATGGCAAAGGCACCGGGACGCTTG 2544
Query 116902 CGACGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATG 116961
| || ||| |||| | ||||| | ||| ||| || || | ||||| ||||
Sbjct 2545 C--CG-CCACCCTGATCCACATAGCGTGCCACATTGTTGAAGACCCTCAGCATGGGAACT 2601
Query 116962 ATACCATCAGATTGGCCATTTGTCCCCCGAAT--ACGAGACTTGTTGGCTCTGACATCGT 117019
| |||| || |||||| || || | ||| | | | || || || | || |
Sbjct 2602 AGGCCATTGGAAGTGCCATTCGTGCCGCAAATAGAGGTGCCT--TTTGCCCGGATGCAAT 2659
Query 117020 GGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGC 117079
| | | || ||||| || |||||| | || ||||| ||||| | || || |
Sbjct 2660 GAACATTCAGTCCAATGCCACCTGCCGATTTCGAGATCATGGCGCAGT--GTTCCACCGA 2717
Query 117080 CGT--AGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTG 117137
| |||| || |||||||||||| || | | | | ||||| ||| |||| ||
Sbjct 2718 TTTAAAGATGCCCTCGATCGAGTCAGCCGTCATGGTCAAAAGGAAACAGGAAGACAGCTG 2777
Query 117138 TGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGGGA 117197
|| | ||| ||||| || || ||||| | |||||| |||| | | | ||
Sbjct 2778 CGGGCGATTTGTGGCAGCGGCAAAAAGCGTTGGCGATGCGTGGGTGAAGAATCGCTCAGA 2837
Query 117198 CATCTTATCGTAGGTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATTGAGAC 117257
|| | |||||| |||| | | | ||| || || || || || || |||| ||
Sbjct 2838 CAAAAGGTTGTAGGTTTCCACGGCCGCATCAATATCCTCTCCATGGATTCCTATTGCCAC 2897
Query 117258 CCGCATAAACATGTATTGGGG 117278
||||| ||||||| ||| ||
Sbjct 2898 GCGCATCAACATGTGTTGCGG 2918
>seq8501
Length=20033
Score = 163 bits (180), Expect = 3e-35
Identities = 891/1402 (64%), Gaps = 32/1402 (2%)
Strand=Plus/Minus
Query 115894 CGTCTCAGATAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGG 115953
||||| ||| ||||| || || || ||||| || | || ||||| |||| |||||
Sbjct 2423 CGTCTGGTATAAATGTTCGTGGTATAGGGCTCGAAAGATTCGTTGTTTCCCATAATTTGA 2364
Query 115954 GCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTA 116013
|| || || || || ||||| || || | || ||| ||| |||| ||| | |
Sbjct 2363 GCAGTAGACGCAGTAGGCATAGGGGCAACAAGCAGGGAGTTCCGGACACCGTGCTTTTTG 2304
Query 116014 ATGCGTTCCTTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTCCCACATATCA 116073
||| ||||| || | ||| || | | | ||| || |||||||| ||
Sbjct 2303 ATGGACTCCTTTAGTTTTTGCCAATCCCACAGGTTCGTTGGCTGTTTGTCCCACATGTCG 2244
Query 116074 AACTGG-AGGATACCTTGGGACGCTGGCGAT-CCCTCAAATGT-CTCATATGGGCCCTCA 116130
|||| || || |||| | | | || | |||||| | || |||||| || || ||
Sbjct 2243 TACTGCTAGAATTCCTTTGCTCACGGGGCTTACCCTCATAGGTACTCATAGGGACCTTCG 2184
Query 116131 ACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGA 116190
|||| ||||| ||| |||| || || ||||| ||| || || || ||||| || |
Sbjct 2183 ACCTGCGCCAGTTCACAGCTGGCTTCCAGGGCACCGTAGTAAATCGTTTCAAATATCTGC 2124
Query 116191 GCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCC 116250
||||| ||| || || ||| | | || || | ||| || | ||
Sbjct 2123 TGATTCAAAAGACCGGCTTCTTCACTTTCATATGGGAATCGCATGAGAATCAAGGCGTCA 2064
Query 116251 GCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTC 116310
|||| ||| || ||||||| ||| | || |||||||||| ||| || || || ||
Sbjct 2063 GCGAAACCCTGAACACCGATGCCCACGGGACGATGTCTCAAATTGGATTTCTTTGCC-TC 2005
Query 116311 TCC-ACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGT 116369
| | ||||||||| || |||| || | | | || ||||||||||| || ||| ||
Sbjct 2004 TGGGAGGGGATAAAAGTTGATATCAATTATCTTGTTGAGATTTTTGGTAACCGTCTTGGT 1945
Query 116370 GATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAG 116429
| ||| | ||| || | | ||||||| | |||| ||||| || | |||
Sbjct 1944 AACTTCCTTAAGTTTCTGGAAATCAAATTTTT---TCTCGGGTGTGACAAACATGTTAAG 1888
Query 116430 GGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTC 116489
||||| || ||||| || ||||| | |||||||| | || || | |||||
Sbjct 1887 AGCGATGGATGCCAGGTTGCACACTGCAATCTCATCCGGCGAGGAATATTCAACGATTTC 1828
Query 116490 CGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACA 116549
|| ||||| || | |||||||||||| | ||||| || || || |||| ||
Sbjct 1827 TGTGCACAAGTTGCTGCACTTAATGGTGCCAACGTTCTGCTGGTTGCTTTTCCTGTTGCA 1768
Query 116550 CGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTT 116609
||||||||| |||||||||| || | || || ||| || |||| | ||| ||
Sbjct 1767 GGCATCCTTGAAGAGCATATACGGGTTGCCAGTTTCCACCTGCGACTCAATAATGGCAAA 1708
Query 116610 CCA-TACATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGT 116668
||| | | | | || | || || ||| || || ||||| | |||||| || ||||
Sbjct 1707 CCACAAGGACTGAGCCTTG-ACCGTTCGGTTCGCACGACCCTCTTGCTCGTATTTAGTGT 1649
Query 116669 AGAGGGCCTCAAACTCTTCACCCACAG-CCTCTGAGAGCCCTGGTGCCTTATCTGGACAG 116727
| || ||| || || || ||| ||| | || || || || || | || ||
Sbjct 1648 ACAGCTTCTCGAATTCATCGCCC-CAGACATCGTGCAGGCCCGGGCATTTGTGCGGGCAC 1590
Query 116728 AAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGC 116787
| || ||||| | || |||| || || ||||||||||| || || ||||| ||
Sbjct 1589 ATCAGCGACCAATTCTCATTGGCCTCGACGCGTTTCATGAAGAGATCGGGTATCCAAAGG 1530
Query 116788 GCCGAGAAGAGATCCCGACAGCGA-GCTTCTTCATCCCCCTGATTGAGACGCAACTCCAA 116846
|| | || ||||| || |||| || || | | || || || | | ||||
Sbjct 1529 GCGTAAAACAGATCGCGGGCGCGATTCTCCTCCTTGCCAGTGTTT--TTCTGAGTTCCAG 1472
Query 116847 AAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-AC-----CCCTT 116900
||| || | || ||||| |||||| || |||||||| | || | | || | |||
Sbjct 1471 AAACTCAAAGACATCCGAGTGCCAGGGCTCCAGGTAAATGGCAAAGGCACCGGGACGCTT 1412
Query 116901 GCGACGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAAT 116960
|| || ||| |||| | ||||| | ||| ||| || || | ||||| ||||
Sbjct 1411 GC--CG-CCACCCTGATCCACATAGCGTGCCACATTGTTGAAGACCCTCAGCATGGGAAC 1355
Query 116961 GATACCATCAGATTGGCCATTTGTCCCCCGAAT--ACGAGACTTGTTGGCTCTGACATCG 117018
| |||| || |||||| || || | ||| | | | || || || | ||
Sbjct 1354 TAGGCCATTGGAAGTGCCATTCGTGCCGCAAATAGAGGTGCCT--TTTGCCCGGATGCAA 1297
Query 117019 TGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTG 117078
|| | | || ||||| || |||||| | || ||||| ||||| | || || |
Sbjct 1296 TGAACATTCAGTCCAATGCCACCTGCCGATTTCGAGATCATGGCGCAGT--GTTCCACCG 1239
Query 117079 CCGT--AGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTT 117136
| |||| || |||||||||||| || | | | | ||||| ||| |||| |
Sbjct 1238 ATTTAAAGATGCCCTCGATCGAGTCAGCCGTCATGGTCAAAAGGAAACAGGAAGACAGCT 1179
Query 117137 GTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGGG 117196
| || | ||| ||||| || || ||||| | |||||| |||| | | | |
Sbjct 1178 GCGGGCGATTTGTGGCAGCGGCAAAAAGCGTTGGCGATGCGTGGGTGAAGAATCGCTCAG 1119
Query 117197 ACATCTTATCGTAGGTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATTGAGA 117256
||| | |||||| |||| | | | ||| || || || || || || |||| |
Sbjct 1118 ACAAAAGGTTGTAGGTTTCCACGGCCGCATCAATATCCTCTCCATGGATTCCTATTGCCA 1059
Query 117257 CCCGCATAAACATGTATTGGGG 117278
| ||||| ||||||| ||| ||
Sbjct 1058 CGCGCATCAACATGTGTTGCGG 1037
>seq22136
Length=515022
Score = 129 bits (142), Expect = 7e-25
Identities = 281/418 (67%), Gaps = 2/418 (0%)
Strand=Plus/Plus
Query 127231 GTAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATTCTCCAT 127290
||| || || ||| ||||||||||||||| ||||| || || ||| ||| |||||||
Sbjct 289636 GTACTCGCCCACCTTCTTCTCGAAGAAGTTGGTCTTGCCGTCCAGGGAGATCATCTCCAT 289695
Query 127291 AAAATCAAATGGGTTCTTTGAGTTCCAAATTGTTGGCAC-CCCAATCTGTTTGAGGAGAC 127349
|| | || |||||||| | ||| | || || || |||||| | || | ||
Sbjct 289696 GAAGTTGAACGGGTTCTTGGTGTTGTAGATCTTTCCAACGCCCAAT-TCCACCAGCAAAC 289754
Query 127350 GATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTAC 127409
| |||| ||| |||||||||||| ||||| || ||||||| || || |||||
Sbjct 289755 GGTCCGCCACGAACTCAATGTACTGCGACATGAGGTCGCAGTTCATGCCAATAAGGTTTA 289814
Query 127410 ATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTACGATGGCGT 127469
|| || || || || |||| ||| ||||||| |||| || || || | ||| ||
Sbjct 289815 CGGGCAGGGCATCGGTGAGGAACTCCTGCTCAATGGCCACCGCATCACGGATGATCTCGA 289874
Query 127470 GAATAGTGTCCACCCCAGGTCTATTGCGTAAAGTCTTGAAGAGTTCCACAGCAAACTCTT 127529
|| || || |||| | | | || ||| | ||| || || ||
Sbjct 289875 TGATGCGCTCGCGCCTGGGTCGCTGAACCAGATGCTGGAACATCAGCACGGCGAAGTCAC 289934
Query 127530 GGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGAC 127589
||| | |||||||| |||||||| ||||| || |||||| ||| || ||||| | ||
Sbjct 289935 AGTGCAATCCCTCGTCCCGGGAGATCAGTTCGTTGGAGAAGGTCAGGCCCGGCATCAAAC 289994
Query 127590 CCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCAC 127647
| || ||||| | ||||||||| | || ||| ||||||||| ||||||||
Sbjct 289995 CGCGTTTCTTTAGCCAGAAAATGGAGGCGAAACTGCCGCTGAAGAAGATGCCCTCCAC 290052
>seq20124
Length=133112
Score = 113 bits (124), Expect = 6e-20
Identities = 171/241 (71%), Gaps = 2/241 (1%)
Strand=Plus/Plus
Query 175927 ATCTTTGCCACCCATGAGACGCGTCCCAAATTGACCACATGGCTCAAGGAGATTGATATT 175986
||||||||||||| | | ||| || || || ||||| | ||| || || |||||||| ||
Sbjct 43836 ATCTTTGCCACCCGTCAAACGAGTACCGAACTGACCGCGTGGTTCCAGCAGATTGATGTT 43895
Query 175987 GTTTGAGCCCATATAGTCATTCGCCAACTTGACAATCGT-ATCCGCGAGGGAGACTTCAC 176045
||||| ||||| | ||| | || | || ||||| || ||| || | ||||| || |
Sbjct 43896 GTTTGCGCCCACAAAGTTCTGGGCGAGATTCACAATGGTCATCTGC-AACGAGACCTCGC 43954
Query 176046 CGTGATGGTAGGCCGACTTGTCCGCCACATACGCCGCCAACTGCGCCACCTTCATCTCAT 176105
|||| |||||||| ||| | || ||||| | | | | ||| || ||||||| |||
Sbjct 43955 CGTGGTGGTAGGCGGACATCTCGGCCACCGATCCGGATAGCTGGGCGACCTTCACCTCGC 44014
Query 176106 CCTTGAGGTTCTTGTGGAAGCACGCATACATGACCTTTCTCTGTGAAGGCTTGAGGCCGT 176165
|||| |||| | | |||||| | |||| ||||| | ||| ||||| || || |
Sbjct 44015 GCTTGTCGTTCCTCTTGAAGCAGGTGAACATTACCTTGCGCTGACCCGGCTTAAGTCCAT 44074
Query 176166 C 176166
|
Sbjct 44075 C 44075
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613332204740040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |