Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20rhopaloa_20[refseq_20GCF_5F000236305.1_202013-02-22] 22,819 sequences; 197,375,704 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq8502 192 7e-44 seq1813 192 7e-44 seq8501 187 3e-42 seq22136 113 5e-20 seq20124 91.5 2e-13 >seq8502 Length=4749 Score = 192 bits (212), Expect = 7e-44 Identities = 892/1397 (64%), Gaps = 39/1397 (3%) Strand=Plus/Plus Query 105934 ATAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGA 105993 ||| |||||||| || ||||| || || |||| || || |||| ||||| || || || Sbjct 1541 ATAAATGTTCGTGGTATAGGGCTCGAAAGATTCGTTGTTTCCCATAATTTGAGCAGTAGA 1600 Query 105994 GGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTC 106053 || || ||||| || || | | || ||| || | ||| | | |||||| || Sbjct 1601 CGCAGTAGGCATAGGGGCAACAAGCAGGGAGTTCCGGACACCGTGCTTTTTGATGGACTC 1660 Query 106054 CTTGAGAACATCCCAGTCGTA-------GTTGAGCTTGGTTTCACCTTCCCACATATCAA 106106 ||| || | ||| || | |||| ||| |||| |||||||| || Sbjct 1661 CTTTAGTTTTTGCCAATCCCACAGGTTCGTTG-GCT--GTTTG----TCCCACATGTCGT 1713 Query 106107 ATTGAAGCACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTT 106166 | || || | |||| | | ||| |||||| | |||||||||| ||||| | | | Sbjct 1714 ACTGCAGAATTCCTTTGCTCACGGGGCTTCCCTCATAGGTCTCATAGGGACCTTCGACCT 1773 Query 106167 CAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCAT 106226 |||| ||||||||| || ||||||| ||| || || |||||||| || | || Sbjct 1774 GCGCCAGTTCACAGCTGGCTTCCAGGGCACCGTAGTAAATCGTTTCAAATATCTGCTGAT 1833 Query 106227 TCATCT---CCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCG 106283 ||| || |||||| || ||| ||| | | || | ||| || | || | Sbjct 1834 TCAAAAAGACC--GGCTTCTTCACTTTCATATGGGAATCGCATGAGAATCAAGGCGTCAG 1891 Query 106284 CGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCT 106343 ||| ||| |||||||| | || | || | |||| || ||| || || || ||| Sbjct 1892 CGAAACCCTGAACACCGATGCCCACGGGACGATGTCTCAAATTGGATTTCTTTGCC-TCT 1950 Query 106344 CA-ACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTG 106402 | ||||||||| || | ||||| | ||| |||||||||||||| |||| || Sbjct 1951 GGGAGGGGATAAAAGTTGATATCAATTATCTTGTTGAGATTTTTGGTAACCGTCTTGGTA 2010 Query 106403 ATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGG 106462 | ||| | |||||| | ||||||| | |||| ||||| || | ||| Sbjct 2011 ACTTCCTTAAGTTTCTGGAAATCAAATTT---TTTCTCGGGTGTGACAAACATGTTAAGA 2067 Query 106463 GCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCT 106522 ||||| ||||||| ||||| || || |||||||| | || || | |||||| Sbjct 2068 GCGATGGATGCCAGGTTGCACACTGCAATCTCATCCGGCGAGGAATATTCAACGATTTCT 2127 Query 106523 GTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCAC 106582 || ||||||||| | |||||| || || | |||| ||||| || || ||||||| Sbjct 2128 GTGCACAAGTTGCTGCACTTAATGGTGCCAACGTTCTGCTGGTTGCTTTTCCTGTTGCAG 2187 Query 106583 GCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTC 106642 ||||||||| ||||||| || || | || || ||| ||| |||| | ||| || | Sbjct 2188 GCATCCTTGAAGAGCATATACGGGTTGCCAGTTTCCACCTGCGACTCAATAATGGCAAAC 2247 Query 106643 CAC-ACATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTA 106701 ||| | | | | || | || | ||| || || ||||| |||||| || ||||| Sbjct 2248 CACAAGGACTGAGCCTTG-ACCGTTCGGTTCGCACGACCCTCTTGCTCGTATTTAGTGTA 2306 Query 106702 GAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAA 106761 || || || || || ||| | ||| || || || |||| || || | Sbjct 2307 CAGCTTCTCGAATTCATCGCCCCAGACATCGTGCAGGCCCGGGCATTTGTGCGGGCACAT 2366 Query 106762 AAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGA 106821 || ||||| | || |||| || || |||||||| || || || ||||| |||| Sbjct 2367 CAGCGACCAATTCTCATTGGCCTCGACGCGTTTCATGAAGAGATCGGGTATCCAAAGGGC 2426 Query 106822 TGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACC-TTGGTTGAGTCGTAACTCAAGGA 106880 |||| ||||| | ||| ||| || | || || || | | | || || | Sbjct 2427 GTAAAACAGATCGCGGGCGCGATTCTCCTCCTTGCCAGTGTTTTTCTTG-AGTTCCAGAA 2485 Query 106881 ACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC----CTTTCGA 106936 |||| | || ||||| |||||| ||||| || || | || | | || | | | Sbjct 2486 ACTCAAAGACATCCGAGTGCCAGGGCTCCAGGTAAATGGCAAAGGCACCGGGACGCTTGC 2545 Query 106937 CGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATA 106996 || ||| | |||| |||||||| || ||| || || | ||||| |||| | Sbjct 2546 CG-CCACCCTGATCCACATAGCGTGCCACATTGTTGAAGACCCTCAGCATGGGAACTAGG 2604 Query 106997 CCATCTGATTGACCATTTGTCCCCCGAATACGAGAT-TTATTGGCTCTCACATCATGGAT 107055 |||| || ||||| || || | |||| ||| | || || | | ||| | Sbjct 2605 CCATTGGAAGTGCCATTCGTGCCGCAAATA-GAGGTGCCTTTTGCCCGGATGCAATGAAC 2663 Query 107056 GTGCATCCCAATACCCCCAGCCCACTTTGAGAT--TTGCGCACACTCCGTAAGAGTTCCA 107113 | || ||||| || || ||| | || ||||| | ||||| | | || || | Sbjct 2664 ATTCAGTCCAATGCCACCTGCCGATTTCGAGATCATGGCGCAGTGTTCCACCGATTT--A 2721 Query 107114 TAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGT 107173 |||| || | ||| ||||| || | ||| | |||||| || |||| |||||| Sbjct 2722 AAGATGCCCTCGATCGAGTCAGCCGTCATGGTCAAAAGGAAACAGGAAGACAGCTGCGGG 2781 Query 107174 CTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGGGACATC 107233 | ||| |||| || || ||||| | |||||| |||| | | | |||| Sbjct 2782 CGATTTGTGGCAGCGGCAAAAAGCGTTGGCGATGCGTGGGTGAAGAATCGCTCAGACAAA 2841 Query 107234 TTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGC 107293 || ||| || |||| | | | |||||| || || || ||||| || || ||||| ||| Sbjct 2842 AGGTTGTAGGTTTCCACGGCCGCATCAATATCCTCTCCATGGATTCCTATTGCCACGCGC 2901 Query 107294 ATAAACATGTATTGGGG 107310 || ||||||| ||| || Sbjct 2902 ATCAACATGTGTTGCGG 2918 >seq1813 Length=4749 Score = 192 bits (212), Expect = 7e-44 Identities = 889/1394 (64%), Gaps = 34/1394 (2%) Strand=Plus/Plus Query 105934 ATAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGA 105993 ||| |||||||| || ||||| || || |||| || || |||| ||||| || || || Sbjct 1541 ATAAATGTTCGTGGTATAGGGCTCGAAAGATTCGTTGTTTCCCATAATTTGAGCAGTAGA 1600 Query 105994 GGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTC 106053 || || ||||| || || | | || ||| || | ||| | | |||||| || Sbjct 1601 CGCAGTAGGCATAGGGGCAACAAGCAGGGAGTTCCGGACACCGTGCTTTTTGATGGACTC 1660 Query 106054 CTTGAGAACATCCCAGTCGTA-------GTTGAGCTTGGTTTCACCTTCCCACATATCAA 106106 ||| || | ||| || | |||| ||| |||| |||||||| || Sbjct 1661 CTTTAGTTTTTGCCAATCCCACAGGTTCGTTG-GCT--GTTTG----TCCCACATGTCGT 1713 Query 106107 ATTGAAGCACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTT 106166 | || || | |||| | | ||| |||||| | |||||||||| ||||| | | | Sbjct 1714 ACTGCAGAATTCCTTTGCTCACGGGGCTTCCCTCATAGGTCTCATAGGGACCTTCGACCT 1773 Query 106167 CAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCAT 106226 |||| ||||||||| || ||||||| ||| || || |||||||| || | || Sbjct 1774 GCGCCAGTTCACAGCTGGCTTCCAGGGCACCGTAGTAAATCGTTTCAAATATCTGCTGAT 1833 Query 106227 TCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGA 106286 ||| ||| || || ||| ||| | | || | ||| || | || |||| Sbjct 1834 TCAAAAGACCGGCCTCTTCACTTTCATATGGGAATCGCATGAGAATCAAGGCGTCAGCGA 1893 Query 106287 GACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA- 106345 ||| |||||||| | || | || | |||| || ||| || || || ||| Sbjct 1894 AACCCTGAACACCGATGCCCACGGGACGATGTCTCAAATTGGATTTCTTTGCC-TCTGGG 1952 Query 106346 ACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATT 106405 | ||||||||| || | ||||| | ||| |||||||||||||| |||| || | | Sbjct 1953 AGGGGATAAAAGTTGATATCAATTATCTTGTTGAGATTTTTGGTAACCGTCTTGGTAACT 2012 Query 106406 TCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCG 106465 || | |||||| | ||||||| | |||| ||||| || | ||| ||| Sbjct 2013 TCCTTAAGTTTCTGGAAATCAAATTT---TTTCTCGGGTGTGACAAACATGTTAAGAGCG 2069 Query 106466 ATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTA 106525 || ||||||| ||||| || || |||||||| | || || | |||||||| Sbjct 2070 ATGGATGCCAGGTTGCACACTGCAATCTCATCCGGCGAGGAATATTCAACGATTTCTGTG 2129 Query 106526 CACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCA 106585 ||||||||| | |||||| || || | |||| ||||| || || ||||||| ||| Sbjct 2130 CACAAGTTGCTGCACTTAATGGTGCCAACGTTCTGCTGGTTGCTTTTCCTGTTGCAGGCA 2189 Query 106586 TCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCAC 106645 |||||| ||||||| || || | || || ||| ||| |||| | ||| || |||| Sbjct 2190 TCCTTGAAGAGCATATACGGGTTGCCAGTTTCCACCTGCGACTCAATAATGGCAAACCAC 2249 Query 106646 -ACATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAG 106704 | | | | || | || | ||| || || ||||| |||||| || ||||| || Sbjct 2250 AAGGACTGAGCCTTG-ACCGTTCGGTTCGCACGACCCTCTTGCTCGTATTTAGTGTACAG 2308 Query 106705 GGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAG 106764 || || || || ||| | ||| || || || |||| || || | || Sbjct 2309 CTTCTCGAATTCATCGCCCCAGACATCGTGCAGGCCCGGGCATTTGTGCGGGCACATCAG 2368 Query 106765 AGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGA 106824 ||||| | || |||| || || |||||||| || || || ||||| |||| | Sbjct 2369 CGACCAATTCTCATTGGCCTCGACGCGTTTCATGAAGAGATCGGGTATCCAAAGGGCGTA 2428 Query 106825 AAAGAGATCTCTACACCGAGCCTCTTCGTCACC-TTGGTTGAGTCGTAACTCAAGGAACT 106883 ||| ||||| | ||| ||| || | || || || | | | || || |||| Sbjct 2429 AAACAGATCGCGGGCGCGATTCTCCTCCTTGCCAGTGTTTTTCTTG-AGTTCCAGAAACT 2487 Query 106884 CCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC----CTTTCGACGC 106939 | | || ||||| |||||| ||||| || || | || | | || | | | || Sbjct 2488 CAAAGACATCCGAGTGCCAGGGCTCCAGGTAAATGGCAAAGGCACCGGGACGCTTGCCG- 2546 Query 106940 CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCA 106999 ||| | |||| |||||||| || ||| || || | ||||| |||| | ||| Sbjct 2547 CCACCCTGATCCACATAGCGTGCCACATTGTTGAAGACCCTCAGCATGGGAACTAGGCCA 2606 Query 107000 TCTGATTGACCATTTGTCCCCCGAATACGAGAT-TTATTGGCTCTCACATCATGGATGTG 107058 | || ||||| || || | |||| ||| | || || | | ||| | | Sbjct 2607 TTGGAAGTGCCATTCGTGCCGCAAATA-GAGGTGCCTTTTGCCCGGATGCAATGAACATT 2665 Query 107059 CATCCCAATACCCCCAGCCCACTTTGAGAT--TTGCGCACACTCCGTAAGAGTTCCATAG 107116 || ||||| || || ||| | || ||||| | ||||| | | || || | || Sbjct 2666 CAGTCCAATGCCACCTGCCGATTTCGAGATCATGGCGCAGTGTTCCACCGATTT--AAAG 2723 Query 107117 ATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTT 107176 || || | ||| ||||| || | ||| | |||||| || |||| |||||| | Sbjct 2724 ATGCCCTCGATCGAGTCAGCCGTCATGGTCAAAAGGAAACAGGAAGACAGCTGCGGGCGA 2783 Query 107177 GGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGGGACATCTTG 107236 ||| |||| || || ||||| | |||||| |||| | | | |||| | Sbjct 2784 TTTGTGGCAGCGGCAAAAAGCGTTGGCGATGCGTGGGTGAAGAATCGCTCAGACAAAAGG 2843 Query 107237 TCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATA 107296 | ||| || |||| | | | |||||| || || || ||||| || || ||||| ||||| Sbjct 2844 TTGTAGGTTTCCACGGCCGCATCAATATCCTCTCCATGGATTCCTATTGCCACGCGCATC 2903 Query 107297 AACATGTATTGGGG 107310 ||||||| ||| || Sbjct 2904 AACATGTGTTGCGG 2917 >seq8501 Length=20033 Score = 187 bits (206), Expect = 3e-42 Identities = 892/1397 (64%), Gaps = 38/1397 (3%) Strand=Plus/Minus Query 105934 ATAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGA 105993 ||| |||||||| || ||||| || || |||| || || |||| ||||| || || || Sbjct 2415 ATAAATGTTCGTGGTATAGGGCTCGAAAGATTCGTTGTTTCCCATAATTTGAGCAGTAGA 2356 Query 105994 GGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTC 106053 || || ||||| || || | | || ||| || | ||| | | |||||| || Sbjct 2355 CGCAGTAGGCATAGGGGCAACAAGCAGGGAGTTCCGGACACCGTGCTTTTTGATGGACTC 2296 Query 106054 CTTGAGAACATCCCAGTCGTA-------GTTGAGCTTGGTTTCACCTTCCCACATATCAA 106106 ||| || | ||| || | |||| ||| |||| |||||||| || Sbjct 2295 CTTTAGTTTTTGCCAATCCCACAGGTTCGTTG-GCT--GTTTG----TCCCACATGTCGT 2243 Query 106107 ATTGA-AGCACCCCTTGGG--ACGTGGGAGAACCCTCAAATGT-CTCATAGGAACCTTGG 106162 | || || | |||| | ||| ||| ||||||| | || |||||||| ||||| | Sbjct 2242 ACTGCTAGAATTCCTTTGCTCACG-GGGCTTACCCTCATAGGTACTCATAGGGACCTTCG 2184 Query 106163 GCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGA 106222 | | |||| ||||||||| || ||||||| ||| || || |||||||| || | Sbjct 2183 ACCTGCGCCAGTTCACAGCTGGCTTCCAGGGCACCGTAGTAAATCGTTTCAAATATCTGC 2124 Query 106223 GCATTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCC 106282 ||||| |||||| || ||| ||| | | || | ||| || | || Sbjct 2123 TGATTCAAAAGACCGGCTTCTTCACTTTCATATGGGAATCGCATGAGAATCAAGGCGTCA 2064 Query 106283 GCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTC 106342 |||| ||| |||||||| | || | || | |||| || ||| || || || || Sbjct 2063 GCGAAACCCTGAACACCGATGCCCACGGGACGATGTCTCAAATTGGATTTCTTTGCC-TC 2005 Query 106343 TCA-ACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGT 106401 | | ||||||||| || | ||||| | ||| |||||||||||||| |||| || Sbjct 2004 TGGGAGGGGATAAAAGTTGATATCAATTATCTTGTTGAGATTTTTGGTAACCGTCTTGGT 1945 Query 106402 GATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAG 106461 | ||| | |||||| | ||||||| | |||| ||||| || | ||| Sbjct 1944 AACTTCCTTAAGTTTCTGGAAATCAAATTT---TTTCTCGGGTGTGACAAACATGTTAAG 1888 Query 106462 GGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTC 106521 ||||| ||||||| ||||| || || |||||||| | || || | ||||| Sbjct 1887 AGCGATGGATGCCAGGTTGCACACTGCAATCTCATCCGGCGAGGAATATTCAACGATTTC 1828 Query 106522 TGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCA 106581 ||| ||||||||| | |||||| || || | |||| ||||| || || ||||||| Sbjct 1827 TGTGCACAAGTTGCTGCACTTAATGGTGCCAACGTTCTGCTGGTTGCTTTTCCTGTTGCA 1768 Query 106582 CGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTT 106641 ||||||||| ||||||| || || | || || ||| ||| |||| | ||| || Sbjct 1767 GGCATCCTTGAAGAGCATATACGGGTTGCCAGTTTCCACCTGCGACTCAATAATGGCAAA 1708 Query 106642 CCAC-ACATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGT 106700 |||| | | | | || | || | ||| || || ||||| |||||| || |||| Sbjct 1707 CCACAAGGACTGAGCCTTG-ACCGTTCGGTTCGCACGACCCTCTTGCTCGTATTTAGTGT 1649 Query 106701 AGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGA 106760 | || || || || || ||| | ||| || || || |||| || || | Sbjct 1648 ACAGCTTCTCGAATTCATCGCCCCAGACATCGTGCAGGCCCGGGCATTTGTGCGGGCACA 1589 Query 106761 AAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGG 106820 || ||||| | || |||| || || |||||||| || || || ||||| |||| Sbjct 1588 TCAGCGACCAATTCTCATTGGCCTCGACGCGTTTCATGAAGAGATCGGGTATCCAAAGGG 1529 Query 106821 ATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGA 106880 |||| ||||| | ||| ||| || | || ||| || | || || | Sbjct 1528 CGTAAAACAGATCGCGGGCGCGATTCTCCTCCTTGCCAGTGTT-TTTCTGAGTTCCAGAA 1470 Query 106881 ACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC----CTTTCGA 106936 |||| | || ||||| |||||| ||||| || || | || | | || | | | Sbjct 1469 ACTCAAAGACATCCGAGTGCCAGGGCTCCAGGTAAATGGCAAAGGCACCGGGACGCTTGC 1410 Query 106937 CGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATA 106996 || ||| | |||| |||||||| || ||| || || | ||||| |||| | Sbjct 1409 CG-CCACCCTGATCCACATAGCGTGCCACATTGTTGAAGACCCTCAGCATGGGAACTAGG 1351 Query 106997 CCATCTGATTGACCATTTGTCCCCCGAATACGAGAT-TTATTGGCTCTCACATCATGGAT 107055 |||| || ||||| || || | |||| ||| | || || | | ||| | Sbjct 1350 CCATTGGAAGTGCCATTCGTGCCGCAAATA-GAGGTGCCTTTTGCCCGGATGCAATGAAC 1292 Query 107056 GTGCATCCCAATACCCCCAGCCCACTTTGAGAT--TTGCGCACACTCCGTAAGAGTTCCA 107113 | || ||||| || || ||| | || ||||| | ||||| | | || || | Sbjct 1291 ATTCAGTCCAATGCCACCTGCCGATTTCGAGATCATGGCGCAGTGTTCCACCGATTT--A 1234 Query 107114 TAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGT 107173 |||| || | ||| ||||| || | ||| | |||||| || |||| |||||| Sbjct 1233 AAGATGCCCTCGATCGAGTCAGCCGTCATGGTCAAAAGGAAACAGGAAGACAGCTGCGGG 1174 Query 107174 CTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGGGACATC 107233 | ||| |||| || || ||||| | |||||| |||| | | | |||| Sbjct 1173 CGATTTGTGGCAGCGGCAAAAAGCGTTGGCGATGCGTGGGTGAAGAATCGCTCAGACAAA 1114 Query 107234 TTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGC 107293 || ||| || |||| | | | |||||| || || || ||||| || || ||||| ||| Sbjct 1113 AGGTTGTAGGTTTCCACGGCCGCATCAATATCCTCTCCATGGATTCCTATTGCCACGCGC 1054 Query 107294 ATAAACATGTATTGGGG 107310 || ||||||| ||| || Sbjct 1053 ATCAACATGTGTTGCGG 1037 >seq22136 Length=515022 Score = 113 bits (124), Expect = 5e-20 Identities = 284/432 (66%), Gaps = 0/432 (0%) Strand=Plus/Plus Query 117000 CTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATAAAGTCAAATGGATT 117059 |||||| |||||||||||||| || || ||| || | ||||| |||| || || || Sbjct 289651 CTTCTCGAAGAAGTTGGTCTTGCCGTCCAGGGAGATCATCTCCATGAAGTTGAACGGGTT 289710 Query 117060 CTTCGCGTTCCAAATGGGTGGCACCCCAACTTGTTTGAGGAGACGATCCGACACATACTC 117119 ||| | ||| | || | || || | || || | ||| |||| ||| |||| Sbjct 289711 CTTGGTGTTGTAGATCTTTCCAACGCCCAATTCCACCAGCAAACGGTCCGCCACGAACTC 289770 Query 117120 AATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGATTACATGGGAGTGCGTCCAA 117179 |||||||| ||||| || ||||||| || || || || || || || || Sbjct 289771 AATGTACTGCGACATGAGGTCGCAGTTCATGCCAATAAGGTTTACGGGCAGGGCATCGGT 289830 Query 117180 GATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATGGCGTGGATAGTTTCGGTAGT 117239 || |||| | | |||||| | ||||| || | ||| || ||| ||| | Sbjct 289831 GAGGAACTCCTGCTCAATGGCCACCGCATCACGGATGATCTCGATGATGCGCTCGCGCCT 289890 Query 117240 GGGTCTATTACGCAAAGTCTTGAAGAGCTCCACGGCAAACTCCTGGTGGAGACCCTCATC 117299 ||||| | | || | || ||| | | |||||| || || ||| | ||||| || Sbjct 289891 GGGTCGCTGAACCAGATGCTGGAACATCAGCACGGCGAAGTCACAGTGCAATCCCTCGTC 289950 Query 117300 TCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACCCCGCTTCTTCAACCA 117359 ||||| || ||||| || |||||| ||||| ||||| | ||| || ||||| | ||| Sbjct 289951 CCGGGAGATCAGTTCGTTGGAGAAGGTCAGGCCCGGCATCAAACCGCGTTTCTTTAGCCA 290010 Query 117360 ATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGCAAACGCAAAAAG 117419 |||| | | ||| ||| ||||||||| |||||||| ||||| || | | Sbjct 290011 GAAAATGGAGGCGAAACTGCCGCTGAAGAAGATGCCCTCCACGGCGGCAAAGGCGATGAT 290070 Query 117420 GCGCTCGGCGAA 117431 |||||| |||| Sbjct 290071 GCGCTCCCCGAA 290082 >seq20124 Length=133112 Score = 91.5 bits (100), Expect = 2e-13 Identities = 180/264 (68%), Gaps = 2/264 (1%) Strand=Plus/Plus Query 168470 ATCCTTACCACCCATGAGACGCGTACCAAATTGACCACACGGTTCAAGAAGGTTAATGTT 168529 ||| || |||||| | | ||| ||||| || ||||| | ||||| || || || ||||| Sbjct 43836 ATCTTTGCCACCCGTCAAACGAGTACCGAACTGACCGCGTGGTTCCAGCAGATTGATGTT 43895 Query 168530 GTTTGAACCCGTGTAGTCGTTTGCCAACTTAACAATCGTG-TCCGCTAAGGATACTTCAC 168588 ||||| ||| ||| | || | || ||||| || || || || || || || | Sbjct 43896 GTTTGCGCCCACAAAGTTCTGGGCGAGATTCACAATGGTCATCTGC-AACGAGACCTCGC 43954 Query 168589 CATGGTGGTACGCAGACTTGTCCGCGACATATGCCGCCAGTTGTGCCACCTTCATTTCAT 168648 | |||||||| || ||| | || || || || | | || || || ||||||| || Sbjct 43955 CGTGGTGGTAGGCGGACATCTCGGCCACCGATCCGGATAGCTGGGCGACCTTCACCTCGC 44014 Query 168649 CCTTGAGATTCTTATGGAAGCAAGCATACATCACTTTCCTCTGTGAAGGCTTGAGACCAT 168708 |||| ||| | | |||||| | |||| || || | ||| ||||| || |||| Sbjct 44015 GCTTGTCGTTCCTCTTGAAGCAGGTGAACATTACCTTGCGCTGACCCGGCTTAAGTCCAT 44074 Query 168709 CCGCCATATGGGCAATAGAGCGCT 168732 || ||| | || ||||||||||| Sbjct 44075 CCACCAGACTGGGAATAGAGCGCT 44098 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589812515351560