Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20rhopaloa_20[refseq_20GCF_5F000236305.1_202013-02-22] 22,819 sequences; 197,375,704 total letters Query= NC_014969.1 Length=44055 Score E Sequences producing significant alignments: (Bits) Value seq22465 84.2 6e-12 >seq22465 Length=63631 Score = 84.2 bits (92), Expect = 6e-12 Identities = 169/251 (67%), Gaps = 0/251 (0%) Strand=Plus/Plus Query 1038 TACGGCCGCATCGCCCCTCGTTCGGGTCTGGCCGTCAAGTTTTTTATAGACGTGGGTGCC 1097 |||||||| | ||||| || || || |||||||| ||| || || || ||||| ||| Sbjct 17240 TACGGCCGTGTGGCCCCACGGTCCGGACTGGCCGTGAAGAACTTCATCGATGTGGGCGCC 17299 Query 1098 GGGGTGGTGGATAGCGATTACCGCGGTATCGTGTCGGTGCTGCTGTTTAACTTTTCGGAG 1157 || ||||||||| ||||||||||| | | | || | ||||| || ||||| Sbjct 17300 GGTGTGGTGGATGAGGATTACCGCGGCAACCTCGGCGTCGTTCTGTTCAATCACTCGGAC 17359 Query 1158 CACAATTTTAACGTGCGCCGAGGTGACCGCATCGCCCAGATGATTTTGGAGCGTCACCTC 1217 | ||| | ||| || || ||||||||||| || | |||| ||||| | || Sbjct 17360 GTGGAGTTTGAGGTGAAGCGCGGCGACCGCATCGCTCAATTCATTTGCGAGCGCATCTTC 17419 Query 1218 ACCCCGGATCTGGAAGAGCGCTTCGCTCTCGATCAGACGGAACGCGGCTCCGGGGGTTTC 1277 ||||| ||||| | | | || || | || ||||||||| || || ||| Sbjct 17420 TATCCGGAACTGGAGCTGGTCGACAAACTGGAGGACACCGAACGCGGCGAGGGAGGATTC 17479 Query 1278 GGGTCCACGGG 1288 || |||||||| Sbjct 17480 GGTTCCACGGG 17490 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 140816231890926