Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20rhopaloa_20[refseq_20GCF_5F000236305.1_202013-02-22]
22,819 sequences; 197,375,704 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq20124 95.1 2e-14
>seq20124
Length=133112
Score = 95.1 bits (104), Expect = 2e-14
Identities = 170/246 (69%), Gaps = 2/246 (1%)
Strand=Plus/Plus
Query 176020 ATCCTTACCACCCATGAGACGCGTACCAAACTGACCACACGGCTCAAGAAGATTGATATT 176079
||| || |||||| | | ||| ||||| |||||||| | || || || |||||||| ||
Sbjct 43836 ATCTTTGCCACCCGTCAAACGAGTACCGAACTGACCGCGTGGTTCCAGCAGATTGATGTT 43895
Query 176080 GTTTGAACCCATGTAGTCATTCGCCAACTTGACAATCGTG-TCCGCGAGAGAGACTTCAC 176138
||||| |||| ||| | || | || ||||| || || || | ||||| || |
Sbjct 43896 GTTTGCGCCCACAAAGTTCTGGGCGAGATTCACAATGGTCATCTGCAAC-GAGACCTCGC 43954
Query 176139 CGTGGTGGTACGCACTCTTCTCTGCGACAAATGCCGCCAACTGCGCCACTTTCATCTCAT 176198
|||||||||| || | |||| || || || | | | ||| || || |||| |||
Sbjct 43955 CGTGGTGGTAGGCGGACATCTCGGCCACCGATCCGGATAGCTGGGCGACCTTCACCTCGC 44014
Query 176199 CCTTGAGATTCTTGTGGAAACATGCGTACATAACCTTGCGTTGCGAAGGCTTGAGACCAT 176258
|||| ||| | | ||| || | | |||| |||||||| || ||||| || ||||
Sbjct 44015 GCTTGTCGTTCCTCTTGAAGCAGGTGAACATTACCTTGCGCTGACCCGGCTTAAGTCCAT 44074
Query 176259 CCGCCA 176264
|| |||
Sbjct 44075 CCACCA 44080
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620565340989680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |